Spo20589.1 (mRNA) | SpinachBase

Overview


Name	Spo20589.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	50S ribosomal protein L9, chloroplastic
Location	chr2 : 44176880 .. 44191062 (-)
Sequence length	1140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTTCTGAACGGCTTATTTCTTTAACCACACCAAAGATAAGGTCTCAACTCTCAAAAGATAGAGATAAAAGTTCAAGAAACAGGGAAGTAGACTAGTGGTACACTGGTAGTGGGAAGAAATCCGCAACGATGGCATCAACAACCTCCACTCTTTCACTCTCATGGAGCAATTCATTCCATAGCTTTGCAGGCGCCATTAGTGAACCTCAGAAATCCCCAGAAAATTGCAGAGTAATGCTCCCAATTGTCGCACAGAAGAAAGTCAAGAAAATTCGCAAGGTGATTGAATTTCTACTTCAACTTTTATTTTTCGACTTCCATTTCCGTTTATTTATTTATTTCACTGCTTTTGATTTCTAGGTAGTAATTATTGTGTGGATTTTGAAATGGGTGTTGGTAATTTTGATTAATTGTGGGCTATTTTGGTGTAGATAATTTTGAAGGAGGATATTCCAGATTTGGGGAAAAAGGGCCAGCTTTTGGATGTAAGAGCTGGGTTCTTAAGGAACTTCTTGCTGCCATTGGGAAAAGCCGAGGTTGTCACCCCATTGCTGCTCAAGTAAGTTGTCTATTTTGTTTTACAATTCAAATTATTTCTATGTTTAGTTTTTCCATTTTTGTGTTATAATTTATATATTCTAGAATTATGTCTAATACTGCTATAGTTTTGGTGTCGAATGAGCAGTAGTTTTGTGCATACAGGAAAAATGATGCTAAGCAGTACTTGTTTAAGGGTGGGTTCTGAAAAAGATGAGGAAAATTTGTCATTAATTTCACGTTCCTTCGCTGCTACAAGTGAGTAACTATCAGTAAATTCTATCAGTGGCAGTTTAGGGAGATGAACGATAAGCATGTGACTTTGGGTCTTCAGAAATCTGTATATTTCATGAATTCTATGAAGGTCTATGACTAAACTGTTGTGCATTCTTTCTAGATTCTTGTTTTAGTCTCTTGGTCTATTGAGTTCCATCACCCAAATTATTACTTTGTATATAAGTTCAAGTAGCCTATATTTTCTGGAATAGAAAATACTGCTTCAAGCCTTCAACCAAGGACACTAATTAGTCTAACAATTTGACAACTTGAAGAGACGAAGAAAATAGATTTTTTCACAATGGCGGACAAGACTAAGAGAGTAGTAATGATGGAGTGCAGTAAAGAAATCCTCTCATCTTTGTACTTCCTGGGCAGCTCTGCACTAAAGGATGCCTTCTGAATATGGGGTTGTATTGGAACTCAATCCTTATAGTACATGGAAATTTGACGTAGTGTATTGGAGAGGGGGTTGAATTAGGAATTACTGCTTTTGTCTTGCATGGATCATTGAATTGTGAAAGGATAGGGGAACTTTAAAATGTATCTCAGATGGATTCTATGATTCAGGGGAGAAAGGAAAGAGGGATATTGACCTCTTCATCACTGCCAGCTTGAGGATATATTTATGTGATATAGAGATCACAATGTGTTTACATAACATTAGTTTTAGCTGACAAGTGACCACAGTGCATGTTCTCATCGTTTATTTTTGTTGTCAAAGGGAGATGAAGATGGAAGATGAGAGAATTGAAGCTGAGAAGAAAAGGGTAAGTGTAGTATTTCTTGGCAACACGCATTATTGTTGGTTTTGAGTTATCATTTGTGTAATTCAATTTATGTTGTGGAATTTTTTGTATCTTAGTTTCTTTCCTTTAAGGTGTAGCTGGATACATTTGCTGAACTTAATTTTTACCAGCCATAGAAGTCAATGAGTAAAACAATGACAACTTCACTGTTCATGATACTTACAACTTGATTATCGGGACATATATTCTTCCGTCTTTATTGGCTGGCATCCCCTAGTTTTTGGTTTTTGTTCTGCTTGCTCGTTTGTTATTTTCAAGTATCCATCATTTTTTTGGGTGCAAAGTATCCATCATTGTGTTTGTGACTTTGTGTAATCAGTTTGGTGGACTTTAACGAACAAGGTAGAAGCTTTTGCATCGGTTTATTATGTAGTATTTCATGTAAAATTCTTGGATTACTTAGGCCATATTAACTGGAAATAGAAATCTATCTTCAAACCCCCACCCCAGCTGCTTGTCATTATGCCAGATGAGCTTAATCAGCTGCGCGAATTCTAGCTTTTAGCTGTATCGCATTAAAATTTAGCAAGACTTGGTTTTAAAATTGTCTCTTCATGATTATCCAATAATCTTGTCTAATATTTTTTTTGTTAGGTAAAAGAAGAGGCACAACAGCTAGCCCGGATGTTTGAAACAGTTGGAGCTTTCAAGGTTAAACGCAAAGGAGGAAAGGGAAAACAGATATTTGGAAGGTAAGAAGAACAGATTTTACATTCTTGCCTTGCTGTAGTCTGTTCCTCATAACCTGGTCTCATATTATTTTTCCTGTGGATTTGGCAGTGTGACTGCTCAAGATCTTGTTGACATAATCAAGGCACAGCTTCAAAGGTAATGTTACTGGCATCATTACTGATGACCTCATCATTAATGTTTTCTTTGACAATGAACTAGTTGATGAATGAAACCTGTATTTTGTGAAGATAAAAGTGATTCTGATGTACCGTAATTGTCTTAGAAGACCATACAGGTGAAGTGTTTTCAGCCATTTACAAAAATAAGTGAACATCAGCTCCTTGTTAGCATCCTCTTTAACTACGTTGGATGGGAGCCTGCCCTATTTTAGTTGGAATGTAAAATATGTAAACTTAGATAAAGCTAATCCCTATGTCGTGTGAATTGGCACTTTGATGCAAACTTGACACCTTGTACTGGAGAAGTTTTGAAGCCCTCCAATCAACAAGGTGTTGTTAAGAATTGATCTCCAAGCTCAACCTCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNGCTTGTAGTCATTATTTTGCGTGTGTGTTTTGAGTGGATGAACATCTTATGTAAAAGTTATGATCTTTGAAAGCCAATGCCAGTTATCTTAGAGGCACTAACATGATCGAAGGTTAGTAAGTTTTGGTGCCAGTGTGTGACGTCTAGCTTATTTTTATTGTGGAAAGTACATAGATGATTCGTCAATGGAAGCCTAAAGCCGTGATGCAGGTTATTCTAGGGCAGGGGAAACAGAGGTGCCAACTAAGTGCAGTTCTGCCCTCCTTTTTTTTTTATTCCATAGAAACTATATGTGGGGCTTAAATGGAAGCTCGACTCTTGGACCTTAATGACAAACTGTTTGATTACAATGTCAATAGATGCAGTAATGAGTTTATACCTCCTCAACCCCTACCCTCATTTAAATTATTATTTTTTGTCTCAGAGCCAAATTCACATATCACATTGCTTTAGAGCACGGATATTAAGGAGGGAAAGAGAGTAAACAGACTAATATGGTGGGTGTGGGTTCTAACTTTTGAGATTAAGTAGTGAAAAAAAAACTTACCTAGAGTAGTATGTTAACTTAGCTCTAGATCATCCCAAAATGGTGTATGTTATTATAATCATCAAAATAGTTCGAAGTATATGTTAACTTTTCTCTAGGATTGAGGGGGTGGAAATAAAAAGGAACAAATTGGAAAAGGAAGATGCATAGGAGGCTTATTTTTAGCACTCCTTATGCATGGTGCCCACATAAGTATTCCTAAATATAATCCTGAATCGGTTTGAGACATGTCAAAAACGTTCAGTCTTGAATTTTTTTTCCCTTCCTTGTTTTTGACAAATAGACTGTTAAGGGGAACTAAAATTCTAAGTTCAACTTTTCAACAGAGCATCCTTAGAACTAAATTTCATTGTTGTTCTGGTTCAGGGATGTGGACAAAAAAGTTGTTTTCCTCCCTGACATCAGGGAAACTGGGGAGTATATAGCAGAGTTGAAGCTACACCCTGATGTCACTGCTCAGGTTCGTGTAACGGTGTTTGCCAACTAATTGAAGCTTCCTGCAGAGTATTGTATCAGACAATCAAGCATTTTGATTCCATTCCAAGGTAAGCAAACCTTTCTTTAACTGAATTTATTATGAAAAAAGGTTATTACATTCAACTGTCTATGTGCTGTTAGCAAACTTAGTCCGACAGAAAAGCCTTTGTTTTTCTTTCTTCTATATACAAAAAACTTATACGAACACTCGAACTTCAAAGCTCGGGATTACTATGTCAAGTTAAAACCAATTTAATACGGAGTAGTCTTTTTAGATCTGTTTCCTCNCTCGAACTTCAAAGCTCGGGATTACTATGTCAAGTTAAAACCAATTTAATACGGAGTAGTCTTTTTAGATCTGTTTCCTCACGCCGCATTTCCTCTTTGTTTCCCTGAAAACATGTTTTCCTTGATGTATTTTTTAGGAGTCGTCTGATATTCAAATATTTCTTTTTTCATGGCTGGTCATTTGCAGGAGAGATACGGCCGTTGNTCGTCTGATATTCAAATATTTCTTTTTTCATGGCTGGTCATTTGCAGGAGAGATACGGCCGTTGTTTCAACTGTAGATGCCCATAATGCACCGAGAACTGTAACTTGTATGTGTCTAGATACTTTAGCTTAGTGAATTCTGTTGTTCTGTTACTCGTCTTTTTTTCCCATAATTGTTCATGTTTTCTACTTCCTTTTTGCTGCGAGTTTTTACACACTTGATTTTTCGAAGATAAATATCCTGCATGCGTGTATACTTTTAGCTACAAATGGCAACGAAGTTGCTGCAAGTAACCCATAGTTACAGGGGTTTCATTATGTTAAGTTGTACACTGCCTCATTTTACCACTAGGTAATCAAGATTAGTTAAAGCCTATGGTGAAAGCGTTTTTCAGAAAAGAATAATCCCAGATTTTAAAAAGCTCCAAAGAATTATTCTATCTGAGATAATGTTTTGCACATTTTCTTTTTATCTGAGATAACCTCTTAAAGTAGAGATTAGTTGTTTGATTGGGTACAACCACTAATTATCACCAGACTTTGGTGTTTGGTGGAGTTCTTAGGTAGATATTTAGTGTGTGTCGAAAGCTAATGGAAGTGTGTTTTGAGTGGTTTAAGGAATACTCTTAAATACTACTCCGTACTGTACTCCATCCACAAAGTAGTGGCGTTTCATGTGTTTATGTAATATACATACGAAGAAACAACAGCTAATTCAACCACTAGTTTTATCAAAATCATTCGTTACACGGATCGCTAAAAGGAAACCGCTACCATAGATGAACATAGAAAACACGAACTTAGCTATCCTATTCGACATGAAGAATTTTGCATTTTGCATTTTGCATTTTGCATTTTGCATTTTGCATGATAAAAATTCTAGTTTTTGTTATTTAAAGGGGAACTTGAAGTTTCATCTGCAACCTGTTTAGCTATTACCTTCCAACTTTTACAAGTGCAACACTTAACACTGAAATAAACCAAGCTAAAGTTATGATCAATTTACTACTTCCTCNACAAGTGCAACACTTAACACTGAAATAAACCAAGCTAAAGTTATGATCAATTTACTACTTCCTCGTTCTTTTTTAAATCACACAATTATTTAGGCATGTTTGCCAATNACAAGTGCAACACTTAACACTGAAATAAACCAAGCTAAAGTTATGATCAATTTACTACTTCCTCCGTTCTTTTTTAAATCACACAATTATTTAGGCATGTTTGCCAATGCACGATTTCAAACACTAATATCTCTAATTGTGGATCGGAAAAAATTATAAAAAGTTTATATTTAAATAATATTTATTGATACGAATCTAATAAGATCCCACACGACTATGTTTTTTCTTATGTATAAACCACTAAAGGAAGTCAAAGGNTAAATAATATTTATTGATACGAATCTAATAAGATCCCACACGACTATGTTTTTTCTTATGTATAAACCACTAAAGGAAGTCAAAGGTGTTTGTGTGAATAGTGTCTAAAACTCCATTGTGTCATATAAATAAGAACAGAGAAGTATTATACAACTATACAAGTAGTATTTTTGTTACAACATCATCAAGCCAAAGTCATTAGCAATGAGTCAATGACGTTTGTTTATGATAAGTAATAGGTGCAGATTGCTCTTGTGGTAATTGGTGTTAGCCGGTGGCGGTGTCAGTAAGGGTTTAGTGGGTTTAGCTGAATTCTTATTGGAACTGCAAAACTCTGATAGGTTTTGGCAGTAAACAAAGTTAAATTTAAAATAGAGCAAAATAGGAGCATATGAATGCCAAGCGTTGCAGTGGTTGAAGCTAGATACTTTTATGCCAAGGGTCAGCACTACTTTTGAATTTGGTTATGATAAGTTTTGTTTTGCTTTGGTTTTTTATTTAAGGGGTTATATTAAGGGGAATTAGTGCATTTCCTTCGTAATTCAGGTTTATCAATTTGTCTTTCCTTTCTATTAGGCTCAATTTTTCTCGGTTTTTTTGAAATAAATATTATTGTAATAATACACATGTGTATTCATGGAATTATTACTTGTAATTTAGATTTTGGACTATGATTTGAGTTAACTATATTTTTGTCCGAATTTCAAACCCTTAAGTAAAAACTTCTGGCACCACCACTGGTGTTAGCAAAGTGTTATTTGACCAACAGGGCGATCTTAGGTTCAAACCCTATTGTGCAAATATTTTATGTTTAAACTCACAAATCTAATATACATATATAAAAGAGGCATATTTGCTGAAATATTAGAGCGCCACCTAGGATTACTAATGGTTTCGGCTAATAAAAAATAAGATTTCTAATTTATTTTTGAATTAAAAAAATCGAGTGCCACGTAGATAATTAATTAGGTGCCACGTAGATATTTAAATTAATTAATTAATTACTAATATATACAATTCCATCCAAAATCAAACGCTCTAATAATTAAAAAATAAATCTAAAATAAAATCCATCCAAAATCAAACACTAATCTAAAATAAAATTCAATCCAAAATCAAACATTAATCCAATATTAGAGCGCCGCATAAGAAATCTAATGGTTTCAGCCAATGAAAAATAAGACTTCAAAATTATTTTTGAATTAAAAATTCGAATGCCACGCAGATAAATAATTAGGTGCCACGTAAATATTTTTATTAAATAATTATTAATATTTCTTATATACAATTTCATCCAAAATCAAACACTATAATAATTAAAAAAATAAATCTAAAATGAACTTCAATCCAAAATAAAAAAAAATTAATTTAATCTAATATATAAAATATAGCAGTTGATATATGTAGGAGTTTTATTTTAACGTAACAATTGAATAGAAACCGTGCATCGCACGGGCTAAAGTCTAGTTCTATAGAAAAGTTAACCAGCAGCTAACCATATTCTATAGAAAACCGCGTTGTGTAACTGATGGACAATCCGTTTTATTCGTTGTAAACACATAGAAAAGTTAGTTGATGAATGACCTCTCTCTTTTTCACAACCACCTAAGTACCTAACCAAATCCCACCTCATAATATAACTACATTGTCGTTGGGATATTTCTGGAACATGTCTGCATCTTTAAGCAAGTACTCAGTATAATTGAAATTTTCGAACTAAATGATTTTTCATGTAGTATTTTCAATTCCTCATCTAATATCGCCGTGAATTGTGGATGTCAACTAACTTATCATGGTATAGTCGGTTAATTATAACGACAAATGTGTAAATGGTAAATCCGTTATTCAATATAAATTATCCGGATTCCCTCTAAAAATTCAAATTAAGGTAAGAGTTGCCAAGCCCGAAGACGCTTGCTGTTTTACGAATAAAAAGTAAAGAATAGATAGATGCTGCAACTGTGCTGTCCCTGGAGAAGATTGCTGCAGATGTCATGCCATCTTAATTGTATCAAGTTCATTGTACAACATGCACGTACAACGTCGTTGAAACTTCCTTATTCAATAACGTATTTTCACGTTCTAAAATCATAATTAACCCTATCAACTATATTATGGATGTTAAATAATCAGTTACCCTCATTTAACCTGCTTAGCAATTTGTTTGCTTTTTATTTTCTATGTTTTTGTCTAATTCACTTAAATTATTTATATAGTTAATTAATATAGCATACATAGGTCGGCATTATATTGGTGTCTCCATCTCCAAAATTATTAAAATCTTGTAATATTATTAATAACCCACTTTATTAATTAGTTAACAGTAACACTATTCTTTCAACATTAACTATTGAATATTAATACGAGGGAGTATTGACTTGAGGCTTNGTAACACTATTCTTTCAACATTAACTATTGAATATTAATACGAGGGAGTATTGACTTGAGGCTTGCTTACTAGTTCATTCAACTAAAAATGTGACACTCATTNGTAACACTATTCTTTCAACATTAACTATTGAATATTAATACGAGGGAGTATTGACTTGAGGCTTACTTACTAGTTCATTCAACTAAAAATGTGACACTCATTCATAAATTGAACTGAATAAAATTGAGCCGAATTAAAATGAACTGAACTAAAATAAGAATCAGTCTTCCTAGCTAGCTAGTATATACAGAACACCAATTAATTAAGTGATAATGCTTGAATGGATAGTTCAAAGTTTAATGAATCTAACTAGGTAGCTTAGTTAGCTTTAGAGATTAATTAATGATTAAGTGAGAGANACCAATTAATTAAGTGATAATGCTTGAATGGATAGTTCAAAGTTTAATGAATCTAACTAGGTAGCTTAGTTAGCTTTAGAGATTAATTAATGATTAAGTGAGAGANGTTTAATGAATCTAACTAGGTAGCTTAGTTAGCTTTAGAGATTAATTAATGATTAAGTGAGAGAATTGAAAGTTTAATGAGTGGAAGTGGAAAGCCACTACATTGGTAATAAGTACGTACATAGATGATTAAGTGAGAGAATTGAAAATATCAAAGTATTGACTTAGTTAATATAATTATATTATAGAGTGGGTGTTAAGTTGTATGGTTATGAAGTGTTCCTCCAAATTAAAGATGATGACTTAGTATGTGCAAGCCAAGTAAAAGGAGCACATCTTTCGCTTGATTGGGAGCCCACTTTCTTACACTTGAATCTTATTTAAGCATCTTAATCAATTACCAATTCAATCATCACAACTATCATATATAAATCACTTCTTCACGACTTTTTTTTTTAATTTTAAATTTAAATTAATAATAGTAGTAACAAAAAGAGGCCTCTTTTTTGGTCCAACTACTTAACATTGTAGTAATAATATGATTATAATTGATTAATTGTCAATGGCCCGCCCAATTATATAGACATCTCACGCAACAACGTGCCCACATGCCCTCTTTAACTTGCCAGCATTCACTTATAAACGTGCACATAACAAACACTATTTCTCCTCAACAAGCCACTCACTCTTGTCACTCACTTCACTAATAAGATCATCAACTTCGTCTCCCTTTCATTGATCTATTAAGGAGTACCACTTCTTAGGCACACGCGCTCGGGTGCATCTCTTAGGGGTACTCATAATGAAATACGAGATGTCTTGAACAAAAGAGTAACTCGATTCACCTTATTTTATAATGCGTAACTCTAATTTTTAGAGATGTACACTCGAGTGTATGATGGACATGTATACATCATGCTGAAGTGTTTTCGATTGATGTAAATCAACTTCTTCCCTTTGCCTAGCTAATTAATGAGAAGCATGTGCAAAATTGTGGTGAGAGAAAGAAGTAGTAGTCCATAGTAGAATATAATTTGTGGGTTAATGATAGATAAGAGTATTTAACTAAAAAAATTGATGATTGATGATTCCAAATTCCAAATTCCAAATAATTGGTTAAGTGGCAATAATTAGTGAGGTGATGAATTGAAGCCAAGTTGGATTGCGGGTATAAATTCTTAAAATCCCCTCAAATGACAACTAATATTTGTGGTGGGGAACATGGGGATGCCCTTTTCTTGTACTATATACTACATGTCCTTAATTAGATGATGTCATTGCTTTCTCTTATTTTATACAGGATAAGGGCTTTGAGGCAGTTGCAACTTTGTTTTATAAGCAAACAAATTTTAAAGTTTACAATCATTTTTTTGGAATTCATTTTGGATAAGAGATTAAAGCTTATCTTTATAAATCAATTTTTTTAAACGAGTAATGTTACTATTCATCACTTAGAATGAGTTAAGTCATCCTTTTTCTAGGACTGTTTTTTATTTGCTCTGGTGTTAATATGAGGTTAATGTATGCTGATGTGGAAAAACAATACTCGCCTAGGGAAAGATTATTGTTTGGTTCACCTTGTAACAAAATTAAGAAGGAAGACAATCTCAAGGAAATTACAAAAAATGGTTTAACAAAAAAAAATGTAAAACCATGACAAATTTAGGTTTATTACTTTATTGGCGGATATGTTTGATGATGTATAAGTCGATTATAATAAGGAGATTAGTGGTTTACTACTATGAAAACAATCAAAGAGTACTACTTTGTACTCGATCCATAGTATACTACTTGTCATTGCAAGTGAGACAAGCCGAGCCAAGTACTACCATGTTCATTTAATTTAGGTGATCCCGAGCTTTGAATCGAGCTCAAAAATCTGTTCAAGCTCGGTTTATTTAAGAAATTTTGTGTTCGTGAATGGTTCATGAACGTGTCGTTTATTAATCGAGCCGAGTTGATAAACGAGCATTTTTCTTAAACGAGCTTTGCGGCTTTAAAGTTTAACCAATTGAAAACATAATAATTTTTTGACAAAAGCTTACATTACTAAAAATTTTTGAGCTATACTAGCTCTTACAAACTTAAAACATAAAACATTACAAACTACAAATATAAACAAAATTGTGGGTGTTGGCTCTCGTGTAGGAGTTATACAATTTACGAATTGGTAACTCAAAGAATGTTAAGGATTATACAAAGGAGAAACAGATCGATATGGATTAACCCAGGATAACAAAAATTTATTTTGAAACAGATGTAGAATTTTTCCAAGACTCTGAAGTTCAACTACTATTTGTCATCTTACGTACTCTAGGGTCTAGAGTTGTCTAATTGAGTAAGGGGGTGAGACCGTGAGAGGGTCGAGTTCGGATTGGATCTAGTCGAATTGGGTTATTTAGAATTTTGGACATTAATTGTTATCTCCATTTTATAATAATCTTTACAATTATTATTTGTATAGATATTAAGACAAAAGAGAAAGAGTGTATATGAATATGTGATTGGATATAATAAAATATGGAACGATTAAAAAAGATAAATGTGTAAAAATGTGACTATGTATAAGAAAAAAAAAAAAAAAGTAAGAGAAAGTGGGTGGAAAATTGTATTGTGGTGTAAGGCTCCGTTTGGTAGGACGTAAAACGTTTTCATGGAAAAACGATTTTCCCCTTTTCAATCATTTTACGTTGTTTGGTTAGATAAGGGATGTAAAATAATTTTACATGACTCCCTCAAATGTGGAAAACCCTTTTCCATTTGAAAGGGAGAGAAACCACTTTTCCTTCTTTCTTCCCTACCCCCCCTCTCCTTTCTTCCCCTCAATCTTCACCATTTTCTCCCATTTTCCTTTAAGTTACCAAACAAAGGAAAACTAGTTTGGAATTGTGTTTTCCCTTGAAAATTGTTTTCCATAAAAAATCATTTTACGTTGAAAACGTTTTACGCCCTACCAAACGGAGCCTAAGTTACCAAACAAAGGAAAACTAGTTTGGAATTGTGTTTTCCCTTGAAAAATGTTTTCCATGGAAAATCATTTTACAATGAAAACGTTTTACGCCCTACCAAACGGAGCCTAAAAGAGGTAAGATAATAATTTTCATGTTAAAAAGTAGAATAAACTACAGTATAAAAAGCATTATAAAATGGAGCTAGTCTATGAAAAAGGTAAAGATCATTTTGAAACGGAGATAGTATATGAATAAATATGCAAATCGAATTCTAGTCCGAATCGCTTTGGGGTTTTGGCGGGTCATTCTCGAGCCCGATTAGCTTTTTACCGATTTGCCTACCTTACTCTATGCTTAAAATTTCGTACAAAATACATATTCTTATACGTATGGAACTATCTCACACTTTAATTCGTGTTAGATGGATAAGTATAAAGTTAAATGAGATTGAGCATTTAGCTTGCTAATTAGGGGCCGAATAGTAACTTTATTCAATTTTCAAGACTTTCTTTTAAAATTTATATAAATGAGGCATATATTTTTCAACTTCCTCCACATCATGGAGTACAACAATTACTTGATTGTACAAAACTCTTAAGACATAATTAAATTATCCCTTATTGTACATTGACTAGATTAGAAATAACCACTCTTTGATTAATTAGTCGTCTCCTATAACGATAAAGTACAAATCAAATACCATAGTGTAAACTATATGAATATATATGTTTTTGTTTCGGTGTACAAATAATTCTTGTAAAAAATCCCTGTACAGTTAGTAAAACAGATTATATGTCATGTCATTCATCTTATAGACAAGTAATATTTATGTATGATATTACCGCTAGATAAATGAGAAGTCAATCTGATAGGAGAATAGCTGTTTTGGGAGAGGGGGTTAAAAGGAGATAATTAAATATGAAATAATGTTGGGTGTTGACATAAAACTATAAGAGAAATAAAGGCATGAAATTAAGTGGAAACCATCAATCAATTAATTAAATAAATATCTTTAAAGTAACAATTAACTTATGAAGACGGTTACTCTTGGATCATAAAAAGTGGTGTTAGTAGTAGACTTGTAGTACTGACTACTGACTAGTGACTACTGACTAGTGAGTGTGTTGTGTACTTGTGTGTGTATTTTGGTGCGCCGTGCAAGCATGTGGGGGGAGGTCCCTTATACGGTTATACCAACTCAGGTTTTCTATCCATTTATTCTTTGTCATTTGATGCAAATACAACTTATGAGATTGAAAGAACCAGATACAGATCGAAAACCAGTGGATTTTGTTAGCTTTTATTGCAATCAAGAAATGAACAAAAGAATCTAGTCCACTTTGGAATGATACAATACAACAAGTTAAACTGAACTAAACTGANCTTATGAGATTGAAAGAACCAGATACAGATCGAAAACCAGTGGATTTTGTTAGCTTTTATTGCAATCAAGAAATGAACAAAAGAACCTAGTCCACTTTGGAATGATACAATACAACAAGTTAAACTGAACTAAACTGAACTGGATTGAAATAAATTGGAAATAACGAAATTAAATGATACTCCGTATGGAATACTCTGTATATTATAGATGACGTCTAATAAACGTTAGAAAAGATGAAATTGAATAAAAGAATCGATTTTGATACTAACTTAAGCCTTTGCGGATTAAATTTTAAGAAAAGAAAAAGAATATATACGCGAGTAGATGGATAATACAAGTTTAATTACTCGAGTAAATATAGGGTAAAGATATAGAGAAATACCCAAAATCGGACAAGTGTGGAATACTAAAAATAATAAGTGAAAAAGAGGGAATAGAAAGTAAACTGATCCAAAAAGGAAAGATAGATTAAGTAGATGCCTCTATCATCTCACTTTTCGTGAATGAAAGGCAACCACCAATACTAGCCACTTACTCAAAGGAAAGAATTCAAACTTGCTATCCAACCCCTAAATTTATTTATAATAAATTAATTATTTAACTACGCGTCATCAGTTATTAACTGAATACTAAGCTAAGCTAAGCAAACTTAAAATAAATAAATAAAGTATAAATTTGTTCAATTTGTATTTATAAAATTAATATATATCAAATGATCAATAATTCACAGTAAAAGTCAATAACAATAAAGTATATAATCAATATCAATTGGGTATTAATTTCTTTTTTTTTTCTTTTTTTTTTAGTAATGGCAATCCACTAAAGGAGTAGGCGTAGGAAGAACATGAACAAACTTGGTTTCCATGTGATCATCCACCATTATTTGTTGTTCATCCTGATCATCTGGAGCTGGAAGATTAAGATCCAAGGAAAGAATATTCCTTGGCCCACCACTATCAATCACCGCCGCAGTACTCATCGGACGGCTAGGCAGAGTCGCCGCCACCGCCGCCGTCGTTGGTGCTCCTGCTCTATGCCTCCTCATATGACCTCCCAAGGCTTGACCTGAAGGAAACTCTGACCCACATATTGAACACTCGTGTACCC

