Spo20527.1 (mRNA)

Overview
NameSpo20527.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
LocationSpoScf_04992 : 1216 .. 3860 (+)
Sequence length816
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCATAAGCAACACTCTATATCCCACAATGACAACCCTTCCAACCTTCTCCCACACAACATCTTCATCCAATCCTCAATCACTACCATTTCCAGTCACACTCACTTCCAAGCCATTTATAAATAATCATTCACAACTTTCTCTCTCTTCAATCTCTCTCTCAAGAAGGATTTTCCTTCCTTCAGTTTCAGGCATTTGGGATGCTTTAACTGGTGGCTCCAACTACAATCCCCGTGAAGCTGCTCTTGCCATTCGCCGCGGTATGCAGCTTTTTAGACAGGTATGTTGCATATACAGGAGCACGCACAGTTGTCCCACATTGAAGAAAAATATCCATTCGTATATATTCATTTATTCAGTTAATTTTAGTGAACAGTGGGATGTTAGTAGAATGTTGATTGATACTCTCTCCATTCTATATTAATTACTTTACATTAGTCAAATCTCATGTATTAATTACTATAGCATGGAAAGAGTATTGTTCTGCTACATTTTGATTTTTTTTTTTTTTTTTCCTTTCTTTTTTGGTTATTAATGTTTTAAATTTTTATTTTTTTTTCTTTCTATTTTGGTTATTAATGTTTTAAATTTATTGGTTATGTTGATTTGTGAAGGGTGATATTATTGGGTCTGTTGCTGAATTTGACAAGGCAGTTGAGCTTGATCCACGTCAAAAGGCATGTATGTCGTTCAATTGGAATTTAACTAGTTTTCTATCTGTAATTATATAAAAGATTTCTATTAATAACTTTGTCAATGTGGGAATCATTTAGATCTTTGGCAAAGAGGACTGTCTCTATACTATCTAGACAGGTATTACCTGCTTAACATAAATCCTTATTTTGTATACAGAAACGTGTTCTTCTAATATCAATATGATAGCTAAATGATGATTATGAAAAAATTCTGTTAGCGGTAAGCTTTGCGCTTGTGGAATATATGCATTAGTGTAACACACTAACACCATATAGTCATGTTATTTTCTTACTTACACTTAAACTTTAGGGGGTAAATTATGGCAATATAAAGAAAGAAATGCAGAATTAAATATGTAATATTAGTGCATTTGGTGTACTCTTGGGGTGACTTTTGAGGTATATTAAATGCTTTTGGTAGGTTTGAAGAAGGAGCGGAGCAATTCAGGCTAGATGTTGCTCAGAATCCAAATGACACAGAGGAGTCTATTTGGTGTTTCCTTTGTGAAGCTCTGCTTTATGGGGTTGACGAAGCTAGGAAACGATTTCTTGTGGTTAGTCTATGAACACTGCTGTTTTAATTTCCTTGATCAATGTAATCGTGTGTTTTCTTGATGCAAAACAGAAAGCATCCCCAATTATGTTTACTGTGTCTGTTTCCTAGAAAAGAGTAACAGATTTCTTAAAAACCTTGCTTTCGGGCATTTTCTCAGGTTGGTAGAGATCCAAGACCGGTGATGCGTCAAGCCTACGAAATGTTCAGAGATGGTGGTGATCCTCAAAAGGTGCTAACTACAGTTTACTTAATGTAGCTATTTCATCTTGATGTTTGCCAATAGCTAAGATTGTCCTGGAACATTAACATTATTGTTACTTGTCATATCATTACTAAAATAAGATCACTTGCTTACCCTAATATTAGGCTGCATTATGTTTCCCCCATCAAGCTGTTTGTGTAATTTCTTCTTGGTAACTGGTTATGTGAACATCGTCAGAACGGCTTGCTTGATATTCCTGCATGTCATCAGTTCATCACTCCGTAGAGCTAGATCGAAGGTAACTTCAGAGCTTGGAATTTCAGAGGTACAGACTTTCAGGAGTTGTGTAAGATCAGAAATTTGAAGGGAGAGCAAAAAAAGAATTGGAATGTATTCCAGTTAAGAACTTAAGATTTTAAATTGGCGATGTATACACTACTCTTAGAAAAGAAACATGGAAACTGAACTCATAAGTACCTGCTAGGACAGTTCATTAAAAAATCAGGGTGGTGCATAACTACAAATCTTTGTTTAGTCCCGAAAGACATTTCTAAAGTCCTTCAAGTCTGGTGCAATTATTAGAGATTAACAACTTATTTTGTTACTGTCTTGGTAATACTCAGGGTGGTGCTTTATTCAGATTGGTGGAAGATAGATATGTGATCGGATTGTGTTCTTGTCTAATACACTAATTGTTGGTTTCTTTCTTTAAAGCTGGCTGATACATTCTCAAGCAGTCGAGATGGTGAATACTTCTATGCATTTCTGTATGCTGGCCTCTATCACGAAGCACTGGTATCAAAATCCCTTTATACTCTTGTCATTCCTTCACAAAAACTCAGGACATTTTCAACTTTACGACAGTGAAATGTCCATGTTTTCTGTACACGCATTTCATGTGTGATTGATTTCGTTGCTTGTACCAGTCTCATAACTAACTCAGCTAAGTTTCTGATTGTGTAGGGTGAAGAAGAAGCTGCTAAGAATTATATTGTTGCTGCATGCCAATCCCCTTATGCACAAAGGTTTAGCACCAAAACCCTGAATTACTTATATATGGACTGCTTTCTTTATATGTCATGTAAGTTACTTAATAAAATCTTCATTTCAGGTCTGACGATTACATGGCTTCTTTAGCCAAGGTCCACTGTATCTGTAGAAACTGGAGCTTAAATCAAACATCAACATGA

