Spo20756.1 (mRNA) | SpinachBase

Overview


Name	Spo20756.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RNA polymerase sigma factor
Location	SpoScf_02685 : 141 .. 6694 (+)
Sequence length	1950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCGTGTGTTCTTTCCTTAACGATTCTATCACGCGGTGTTATACAAAAGTTATTGTTATTTATTTTTAGTGTAGAGATAGTCATAAGAACAATAATATAAACGAGATTCAATCCCAGATTATGGTATAACTCCCAACCCTTTAAATCAATTAAACTACTCATATACATTATTATCCTTTAATAGGGAGGCTAAGTTCATAGAATATACCTTGTGAGAAAGCATTGATTAACTCATTTTATCCTTCCACAAAACTTTGACACCCCCATAAAATAAACTCAAAGGAAACGTGAACAACCTCAACCACATAAAATAAAGAAAAACACACATAAATAAATAAATCTCAAATCTTCTTCTGCTCAACAAACCGTTAACCAACCAAAACTCACTCACTCTCTTTCTATCTATCTATCCCTCTTTATCTCTCTAAATTCTGAACGAATTTTCAGTCTAGTTTTATTAAGCTGAATTCATCACACCCTTAATTAATTATCAGGTACAAGTTTATATGATCATATAGTGTATACTATATGATCATTTGTCTCATCTCCTTTAAATTTGTTATTCTTGTGCGTGAATGTTTTGTTGTTTCTGTTATATTATTTGTTATTTGTTCAATTGCAATCTGTTTTTATGATTTATTGTTCGATTGTAATCCGTCCATTAAAAAAAACTGCAGCATTAATTTCATACTGGTTATTTGTTAGAAAATATGGGTTGTTTTTTGTAATGTGATCTTTGTTTCTATTTGTTTAGTGTTTTTTTTGTACTGTTTTTAATTGTAGTTCTTTGAATCTGGGTAAATTCGAATGAAGTTGTTTCTTCTTTGTTTAATCCGCCAATGTCAAAATTTCACACCATAATCCACTTGAAAAGCTGAAAGCAGAGAATTTTCAACTAGAAAAACAAATTCCAACCTCGAAGTACCCGGAATCTAGATTAGGGACATGGTTCAATTGGAAAAATCTATCATAAAATTCATTGAGGATAGCGTAGTTTTCCTAGTTGATAGATACTGACATACTGTTATGTAATCTTAGCCGATACAAATTGTTATGAAAATTATTGGAGGATAACATAGTTTTCCTAGTTGATAGATATTGTTATGTAATCTTAGCGGTAGAAATTGTTATGAAAATATTGTGGATAACGTACATTTCCTAGTTGATAGATATTGTTATGTAATCTAGATATAAATTGTTACGATAATTATTGAGGATAAAGTAGTTTTCTCTGGAGGAATGGAGGGGAAAAGAATGTGCATCATTATCTTACTGCTAAGTTGTTTTAGAAAGAGAAAAGTAACCGTGGGGTTCCTAGAAATCCGAAATTCTTTGAAGCTCCGTTTGATAGGGCGTATGTTTTCATAGAAAATGATTTTCCCCTTTTTAATAATTTTACATTGTTTGGTTTGACCAAGGTATGGAAAATAAATTTCCATAAGTCATTTAAAGGTGGAAAAACCTTTTCCATTTGAAAGAGAGGAAAACCACTTTTCCACCTTCCTCCTTACCTCCCTCTCCCTTATTCCCCTGAATCTTAACCATTTTCTCCCATTTTCTTTAAGAAACCAAGCAAAGAAAAACTAGTGAATCATGTTTTTCCTTGGAATATGTTTTCCATGGAAAATCATTTTGCACTGAAAACGTTTACACCCTACCAAGCGGAGCCTGAATGTTGAGCATTTCTCAATGCTAGTCCATAATTTAGCCAACAAATGTTTTGCTTGACTACGAATACAAACTAGCTCGTTTCGTTAAATTGGCAGTGACTTAGTGCGTGAGACTTTTTATGTACTTTGGTGGTGGTTGTCGATTGCTGTTGTTGCTGTGTGTTGTACTTTTTTTTGTGGTGCACTCTCCAATGTTTCCATCCCCTCCCGACATTAGACAAAAGAAATTGGAAAAATGAAATATATAATAATGAGAAGGCTAACAAAAGATACCTGGGGCAGATTGTAGAAGAAAATTTCTTGGGACAAAGTGATTGGCTTGAGCTTTGGAGTAGTGGAGTACCATGTTCTGATGGTGTTGCATGGTTCAGTCTTATGATGGCCACAGCTGCTGTCGTTGGGCTTAATGCTGGCAAAAGGCTTTTGAGCTCCTCTTTCTATTATTCTGATTTCACCGAAAAGCTCTCTTATTCCGGCGAACAATATCAGATTGCTCCCACTAAAAACGTAATTGTCGCCAAAAAAACAACTAATTTTAATCACAGAGGATCATCAATCAAGGCACTTAGGGAGTGTATAGATGGTACTACAATTCCTCCTATTGCTGAGCCATGGATTCCGAGATCTTCTCCTTTAGAAGAGGAAACTTTGGATCCTGAAACTCCATTGGAAGCTCTCCTTTTGCTTCAGAAGTCGATGCTTGAAAATCAGTTAGAGTTATCCTTTGAACGCCCTGGCATTAATGATATGTTTAGGGAGAACACTTGTAAGGAATCACATGTCACATCGTCAGGAACTCCAGCTCGAGTACGAAGGATAAATGCTAAGAAGAGAAGTCAGGTTGAAAGCAAACGAGAGATACCTCCAGTTGTTACTGTAAGTCCTGAGCTTCTTCAGAATCGTTCGATAGGGTATGTGAGAGGTATGACAAGTGATGTATTGCTGACTCATGCCCAAGTTGTCAATTTATCTCGAAAGATCGAAGCTGGTCTATCCTTGGAGGAGCATAAATCAAGGTACCTAATATTCTTCTCACTAGCTCTATGATTTCCAGTTTGAGACTGTTTTTGATTGAAATATTACCGGAATGATCTTCATGTCTCAGTGTTGGATAAATTTATACGTAGTATATCGATGAGTTTAACCATAAAATATTGTATTTCTTTTGGTATATTTAGAAAGAAGTTAGGTAGCATTGTTATTGCAAGTTGCTATTATAGTTTGTTCAACTGTTAATTGTCATCAAATTCCACCTTCTCTTTCTTGCTTTTTTCTTTTTACTTCCTGCTCCTTTCTGGTTTGATTGGTGACAATGACGATCTCCTATGACGATTCATGTTAGCTGACCCCAAATCATTTTGGGACTAAGGCTTTGTTGTTGTTGTTGTTGCCTTCAGACTGAAAGAAAAACTAGGGTGTGAACCTTCTGACGAGCAACTTGCGAATTCCTTAAAGATGAACCGCGCTGAAGTAAGATCCAAAATAATTGAGTGTTCGCTGGCCAGAGAAAAGTTGGCTATGAGCAATGTACGCTTGGTCATGTCAATTGCTCAAAGGTATGAGAACATGGGTGCTGACATGGCTGACCTTGTTCAGGTGAATTTCTTTCATGAACTTAATTCTGCCTTTTTCTTATCCAATAATGCTTCATATAGCACATCATCAACATTGTCATGTGAAACTCATCAAATATTTAATCTAGGGCGGACTGATTGGACTACTTCGTGGAATTGAGAAGTTTGATTCCTCCAAAGGGTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAAGTAAGTGGATTGCTCGTGTTACTTGTTATTATATAGAACTTATCCCCTTAAAATACTGCTTTTCTGTTGGATCTTGATAATTCCCTATTCGTCCTGGTGACTACTTGTAGTTATTCATTAGTTTAATCTCGAGAATAGAAAACGGTCAATTTTTTTTTTTAAAATTATTTATGAAAGTAATAGGAATTAATAATGGGTCTATTGTAGATTGTATGCCTGTTTAGTTCCAATTGAGAGATACAGCTAATCAAAGAAGCTATATCGATCTTTCATTTCTACGAGTATTTGCTGGCAATGTTAGCTTTCTCTCTTGGTTTCAATCTCAGCTTTGACTTCTTCTGCAGGGTGTTTCTAGAGCACTAGTTGAAAATTCAAGAACTTTGAGGTTACCTACTCATCTTTATGAAAGATTAAGTTTAATTCGCAGCGCGAAAACTAAACTTGAAGAGAAAGGGATAACTCCTACGGTTGATGTAAGTTGTATATCTAACTTTAACGAGCAACCAATTCATCATACTCATTACCATATGTCTATACTGAGGACTAGTTGTTACTCTTTGAACCTTAATTTTCTGTAACATATTGTGGTAAGTTGGTAACTTTCTTAACCTTTTGCAGAAAATAGCTGAATCTCTGAACATGTCTCATAAAAAAGTTAAGAATGCAACAGAGGTTAGTAAAACATTGATAGCACTCCGTAGTAAATAATTTTAGAAGGCGTGTTAAGTTGTGTTTGTCTTTTGTAATTTTTCTTACTGTTACTTATAATTGGTGCAGGCTGTCAGATCTGTCTTATCATTTGACAGGGAACCCTTCCCCTCTTTGAATGGTCTTCCAGGAGAGACATATCATAGTGTAAGTATTTTGAGGAAAGAGAACTCAGATAAGCGAGACGGTCATGTTCTTCGGTTACACCCTATTATATACGAAGTATTTATATTCACCTGATTTTACTGAACTGGGATTAAATTACTGAATAAATTGATGTTTACTGCTTAAAACTGATTGTCACTAATTCACTAGGATACGCAGTTATTAGTTAACTTATGAAAATTGACTGCTTTTTACTAAATACTAATTTCAAGTTGGAGAAGTTAGTTTTGACTTTCATGATTAATTTGAGCTCATTCTTAACACACTTTTTACTTGGCTGACAGTATATCGCGGACAATCGTCTTGAGAATAATCCGTGGCATTGTGTAGATGAATGGGCACTCAAGGTAATTGACATTAAATCAGACAGTGTCTGTCATGTTTGTGAAATACTTGTTTCAGTTGTTTGTCTCATCTTGACATTTGACTTAATTGGAATCAGCTCTAATTGATCAATTCGAGACTTCAGGATGCACATAATTTCTGTTCCTAATTCTAAATTCATTATCTACTTTAAAGAGAAAATATAGAAACAACAGATAATGAGTGTGTTGTTTAACTGTAGTTGAGAATTATGAGCAAATGTTGGAAACTTGATAACTTTCCTATCAGTCATAACTTCTTCCAGCTATATGTTTTTGAAACAGGAACTCTGAAAGACGTATAAATTTCTGTAGTTGAGATCATTTAAGTTATTTTTTCATTGAAAGAACATAAATATTACGAATGATGTACTATGTACGATTTTATTTTATTAAATTACCTATTTCTATATGGCAAGTTTTGATTGAAGTTTTCAGACTGTATGAAAATGATGTGTTTAAAGAGAAATGCATACTACACTTGCACGTCTTTGAAATATACTTATGTGATGTATAATTTTCATTTTTTTCACATTCATTAACATTAGCATCACTCTTCTTTGCAGCAAGATGTAAGCAATCTTATAGATACCACACTCAGGGAACGAGAGAAAGATATAATACGCCTTTATTATGGTCTGGATGATGAATCTCTGACTTGGGAAGAAATTAGCAAAAGGTGAGCCGGGATAATTATCGTTCTCATTAGCATGGCCCCCTCCCCCCTGATTTGGAGTCTTAGAGTCGGTGTCAGGAATAAAACAAGGGAAAGAATAGCATTTCAATGCAATATGAGAGTAAAACCAATATTTCCTACTTCTTTTTGAAGGAAGTGGTGGTTCTGTTAAGTCACCTGTTAAATCTGTGTCCGTGGATTTTTTTTCTTTTTCTGGTCCACCGAGAAAAATGAAAGCTGACTACTTAACTTAGCTGAGGAAATATATTTGTTTACACGATGTTTGGTCTTTTTTTTTTTTTTTTCTTTTTTCTGATACCAAGGAATTTTTGATATGATTGTGTCAATCAACATTACCGACCAGGCGACCACCTCTAAAGTCTAACTGATATACTAGATCATGTGTGTATTATACATTTTATACTCTCTCCCATCCCAGTTAAAAGTTAACGTACTCATACTCTATATCACCTGTTGTGTCATGGATATATGTTAACTACTTTTAGTAAGTTTTTTTTCCAATTTTTCTCTAAGTGTTCACTTCTTTTGTCCATGTTTTCTTTCTGTTTAATTGTTGCGTCTTTAATTCTCTTACGTTAAGTTTCAACTAGGACGGAGGGAGTATGACTAAAACTTTCAAGTCCAATCCCATTTTCAATGATGTCCTGTTTTCTGAACTCCATGCATATCTTGATTTCACTTACATGACATTATTTGTGGGTTCAGGATTGGTTTGTCAAGAGAAAGAGTCCGGCAGGTTGGGCTAGTGGCGTTAGAGAAACTAAAACATGCTGCGAGAAAGAGAAGGATGGAAGCCTTGCTGGTGAAACACTAGTATGACATACGGTTCGTAGTCTTTTGTAGAGCTTATCGGCCTGTGTATATATATATAACAGAACAGAACAGAACAGAACAGAAACGAACAGTACATTCACTTGCTTACAGTAAGTACAAGTTTTTATCAGGGGCGGCCTACCTTTAAACTTTATTTATTATTATATCCACTGTTTCTGAGATTAAGGAAGATCGTTGTATAGTTTTATGTAAGGATCACAACACAATTACTTGCGCATTATGTATTAATACAAGTTTGAATTTTGATCAGACATTTCTTTTTCTAATAAAAGGGCGCATATGATGTCTATGTACTTTTTTTTTCCACTTTCTGGTCCTG