mRNA sequence

CCCCTTCTGAACGGCTTATTTCTTTAACCACACCAAAGATAAGGTCTCAACTCTCAAAAGATAGAGATAAAAGTTCAAGAAACAGGGAAGTAGACTAGTGGTACACTGGTAGTGGGAAGAAATCCGCAACGATGGCATCAACAACCTCCACTCTTTCACTCTCATGGAGCAATTCATTCCATAGCTTTGCAGGCGCCATTAGTGAACCTCAGAAATCCCCAGAAAATTGCAGAGTAATGCTCCCAATTGTCGCACAGAAGAAAGTCAAGAAAATTCGCAAGATAATTTTGAAGGAGGATATTCCAGATTTGGGGAAAAAGGGCCAGCTTTTGGATGTAAGAGCTGGGTTCTTAAGGAACTTCTTGCTGCCATTGGGAAAAGCCGAGGTTGTCACCCCATTGCTGCTCAAGGAGATGAAGATGGAAGATGAGAGAATTGAAGCTGAGAAGAAAAGGGTAAAAGAAGAGGCACAACAGCTAGCCCGGATGTTTGAAACAGTTGGAGCTTTCAAGGTTAAACGCAAAGGAGGAAAGGGAAAACAGATATTTGGAAGTGTGACTGCTCAAGATCTTGTTGACATAATCAAGGCACAGCTTCAAAGGGATGTGGACAAAAAAGTTGTTTTCCTCCCTGACATCAGGGAAACTGGGGAGTATATAGCAGAGTTGAAGCTACACCCTGATGTCACTGCTCAGGTTCGTGTAACGGTGTTTGCCAACTAATTGAAGCTTCCTGCAGAGTATTGTATCAGACAATCAAGCATTTTGATTCCATTCCAAGGAGAGATACGGCCGTTGTTTCAACTGTAGATGCCCATAATGCACCGAGAACTGTAACTTTAATGGCAATCCACTAAAGGAGTAGGCGTAGGAAGAACATGAACAAACTTGGTTTCCATGTGATCATCCACCATTATTTGTTGTTCATCCTGATCATCTGGAGCTGGAAGATTAAGATCCAAGGAAAGAATATTCCTTGGCCCACCACTATCAATCACCGCCGCAGTACTCATCGGACGGCTAGGCAGAGTCGCCGCCACCGCCGCCGTCGTTGGTGCTCCTGCTCTATGCCTCCTCATATGACCTCCCAAGGCTTGACCTGAAGGAAACTCTGACCCACATATTGAACACTCGTGTACCC

Coding sequence (CDS)

ATGGCATCAACAACCTCCACTCTTTCACTCTCATGGAGCAATTCATTCCATAGCTTTGCAGGCGCCATTAGTGAACCTCAGAAATCCCCAGAAAATTGCAGAGTAATGCTCCCAATTGTCGCACAGAAGAAAGTCAAGAAAATTCGCAAGATAATTTTGAAGGAGGATATTCCAGATTTGGGGAAAAAGGGCCAGCTTTTGGATGTAAGAGCTGGGTTCTTAAGGAACTTCTTGCTGCCATTGGGAAAAGCCGAGGTTGTCACCCCATTGCTGCTCAAGGAGATGAAGATGGAAGATGAGAGAATTGAAGCTGAGAAGAAAAGGGTAAAAGAAGAGGCACAACAGCTAGCCCGGATGTTTGAAACAGTTGGAGCTTTCAAGGTTAAACGCAAAGGAGGAAAGGGAAAACAGATATTTGGAAGTGTGACTGCTCAAGATCTTGTTGACATAATCAAGGCACAGCTTCAAAGGGATGTGGACAAAAAAGTTGTTTTCCTCCCTGACATCAGGGAAACTGGGGAGTATATAGCAGAGTTGAAGCTACACCCTGATGTCACTGCTCAGGTTCGTGTAACGGTGTTTGCCAACTAA

Protein sequence

MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELKLHPDVTAQVRVTVFAN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20589	Spo20589	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20589.1	Spo20589.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20589.1.utr5p.1	Spo20589.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20589.1.CDS.6	Spo20589.1.CDS.6	CDS
Spo20589.1.CDS.5	Spo20589.1.CDS.5	CDS
Spo20589.1.CDS.4	Spo20589.1.CDS.4	CDS
Spo20589.1.CDS.3	Spo20589.1.CDS.3	CDS
Spo20589.1.CDS.2	Spo20589.1.CDS.2	CDS
Spo20589.1.CDS.1	Spo20589.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20589.1.utr3p.3	Spo20589.1.utr3p.3	three_prime_UTR
Spo20589.1.utr3p.2	Spo20589.1.utr3p.2	three_prime_UTR
Spo20589.1.utr3p.1	Spo20589.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20589.1.exon.8	Spo20589.1.exon.8	exon
Spo20589.1.exon.7	Spo20589.1.exon.7	exon
Spo20589.1.exon.6	Spo20589.1.exon.6	exon
Spo20589.1.exon.5	Spo20589.1.exon.5	exon
Spo20589.1.exon.4	Spo20589.1.exon.4	exon
Spo20589.1.exon.3	Spo20589.1.exon.3	exon
Spo20589.1.exon.2	Spo20589.1.exon.2	exon
Spo20589.1.exon.1	Spo20589.1.exon.1	exon

Homology

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BLAST of Spo20589.1 vs. NCBI nr
Match: gi|902230054|gb|KNA21690.1| (hypothetical protein SOVF_040960 [Spinacia oleracea])

HSP 1 Score: 369.4 bits (947), Expect = 3.900e-99
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60
           MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL
Sbjct: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60

Query: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120
           GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF
Sbjct: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120

Query: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180
           ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK
Sbjct: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180

Query: 181 LHPDVTAQVRVTVFAN 197
           LHPDVTAQVRVTVFAN
Sbjct: 181 LHPDVTAQVRVTVFAN 196

[Close]