mRNA sequence

ATGGGCATAAGCAACACTCTATATCCCACAATGACAACCCTTCCAACCTTCTCCCACACAACATCTTCATCCAATCCTCAATCACTACCATTTCCAGTCACACTCACTTCCAAGCCATTTATAAATAATCATTCACAACTTTCTCTCTCTTCAATCTCTCTCTCAAGAAGGATTTTCCTTCCTTCAGTTTCAGGCATTTGGGATGCTTTAACTGGTGGCTCCAACTACAATCCCCGTGAAGCTGCTCTTGCCATTCGCCGCGGTATGCAGCTTTTTAGACAGGGTGATATTATTGGGTCTGTTGCTGAATTTGACAAGGCAGTTGAGCTTGATCCACGTCAAAAGGCATATCTTTGGCAAAGAGGACTGTCTCTATACTATCTAGACAGGTTTGAAGAAGGAGCGGAGCAATTCAGGCTAGATGTTGCTCAGAATCCAAATGACACAGAGGAGTCTATTTGGTGTTTCCTTTGTGAAGCTCTGCTTTATGGGGTTGACGAAGCTAGGAAACGATTTCTTGTGGTTGGTAGAGATCCAAGACCGGTGATGCGTCAAGCCTACGAAATGTTCAGAGATGGTGGTGATCCTCAAAAGCTGGCTGATACATTCTCAAGCAGTCGAGATGGTGAATACTTCTATGCATTTCTGTATGCTGGCCTCTATCACGAAGCACTGGGTGAAGAAGAAGCTGCTAAGAATTATATTGTTGCTGCATGCCAATCCCCTTATGCACAAAGGTCTGACGATTACATGGCTTCTTTAGCCAAGGTCCACTGTATCTGTAGAAACTGGAGCTTAAATCAAACATCAACATGA

Coding sequence (CDS)