mRNA sequence

ATGATGCCTGAATTCATCACACCCTTAATTAATTATCAGATTGTAGAAGAAAATTTCTTGGGACAAAGTGATTGGCTTGAGCTTTGGAGTAGTGGAGTACCATGTTCTGATGGTGTTGCATGGTTCAGTCTTATGATGGCCACAGCTGCTGTCGTTGGGCTTAATGCTGGCAAAAGGCTTTTGAGCTCCTCTTTCTATTATTCTGATTTCACCGAAAAGCTCTCTTATTCCGGCGAACAATATCAGATTGCTCCCACTAAAAACGTAATTGTCGCCAAAAAAACAACTAATTTTAATCACAGAGGATCATCAATCAAGGCACTTAGGGAGTGTATAGATGGTACTACAATTCCTCCTATTGCTGAGCCATGGATTCCGAGATCTTCTCCTTTAGAAGAGGAAACTTTGGATCCTGAAACTCCATTGGAAGCTCTCCTTTTGCTTCAGAAGTCGATGCTTGAAAATCAGTTAGAGTTATCCTTTGAACGCCCTGGCATTAATGATATGTTTAGGGAGAACACTTGTAAGGAATCACATGTCACATCGTCAGGAACTCCAGCTCGAGTACGAAGGATAAATGCTAAGAAGAGAAGTCAGGTTGAAAGCAAACGAGAGATACCTCCAGTTGTTACTGTAAGTCCTGAGCTTCTTCAGAATCGTTCGATAGGGTATGTGAGAGGTATGACAAGTGATGTATTGCTGACTCATGCCCAAGTTGTCAATTTATCTCGAAAGATCGAAGCTGGTCTATCCTTGGAGGAGCATAAATCAAGACTGAAAGAAAAACTAGGGTGTGAACCTTCTGACGAGCAACTTGCGAATTCCTTAAAGATGAACCGCGCTGAAGTAAGATCCAAAATAATTGAGTGTTCGCTGGCCAGAGAAAAGTTGGCTATGAGCAATGTACGCTTGGTCATGTCAATTGCTCAAAGGTATGAGAACATGGGTGCTGACATGGCTGACCTTGTTCAGGGCGGACTGATTGGACTACTTCGTGGAATTGAGAAGTTTGATTCCTCCAAAGGGTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAAGGTGTTTCTAGAGCACTAGTTGAAAATTCAAGAACTTTGAGGTTACCTACTCATCTTTATGAAAGATTAAGTTTAATTCGCAGCGCGAAAACTAAACTTGAAGAGAAAGGGATAACTCCTACGGTTGATAAAATAGCTGAATCTCTGAACATGTCTCATAAAAAAGTTAAGAATGCAACAGAGGCTGTCAGATCTGTCTTATCATTTGACAGGGAACCCTTCCCCTCTTTGAATGGTCTTCCAGGAGAGACATATCATAGTTATATCGCGGACAATCGTCTTGAGAATAATCCGTGGCATTGTGTAGATGAATGGGCACTCAAGCAAGATGTAAGCAATCTTATAGATACCACACTCAGGGAACGAGAGAAAGATATAATACGCCTTTATTATGGTCTGGATGATGAATCTCTGACTTGGGAAGAAATTAGCAAAAGGATTGGTTTGTCAAGAGAAAGAGTCCGGCAGGTTGGGCTAGTGGCGTTAGAGAAACTAAAACATGCTGCGAGAAAGAGAAGGATGGAAGCCTTGCTGGTGAAACACTAGTATGACATACGGTTCGTAGTCTTTTGTAGAGCTTATCGGCCTGTGTATATATATATAACAGAACAGAACAGAACAGAACAGAAACGAACAGTACATTCACTTGCTTACAGTAAGTACAAGTTTTTATCAGGGGCGGCCTACCTTTAAACTTTATTTATTATTATATCCACTGTTTCTGAGATTAAGGAAGATCGTTGTATAGTTTTATGTAAGGATCACAACACAATTACTTGCGCATTATGTATTAATACAAGTTTGAATTTTGATCAGACATTTCTTTTTCTAATAAAAGGGCGCATATGATGTCTATGTACTTTTTTTTTCCACTTTCTGGTCCTG