BLAST of Spo20589.1 vs. NCBI nr
Match: gi|731355639|ref|XP_010689247.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 332.4 bits (851), Expect = 5.300e-88
Identity = 175/196 (89.29%), Postives = 184/196 (93.88%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60
           M+STTSTLSLSWS SF  FAGA +E  KSPEN RVMLPIVAQKK KKIRKIIL ED+PDL
Sbjct: 1   MSSTTSTLSLSWSTSFQGFAGATNELHKSPENARVMLPIVAQKKTKKIRKIILTEDMPDL 60

Query: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120
           GKKGQLLDVRAGF RNFLLPLGKA+++TP LLKEMKMEDERIEAEKKRVKEEA QLARMF
Sbjct: 61  GKKGQLLDVRAGFFRNFLLPLGKAQIITPTLLKEMKMEDERIEAEKKRVKEEALQLARMF 120

Query: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180
           ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKK+VFLP+IRETGEYIAELK
Sbjct: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKIVFLPEIRETGEYIAELK 180

Query: 181 LHPDVTAQVRVTVFAN 197
           LHP+VTAQVRVTVFAN
Sbjct: 181 LHPEVTAQVRVTVFAN 196

[Close]

BLAST of Spo20589.1 vs. NCBI nr
Match: gi|802551210|ref|XP_012064677.1| (PREDICTED: 50S ribosomal protein L9, chloroplastic [Jatropha curcas])

HSP 1 Score: 276.2 bits (705), Expect = 4.500e-71
Identity = 147/198 (74.24%), Postives = 174/198 (87.88%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNS--FHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIP 60
           MAS ++  +LSWS+S   HSF+G I+E  K P+  R+ + + AQKK KK RKIILKED+ 
Sbjct: 1   MASPSTAATLSWSSSSWLHSFSGPINEISKLPDK-RMPMVVFAQKKAKKTRKIILKEDVA 60

Query: 61  DLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLAR 120
           DLGKKGQL+DV+AG+ RNFLLP+GKA++VTP+LLKEMK+E+ERIEAEKKRVKEEAQQLA 
Sbjct: 61  DLGKKGQLIDVKAGYYRNFLLPMGKAQIVTPILLKEMKIEEERIEAEKKRVKEEAQQLAL 120

Query: 121 MFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAE 180
           MFETVGAFKVKRKGGKGK IFGSVTAQD+VDIIKAQLQRDVDK++V LP+IRETGEYIAE
Sbjct: 121 MFETVGAFKVKRKGGKGKLIFGSVTAQDIVDIIKAQLQRDVDKRIVSLPEIRETGEYIAE 180

Query: 181 LKLHPDVTAQVRVTVFAN 197
           LKLHP+VTA+VR+ V AN
Sbjct: 181 LKLHPEVTARVRLNVSAN 197

[Close]

BLAST of Spo20589.1 vs. NCBI nr
Match: gi|567159721|ref|XP_006419091.1| (hypothetical protein EUTSA_v10002672mg [Eutrema salsugineum])

HSP 1 Score: 275.0 bits (702), Expect = 1.000e-70
Identity = 150/199 (75.38%), Postives = 175/199 (87.94%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSF---HSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDI 60
           MAS+T+ LSLSWS+S    HSF GA +E  K  +  R  L +VAQKK KK+RK+ILKED+
Sbjct: 1   MASSTA-LSLSWSSSLSSPHSFNGAANETLKVSQR-RSTLEVVAQKKTKKLRKVILKEDV 60

Query: 61  PDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLA 120
            +LGK+GQLLDV+AGF RNFLLP GKA+++TP+LLKEMKMEDERIEAEK+RVKEEAQQLA
Sbjct: 61  SNLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPILLKEMKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 RMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIA 180
            +FETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRD+DK++V LP+IRETGEYIA
Sbjct: 121 MIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPDVTAQVRVTVFAN 197
           ELKLHPDV A+V++ VFAN
Sbjct: 181 ELKLHPDVIARVKLNVFAN 197

[Close]

BLAST of Spo20589.1 vs. NCBI nr
Match: gi|297815636|ref|XP_002875701.1| (hypothetical protein ARALYDRAFT_484888 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 274.6 bits (701), Expect = 1.300e-70
Identity = 150/199 (75.38%), Postives = 173/199 (86.93%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNS---FHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDI 60
           MAS+T+ LSLSWS+S    HSF    +E  K  E  R    +V+QKK KK+RK+ILKED+
Sbjct: 1   MASSTA-LSLSWSSSPCWSHSFNSGANETLKVSER-RFKFEVVSQKKAKKLRKVILKEDV 60

Query: 61  PDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLA 120
            DLGK+GQLLDV+AGF RNFLLP GKA+++TPLLLKE+KMEDERIEAEK+RVKEEAQQLA
Sbjct: 61  TDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 RMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIA 180
            +FETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRD+DK++V LP+IRETGEYIA
Sbjct: 121 LVFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPDVTAQVRVTVFAN 197
           ELKLHPDVTA+VR+ VFAN
Sbjct: 181 ELKLHPDVTARVRINVFAN 197

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BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ91_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040960 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.700e-99
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60
           MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL
Sbjct: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60

Query: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120
           GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF
Sbjct: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120

Query: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180
           ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK
Sbjct: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180

Query: 181 LHPDVTAQVRVTVFAN 197
           LHPDVTAQVRVTVFAN
Sbjct: 181 LHPDVTAQVRVTVFAN 196

[Close]

BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM33_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g206220 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.700e-88
Identity = 175/196 (89.29%), Postives = 184/196 (93.88%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60
           M+STTSTLSLSWS SF  FAGA +E  KSPEN RVMLPIVAQKK KKIRKIIL ED+PDL
Sbjct: 1   MSSTTSTLSLSWSTSFQGFAGATNELHKSPENARVMLPIVAQKKTKKIRKIILTEDMPDL 60

Query: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120
           GKKGQLLDVRAGF RNFLLPLGKA+++TP LLKEMKMEDERIEAEKKRVKEEA QLARMF
Sbjct: 61  GKKGQLLDVRAGFFRNFLLPLGKAQIITPTLLKEMKMEDERIEAEKKRVKEEALQLARMF 120

Query: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180
           ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKK+VFLP+IRETGEYIAELK
Sbjct: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKIVFLPEIRETGEYIAELK 180

Query: 181 LHPDVTAQVRVTVFAN 197
           LHP+VTAQVRVTVFAN
Sbjct: 181 LHPEVTAQVRVTVFAN 196

[Close]

BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
Match: A0A067L6A4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05424 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.100e-71
Identity = 147/198 (74.24%), Postives = 174/198 (87.88%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNS--FHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIP 60
           MAS ++  +LSWS+S   HSF+G I+E  K P+  R+ + + AQKK KK RKIILKED+ 
Sbjct: 1   MASPSTAATLSWSSSSWLHSFSGPINEISKLPDK-RMPMVVFAQKKAKKTRKIILKEDVA 60

Query: 61  DLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLAR 120
           DLGKKGQL+DV+AG+ RNFLLP+GKA++VTP+LLKEMK+E+ERIEAEKKRVKEEAQQLA 
Sbjct: 61  DLGKKGQLIDVKAGYYRNFLLPMGKAQIVTPILLKEMKIEEERIEAEKKRVKEEAQQLAL 120