ATGGGCATAAGCAACACTCTATATCCCACAATGACAACCCTTCCAACCTTCTCCCACACAACATCTTCATCCAATCCTCAATCACTACCATTTCCAGTCACACTCACTTCCAAGCCATTTATAAATAATCATTCACAACTTTCTCTCTCTTCAATCTCTCTCTCAAGAAGGATTTTCCTTCCTTCAGTTTCAGGCATTTGGGATGCTTTAACTGGTGGCTCCAACTACAATCCCCGTGAAGCTGCTCTTGCCATTCGCCGCGGTATGCAGCTTTTTAGACAGGGTGATATTATTGGGTCTGTTGCTGAATTTGACAAGGCAGTTGAGCTTGATCCACGTCAAAAGGCATATCTTTGGCAAAGAGGACTGTCTCTATACTATCTAGACAGGTTTGAAGAAGGAGCGGAGCAATTCAGGCTAGATGTTGCTCAGAATCCAAATGACACAGAGGAGTCTATTTGGTGTTTCCTTTGTGAAGCTCTGCTTTATGGGGTTGACGAAGCTAGGAAACGATTTCTTGTGGTTGGTAGAGATCCAAGACCGGTGATGCGTCAAGCCTACGAAATGTTCAGAGATGGTGGTGATCCTCAAAAGCTGGCTGATACATTCTCAAGCAGTCGAGATGGTGAATACTTCTATGCATTTCTGTATGCTGGCCTCTATCACGAAGCACTGGGTGAAGAAGAAGCTGCTAAGAATTATATTGTTGCTGCATGCCAATCCCCTTATGCACAAAGGTCTGACGATTACATGGCTTCTTTAGCCAAGGTCCACTGTATCTGTAGAAACTGGAGCTTAAATCAAACATCAACATGA

Protein sequence

MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFLPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPRPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQSPYAQRSDDYMASLAKVHCICRNWSLNQTST
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo20527Spo20527gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo20527.1Spo20527.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20527.1.exon.1Spo20527.1.exon.1exon
Spo20527.1.exon.2Spo20527.1.exon.2exon
Spo20527.1.exon.3Spo20527.1.exon.3exon
Spo20527.1.exon.4Spo20527.1.exon.4exon
Spo20527.1.exon.5Spo20527.1.exon.5exon
Spo20527.1.exon.6Spo20527.1.exon.6exon
Spo20527.1.exon.7Spo20527.1.exon.7exon
Spo20527.1.exon.8Spo20527.1.exon.8exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20527.1.CDS.1Spo20527.1.CDS.1CDS
Spo20527.1.CDS.2Spo20527.1.CDS.2CDS
Spo20527.1.CDS.3Spo20527.1.CDS.3CDS
Spo20527.1.CDS.4Spo20527.1.CDS.4CDS
Spo20527.1.CDS.5Spo20527.1.CDS.5CDS
Spo20527.1.CDS.6Spo20527.1.CDS.6CDS
Spo20527.1.CDS.7Spo20527.1.CDS.7CDS
Spo20527.1.CDS.8Spo20527.1.CDS.8CDS


Homology
[Close]
BLAST of Spo20527.1 vs. NCBI nr
Match: gi|902193012|gb|KNA12179.1| (hypothetical protein SOVF_127800 [Spinacia oleracea])

HSP 1 Score: 550.4 bits (1417), Expect = 1.700e-153
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60
           MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL
Sbjct: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60

Query: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120
           PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ
Sbjct: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180

Query: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240
           PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ
Sbjct: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240

Query: 241 SPYAQRSDDYMASLAKVHCICRNWSLNQTST 272
           SPYAQRSDDYMASLAKVHCICRNWSLNQTST
Sbjct: 241 SPYAQRSDDYMASLAKVHCICRNWSLNQTST 271
[Close]
BLAST of Spo20527.1 vs. NCBI nr
Match: gi|731326571|ref|XP_010674087.1| (PREDICTED: uncharacterized protein LOC104890342 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 443.4 bits (1139), Expect = 2.900e-121
Identity = 222/271 (81.92%), Postives = 239/271 (88.19%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60
           M IS+T  PT+ TLP FSHTTS  N QS PFPV+L  KP IN       S +S+SRRIFL
Sbjct: 1   MSISSTFSPTIKTLPIFSHTTSI-NSQS-PFPVSLIFKPSIN------YSQLSISRRIFL 60

Query: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120
           PSVSGIWDALTGG+N N REA LAIRRGM LFRQGD++GSVAEFDKA+ELD RQKAYLWQ
Sbjct: 61  PSVSGIWDALTGGTNNNSREAGLAIRRGMLLFRQGDVMGSVAEFDKAIELDSRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEA LYGVD+AR +FL VGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEARLYGVDKARDQFLEVGRDPR 180

Query: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240
           PVMRQ YEMF+DGGDP+KL DTFSSSRDGEYFYA+LYAGLYHEALGEEEAAKNY+VAACQ
Sbjct: 181 PVMRQVYEMFKDGGDPRKLVDTFSSSRDGEYFYAYLYAGLYHEALGEEEAAKNYLVAACQ 240

Query: 241 SPYAQRSDDYMASLAKVHCICRNWSLNQTST 272
           SPYA+RSDDYMASLAKVHC CRNWS +QTST
Sbjct: 241 SPYAERSDDYMASLAKVHCKCRNWSFSQTST 263
[Close]
BLAST of Spo20527.1 vs. NCBI nr
Match: gi|449454057|ref|XP_004144772.1| (PREDICTED: uncharacterized protein LOC101209381 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 7.500e-101
Identity = 188/271 (69.37%), Postives = 220/271 (81.18%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSS----SNPQSLPFPVTLTSKPFINNHSQLSLSSISLSR 60
           + +S++L+ + T  P+F+++T +     +P SLP  +TL   P            +SLSR
Sbjct: 11  ISVSHSLHKSFTA-PSFTNSTKTIEVFHSPSSLPMRITLNHVP-----------PLSLSR 70

Query: 61  RIFLPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKA 120
           R+F+PSVSGIWDALTGG+N  PR+A  AIRRGM LFRQGD++GS+AEFDKA+ELDPRQKA
Sbjct: 71  RLFVPSVSGIWDALTGGNN--PRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKA 130

Query: 121 YLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVG 180
           YLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEA LYGVDEAR+RFL VG
Sbjct: 131 YLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVG 190

Query: 181 RDPRPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIV 240
           RDPRPVMR+AY MF+DGG P+KL   FSS R+ EYFYA LYAGLYHEA  + +AAK  IV
Sbjct: 191 RDPRPVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQDIV 250

Query: 241 AACQSPYAQRSDDYMASLAKVHCICRNWSLN 268
           AACQS YAQRSDDYMA+LAKVHC+CRNWS +
Sbjct: 251 AACQSTYAQRSDDYMAALAKVHCLCRNWSFS 267
[Close]
BLAST of Spo20527.1 vs. NCBI nr
Match: gi|729458810|ref|XP_010524857.1| (PREDICTED: uncharacterized protein LOC104802790 [Tarenaya hassleriana])

HSP 1 Score: 372.5 bits (955), Expect = 6.400e-100
Identity = 185/266 (69.55%), Postives = 211/266 (79.32%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60
           M ++  L P + T P FS       P  LPF    T  P  + H  L+      SRR+FL
Sbjct: 1   MALTQNLKPIIYTSPPFSRPL----PALLPFQ---TLNPQFSRHPPLTF-----SRRLFL 60

Query: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120
           PSVS IWDA+TGG N +PREA  AIRRGM LFRQGD+ GS+AEFD+A+ELDPRQKAYLWQ
Sbjct: 61  PSVSSIWDAITGGGNSDPREAVAAIRRGMLLFRQGDVSGSLAEFDRAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEA LYGVDEARK+FL VGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEARLYGVDEARKQFLEVGRDPR 180

Query: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240
           PVMR+AY MF++GGDP+KL + FSS +  EYFYA LY+GLY+EA G+ E AK++I AAC+
Sbjct: 181 PVMREAYNMFKNGGDPEKLVNIFSSGQANEYFYASLYSGLYYEAEGKPEEAKSHITAACE 240

Query: 241 SPYAQRSDDYMASLAKVHCICRNWSL 267
           SPY QRSDDYMASLAKVHC+CRNWSL
Sbjct: 241 SPYGQRSDDYMASLAKVHCLCRNWSL 254
[Close]
BLAST of Spo20527.1 vs. NCBI nr
Match: gi|965608598|dbj|BAT95089.1| (hypothetical protein VIGAN_08175300 [Vigna angularis var. angularis])

HSP 1 Score: 368.6 bits (945), Expect = 9.200e-99
Identity = 186/268 (69.40%), Postives = 212/268 (79.10%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSK-PFINNHSQLSLSSISLSRRIF 60
           M IS+ L P++   P+  H++S        FP+ L+SK PF   H       ++L+RR+F
Sbjct: 5   MSISHNLKPSILVSPSLHHSSS--------FPILLSSKQPFSLTHP------LNLTRRLF 64

Query: 61  LPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLW 120
           LPSVSGIWDALTG SN N REA LAIRRGM LFRQGD+ GS+ EFDKA++LDPRQKAYLW
Sbjct: 65  LPSVSGIWDALTGASN-NAREAVLAIRRGMSLFRQGDVSGSLVEFDKAIQLDPRQKAYLW 124

Query: 121 QRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDP 180
           QRGLSLYYL+RFEEGAEQFR DVAQNPNDTEESIWCFLCEA LYGVDEARKRFL VG DP
Sbjct: 125 QRGLSLYYLNRFEEGAEQFRFDVAQNPNDTEESIWCFLCEAQLYGVDEARKRFLEVGIDP 184

Query: 181 RPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAAC 240
           RPVMR+AY MF+DGGDP+KL   FS  RD EYFYA LYAGLY+E+  E +AAK +IVAAC
Sbjct: 185 RPVMREAYNMFKDGGDPEKLVAAFSGGRDSEYFYASLYAGLYYESQNEIDAAKVHIVAAC 244

Query: 241 QSPYAQRSDDYMASLAKVHCICRNWSLN 268
           QS Y QRSDDYMA+L+KVHC CRNW  N
Sbjct: 245 QSSYGQRSDDYMAALSKVHCQCRNWVFN 257
[Close]
BLAST of Spo20527.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QY30_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127800 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 1.200e-153
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60
           MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL
Sbjct: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60

Query: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120
           PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ
Sbjct: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180

Query: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240
           PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ
Sbjct: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240

Query: 241 SPYAQRSDDYMASLAKVHCICRNWSLNQTST 272
           SPYAQRSDDYMASLAKVHCICRNWSLNQTST
Sbjct: 241 SPYAQRSDDYMASLAKVHCICRNWSLNQTST 271
[Close]
BLAST of Spo20527.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CKI9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076160 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.100e-121
Identity = 222/271 (81.92%), Postives = 239/271 (88.19%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSISLSRRIFL 60
           M IS+T  PT+ TLP FSHTTS  N QS PFPV+L  KP IN       S +S+SRRIFL
Sbjct: 1   MSISSTFSPTIKTLPIFSHTTSI-NSQS-PFPVSLIFKPSIN------YSQLSISRRIFL 60

Query: 61  PSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLWQ 120
           PSVSGIWDALTGG+N N REA LAIRRGM LFRQGD++GSVAEFDKA+ELD RQKAYLWQ
Sbjct: 61  PSVSGIWDALTGGTNNNSREAGLAIRRGMLLFRQGDVMGSVAEFDKAIELDSRQKAYLWQ 120

Query: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDPR 180
           RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEA LYGVD+AR +FL VGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEARLYGVDKARDQFLEVGRDPR 180

Query: 181 PVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAACQ 240
           PVMRQ YEMF+DGGDP+KL DTFSSSRDGEYFYA+LYAGLYHEALGEEEAAKNY+VAACQ
Sbjct: 181 PVMRQVYEMFKDGGDPRKLVDTFSSSRDGEYFYAYLYAGLYHEALGEEEAAKNYLVAACQ 240

Query: 241 SPYAQRSDDYMASLAKVHCICRNWSLNQTST 272
           SPYA+RSDDYMASLAKVHC CRNWS +QTST
Sbjct: 241 SPYAERSDDYMASLAKVHCKCRNWSFSQTST 263
[Close]
BLAST of Spo20527.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LGH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G032740 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.300e-101
Identity = 188/271 (69.37%), Postives = 220/271 (81.18%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSS----SNPQSLPFPVTLTSKPFINNHSQLSLSSISLSR 60
           + +S++L+ + T  P+F+++T +     +P SLP  +TL   P            +SLSR
Sbjct: 11  ISVSHSLHKSFTA-PSFTNSTKTIEVFHSPSSLPMRITLNHVP-----------PLSLSR 70

Query: 61  RIFLPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKA 120
           R+F+PSVSGIWDALTGG+N  PR+A  AIRRGM LFRQGD++GS+AEFDKA+ELDPRQKA
Sbjct: 71  RLFVPSVSGIWDALTGGNN--PRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKA 130

Query: 121 YLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVG 180
           YLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEA LYGVDEAR+RFL VG
Sbjct: 131 YLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVG 190

Query: 181 RDPRPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIV 240
           RDPRPVMR+AY MF+DGG P+KL   FSS R+ EYFYA LYAGLYHEA  + +AAK  IV
Sbjct: 191 RDPRPVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQDIV 250

Query: 241 AACQSPYAQRSDDYMASLAKVHCICRNWSLN 268
           AACQS YAQRSDDYMA+LAKVHC+CRNWS +
Sbjct: 251 AACQSTYAQRSDDYMAALAKVHCLCRNWSFS 267
[Close]
BLAST of Spo20527.1 vs. UniProtKB/TrEMBL
Match: B9I7A8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s01390g PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 6.400e-99
Identity = 181/266 (68.05%), Postives = 215/266 (80.83%), Query Frame = 1 

		  

Query: 5   NTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSKPFINNHSQLSLSSI-----SLSRRIF 64
           N ++PT ++     H+ +++ P S   P T T+  F + +    + ++     + +RR+F
Sbjct: 8   NHIFPTPSSSSKHKHSLTTTLPFS---PKTHTNSHFFSTNIPSRIHNLQNPLPTFTRRLF 67

Query: 65  LPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLW 124
           LPSVSGIWDALTGG+N NPREA +AIRRGM LFRQGD++GS+ EFDKA+ELD RQKAYLW
Sbjct: 68  LPSVSGIWDALTGGNN-NPREAVMAIRRGMLLFRQGDVLGSLVEFDKAIELDTRQKAYLW 127

Query: 125 QRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDP 184
           QRGLSLYY+DRFEEGA+QFR+DVAQNPNDTEESIWCFLCEA LYGVDEARKRFL VGRDP
Sbjct: 128 QRGLSLYYVDRFEEGAQQFRIDVAQNPNDTEESIWCFLCEAQLYGVDEARKRFLEVGRDP 187

Query: 185 RPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAAC 244
           RPVMR+AY MF+DGGDP+K A  FS+ +  EYFYA LYAGLYHEA  E EAAK  I+AAC
Sbjct: 188 RPVMREAYNMFKDGGDPEKFATAFSNGQGNEYFYASLYAGLYHEAQKEPEAAKVQIIAAC 247

Query: 245 QSPYAQRSDDYMASLAKVHCICRNWS 266
           +SPY QRSDDYMASLAKVHC+CRNWS
Sbjct: 248 RSPYGQRSDDYMASLAKVHCLCRNWS 269
[Close]
BLAST of Spo20527.1 vs. UniProtKB/TrEMBL
Match: A0A0S3SQI8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G175300 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 6.400e-99
Identity = 186/268 (69.40%), Postives = 212/268 (79.10%), Query Frame = 1 

		  

Query: 1   MGISNTLYPTMTTLPTFSHTTSSSNPQSLPFPVTLTSK-PFINNHSQLSLSSISLSRRIF 60
           M IS+ L P++   P+  H++S        FP+ L+SK PF   H       ++L+RR+F
Sbjct: 5   MSISHNLKPSILVSPSLHHSSS--------FPILLSSKQPFSLTHP------LNLTRRLF 64

Query: 61  LPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDPRQKAYLW 120
           LPSVSGIWDALTG SN N REA LAIRRGM LFRQGD+ GS+ EFDKA++LDPRQKAYLW
Sbjct: 65  LPSVSGIWDALTGASN-NAREAVLAIRRGMSLFRQGDVSGSLVEFDKAIQLDPRQKAYLW 124

Query: 121 QRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRFLVVGRDP 180
           QRGLSLYYL+RFEEGAEQFR DVAQNPNDTEESIWCFLCEA LYGVDEARKRFL VG DP
Sbjct: 125 QRGLSLYYLNRFEEGAEQFRFDVAQNPNDTEESIWCFLCEAQLYGVDEARKRFLEVGIDP 184

Query: 181 RPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAKNYIVAAC 240
           RPVMR+AY MF+DGGDP+KL   FS  RD EYFYA LYAGLY+E+  E +AAK +IVAAC
Sbjct: 185 RPVMREAYNMFKDGGDPEKLVAAFSGGRDSEYFYASLYAGLYYESQNEIDAAKVHIVAAC 244

Query: 241 QSPYAQRSDDYMASLAKVHCICRNWSLN 268
           QS Y QRSDDYMA+L+KVHC CRNW  N
Sbjct: 245 QSSYGQRSDDYMAALSKVHCQCRNWVFN 257
[Close]
BLAST of Spo20527.1 vs. TAIR (Arabidopsis)
Match: AT3G05625.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 351.3 bits (900), Expect = 5.400e-97
Identity = 162/213 (76.06%), Postives = 187/213 (87.79%), Query Frame = 1 

		  

Query: 53  SLSRRIFLPSVSGIWDALTGGSNYNPREAALAIRRGMQLFRQGDIIGSVAEFDKAVELDP 112
           +LSRR+FLPSVS IWDA+TGG + NPREA  A+RRGMQLFRQGD+ GSVAEFD+A+ LDP
Sbjct: 41  ALSRRLFLPSVSSIWDAITGGGDSNPREAIAAVRRGMQLFRQGDVAGSVAEFDRAIILDP 100

Query: 113 RQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEALLYGVDEARKRF 172
           RQKAYLWQRGLSLYY+DRFEEGAEQFR+DVAQNPNDTEESIWCF+CEA L+GVD AR +F
Sbjct: 101 RQKAYLWQRGLSLYYVDRFEEGAEQFRIDVAQNPNDTEESIWCFICEARLHGVDVARTQF 160

Query: 173 LVVGRDPRPVMRQAYEMFRDGGDPQKLADTFSSSRDGEYFYAFLYAGLYHEALGEEEAAK 232
           L VGRD RPVMR+AY +F++GGDP+KL + FSS +  EYFYA LYAGLY+EA G+ E AK
Sbjct: 161 LEVGRDSRPVMREAYNLFKNGGDPEKLVNDFSSGQASEYFYASLYAGLYYEAEGKSENAK 220

Query: 233 NYIVAACQSPYAQRSDDYMASLAKVHCICRNWS 266
            ++ AAC SPY QRSDDYMASLAKVHC+CRNWS
Sbjct: 221 FHLTAACGSPYGQRSDDYMASLAKVHCLCRNWS 253
The following BLAST results are available for this feature:
BLAST of Spo20527.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902193012|gb|KNA12179.1|1.7e-153100.hypothetical protein SOVF_1278... [more]
gi|731326571|ref|XP_010674087.1|2.9e-12181.9PREDICTED: uncharacterized pro... [more]
gi|449454057|ref|XP_004144772.1|7.5e-10169.3PREDICTED: uncharacterized pro... [more]
gi|729458810|ref|XP_010524857.1|6.4e-10069.5PREDICTED: uncharacterized pro... [more]
gi|965608598|dbj|BAT95089.1|9.2e-9969.4hypothetical protein VIGAN_081... [more]
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BLAST of Spo20527.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QY30_SPIOL1.2e-153100.Uncharacterized protein OS=Spi... [more]
A0A0J8CKI9_BETVU2.1e-12181.9Uncharacterized protein OS=Bet... [more]
A0A0A0LGH0_CUCSA5.3e-10169.3Uncharacterized protein OS=Cuc... [more]
B9I7A8_POPTR6.4e-9968.0Uncharacterized protein OS=Pop... [more]
A0A0S3SQI8_PHAAN6.4e-9969.4Uncharacterized protein OS=Vig... [more]
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BLAST of Spo20527.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo20527.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G05625.15.4e-9776.0Tetratricopeptide repeat (TPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 76..238
score: 5.9
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 76..234
score: 1.67
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 81..148
score: 12
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 115..148
score: 5.9coord: 81..114
score: 8

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0005515 protein binding