Coding sequence (CDS)

ATGATGCCTGAATTCATCACACCCTTAATTAATTATCAGATTGTAGAAGAAAATTTCTTGGGACAAAGTGATTGGCTTGAGCTTTGGAGTAGTGGAGTACCATGTTCTGATGGTGTTGCATGGTTCAGTCTTATGATGGCCACAGCTGCTGTCGTTGGGCTTAATGCTGGCAAAAGGCTTTTGAGCTCCTCTTTCTATTATTCTGATTTCACCGAAAAGCTCTCTTATTCCGGCGAACAATATCAGATTGCTCCCACTAAAAACGTAATTGTCGCCAAAAAAACAACTAATTTTAATCACAGAGGATCATCAATCAAGGCACTTAGGGAGTGTATAGATGGTACTACAATTCCTCCTATTGCTGAGCCATGGATTCCGAGATCTTCTCCTTTAGAAGAGGAAACTTTGGATCCTGAAACTCCATTGGAAGCTCTCCTTTTGCTTCAGAAGTCGATGCTTGAAAATCAGTTAGAGTTATCCTTTGAACGCCCTGGCATTAATGATATGTTTAGGGAGAACACTTGTAAGGAATCACATGTCACATCGTCAGGAACTCCAGCTCGAGTACGAAGGATAAATGCTAAGAAGAGAAGTCAGGTTGAAAGCAAACGAGAGATACCTCCAGTTGTTACTGTAAGTCCTGAGCTTCTTCAGAATCGTTCGATAGGGTATGTGAGAGGTATGACAAGTGATGTATTGCTGACTCATGCCCAAGTTGTCAATTTATCTCGAAAGATCGAAGCTGGTCTATCCTTGGAGGAGCATAAATCAAGACTGAAAGAAAAACTAGGGTGTGAACCTTCTGACGAGCAACTTGCGAATTCCTTAAAGATGAACCGCGCTGAAGTAAGATCCAAAATAATTGAGTGTTCGCTGGCCAGAGAAAAGTTGGCTATGAGCAATGTACGCTTGGTCATGTCAATTGCTCAAAGGTATGAGAACATGGGTGCTGACATGGCTGACCTTGTTCAGGGCGGACTGATTGGACTACTTCGTGGAATTGAGAAGTTTGATTCCTCCAAAGGGTTCAAAATTTCAACATATGTTTACTGGTGGATACGTCAAGGTGTTTCTAGAGCACTAGTTGAAAATTCAAGAACTTTGAGGTTACCTACTCATCTTTATGAAAGATTAAGTTTAATTCGCAGCGCGAAAACTAAACTTGAAGAGAAAGGGATAACTCCTACGGTTGATAAAATAGCTGAATCTCTGAACATGTCTCATAAAAAAGTTAAGAATGCAACAGAGGCTGTCAGATCTGTCTTATCATTTGACAGGGAACCCTTCCCCTCTTTGAATGGTCTTCCAGGAGAGACATATCATAGTTATATCGCGGACAATCGTCTTGAGAATAATCCGTGGCATTGTGTAGATGAATGGGCACTCAAGCAAGATGTAAGCAATCTTATAGATACCACACTCAGGGAACGAGAGAAAGATATAATACGCCTTTATTATGGTCTGGATGATGAATCTCTGACTTGGGAAGAAATTAGCAAAAGGATTGGTTTGTCAAGAGAAAGAGTCCGGCAGGTTGGGCTAGTGGCGTTAGAGAAACTAAAACATGCTGCGAGAAAGAGAAGGATGGAAGCCTTGCTGGTGAAACACTAG

Protein sequence

MMPEFITPLINYQIVEENFLGQSDWLELWSSGVPCSDGVAWFSLMMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAARKRRMEALLVKH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20756	Spo20756	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20756.1	Spo20756.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20756.1.exon.1	Spo20756.1.exon.1	exon
Spo20756.1.exon.2	Spo20756.1.exon.2	exon
Spo20756.1.exon.3	Spo20756.1.exon.3	exon
Spo20756.1.exon.4	Spo20756.1.exon.4	exon
Spo20756.1.exon.5	Spo20756.1.exon.5	exon
Spo20756.1.exon.6	Spo20756.1.exon.6	exon
Spo20756.1.exon.7	Spo20756.1.exon.7	exon
Spo20756.1.exon.8	Spo20756.1.exon.8	exon
Spo20756.1.exon.9	Spo20756.1.exon.9	exon
Spo20756.1.exon.10	Spo20756.1.exon.10	exon
Spo20756.1.exon.11	Spo20756.1.exon.11	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20756.1.CDS.1	Spo20756.1.CDS.1	CDS
Spo20756.1.CDS.2	Spo20756.1.CDS.2	CDS
Spo20756.1.CDS.3	Spo20756.1.CDS.3	CDS
Spo20756.1.CDS.4	Spo20756.1.CDS.4	CDS
Spo20756.1.CDS.5	Spo20756.1.CDS.5	CDS
Spo20756.1.CDS.6	Spo20756.1.CDS.6	CDS
Spo20756.1.CDS.7	Spo20756.1.CDS.7	CDS
Spo20756.1.CDS.8	Spo20756.1.CDS.8	CDS
Spo20756.1.CDS.9	Spo20756.1.CDS.9	CDS
Spo20756.1.CDS.10	Spo20756.1.CDS.10	CDS
Spo20756.1.CDS.11	Spo20756.1.CDS.11	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20756.1.utr3p.1	Spo20756.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo20756.1 vs. NCBI nr
Match: gi|902181912|gb|KNA09828.1| (hypothetical protein SOVF_149960 [Spinacia oleracea])

HSP 1 Score: 950.7 bits (2456), Expect = 1.100e-273
Identity = 491/492 (99.80%), Postives = 492/492 (100.00%), Query Frame = 1


		  
Query: 45  MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS 104
           MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS
Sbjct: 1   MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS 60

Query: 105 IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP 164
           IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP
Sbjct: 61  IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP 120

Query: 165 GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY 224
           GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY
Sbjct: 121 GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY 180

Query: 225 VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR 284
           VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR
Sbjct: 181 VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR 240

Query: 285 SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK 344
           SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK
Sbjct: 241 SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK 300

Query: 345 ISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEEKGITPTVDKIAESL 404
           ISTYVYWWIRQGVSRALVENSRTLRLPTHL+ERLSLIRSAKTKLEEKGITPTVDKIAESL
Sbjct: 301 ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKTKLEEKGITPTVDKIAESL 360

Query: 405 NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ 464
           NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ
Sbjct: 361 NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ 420

Query: 465 DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA 524
           DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA
Sbjct: 421 DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA 480

Query: 525 RKRRMEALLVKH 537
           RKRRMEALLVKH
Sbjct: 481 RKRRMEALLVKH 492

[Close]

BLAST of Spo20756.1 vs. NCBI nr
Match: gi|731320363|ref|XP_010670766.1| (PREDICTED: RNA polymerase sigma factor sigA [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 818.9 bits (2114), Expect = 5.100e-234
Identity = 429/501 (85.63%), Postives = 457/501 (91.22%), Query Frame = 1


		  
Query: 42  FSLMMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHR 101
           F L MATAAVVGL+AG+RLLSSSF YSD TEKLSY+GEQ+QI PTK VIVAK+T NFN R
Sbjct: 2   FRLTMATAAVVGLSAGQRLLSSSFCYSDLTEKLSYTGEQHQITPTKTVIVAKRTANFNQR 61

Query: 102 GSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSF 161
           GSS+KAL+ECIDGT IPP +E W P SSPLEEE   PETPLEALLLLQKSMLE QLELSF
Sbjct: 62  GSSVKALKECIDGTVIPPTSETWNPGSSPLEEENSSPETPLEALLLLQKSMLEKQLELSF 121

Query: 162 ERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQ------VESKREIPPVVTVSPE 221
           ER  + DM RE T K SHVT+SG PARVRRINAKKRSQ       ES+R  PP+ TVSPE
Sbjct: 122 ERNSMTDMPRECTSKGSHVTASGIPARVRRINAKKRSQGKKIFTKESERGKPPMATVSPE 181