Query: 121 MFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAE 180
           MFETVGAFKVKRKGGKGK IFGSVTAQD+VDIIKAQLQRDVDK++V LP+IRETGEYIAE
Sbjct: 121 MFETVGAFKVKRKGGKGKLIFGSVTAQDIVDIIKAQLQRDVDKRIVSLPEIRETGEYIAE 180

Query: 181 LKLHPDVTAQVRVTVFAN 197
           LKLHP+VTA+VR+ V AN
Sbjct: 181 LKLHPEVTARVRLNVSAN 197

[Close]

BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
Match: V4LCQ2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10002672mg PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.000e-71
Identity = 150/199 (75.38%), Postives = 175/199 (87.94%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSF---HSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDI 60
           MAS+T+ LSLSWS+S    HSF GA +E  K  +  R  L +VAQKK KK+RK+ILKED+
Sbjct: 1   MASSTA-LSLSWSSSLSSPHSFNGAANETLKVSQR-RSTLEVVAQKKTKKLRKVILKEDV 60

Query: 61  PDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLA 120
            +LGK+GQLLDV+AGF RNFLLP GKA+++TP+LLKEMKMEDERIEAEK+RVKEEAQQLA
Sbjct: 61  SNLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPILLKEMKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 RMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIA 180
            +FETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRD+DK++V LP+IRETGEYIA
Sbjct: 121 MIFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPDVTAQVRVTVFAN 197
           ELKLHPDV A+V++ VFAN
Sbjct: 181 ELKLHPDVIARVKLNVFAN 197

[Close]

BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
Match: D7LNI8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484888 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.100e-71
Identity = 150/199 (75.38%), Postives = 173/199 (86.93%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNS---FHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDI 60
           MAS+T+ LSLSWS+S    HSF    +E  K  E  R    +V+QKK KK+RK+ILKED+
Sbjct: 1   MASSTA-LSLSWSSSPCWSHSFNSGANETLKVSER-RFKFEVVSQKKAKKLRKVILKEDV 60

Query: 61  PDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLA 120
            DLGK+GQLLDV+AGF RNFLLP GKA+++TPLLLKE+KMEDERIEAEK+RVKEEAQQLA
Sbjct: 61  TDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 RMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIA 180
            +FETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRD+DK++V LP+IRETGEYIA
Sbjct: 121 LVFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPDVTAQVRVTVFAN 197
           ELKLHPDVTA+VR+ VFAN
Sbjct: 181 ELKLHPDVTARVRINVFAN 197

[Close]

BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
Match: RK9_ARATH (50S ribosomal protein L9, chloroplastic OS=Arabidopsis thaliana GN=RPL9 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.600e-71
Identity = 146/199 (73.37%), Postives = 173/199 (86.93%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNS---FHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDI 60
           MAS+T+ LSLSWS+S    HSF G  +E  K  E  R    +V+QKK KK+RK+ILKED+
Sbjct: 1   MASSTA-LSLSWSSSPCWSHSFNGGANETLKVSER-RFNFEVVSQKKAKKLRKVILKEDV 60

Query: 61  PDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLA 120
            DLGK+GQLLDV+AGF RNFLLP GKA+++TPLLLKE+KMEDERIEAEK+RVKEEAQQLA
Sbjct: 61  TDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 RMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIA 180
            +F+TVGAFKVKRKGGKGK IFGSVTAQDLVDIIK+QLQ+D+DK++V LP+IRETGEYIA
Sbjct: 121 MVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPDVTAQVRVTVFAN 197
           ELKLHPDVTA+V++ VFAN
Sbjct: 181 ELKLHPDVTARVKINVFAN 197

[Close]

BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
Match: RK9_PEA (50S ribosomal protein L9, chloroplastic OS=Pisum sativum GN=RPL9 PE=2 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 3.100e-64
Identity = 139/196 (70.92%), Postives = 160/196 (81.63%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60
           MAS+T + SLS +   HSFA  +    + P      + + AQKK KK RKIILKEDI ++
Sbjct: 1   MASSTLS-SLSSTPLQHSFAANLKTCSQFPNKSSGFM-VFAQKKTKKTRKIILKEDIVNV 60

Query: 61  GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARMF 120
           GKKG+LLDVR GF RNFL P GKA++VTP +LKEMK+E+ERIEAEK+RV EEAQQLA  F
Sbjct: 61  GKKGELLDVRVGFFRNFLFPSGKAQLVTPGVLKEMKIEEERIEAEKRRVLEEAQQLALFF 120

Query: 121 ETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAELK 180
           ET GAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQR+VDK++V LP+IRETGEYIAELK
Sbjct: 121 ETFGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVNLPEIRETGEYIAELK 180

Query: 181 LHPDVTAQVRVTVFAN 197
           LHPDVTA+VRV V AN
Sbjct: 181 LHPDVTAKVRVNVIAN 194

[Close]

BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
Match: RK9_IPOTF (50S ribosomal protein L9, chloroplastic OS=Ipomoea trifida GN=RPL9 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.100e-64
Identity = 135/197 (68.53%), Postives = 160/197 (81.22%), Query Frame = 1


		  
Query: 6   STLSLSWSNSFHSFAGAISEPQKSPENCRVMLP------IVAQKKVKKIRKIILKEDIPD 65
           S  +LSWS+S  S  G     + +P     ++       IV QKK KKIRKIILKED+ +
Sbjct: 5   SAAALSWSSS--SLLGNYKLSKNAPLGTAKLVERTSNFTIVCQKKTKKIRKIILKEDVQE 64

Query: 66  LGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARM 125
           LGKKGQL++VRAG+ RN+LLP+G A++VTP LLKEMK+E+ERIEAEKKRVKEEAQQLA +
Sbjct: 65  LGKKGQLMNVRAGYYRNYLLPMGMAQIVTPQLLKEMKIEEERIEAEKKRVKEEAQQLALI 124

Query: 126 FETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAEL 185
           FETVG FKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQR+VDK++V LP+IRETG Y AEL
Sbjct: 125 FETVGGFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVSLPEIRETGAYTAEL 184

Query: 186 KLHPDVTAQVRVTVFAN 197
           KLHP+VTA+V+V V AN
Sbjct: 185 KLHPEVTARVQVIVSAN 199

[Close]

BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
Match: RK9_WHEAT (50S ribosomal protein L9, chloroplastic OS=Triticum aestivum GN=RPL9 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.400e-59
Identity = 127/195 (65.13%), Postives = 156/195 (80.00%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNSFHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDIPDL 60
           MAS +   +L W+      A A S P++        L IVAQ +VKK R++ILK+DI ++
Sbjct: 1   MASPSCASTLPWT------AAAFSYPRRLQTRRAPSLVIVAQGRVKKYRQVILKDDIDEI 60

Query: 61  -GKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLARM 120
            GKKG  + VRAGF RNFLLP GKA ++TP +LKEM++E ERIEAEKKRVKEEAQQLAR+
Sbjct: 61  SGKKGDTMKVRAGFYRNFLLPKGKATLLTPDVLKEMQLEQERIEAEKKRVKEEAQQLARV 120