Query: 222 LLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANS 281
           LLQNRSIGYVRG+TSD LLTHAQVVNLS+KI+AGLSLE+ KSRLKEKLGCEPSDEQLANS
Sbjct: 182 LLQNRSIGYVRGLTSDELLTHAQVVNLSQKIKAGLSLEDQKSRLKEKLGCEPSDEQLANS 241

Query: 282 LKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIE 341
           L+MNRAEVRSK+IECSLAREKLAMSNVRLVMSIAQRYENMGADM DLVQGGLIGLLRGIE
Sbjct: 242 LRMNRAEVRSKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMTDLVQGGLIGLLRGIE 301

Query: 342 KFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEEKGITP 401
           KFDSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLPTHL+ERLSLIRSAK KLEEKGITP
Sbjct: 302 KFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRSAKNKLEEKGITP 361

Query: 402 TVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWH 461
           ++D+IAESLNMSHKK+KNATEAVRSVLS DRE FPSLNGLPGET+HSYIADNRLENNPWH
Sbjct: 362 SIDRIAESLNMSHKKIKNATEAVRSVLSLDREVFPSLNGLPGETFHSYIADNRLENNPWH 421

Query: 462 CVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLV 521
            VDEWALK +VSNLIDT LREREK+IIRLYYGL+DESLTWEEISKRIGLSRERVRQVGLV
Sbjct: 422 GVDEWALKHEVSNLIDTALREREKEIIRLYYGLEDESLTWEEISKRIGLSRERVRQVGLV 481

Query: 522 ALEKLKHAARKRRMEALLVKH 537
           ALEKLKHAARKRRMEALLVKH
Sbjct: 482 ALEKLKHAARKRRMEALLVKH 502

[Close]

BLAST of Spo20756.1 vs. NCBI nr
Match: gi|590639776|ref|XP_007029766.1| (Sigma factor A isoform 1 [Theobroma cacao])

HSP 1 Score: 649.0 bits (1673), Expect = 7.000e-183
Identity = 350/508 (68.90%), Postives = 409/508 (80.51%), Query Frame = 1


		  
Query: 45  MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGE----QYQIAPTKNVIVAKKTTNF-- 104
           MMATAAV+GL  GKRLLSSSF YSD  EKLSY+ +     +Q + TK++IVAKK++N   
Sbjct: 1   MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 105 -----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSML 164
                N R  SIKAL+E +D  +I   AEP    S+ LE E+ D +  +EALLLLQKSML
Sbjct: 61  SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 165 ENQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVT-- 224
           E Q  LSFER    +       K+  VT SG  AR RR N K++  +++K  I P     
Sbjct: 121 EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQL 180

Query: 225 ---VSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPS 284
              +SPELLQ+R  GYV+G+ SD LL+HA+VV LS+KI+AGLSLEEH+ RLKE+LGCEPS
Sbjct: 181 RSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPS 240

Query: 285 DEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLI 344
           DEQLA SLK++RAE+RSK+IECSLAREKLAMSNVRLVMSIAQRY+NMGA+M+DL+QGGLI
Sbjct: 241 DEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLI 300

Query: 345 GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKL 404
           GLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHL+ERL LIR+AK +L
Sbjct: 301 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRL 360

Query: 405 EEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNR 464
           EEKGITPT+D+IAESLNMS KKV+NATEAV  V S DR+ FPSLNGLPGET+HSYIADN 
Sbjct: 361 EEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNH 420

Query: 465 LENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRER 524
           +EN PWH VDEWALK +V+ LI  TL ERE++IIRLYYGLD ESLTWE+ISKRIGLSRER
Sbjct: 421 VENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRER 480

Query: 525 VRQVGLVALEKLKHAARKRRMEALLVKH 537
           VRQVGLVALEKLKHAARK++MEA+LVKH
Sbjct: 481 VRQVGLVALEKLKHAARKKKMEAMLVKH 508

[Close]

BLAST of Spo20756.1 vs. NCBI nr
Match: gi|1000955819|ref|XP_002524027.2| (PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis])

HSP 1 Score: 646.4 bits (1666), Expect = 4.500e-182
Identity = 348/509 (68.37%), Postives = 413/509 (81.14%), Query Frame = 1


		  
Query: 45  MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQ----YQIAPTKNVIVAKKTTNF-- 104
           MMATAAV+GL+AGKRLLSS+FYYSD TEKLS + E     YQI  TK +IVAKK++N+  
Sbjct: 1   MMATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGP 60

Query: 105 -----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSML 164
                N    SIKAL+E +D  + P  A       + +EEE+ D +  +EALLLLQKSML
Sbjct: 61  SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 120

Query: 165 ENQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVV--- 224
           E Q  LSFER   +D     + K+  VT SG  AR RRIN ++++  +SK  +   V   
Sbjct: 121 EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 180

Query: 225 ---TVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEP 284
               VSPELLQNR  GYV+G+ S+ LL+HA+VV LSR I+AGLSLE+HKSRLKE+LGC+P
Sbjct: 181 LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 240

Query: 285 SDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGL 344
           SDEQ+A SLK++RAE++SK I CSLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGGL
Sbjct: 241 SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300

Query: 345 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTK 404
           IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HL+ERL LIR+AK +
Sbjct: 301 IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 360

Query: 405 LEEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADN 464
           LEEKG+TP++D+IAESLN+S KKV+NATEAV  V S DRE FPSLNGLPGET+HSYIADN
Sbjct: 361 LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 465 RLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRE 524
            LENNPWH VD+WALK +V+ LI+ TL+ERE++IIRLYYGLD+ESLTWE+ISKRIGLSRE
Sbjct: 421 CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 480

Query: 525 RVRQVGLVALEKLKHAARKRRMEALLVKH 537
           RVRQVGLVALEKLKHAARK+++EA+LVKH
Sbjct: 481 RVRQVGLVALEKLKHAARKKKLEAMLVKH 509

[Close]

BLAST of Spo20756.1 vs. NCBI nr
Match: gi|223536754|gb|EEF38395.1| (RNA polymerase sigma factor rpoD, putative [Ricinus communis])

HSP 1 Score: 644.4 bits (1661), Expect = 1.700e-181
Identity = 347/508 (68.31%), Postives = 412/508 (81.10%), Query Frame = 1


		  
Query: 46  MATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQ----YQIAPTKNVIVAKKTTNF--- 105
           MATAAV+GL+AGKRLLSS+FYYSD TEKLS + E     YQI  TK +IVAKK++N+   
Sbjct: 1   MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 106 ----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLE 165
               N    SIKAL+E +D  + P  A       + +EEE+ D +  +EALLLLQKSMLE
Sbjct: 61  FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 166 NQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVV---- 225
            Q  LSFER   +D     + K+  VT SG  AR RRIN ++++  +SK  +   V    
Sbjct: 121 KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 226 --TVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPS 285
              VSPELLQNR  GYV+G+ S+ LL+HA+VV LSR I+AGLSLE+HKSRLKE+LGC+PS
Sbjct: 181 KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 286 DEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLI 345
           DEQ+A SLK++RAE++SK I CSLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGGLI
Sbjct: 241 DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 346 GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKL 405
           GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HL+ERL LIR+AK +L
Sbjct: 301 GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 406 EEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNR 465
           EEKG+TP++D+IAESLN+S KKV+NATEAV  V S DRE FPSLNGLPGET+HSYIADN 
Sbjct: 361 EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 466 LENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRER 525
           LENNPWH VD+WALK +V+ LI+ TL+ERE++IIRLYYGLD+ESLTWE+ISKRIGLSRER
Sbjct: 421 LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRER 480

Query: 526 VRQVGLVALEKLKHAARKRRMEALLVKH 537
           VRQVGLVALEKLKHAARK+++EA+LVKH
Sbjct: 481 VRQVGLVALEKLKHAARKKKLEAMLVKH 508

[Close]

BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QT09_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_149960 PE=4 SV=1)

HSP 1 Score: 950.7 bits (2456), Expect = 7.800e-274
Identity = 491/492 (99.80%), Postives = 492/492 (100.00%), Query Frame = 1


		  
Query: 45  MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS 104
           MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS
Sbjct: 1   MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHRGSS 60

Query: 105 IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP 164
           IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP
Sbjct: 61  IKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSFERP 120

Query: 165 GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY 224
           GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY
Sbjct: 121 GINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIGY 180

Query: 225 VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR 284
           VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR
Sbjct: 181 VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR 240

Query: 285 SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK 344
           SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK
Sbjct: 241 SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK 300

Query: 345 ISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEEKGITPTVDKIAESL 404
           ISTYVYWWIRQGVSRALVENSRTLRLPTHL+ERLSLIRSAKTKLEEKGITPTVDKIAESL
Sbjct: 301 ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRSAKTKLEEKGITPTVDKIAESL 360

Query: 405 NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ 464
           NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ
Sbjct: 361 NMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQ 420

Query: 465 DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA 524
           DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA
Sbjct: 421 DVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLVALEKLKHAA 480

Query: 525 RKRRMEALLVKH 537
           RKRRMEALLVKH
Sbjct: 481 RKRRMEALLVKH 492

[Close]

BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FLY9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043660 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 3.600e-234
Identity = 429/501 (85.63%), Postives = 457/501 (91.22%), Query Frame = 1


		  
Query: 42  FSLMMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQYQIAPTKNVIVAKKTTNFNHR 101
           F L MATAAVVGL+AG+RLLSSSF YSD TEKLSY+GEQ+QI PTK VIVAK+T NFN R
Sbjct: 2   FRLTMATAAVVGLSAGQRLLSSSFCYSDLTEKLSYTGEQHQITPTKTVIVAKRTANFNQR 61

Query: 102 GSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQLELSF 161
           GSS+KAL+ECIDGT IPP +E W P SSPLEEE   PETPLEALLLLQKSMLE QLELSF
Sbjct: 62  GSSVKALKECIDGTVIPPTSETWNPGSSPLEEENSSPETPLEALLLLQKSMLEKQLELSF 121

Query: 162 ERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQ------VESKREIPPVVTVSPE 221
           ER  + DM RE T K SHVT+SG PARVRRINAKKRSQ       ES+R  PP+ TVSPE
Sbjct: 122 ERNSMTDMPRECTSKGSHVTASGIPARVRRINAKKRSQGKKIFTKESERGKPPMATVSPE 181

Query: 222 LLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANS 281
           LLQNRSIGYVRG+TSD LLTHAQVVNLS+KI+AGLSLE+ KSRLKEKLGCEPSDEQLANS
Sbjct: 182 LLQNRSIGYVRGLTSDELLTHAQVVNLSQKIKAGLSLEDQKSRLKEKLGCEPSDEQLANS 241

Query: 282 LKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIE 341
           L+MNRAEVRSK+IECSLAREKLAMSNVRLVMSIAQRYENMGADM DLVQGGLIGLLRGIE
Sbjct: 242 LRMNRAEVRSKLIECSLAREKLAMSNVRLVMSIAQRYENMGADMTDLVQGGLIGLLRGIE 301

Query: 342 KFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEEKGITP 401
           KFDSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLPTHL+ERLSLIRSAK KLEEKGITP
Sbjct: 302 KFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRSAKNKLEEKGITP 361

Query: 402 TVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWH 461
           ++D+IAESLNMSHKK+KNATEAVRSVLS DRE FPSLNGLPGET+HSYIADNRLENNPWH
Sbjct: 362 SIDRIAESLNMSHKKIKNATEAVRSVLSLDREVFPSLNGLPGETFHSYIADNRLENNPWH 421

Query: 462 CVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVRQVGLV 521
            VDEWALK +VSNLIDT LREREK+IIRLYYGL+DESLTWEEISKRIGLSRERVRQVGLV
Sbjct: 422 GVDEWALKHEVSNLIDTALREREKEIIRLYYGLEDESLTWEEISKRIGLSRERVRQVGLV 481

Query: 522 ALEKLKHAARKRRMEALLVKH 537
           ALEKLKHAARKRRMEALLVKH
Sbjct: 482 ALEKLKHAARKRRMEALLVKH 502

[Close]

BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
Match: A0A061F045_THECC (Sigma factor A isoform 1 OS=Theobroma cacao GN=TCM_025640 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 4.900e-183
Identity = 350/508 (68.90%), Postives = 409/508 (80.51%), Query Frame = 1


		  
Query: 45  MMATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGE----QYQIAPTKNVIVAKKTTNF-- 104
           MMATAAV+GL  GKRLLSSSF YSD  EKLSY+ +     +Q + TK++IVAKK++N   
Sbjct: 1   MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 105 -----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSML 164
                N R  SIKAL+E +D  +I   AEP    S+ LE E+ D +  +EALLLLQKSML
Sbjct: 61  SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 165 ENQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVVT-- 224
           E Q  LSFER    +       K+  VT SG  AR RR N K++  +++K  I P     
Sbjct: 121 EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQL 180

Query: 225 ---VSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPS 284
              +SPELLQ+R  GYV+G+ SD LL+HA+VV LS+KI+AGLSLEEH+ RLKE+LGCEPS
Sbjct: 181 RSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPS 240

Query: 285 DEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLI 344
           DEQLA SLK++RAE+RSK+IECSLAREKLAMSNVRLVMSIAQRY+NMGA+M+DL+QGGLI
Sbjct: 241 DEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLI 300

Query: 345 GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKL 404
           GLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHL+ERL LIR+AK +L
Sbjct: 301 GLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRL 360

Query: 405 EEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNR 464
           EEKGITPT+D+IAESLNMS KKV+NATEAV  V S DR+ FPSLNGLPGET+HSYIADN 
Sbjct: 361 EEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADNH 420

Query: 465 LENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRER 524
           +EN PWH VDEWALK +V+ LI  TL ERE++IIRLYYGLD ESLTWE+ISKRIGLSRER
Sbjct: 421 VENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRER 480

Query: 525 VRQVGLVALEKLKHAARKRRMEALLVKH 537
           VRQVGLVALEKLKHAARK++MEA+LVKH
Sbjct: 481 VRQVGLVALEKLKHAARKKKMEAMLVKH 508

[Close]

BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
Match: B9SDF8_RICCO (RNA polymerase sigma factor rpoD, putative OS=Ricinus communis GN=RCOM_1517450 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 1.200e-181
Identity = 347/508 (68.31%), Postives = 412/508 (81.10%), Query Frame = 1


		  
Query: 46  MATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQ----YQIAPTKNVIVAKKTTNF--- 105
           MATAAV+GL+AGKRLLSS+FYYSD TEKLS + E     YQI  TK +IVAKK++N+   
Sbjct: 1   MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 106 ----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLE 165
               N    SIKAL+E +D  + P  A       + +EEE+ D +  +EALLLLQKSMLE
Sbjct: 61  FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 166 NQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKRSQVESKREIPPVV---- 225
            Q  LSFER   +D     + K+  VT SG  AR RRIN ++++  +SK  +   V    
Sbjct: 121 KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 226 --TVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPS 285
              VSPELLQNR  GYV+G+ S+ LL+HA+VV LSR I+AGLSLE+HKSRLKE+LGC+PS
Sbjct: 181 KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 286 DEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLI 345
           DEQ+A SLK++RAE++SK I CSLAREKLAMSNVRLVMSIAQRY+NMGA+MADLVQGGLI
Sbjct: 241 DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 346 GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKL 405
           GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLP HL+ERL LIR+AK +L
Sbjct: 301 GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 406 EEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNR 465
           EEKG+TP++D+IAESLN+S KKV+NATEAV  V S DRE FPSLNGLPGET+HSYIADN 
Sbjct: 361 EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 466 LENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRER 525
           LENNPWH VD+WALK +V+ LI+ TL+ERE++IIRLYYGLD+ESLTWE+ISKRIGLSRER
Sbjct: 421 LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRER 480

Query: 526 VRQVGLVALEKLKHAARKRRMEALLVKH 537
           VRQVGLVALEKLKHAARK+++EA+LVKH
Sbjct: 481 VRQVGLVALEKLKHAARKKKLEAMLVKH 508

[Close]

BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
Match: A0A0G2SY45_9ROSI (Sigma factor OS=Melianthus villosus GN=sig1 PE=2 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 4.600e-181
Identity = 335/506 (66.21%), Postives = 410/506 (81.03%), Query Frame = 1


		  
Query: 46  MATAAVVGLNAGKRLLSSSFYYSDFTEKLSYSGEQ--YQIAPTKNVIVAKKTTNF----- 105
           MATAAV+GL+AGKRLLSSS YYSD+ EKLSY+ +   Y   PTK V++AKK++N      
Sbjct: 1   MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDHGHYNATPTKTVVIAKKSSNCSPRFP 60

Query: 106 --NHRGSSIKALRECIDGTTIPPIAEPWIPRSSPLEEETLDPETPLEALLLLQKSMLENQ 165
             N +  SIKAL+E +D  + P  AE W  RS+ ++E+  D E  +EALLLLQKSMLE Q
Sbjct: 61  SSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSMLEKQ 120

Query: 166 LELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKR------SQVESKREIPPVV 225
             LSF++  + D+ +E TCK   VT SG  AR RR++ K++      S +++ R      
Sbjct: 121 WNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENSSMMQTSRCNRLRT 180

Query: 226 TVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDE 285
            + PEL+QNR  GYV+G+ S+ LL+HA+VV+LS+KI+ GLSLEEHK RLK++LGCEPSDE
Sbjct: 181 IIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEPSDE 240

Query: 286 QLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGL 345
           QLA SL+++RAE+RSK IE  LAREKLAMSNVRLVMSIAQRY+NMGA+M+DLVQGGLIGL
Sbjct: 241 QLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGL 300

Query: 346 LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEE 405
           LRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSRTLRLPTHL+ERL LIR+AK +LEE
Sbjct: 301 LRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKIRLEE 360

Query: 406 KGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLE 465
           KGITP+++++AE LNMS KK++NATEA+  V S DRE FPSLNGLPGET+HSYIADN L+
Sbjct: 361 KGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLD 420

Query: 466 NNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLSRERVR 525
           NNPWH VDEWALK +V  LI+ TL ERE++IIRLY+GLD+E LTWE+ISKRIGLSRERVR
Sbjct: 421 NNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRERVR 480

Query: 526 QVGLVALEKLKHAARKRRMEALLVKH 537
           QVGLVA+EKLKHAAR++ MEA+LVKH
Sbjct: 481 QVGLVAMEKLKHAARRKHMEAMLVKH 506

[Close]

BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
Match: SIGA_ARATH (RNA polymerase sigma factor sigA OS=Arabidopsis thaliana GN=SIGA PE=1 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 2.700e-166
Identity = 323/511 (63.21%), Postives = 393/511 (76.91%), Query Frame = 1


		  
Query: 46  MATAAVVGLNAGKRLLSSSFYYSDFTEKL----SYSGEQYQIAPTKNVIVAKKTTNF--- 105
           MATAAV+GLN GKRLLSSSFY+SD TEK      +   QY IA TK+ I AKK +N+   
Sbjct: 1   MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASNYSPS 60

Query: 106 ----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSP--LEEETLDPET----PLEALLLL 165
               N    S KAL+E +D   +    +PW+P  +   LEEE  D +      +EA+LLL
Sbjct: 61  FPSSNRHTQSAKALKESVD---VASTEKPWLPNGTDKELEEECYDDDDLISHSVEAILLL 120

Query: 166 QKSMLENQLELSFERPGINDMFRENTCKESH---VTSSGTPARVRRINAKKRSQVESKRE 225
           QKSMLE    LSFE+   ++   + T ++     +T SG  AR RRI AKK      K  
Sbjct: 121 QKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKK------KTN 180

Query: 226 IPPVVTVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGC 285
           +  V  VS      +  GYV+G+ S+ +L+H +VV LS+KI++GL L++HKSRLK++LGC
Sbjct: 181 MTHVKAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGC 240

Query: 286 EPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQG 345
           EPSDEQLA SLK++RAE+++ ++EC LAREKLAMSNVRLVMSIAQRY+N+GA+M+DLVQG
Sbjct: 241 EPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQG 300

Query: 346 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAK 405
           GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHL+ERL LIR+AK
Sbjct: 301 GLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAK 360

Query: 406 TKLEEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIA 465
            +L+EKGITP++D+IAESLNMS KKV+NATEAV  V S DR+ FPSLNGLPGET+HSYIA
Sbjct: 361 LRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIA 420

Query: 466 DNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLS 525
           D RLENNPWH  D+ ALK++VS LI  TL EREK+IIRLYYGLD E LTWE+ISKRIGLS
Sbjct: 421 DTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLS 480

Query: 526 RERVRQVGLVALEKLKHAARKRRMEALLVKH 537
           RERVRQVGLVALEKLKHAARKR+MEA+++K+
Sbjct: 481 RERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[Close]

BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
Match: SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigA PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.800e-45
Identity = 131/390 (33.59%), Postives = 203/390 (52.05%), Query Frame = 1


		  
Query: 138 PETPLEALLLLQKSMLENQLELSFERPGINDMFRENTCKESHVTSSGTPARVRRINAKKR 197
           PE  L+ LL+      E   +L     G  D F E    E    S       RR  +KK+
Sbjct: 22  PEIELDDLLI------EEDEDLLLADDGDIDEFLEPQTDEDDAKSGKAAKSRRRTQSKKK 81

Query: 198 SQVESKREIPPVVTVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKS 257
              E               L  + IG +R + +D      + + L+RKI   L LE  + 
Sbjct: 82  HYTEDSIR-----------LYLQEIGRIRLLRAD------EEIELARKIADLLELERVRE 141

Query: 258 RLKEKLGCEPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGA 317
           RL EKL  +P D + A ++++     R ++     A++K+  SN+RLV+SIA++Y N G 
Sbjct: 142 RLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAKKYMNRGL 201

Query: 318 DMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYER 377
              DL+Q G +GL+R  EKFD  KG+K STY  WWIRQ ++RA+ + SRT+RLP HLYE 
Sbjct: 202 SFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYET 261

Query: 378 LSLI-RSAKTKLEEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLP 437
           +S I ++ K   +E G  PT ++IA  + M+ +K++   ++ +  +S +       +   
Sbjct: 262 ISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRL 321

Query: 438 GETYHSYIADNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESL-TW 497
           G+   S          P   V +  L++D+  ++D +L  RE+D++RL YGLDD  + T 
Sbjct: 322 GDFIESD------GETPEDQVSKNLLREDLEKVLD-SLSPRERDVLRLRYGLDDGRMKTL 381

Query: 498 EEISKRIGLSRERVRQVGLVALEKLKHAAR 526
           EEI +   ++RER+RQ+   AL KL+H  R
Sbjct: 382 EEIGQIFNVTRERIRQIEAKALRKLRHPNR 381

[Close]

BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
Match: SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA1 PE=3 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 3.400e-44
Identity = 117/334 (35.03%), Postives = 187/334 (55.99%), Query Frame = 1


		  
Query: 201 ESKREIPPVVTVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLK 260
           ++K ++    T     L  + IG +R + +D      + + L+R+I   L+LE  +  L 
Sbjct: 77  KAKAKVRKTYTEDSIRLYLQEIGRIRLLRAD------EEIELARQIADLLALERIRDELL 136

Query: 261 EKLGCEPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMA 320
           E+L   PSD + A ++     E R ++     A++K+  SN+RLV+SIA++Y N G    
Sbjct: 137 EQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQ 196

Query: 321 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSL 380
           DL+Q G +GL+R  EKFD  KG+K STY  WWIRQ ++RA+ + SRT+RLP HLYE +S 
Sbjct: 197 DLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETISR 256

Query: 381 I-RSAKTKLEEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFD----REPFPSLNGL 440
           I ++ K   +E G  PT ++IA  + M+ +K++   ++ +  +S +    +E    L   
Sbjct: 257 IKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDF 316

Query: 441 ---PGETYHSYIADNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDES 500
               GET    +A N              L++D+  ++ +TL  RE+D++RL YGLDD  
Sbjct: 317 IEADGETPEDEVAKN-------------LLREDLEGVL-STLSPRERDVLRLRYGLDDGR 376

Query: 501 L-TWEEISKRIGLSRERVRQVGLVALEKLKHAAR 526
           + T EEI +   ++RER+RQ+   AL KL+H  R
Sbjct: 377 MKTLEEIGQLFNVTRERIRQIEAKALRKLRHPNR 390

[Close]

BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
Match: SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 9.800e-44
Identity = 132/396 (33.33%), Postives = 217/396 (54.80%), Query Frame = 1


		  
Query: 150 KSMLENQLELSFERPGINDMFRENTCKESHV--------TSSGTPARVRRINAKKRSQVE 209
           +S  + ++EL  E+P ++   R     E           T+SG P+       K  S  +
Sbjct: 192 ESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPS------VKTGSSPK 251

Query: 210 SKREIPPVVTVSPELLQNRSIGYVRGMTSDV-LLTHAQVVNLSRKIEAGLSLEEHKSRLK 269
            KR       V+ E+  N  + Y+R  TS   LLT  +   LS  I+  L LE  ++ L 
Sbjct: 252 KKR------LVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELT 311

Query: 270 EKLGCEPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMA 329
           E+ G +P+  Q A++  +++  +R +I   +L ++K+  SN+RLV+SIA+ Y+  G ++ 
Sbjct: 312 ERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQ 371

Query: 330 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSL 389
           DLVQ G  GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E    
Sbjct: 372 DLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYR 431

Query: 390 IRSAKTKL-EEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGET 449
           ++ A+ +L  E G  P  ++IAE+  +S K++     + +   S D++   + N  P E 
Sbjct: 432 VKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV 491

Query: 450 YHSYIADNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESL-TWEEI 509
               IAD     +    + E+ ++QD+  ++D +L  REK +IR  +G++D  + T +EI
Sbjct: 492 ----IADPEAVTSEDILIKEF-MRQDLDKVLD-SLGTREKQVIRWRFGMEDGRMKTLQEI 551

Query: 510 SKRIGLSRERVRQVGLVALEKLKHAARKRRMEALLV 535
            + +G+SRERVRQ+   A  KLK+  R   ++  LV
Sbjct: 552 GEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569

[Close]

BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
Match: SIGA2_SYNE7 (RNA polymerase sigma factor SigA2 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA2 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.400e-43
Identity = 107/319 (33.54%), Postives = 199/319 (62.38%), Query Frame = 1


		  
Query: 213 SPELLQN--RSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDE 272
           SP+L++   + IG VR      LLT  + +   R+++  + L + ++ L+++LG EPS E
Sbjct: 9   SPDLVRAYLQEIGRVR------LLTAEEELCFGRQVQRLMMLLDAQTELRDRLGHEPSKE 68

Query: 273 QLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGL 332
           + A ++ +N  ++  +I +   A+ K+  +N+RLV+SIA++Y+    +  DL+Q G +GL
Sbjct: 69  EWAAAVDLNLEDLDRQIEQGQRAKRKMIEANLRLVVSIAKKYQKRHMEFLDLIQEGTLGL 128

Query: 333 LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEE 392
            RG+EKFD SKG+K STY YWWIRQ ++RA+ + SRT+RLP H+ E+L+ ++  + +L +
Sbjct: 129 ERGVEKFDPSKGYKFSTYAYWWIRQAITRAIAQQSRTIRLPIHITEKLNKLKKTQRELSQ 188

Query: 393 K-GITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIAD--N 452
           + G + T  ++AE L +         E VR  +  +R+P  SL+   G++  + + +   
Sbjct: 189 QLGRSATASELAEVLEL-------PLEQVREYIQMNRQPV-SLDVKVGDSQDTELQELLE 248

Query: 453 RLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDD-ESLTWEEISKRIGLSR 512
             +++P   V++ +L++D+ NL+   L  +++ +I L YGLD+ +SL+  ++ +R+ +SR
Sbjct: 249 DEQSSPSDYVEQESLRRDLRNLM-AELTPQQQAVIALRYGLDEGDSLSLAKVGERLNISR 308

Query: 513 ERVRQVGLVALEKLKHAAR 526
           ERVR++   A++ L+  +R
Sbjct: 309 ERVRKLERQAMDHLRRRSR 312

[Close]

BLAST of Spo20756.1 vs. TAIR (Arabidopsis)
Match: AT1G64860.1 (sigma factor A)

HSP 1 Score: 586.6 bits (1511), Expect = 1.500e-167
Identity = 323/511 (63.21%), Postives = 393/511 (76.91%), Query Frame = 1


		  
Query: 46  MATAAVVGLNAGKRLLSSSFYYSDFTEKL----SYSGEQYQIAPTKNVIVAKKTTNF--- 105
           MATAAV+GLN GKRLLSSSFY+SD TEK      +   QY IA TK+ I AKK +N+   
Sbjct: 1   MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASNYSPS 60

Query: 106 ----NHRGSSIKALRECIDGTTIPPIAEPWIPRSSP--LEEETLDPET----PLEALLLL 165
               N    S KAL+E +D   +    +PW+P  +   LEEE  D +      +EA+LLL
Sbjct: 61  FPSSNRHTQSAKALKESVD---VASTEKPWLPNGTDKELEEECYDDDDLISHSVEAILLL 120

Query: 166 QKSMLENQLELSFERPGINDMFRENTCKESH---VTSSGTPARVRRINAKKRSQVESKRE 225
           QKSMLE    LSFE+   ++   + T ++     +T SG  AR RRI AKK      K  
Sbjct: 121 QKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKK------KTN 180

Query: 226 IPPVVTVSPELLQNRSIGYVRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGC 285
           +  V  VS      +  GYV+G+ S+ +L+H +VV LS+KI++GL L++HKSRLK++LGC
Sbjct: 181 MTHVKAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGC 240

Query: 286 EPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQG 345
           EPSDEQLA SLK++RAE+++ ++EC LAREKLAMSNVRLVMSIAQRY+N+GA+M+DLVQG
Sbjct: 241 EPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQG 300

Query: 346 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAK 405
           GLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHL+ERL LIR+AK
Sbjct: 301 GLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAK 360

Query: 406 TKLEEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIA 465
            +L+EKGITP++D+IAESLNMS KKV+NATEAV  V S DR+ FPSLNGLPGET+HSYIA
Sbjct: 361 LRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIA 420

Query: 466 DNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESLTWEEISKRIGLS 525
           D RLENNPWH  D+ ALK++VS LI  TL EREK+IIRLYYGLD E LTWE+ISKRIGLS
Sbjct: 421 DTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLS 480

Query: 526 RERVRQVGLVALEKLKHAARKRRMEALLVKH 537
           RERVRQVGLVALEKLKHAARKR+MEA+++K+
Sbjct: 481 RERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[Close]

BLAST of Spo20756.1 vs. TAIR (Arabidopsis)
Match: AT1G08540.1 (RNApolymerase sigma subunit 2)

HSP 1 Score: 179.5 bits (454), Expect = 5.500e-45
Identity = 132/396 (33.33%), Postives = 217/396 (54.80%), Query Frame = 1


		  
Query: 150 KSMLENQLELSFERPGINDMFRENTCKESHV--------TSSGTPARVRRINAKKRSQVE 209
           +S  + ++EL  E+P ++   R     E           T+SG P+       K  S  +
Sbjct: 192 ESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPS------VKTGSSPK 251

Query: 210 SKREIPPVVTVSPELLQNRSIGYVRGMTSDV-LLTHAQVVNLSRKIEAGLSLEEHKSRLK 269
            KR       V+ E+  N  + Y+R  TS   LLT  +   LS  I+  L LE  ++ L 
Sbjct: 252 KKR------LVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELT 311

Query: 270 EKLGCEPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMA 329
           E+ G +P+  Q A++  +++  +R +I   +L ++K+  SN+RLV+SIA+ Y+  G ++ 
Sbjct: 312 ERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQ 371

Query: 330 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSL 389
           DLVQ G  GL+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E    
Sbjct: 372 DLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYR 431

Query: 390 IRSAKTKL-EEKGITPTVDKIAESLNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGET 449
           ++ A+ +L  E G  P  ++IAE+  +S K++     + +   S D++   + N  P E 
Sbjct: 432 VKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV 491

Query: 450 YHSYIADNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDIIRLYYGLDDESL-TWEEI 509
               IAD     +    + E+ ++QD+  ++D +L  REK +IR  +G++D  + T +EI
Sbjct: 492 ----IADPEAVTSEDILIKEF-MRQDLDKVLD-SLGTREKQVIRWRFGMEDGRMKTLQEI 551

Query: 510 SKRIGLSRERVRQVGLVALEKLKHAARKRRMEALLV 535
            + +G+SRERVRQ+   A  KLK+  R   ++  LV
Sbjct: 552 GEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569

[Close]

BLAST of Spo20756.1 vs. TAIR (Arabidopsis)
Match: AT2G36990.1 (RNApolymerase sigma-subunit F)

HSP 1 Score: 152.5 bits (384), Expect = 7.200e-37
Identity = 105/351 (29.91%), Postives = 188/351 (53.56%), Query Frame = 1


		  
Query: 188 RVRRINAKKRSQVESKREIPPVVTVSPELLQNRSIG-----YVRGMTSDVLLTHAQVVNL 247
           R +   A K + V+ +  +P   +   +  Q          ++ G  +  LLT  +   L
Sbjct: 197 RAKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAEL 256

Query: 248 SRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVRSKIIECSLAREKLAMSNV 307
              I+  L LE+ K++L+ + GCEP+  + A ++ ++   ++S I     +REKL  +N+
Sbjct: 257 ISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANL 316

Query: 308 RLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV 367
           RLV+ IA++Y+N G +  DL+Q G +GL++ +EKF    G + +TY YWWIRQ + +++ 
Sbjct: 317 RLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIF 376

Query: 368 ENSRTLRLPTHLYERLSLIRSA-KTKLEEKGITPTVDKIAESLNMSHKKVKNATEAVRSV 427
           +NSRT+RLP ++Y  L  +  A KT ++E    P+ +++A  + +S +K+       R+ 
Sbjct: 377 QNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTP 436

Query: 428 LSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALKQDVSNLIDTTLREREKDI 487
           LS  +  +   +     T+     D+ +E  P   V +  ++  V NL++  L  +E+ I
Sbjct: 437 LSMQQPIWSDQD----TTFQEITPDSGIE-TPTMSVGKQLMRNHVRNLLN-VLSPKERRI 496

Query: 488 IRLYYGLD-DESLTWEEISKRIGLSRERVRQVGLVALEKLKHAARKRRMEA 532
           I+L +G+D  +  +  EI +  GLS+ERVRQ+   AL +LK       + A
Sbjct: 497 IKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHA 541

[Close]

BLAST of Spo20756.1 vs. TAIR (Arabidopsis)
Match: AT5G13730.1 (sigma factor 4)

HSP 1 Score: 152.1 bits (383), Expect = 9.500e-37
Identity = 103/300 (34.33%), Postives = 160/300 (53.33%), Query Frame = 1


		  
Query: 225 VRGMTSDVLLTHAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVR 284
           V G +    L+  + V L   ++ G  LE   + ++E    E     LA+     +    
Sbjct: 114 VVGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEEN---EMVSVLLASGRGKKKRSAN 173

Query: 285 SKIIECSLAREKLAMSNVRLVMSIAQRYENMGADMADLVQGGLIGLLRGIEKFDSSKGFK 344
             +     AREK+     RLV+SIA  Y+  G ++ DL+Q G IGLLRG E+FD  +G+K
Sbjct: 174 EILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYK 233

Query: 345 ISTYVYWWIRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKLEEK-GITPTVDKIAES 404
           +STYVYWWI+Q + RA+   SR ++LP  ++E  + +  A   L  K    P+ ++IAE 
Sbjct: 234 LSTYVYWWIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEH 293

Query: 405 LNMSHKKVKNATEAVRSVLSFDREPFPSLNGLPGETYHSYIADNRLENNPWHCVDEWALK 464
           LN++   V+ A E  RS +S DR     +    G      I     E  P   V    +K
Sbjct: 294 LNLNVSAVRLAVERSRSPVSLDR-----VASQNGRMTLQEIVRGPDETRPEEMVKREHMK 353

Query: 465 QDVSNLIDTTLREREKDIIRLYYGLDDES-LTWEEISKRIGLSRERVRQVGLVALEKLKH 523
            ++  L+  +L  RE  ++ LY+GL+ E+ +++EEI K + LSRERVRQ+  +AL+KL++
Sbjct: 354 HEIEQLLG-SLTARESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRN 404

[Close]

BLAST of Spo20756.1 vs. TAIR (Arabidopsis)
Match: AT5G24120.1 (sigma factor E)

HSP 1 Score: 115.2 bits (287), Expect = 1.300e-25
Identity = 97/300 (32.33%), Postives = 153/300 (51.00%), Query Frame = 1


		  
Query: 236 HAQVVNLSRKIEAGLSLEEHKSRLKEKLGCEPSDEQLANSLKMNRAEVRSKIIECSLARE 295
           HA +  L + ++A   L E K  L++ LG EP + ++A  + M   EV+ KI     AR 
Sbjct: 225 HAWLFKLMQPMKA---LLEVKDVLQKSLGREPREAEIAGEINMTAGEVKKKIEIGRAARN 284

Query: 296 KLAMSNVRLVMSIAQRYENM---GADMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 355
           KL   N+RLV+ +  +Y +    G    DL Q G+ GL+  I++F+  + F++STY  +W
Sbjct: 285 KLIKHNLRLVLFVMNKYFHEFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLSTYGLFW 344

Query: 356 IRQGVSRALVENSRTLRLPTHLYERLSLIRSAKTKL-EEKGITPTVDKIAESLNMSHKKV 415
           IR  + R++  ++ T R+P  L      I  AKT+L  E G  PT D++ E L ++ ++ 
Sbjct: 345 IRHAIIRSMTTSNFT-RVPFGLESVRVEIYKAKTELWFEMGRPPTEDEVVERLKITPERY 404

Query: 416 KNATEAVRSVLSFDREPFPSLNGLPGETYHSYI-----ADNRLENNPWHCVDEWALKQDV 475
           +    A + VL        SLN     T   +I      D    NN         L+  +
Sbjct: 405 REVLRAAKPVL--------SLNSKHSVTQEEFINGITDVDGVGANNSRQPA---LLRLAL 464

Query: 476 SNLIDTTLREREKDIIRLYYGLDDE-SLTWEEISKRIGLSRERVRQVGLVALEKLKHAAR 526
            +++D +L+ +E  +IR  YGLD +   T  EI+  + +SRE VR+  + AL KLKH AR
Sbjct: 465 DDVLD-SLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQAR 508

The following BLAST results are available for this feature:

BLAST of Spo20756.1 vs. NCBI nr
BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
BLAST of Spo20756.1 vs. TAIR (Arabidopsis)

BLAST of Spo20756.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902181912\|gb\|KNA09828.1\|	1.1e-273	99.8	hypothetical protein SOVF_1499...	[more]
gi\|731320363\|ref\|XP_010670766.1\|	5.1e-234	85.6	PREDICTED: RNA polymerase sigm...	[more]
gi\|590639776\|ref\|XP_007029766.1\|	7.0e-183	68.9	Sigma factor A isoform 1 [Theo...	[more]
gi\|1000955819\|ref\|XP_002524027.2\|	4.5e-182	68.3	PREDICTED: RNA polymerase sigm...	[more]
gi\|223536754\|gb\|EEF38395.1\|	1.7e-181	68.3	RNA polymerase sigma factor rp...	[more]

BLAST of Spo20756.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QT09_SPIOL	7.8e-274	99.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8FLY9_BETVU	3.6e-234	85.6	Uncharacterized protein OS=Bet...	[more]
A0A061F045_THECC	4.9e-183	68.9	Sigma factor A isoform 1 OS=Th...	[more]
B9SDF8_RICCO	1.2e-181	68.3	RNA polymerase sigma factor rp...	[more]
A0A0G2SY45_9ROSI	4.6e-181	66.2	Sigma factor OS=Melianthus vil...	[more]

BLAST of Spo20756.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SIGA_ARATH	2.7e-166	63.2	RNA polymerase sigma factor si...	[more]
SIGA_NOSS1	1.8e-45	33.5	RNA polymerase sigma factor Si...	[more]
SIGA1_SYNE7	3.4e-44	35.0	RNA polymerase sigma factor Si...	[more]
SIGB_ARATH	9.8e-44	33.3	RNA polymerase sigma factor si...	[more]
SIGA2_SYNE7	6.4e-43	33.5	RNA polymerase sigma factor Si...	[more]

BLAST of Spo20756.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G64860.1	1.5e-167	63.2	sigma factor A	[more]
AT1G08540.1	5.5e-45	33.3	RNApolymerase sigma subunit 2	[more]
AT2G36990.1	7.2e-37	29.9	RNApolymerase sigma-subunit F	[more]
AT5G13730.1	9.5e-37	34.3	sigma factor 4	[more]
AT5G24120.1	1.3e-25	32.3	sigma factor E	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000943	RNA polymerase sigma-70	PRINTS	PR00046	SIGMA70FCT	coord: 321..334 score: 2.7E-18coord: 509..520 score: 2.7E-18coord: 494..509 score: 2.7E-18coord: 345..353 score: 2.7E-18coord: 474..486 score: 2.7
IPR000943	RNA polymerase sigma-70	PROSITE	PS00715	SIGMA70_1	coord: 321..334 scor
IPR007624	RNA polymerase sigma-70 region 3	PFAM	PF04539	Sigma70_r3	coord: 376..446 score: 1.2
IPR007627	RNA polymerase sigma-70 region 2	PFAM	PF04542	Sigma70_r2	coord: 299..366 score: 7.2
IPR007630	RNA polymerase sigma-70 region 4	PFAM	PF04545	Sigma70_r4	coord: 473..522 score: 4.5
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	1.10.10.10		coord: 472..532 score: 5.8E-18coord: 367..419 score: 3.
IPR013324	RNA polymerase sigma factor, region 3/4	unknown	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 369..425 score: 2.31E-6coord: 440..528 score: 1.05
IPR013325	RNA polymerase sigma factor, region 2	unknown	SSF88946	Sigma2 domain of RNA polymerase sigma factors	coord: 224..367 score: 1.29
IPR014284	RNA polymerase sigma-70 like domain	TIGRFAMs	TIGR02937	TIGR02937	coord: 293..523 score: 1.6
None	No IPR available	GENE3D	1.10.601.10		coord: 221..251 score: 1.4E-34coord: 289..366 score: 1.4
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 64..533 score: 1.2E
None	No IPR available	PANTHER	PTHR30603:SF14	RNA POLYMERASE SIGMA FACTOR SIGA	coord: 64..533 score: 1.2E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0050896	response to stimulus
cellular_component	GO:0009536	plastid
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016987	sigma factor activity