Query: 121 FETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIAEL 180
           FET+GAFKV RKGGKGKQIFGSVTAQDLVDIIK+QL RDVDK++V +P+IRE GEY+AE+
Sbjct: 121 FETIGAFKVPRKGGKGKQIFGSVTAQDLVDIIKSQLNRDVDKRLVEVPEIREVGEYVAEI 180

Query: 181 KLHPDVTAQVRVTVF 195
           KLHPDVTA+VR+TV+
Sbjct: 181 KLHPDVTAKVRLTVY 189

[Close]

BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
Match: RL9_PROM9 (50S ribosomal protein L9 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplI2 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.700e-25
Identity = 62/146 (42.47%), Postives = 95/146 (65.07%), Query Frame = 1


		  
Query: 50  KIILKEDIPDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLK--EMKMEDERIEAEKK 109
           K+ L E I  LGK+G L++V  G+ RNFLLP GKA  VTP +LK  E K E E+I A+K 
Sbjct: 6   KVALTESIASLGKEGDLVEVAPGYARNFLLPYGKAMNVTPAVLKQIERKKEKEKIAADK- 65

Query: 110 RVKEEAQQLARMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLP 169
            +K+EA        T+G F +K++ G+   +FG+VT  D+ + I+A  ++++D++ + +P
Sbjct: 66  -LKQEALDFQTALSTIGRFTIKKQVGEDGVLFGTVTNGDVAEAIEAATKKEIDRRNITVP 125

Query: 170 DIRETGEYIAELKLHPDVTAQVRVTV 194
           DI   G + A++KLHPDV A+V + V
Sbjct: 126 DIHNLGSFTAKIKLHPDVNAEVNIEV 149

[Close]

BLAST of Spo20589.1 vs. TAIR (Arabidopsis)
Match: AT3G44890.1 (ribosomal protein L9)

HSP 1 Score: 269.6 bits (688), Expect = 1.500e-72
Identity = 146/199 (73.37%), Postives = 173/199 (86.93%), Query Frame = 1


		  
Query: 1   MASTTSTLSLSWSNS---FHSFAGAISEPQKSPENCRVMLPIVAQKKVKKIRKIILKEDI 60
           MAS+T+ LSLSWS+S    HSF G  +E  K  E  R    +V+QKK KK+RK+ILKED+
Sbjct: 1   MASSTA-LSLSWSSSPCWSHSFNGGANETLKVSER-RFNFEVVSQKKAKKLRKVILKEDV 60

Query: 61  PDLGKKGQLLDVRAGFLRNFLLPLGKAEVVTPLLLKEMKMEDERIEAEKKRVKEEAQQLA 120
            DLGK+GQLLDV+AGF RNFLLP GKA+++TPLLLKE+KMEDERIEAEK+RVKEEAQQLA
Sbjct: 61  TDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLLLKELKMEDERIEAEKQRVKEEAQQLA 120

Query: 121 RMFETVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQRDVDKKVVFLPDIRETGEYIA 180
            +F+TVGAFKVKRKGGKGK IFGSVTAQDLVDIIK+QLQ+D+DK++V LP+IRETGEYIA
Sbjct: 121 MVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDIIKSQLQKDIDKRLVSLPEIRETGEYIA 180

Query: 181 ELKLHPDVTAQVRVTVFAN 197
           ELKLHPDVTA+V++ VFAN
Sbjct: 181 ELKLHPDVTARVKINVFAN 197

The following BLAST results are available for this feature:

BLAST of Spo20589.1 vs. NCBI nr
BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
BLAST of Spo20589.1 vs. TAIR (Arabidopsis)

BLAST of Spo20589.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902230054\|gb\|KNA21690.1\|	3.9e-99	100.	hypothetical protein SOVF_0409...	[more]
gi\|731355639\|ref\|XP_010689247.1\|	5.3e-88	89.2	PREDICTED: 50S ribosomal prote...	[more]
gi\|802551210\|ref\|XP_012064677.1\|	4.5e-71	74.2	PREDICTED: 50S ribosomal prote...	[more]
gi\|567159721\|ref\|XP_006419091.1\|	1.0e-70	75.3	hypothetical protein EUTSA_v10...	[more]
gi\|297815636\|ref\|XP_002875701.1\|	1.3e-70	75.3	hypothetical protein ARALYDRAF...	[more]

BLAST of Spo20589.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RQ91_SPIOL	2.7e-99	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BM33_BETVU	3.7e-88	89.2	Uncharacterized protein OS=Bet...	[more]
A0A067L6A4_JATCU	3.1e-71	74.2	Uncharacterized protein OS=Jat...	[more]
V4LCQ2_EUTSA	7.0e-71	75.3	Uncharacterized protein OS=Eut...	[more]
D7LNI8_ARALL	9.1e-71	75.3	Putative uncharacterized prote...	[more]

BLAST of Spo20589.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RK9_ARATH	2.6e-71	73.3	50S ribosomal protein L9, chlo...	[more]
RK9_PEA	3.1e-64	70.9	50S ribosomal protein L9, chlo...	[more]
RK9_IPOTF	9.1e-64	68.5	50S ribosomal protein L9, chlo...	[more]
RK9_WHEAT	1.4e-59	65.1	50S ribosomal protein L9, chlo...	[more]
RL9_PROM9	3.7e-25	42.4	50S ribosomal protein L9 OS=Pr...	[more]

BLAST of Spo20589.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G44890.1	1.5e-72	73.3	ribosomal protein L9	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000244	Ribosomal protein L9	PANTHER	PTHR21368	50S RIBOSOMAL PROTEIN L9	coord: 39..196 score: 7.2
IPR009027	Ribosomal protein L9/RNase H1, N-terminal	unknown	SSF55658	L9 N-domain-like	coord: 50..105 score: 1.62
IPR020069	Ribosomal protein L9, C-terminal	GENE3D	3.10.430.100		coord: 109..196 score: 1.8
IPR020069	Ribosomal protein L9, C-terminal	PFAM	PF03948	Ribosomal_L9_C	coord: 111..193 score: 5.0
IPR020069	Ribosomal protein L9, C-terminal	unknown	SSF55653	Ribosomal protein L9 C-domain	coord: 108..195 score: 2.09
IPR020070	Ribosomal protein L9, N-terminal	GENE3D	3.40.5.10		coord: 50..98 score: 1.1
IPR020070	Ribosomal protein L9, N-terminal	PFAM	PF01281	Ribosomal_L9_N	coord: 50..94 score: 2.8
IPR020070	Ribosomal protein L9, N-terminal	PROSITE	PS00651	RIBOSOMAL_L9	coord: 61..88 scor
IPR020594	Ribosomal protein L9, bacteria/chloroplast	HAMAP	MF_00503	Ribosomal_L9	coord: 49..196 score: 2
IPR020594	Ribosomal protein L9, bacteria/chloroplast	TIGRFAMs	TIGR00158	TIGR00158	coord: 50..195 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 92..122 scor
None	No IPR available	PANTHER	PTHR21368:SF18	39S RIBOSOMAL PROTEIN L9, MITOCHONDRIAL	coord: 39..196 score: 7.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0000311	plastid large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding