Spo20849.1 (mRNA) | SpinachBase

Overview


Name	Spo20849.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	cold regulated 314 thylakoid membrane 2
Location	Super_scaffold_120 : 1638318 .. 1641407 (-)
Sequence length	1255

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAATTTTTTCCAAAATTCCAAAAATAGTACAGGGAGATATTGACCACTACGTAACAGGATCTTGTCACCTCACATAAAATTGAAAGTGACAAGTGCATCACACTCCCGCCATTGCGCCACCCCTTTCGCGCACCATCATCTTACTAACACCCCCGCGGCCCCGCCCCCTTCCCCAACACATTCATCAACAAATTCAATTCAAACACTCAGAAATAATTTCATTGAAAAGTTAAAAAAAATATAATCAGCAAAAATGCAATCCCAATGTCTTTCTCTCTGCTCTTCTCCTCGTCTTTTCGCCGCCGTGGCCCCGCCCAAAGCTGTCTTCTCTTCTCTCCAACAGCGCCCTTCCCATTTTTCATGTCCTTCCTCTGTCAACTTTAATCCACTCAGGTGAATATTCTTTCTATCCTGCTTTTATAAAAGTTTGGAAAAAGGAAATAATGTAGACTAGATTTGATCCACAATACCAACTCCTATACTTTTCTAGTTAAGCTAGTTGACATTTTCTGGCTTTCATTAATATAACATATATTGACTATTGTTGTTATTTTAATCATTTTTTAAAATTCTTATGTGCTACTCCTATTGATTTAATTTTGTGCACAGATTGTCGCTGAATCACCAGAATTTGACGCTGAAGAACAGGAGTAAGCGATCTTCAATGGTTGTCAGTAACTCCTTATCTTCGATTATCTCTCCTCGAAATCTCCCATGGATTTCTGCCGTTTCTACTGCGTAATCATCACATCCCCTTGCTTTAATTCTTCGATTTTGCCTCTATAATTACTTGTGTCGATGACAAATATTATTGTTTGAATTTTAGAATTCGAATTCTCACAATAAATTTGCTGAAAATTATCATAATTTAAAGTTTAATCTGATTTTGTATTTCTGTTTTTGTTATCCATATGAGTTGATGACTACTTGATTTGATTGAAAGATTTTTCACAAACCTAGCAAAACGATGCTTGAATTCACCAAAATTTCTTTAGAAGAAGCTCCCCAAAGTTAATAATGAACATAGGCAATTGATGGAAGATTTCACAAACCTAGCAAAACGATGCTTGGATATCTTTTGTTCTTGCAAAGTGTTGAGATATGAATTGCTAGGATTTTGTTTCGTAATTTTGGCCAAAATAGGCAAGTGCACATCGGGATCAATCCGGCATTTTTGGTTTAATGGATTCATTTCCTATCTCAAACTGATGTGCAGTTAACAATCAGCTAAATTAGAGTGAGTACTTGGGGAATTTGAAAACCAGTATCTATAAATATTTAGTTCTCATGGATATAGGTGCTTCGGGCAAACATGTTTTGTACCGGTGAAGGTCTATTTATGTGCTTCTTCTTACATGTAACTTTTGCCTGGAAAATTCAACAGATAGATTACCCATATTACTCAAAATTTGATCGTGGTGATCATTCTTCAAGCTTACTTGTGAGGACCCTTGATGTCAAATGCAGTTTTGGAAGTATAGGCTTAAATCCCATATCGTGATTCTTCTGCTGTTGGCTATCAGCTTCTTGATTCATCTTTATGAAGCCATCTGATTGTTTCTTCTCTGCTTCGTACTTCAGATATTGATCTGAAAAAACTTATTTTGCACATTTTTATTTACATGTCATACATGTCTTCTTCTATCTCATGCATTTTCCATAGTGTAGAAACACAATTCAATTCCTTTATATATTTATTTGTTTGATCACAAGCTCACGTAATCCTTCTATCTGCTCAGGATTCTCATGCTCGTGAAAGGAACCCCAATACATAAGTCGTTTCTTGTGCCTCTTTTTGCTTTACAGGCACCTGCAAGTGTCATCGCGTGGATGCAGTAAGTTTTTGAAACTTGTTTTCGTTGTTTTGCTGTTCATGACTTTGAACCCCTCTTATATTTTTTGAAAAAGGTTTATGAGTTTTCTTTGCTTCATCAATTTTACAACGTAAGACTTATCTTCAATTTTCAGGGGAGAATATGGTGCTTGGGCAGCTTCTCTAGCCCTCCTTGCCCGCCTCTTCTTCTCTCTTCCAGGTGAGGGCTAAAAACAGTGACTATCATTTTCTCTTCCTCACCCTTTAGAGAACTAAGGAAATGAAATTACTATATATGTTTTAATTAGAGTATGTAAGCATACGTTAAGAGTACGTATGATGGCAATGTCATTAAATCTCCCCGTACTCCCCAATCCAACCCACTTCCACACACCAAAAAAAATGATAATGGAAATTGAAGTGGGTGTTGGGGAATGTAATGGCTAGCAAATTGACATAGGCATTTGAGTGCTTGAACCTTTCTTATCCCCCAAACTGTTTTATTAATGTCATTGATGTTTTTTTATGCATTTCTTTGATCTGTTTGTTCTATTCAGCTGTAGAATGTGCCACTTAATGCTAAGTTATCTTCCCATCCACCCCCCTTGATAGACCATCGATAGCCTGTAGCCTGTAGAGCTGTAGGTATCGATGCTGTTTAATGTCCTTATTTTTTAGTTCCTAACTCGTCTACTTTGTTTGTAGGTGAACTGGAACTCCCTTTCCTTACATTGGTTTTGGTAATTGTTGCTCCACGTCAAGCAATGAACCTAAGGGGGACACAGGCAGGAGCCATTATATCTTTAACAATTGCAGCCTTTTTGGCGTTCCAGCATTTTACAAACACTGGAGGTCTGCAGAAATCATTTGAGCAAGTTTCTATTGTTGCAACTTTAGCCATCATCTGTATCACCGTTGTGCCTGGCCTGCTATTGATTTGATTTTGATGTGGATCAAATTTGTCGACGTCATGTTTATCTTTTAGAAAAAGTAAATAAATTGTGAGTTTTGACAGTATTAGCTTCAGAACCTATGTTGTATATACCAGACAAATGAGTTCCATTGTCACTGTTTTTGTTGGTATATCCAATGAAAATAAAGGTTCTTTTTCACGCTATTCCTACATTTTCATTTGCAACACATTGATTATGCTTCCAATTACTAAGGAAGCTTAGTATCCTAATTATTTATCTGCATATGCAACCTTTATCTTGTCATTATTGAAGGGTGAAATCATAAGAAACTGGAGTTTGGGATAATTTTGTGAAAGTTGAA

mRNA sequence

TTAAATTTTTTCCAAAATTCCAAAAATAGTACAGGGAGATATTGACCACTACGTAACAGGATCTTGTCACCTCACATAAAATTGAAAGTGACAAGTGCATCACACTCCCGCCATTGCGCCACCCCTTTCGCGCACCATCATCTTACTAACACCCCCGCGGCCCCGCCCCCTTCCCCAACACATTCATCAACAAATTCAATTCAAACACTCAGAAATAATTTCATTGAAAAGTTAAAAAAAATATAATCAGCAAAAATGCAATCCCAATGTCTTTCTCTCTGCTCTTCTCCTCGTCTTTTCGCCGCCGTGGCCCCGCCCAAAGCTGTCTTCTCTTCTCTCCAACAGCGCCCTTCCCATTTTTCATGTCCTTCCTCTGTCAACTTTAATCCACTCAGATTGTCGCTGAATCACCAGAATTTGACGCTGAAGAACAGGAGTAAGCGATCTTCAATGGTTGTCAGTAACTCCTTATCTTCGATTATCTCTCCTCGAAATCTCCCATGGATTTCTGCCGTTTCTACTGCGATTCTCATGCTCGTGAAAGGAACCCCAATACATAAGTCGTTTCTTGTGCCTCTTTTTGCTTTACAGGCACCTGCAAGTGTCATCGCGTGGATGCAGGGAGAATATGGTGCTTGGGCAGCTTCTCTAGCCCTCCTTGCCCGCCTCTTCTTCTCTCTTCCAGGTGAACTGGAACTCCCTTTCCTTACATTGGTTTTGGTAATTGTTGCTCCACGTCAAGCAATGAACCTAAGGGGGACACAGGCAGGAGCCATTATATCTTTAACAATTGCAGCCTTTTTGGCGTTCCAGCATTTTACAAACACTGGAGGTCTGCAGAAATCATTTGAGCAAGTTTCTATTGTTGCAACTTTAGCCATCATCTGTATCACCGTTGTGCCTGGCCTGCTATTGATTTGATTTTGATGTGGATCAAATTTGTCGACGTCATGTTTATCTTTTAGAAAAAGTAAATAAATTGTGAGTTTTGACAGTATTAGCTTCAGAACCTATGTTGTATATACCAGACAAATGAGTTCCATTGTCACTGTTTTTGTTGGTATATCCAATGAAAATAAAGGTTCTTTTTCACGCTATTCCTACATTTTCATTTGCAACACATTGATTATGCTTCCAATTACTAAGGAAGCTTAGTATCCTAATTATTTATCTGCATATGCAACCTTTATCTTGTCATTATTGAAGGGTGAAATCATAAGAAACTGGAGTTTGGGATAATTTTGTGAAAGTTGAA

Coding sequence (CDS)

ATGCAATCCCAATGTCTTTCTCTCTGCTCTTCTCCTCGTCTTTTCGCCGCCGTGGCCCCGCCCAAAGCTGTCTTCTCTTCTCTCCAACAGCGCCCTTCCCATTTTTCATGTCCTTCCTCTGTCAACTTTAATCCACTCAGATTGTCGCTGAATCACCAGAATTTGACGCTGAAGAACAGGAGTAAGCGATCTTCAATGGTTGTCAGTAACTCCTTATCTTCGATTATCTCTCCTCGAAATCTCCCATGGATTTCTGCCGTTTCTACTGCGATTCTCATGCTCGTGAAAGGAACCCCAATACATAAGTCGTTTCTTGTGCCTCTTTTTGCTTTACAGGCACCTGCAAGTGTCATCGCGTGGATGCAGGGAGAATATGGTGCTTGGGCAGCTTCTCTAGCCCTCCTTGCCCGCCTCTTCTTCTCTCTTCCAGGTGAACTGGAACTCCCTTTCCTTACATTGGTTTTGGTAATTGTTGCTCCACGTCAAGCAATGAACCTAAGGGGGACACAGGCAGGAGCCATTATATCTTTAACAATTGCAGCCTTTTTGGCGTTCCAGCATTTTACAAACACTGGAGGTCTGCAGAAATCATTTGAGCAAGTTTCTATTGTTGCAACTTTAGCCATCATCTGTATCACCGTTGTGCCTGGCCTGCTATTGATTTGA

Protein sequence

MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20849	Spo20849	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20849.1	Spo20849.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20849.1.utr5p.1	Spo20849.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20849.1.CDS.5	Spo20849.1.CDS.5	CDS
Spo20849.1.CDS.4	Spo20849.1.CDS.4	CDS
Spo20849.1.CDS.3	Spo20849.1.CDS.3	CDS
Spo20849.1.CDS.2	Spo20849.1.CDS.2	CDS
Spo20849.1.CDS.1	Spo20849.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20849.1.utr3p.1	Spo20849.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20849.1.exon.5	Spo20849.1.exon.5	exon
Spo20849.1.exon.4	Spo20849.1.exon.4	exon
Spo20849.1.exon.3	Spo20849.1.exon.3	exon
Spo20849.1.exon.2	Spo20849.1.exon.2	exon
Spo20849.1.exon.1	Spo20849.1.exon.1	exon

Homology

[Close]

BLAST of Spo20849.1 vs. NCBI nr
Match: gi|902229644|gb|KNA21561.1| (hypothetical protein SOVF_042130 [Spinacia oleracea])

HSP 1 Score: 409.8 bits (1052), Expect = 2.900e-111
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


		  
Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR
Sbjct: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW
Sbjct: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA
Sbjct: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI
Sbjct: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 221

[Close]

BLAST of Spo20849.1 vs. NCBI nr
Match: gi|731373632|ref|XP_010666702.1| (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 275.0 bits (702), Expect = 1.100e-70
Identity = 153/221 (69.23%), Postives = 180/221 (81.45%), Query Frame = 1


		  
Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQ QCLSL S P  F     P ++ S+L+ R SHF+  SS+NFN LRL LN+      + 
Sbjct: 1   MQWQCLSLSSPPPTFL----PNSLSSTLRLRHSHFASHSSINFNQLRLPLNYHKSMPNHS 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           S+RSS VV  + S+I+SPRNLPWISAVSTAILMLVKGT I++SFLVPLFALQAPASVI+W
Sbjct: 61  SRRSSRVVCQAYSAILSPRNLPWISAVSTAILMLVKGTAINRSFLVPLFALQAPASVISW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAW+A LALL RLFF +PGELELPF+TLVLVIVAP +A+N+RGTQAG +ISL IA
Sbjct: 121 MQGEYGAWSAFLALLVRLFFFIPGELELPFVTLVLVIVAPHRALNVRGTQAGTVISLVIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           A+LAF HFT  GGLQKSF+Q SIVATLAIICIT+VP +LL+
Sbjct: 181 AYLAFLHFTKAGGLQKSFDQGSIVATLAIICITIVPCVLLV 217

[Close]

BLAST of Spo20849.1 vs. NCBI nr
Match: gi|590622923|ref|XP_007025182.1| (Cold regulated 314 thylakoid membrane 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 208.8 bits (530), Expect = 1.000e-50
Identity = 110/186 (59.14%), Postives = 142/186 (76.34%), Query Frame = 1


		  
Query: 36  SCPSSVNFNPLRLSLNHQNLTLKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLV 95
           S  SS++FNPL  S+ ++ +  K++  R+    +      +SPRNL WIS +S+A+L+L 
Sbjct: 45  SSTSSISFNPLTFSIKYKEIKKKSKGSRAVCYAAP-----LSPRNLQWISTISSAVLLLA 104

Query: 96  KGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVL 155
           KGT I K FLVPLFA QAPAS+I+WM+GEYG WAA LALL RLFF +PGELELPF+ L+L
Sbjct: 105 KGTAIQKQFLVPLFAFQAPASIISWMKGEYGLWAAFLALLVRLFFYIPGELELPFVALLL 164

Query: 156 VIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVV 215
           VIVAP QA+NLRGTQ GAI++L IAA+LAFQHF+  G LQK+ +Q S++AT+AI+CIT V
Sbjct: 165 VIVAPYQAINLRGTQQGAIVALVIAAYLAFQHFSRAGSLQKALDQGSVIATIAIVCITAV 224

Query: 216 PGLLLI 222
             L LI
Sbjct: 225 SFLFLI 225

[Close]

BLAST of Spo20849.1 vs. NCBI nr
Match: gi|641859367|gb|KDO78057.1| (hypothetical protein CISIN_1g027376mg [Citrus sinensis])

HSP 1 Score: 208.4 bits (529), Expect = 1.300e-50
Identity = 116/185 (62.70%), Postives = 142/185 (76.76%), Query Frame = 1


		  
Query: 39  SSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVK 98
           SS  FNPLRLS+NH+ + +  K +S+  S V     +S ++ RNL WIS +S+ +LML K
Sbjct: 43  SSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YASPLTARNLQWISTISSTVLMLAK 102

Query: 99  GTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLV 158
           GT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF+ L+LV
Sbjct: 103 GTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPFMALLLV 162

Query: 159 IVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVP 218
           IVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAIICIT + 
Sbjct: 163 IVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGNLRKAFEQGSVVATLAIICITALS 222

Query: 219 GLLLI 222
            L LI
Sbjct: 223 CLFLI 224

[Close]

BLAST of Spo20849.1 vs. NCBI nr
Match: gi|568826344|ref|XP_006467533.1| (PREDICTED: cold-regulated 413 inner membrane protein 1, chloroplastic isoform X1 [Citrus sinensis])

HSP 1 Score: 207.2 bits (526), Expect = 2.900e-50
Identity = 115/185 (62.16%), Postives = 142/185 (76.76%), Query Frame = 1


		  
Query: 39  SSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVK 98
           SS  FNPLRLS+NH+ + +  K +S+  S V     ++ ++ RNL WIS +S+ +LML K
Sbjct: 43  SSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YAAPLTARNLQWISTISSTVLMLAK 102

Query: 99  GTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLV 158
           GT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF+ L+LV
Sbjct: 103 GTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPFMALLLV 162

Query: 159 IVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVP 218
           IVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAIICIT + 
Sbjct: 163 IVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGNLRKAFEQGSVVATLAIICITALS 222

Query: 219 GLLLI 222
            L LI
Sbjct: 223 CLFLI 224

[Close]

BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPV5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_042130 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.100e-111
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


		  
Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR
Sbjct: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW
Sbjct: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA
Sbjct: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI
Sbjct: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 221

[Close]

BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4J6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003940 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.900e-71
Identity = 153/221 (69.23%), Postives = 180/221 (81.45%), Query Frame = 1


		  
Query: 1   MQSQCLSLCSSPRLFAAVAPPKAVFSSLQQRPSHFSCPSSVNFNPLRLSLNHQNLTLKNR 60
           MQ QCLSL S P  F     P ++ S+L+ R SHF+  SS+NFN LRL LN+      + 
Sbjct: 1   MQWQCLSLSSPPPTFL----PNSLSSTLRLRHSHFASHSSINFNQLRLPLNYHKSMPNHS 60

Query: 61  SKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPASVIAW 120
           S+RSS VV  + S+I+SPRNLPWISAVSTAILMLVKGT I++SFLVPLFALQAPASVI+W
Sbjct: 61  SRRSSRVVCQAYSAILSPRNLPWISAVSTAILMLVKGTAINRSFLVPLFALQAPASVISW 120

Query: 121 MQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIISLTIA 180
           MQGEYGAW+A LALL RLFF +PGELELPF+TLVLVIVAP +A+N+RGTQAG +ISL IA
Sbjct: 121 MQGEYGAWSAFLALLVRLFFFIPGELELPFVTLVLVIVAPHRALNVRGTQAGTVISLVIA 180

Query: 181 AFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           A+LAF HFT  GGLQKSF+Q SIVATLAIICIT+VP +LL+
Sbjct: 181 AYLAFLHFTKAGGLQKSFDQGSIVATLAIICITIVPCVLLV 217

[Close]

BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A061GL44_THECC (Cold regulated 314 thylakoid membrane 2 isoform 1 OS=Theobroma cacao GN=TCM_029560 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.900e-51
Identity = 110/186 (59.14%), Postives = 142/186 (76.34%), Query Frame = 1


		  
Query: 36  SCPSSVNFNPLRLSLNHQNLTLKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLV 95
           S  SS++FNPL  S+ ++ +  K++  R+    +      +SPRNL WIS +S+A+L+L 
Sbjct: 45  SSTSSISFNPLTFSIKYKEIKKKSKGSRAVCYAAP-----LSPRNLQWISTISSAVLLLA 104

Query: 96  KGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVL 155
           KGT I K FLVPLFA QAPAS+I+WM+GEYG WAA LALL RLFF +PGELELPF+ L+L
Sbjct: 105 KGTAIQKQFLVPLFAFQAPASIISWMKGEYGLWAAFLALLVRLFFYIPGELELPFVALLL 164

Query: 156 VIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVV 215
           VIVAP QA+NLRGTQ GAI++L IAA+LAFQHF+  G LQK+ +Q S++AT+AI+CIT V
Sbjct: 165 VIVAPYQAINLRGTQQGAIVALVIAAYLAFQHFSRAGSLQKALDQGSVIATIAIVCITAV 224

Query: 216 PGLLLI 222
             L LI
Sbjct: 225 SFLFLI 225

[Close]

BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: A0A067GRI6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027376mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.100e-51
Identity = 116/185 (62.70%), Postives = 142/185 (76.76%), Query Frame = 1


		  
Query: 39  SSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVK 98
           SS  FNPLRLS+NH+ + +  K +S+  S V     +S ++ RNL WIS +S+ +LML K
Sbjct: 43  SSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YASPLTARNLQWISTISSTVLMLAK 102

Query: 99  GTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLV 158
           GT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF+ L+LV
Sbjct: 103 GTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPFMALLLV 162

Query: 159 IVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVP 218
           IVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAIICIT + 
Sbjct: 163 IVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGNLRKAFEQGSVVATLAIICITALS 222

Query: 219 GLLLI 222
            L LI
Sbjct: 223 CLFLI 224

[Close]

BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Match: V4UKK5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016585mg PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.400e-50
Identity = 117/191 (61.26%), Postives = 142/191 (74.35%), Query Frame = 1


		  
Query: 33  SHFSCPSSVNFNPLRLSLNHQNLTL--KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTA 92
           S  S  SS  FNPLRLS+NH+ + +  K +S+  S V     ++ ++ RNL WIS VS+ 
Sbjct: 37  SFSSSSSSFAFNPLRLSVNHEEMKMVTKRKSRGFSAVC---YAAPLTARNLQWISTVSST 96

Query: 93  ILMLVKGTPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFSLPGELELPF 152
           +LML KGT + KSFLVPLFALQAPA VI+W++GEYG WAA LALL RLFF +PGELELPF
Sbjct: 97  VLMLAKGTAVPKSFLVPLFALQAPADVISWIKGEYGIWAAFLALLVRLFFFIPGELELPF 156

Query: 153 LTLVLVIVAPRQAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAII 212
           +  +LVIVAP Q + LRGTQ GAIISL IA +LAFQHF+  G L+K+FEQ S+VATLAII
Sbjct: 157 MAFLLVIVAPHQVLTLRGTQQGAIISLVIAGYLAFQHFSRAGSLRKAFEQGSVVATLAII 216

Query: 213 CITVVPGLLLI 222
           CIT V    LI
Sbjct: 217 CITAVSCFFLI 224

[Close]

BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRIM2_ARATH (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.900e-48
Identity = 120/225 (53.33%), Postives = 151/225 (67.11%), Query Frame = 1


		  
Query: 7   SLC-SSPRLFAAVAPPKAVFSSLQQRPSHFS----CPSSVNFNPLRLSLNHQNLTL---- 66
           SLC SS R+ +       +   L+ RPS+ S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLALKLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSAR 62

Query: 67  -KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
            + R KR S VV  + + ++S  NL WIS +S   LM  +GT IHKSF+VPLFALQAP  
Sbjct: 63  AEKRRKRGSSVVCYA-TPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMG 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           +++WM+GEYG WAA LALL RLFFS P ELELPF+ L+LVIVAP Q M++RG Q GAI+S
Sbjct: 123 IVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILS 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           L I+ FLAFQHF+  G LQK+F+Q S++AT+AII +TVV  L LI
Sbjct: 183 LAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRIM1_ARATH (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.800e-47
Identity = 118/225 (52.44%), Postives = 153/225 (68.00%), Query Frame = 1


		  
Query: 7   SLCSSPRLFAAVAPPKAVFS-SLQQRPSHFSC----PSSVNFNPLRLSLNHQNLT----- 66
           SLC S     ++   K   S  L+ RPS  S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLSLKLRSRPSDLSGLGRHTSPVCFNPLRLSGDRQRTATVSTR 62

Query: 67  LKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
           ++ R KR S VV    ++ IS  +L WIS +S   LML +GT IHKS +VPLFAL AP+S
Sbjct: 63  VEKRRKRGSSVVC--YAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFALHAPSS 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           ++AW++GEYG WAA LAL+ARLFF+ PGELELPF+ L+LVIVAP Q MN+RG Q GAII+
Sbjct: 123 IVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQEGAIIA 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           + I+ FLAFQHF+  G L+K++E+ S++AT+AII +TVV  LLL+
Sbjct: 183 IAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRPM4_ARATH (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.300e-10
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1


		  
Query: 81  LPWISAVSTAILMLVKGT----PIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W +++    L+++  T     +  + LVP      P+ +  +  G++G W A +A++ 
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 141 RLFF--SLPGELELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           RLFF    P  LE+P   +++V+V+P   A  LR +  GA+I L IA +L  +H   +GG
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 201 LQKSFEQVS-IVATLAIICITVVP 217
            + SF Q + I  T+ I+ + V P
Sbjct: 170 FKNSFTQKNGISNTIGIVALLVYP 193

[Close]

BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRPM2_ARATH (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.800e-10
Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 1


		  
Query: 98  TPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFS--LPGELELPFLTLVL 157
           T +  S L+P   L  P+ +  ++ G+ G W A +A++ RLFF    P  LE+P   ++L
Sbjct: 72  TKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPDWLEMPGSLILL 131

Query: 158 VIVAPR-QAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVA-TLAIICIT 217
           ++V+P   A ++RGT  G +ISL I  +L  +H   +GG + SF Q   V+ TL II + 
Sbjct: 132 LVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRGVSNTLGIILLL 191

Query: 218 VVPGLLLI 222
           V P   LI
Sbjct: 192 VYPVWALI 199

[Close]

BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Match: CRPM1_ARATH (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.800e-7
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 1


		  
Query: 81  LPWISAVSTAILMLVKGTP----IHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W+++++   L+++  T     +  S L+P      P+ +    +GE G W A +A++ 
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 141 RLFFSLPGE--LELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           +LFF       LELP   ++L +VAP   A   R +  G  I L I  +L  +H   +GG
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 201 LQKSFEQVS-IVATLAIICITVVPGLLLI 222
            + +F + + I  T+ IIC+ V P   LI
Sbjct: 168 FRNAFTKANGISNTVGIICLVVFPVWALI 196

[Close]

BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2)

HSP 1 Score: 191.8 bits (486), Expect = 4.400e-49
Identity = 120/225 (53.33%), Postives = 151/225 (67.11%), Query Frame = 1


		  
Query: 7   SLC-SSPRLFAAVAPPKAVFSSLQQRPSHFS----CPSSVNFNPLRLSLNHQNLTL---- 66
           SLC SS R+ +       +   L+ RPS+ S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLALKLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSAR 62

Query: 67  -KNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
            + R KR S VV  + + ++S  NL WIS +S   LM  +GT IHKSF+VPLFALQAP  
Sbjct: 63  AEKRRKRGSSVVCYA-TPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMG 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           +++WM+GEYG WAA LALL RLFFS P ELELPF+ L+LVIVAP Q M++RG Q GAI+S
Sbjct: 123 IVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILS 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           L I+ FLAFQHF+  G LQK+F+Q S++AT+AII +TVV  L LI
Sbjct: 183 LAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1)

HSP 1 Score: 190.7 bits (483), Expect = 9.900e-49
Identity = 118/225 (52.44%), Postives = 153/225 (68.00%), Query Frame = 1


		  
Query: 7   SLCSSPRLFAAVAPPKAVFS-SLQQRPSHFSC----PSSVNFNPLRLSLNHQNLT----- 66
           SLC S     ++   K   S  L+ RPS  S      S V FNPLRLS + Q        
Sbjct: 3   SLCLSSSRIVSLHHQKPFLSLKLRSRPSDLSGLGRHTSPVCFNPLRLSGDRQRTATVSTR 62

Query: 67  LKNRSKRSSMVVSNSLSSIISPRNLPWISAVSTAILMLVKGTPIHKSFLVPLFALQAPAS 126
           ++ R KR S VV    ++ IS  +L WIS +S   LML +GT IHKS +VPLFAL AP+S
Sbjct: 63  VEKRRKRGSSVVC--YAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFALHAPSS 122

Query: 127 VIAWMQGEYGAWAASLALLARLFFSLPGELELPFLTLVLVIVAPRQAMNLRGTQAGAIIS 186
           ++AW++GEYG WAA LAL+ARLFF+ PGELELPF+ L+LVIVAP Q MN+RG Q GAII+
Sbjct: 123 IVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQEGAIIA 182

Query: 187 LTIAAFLAFQHFTNTGGLQKSFEQVSIVATLAIICITVVPGLLLI 222
           + I+ FLAFQHF+  G L+K++E+ S++AT+AII +TVV  LLL+
Sbjct: 183 IAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family)

HSP 1 Score: 68.2 bits (165), Expect = 7.400e-12
Identity = 45/144 (31.25%), Postives = 77/144 (53.47%), Query Frame = 1


		  
Query: 81  LPWISAVSTAILMLVKGT----PIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W +++    L+++  T     +  + LVP      P+ +  +  G++G W A +A++ 
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 141 RLFF--SLPGELELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           RLFF    P  LE+P   +++V+V+P   A  LR +  GA+I L IA +L  +H   +GG
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 201 LQKSFEQVS-IVATLAIICITVVP 217
            + SF Q + I  T+ I+ + V P
Sbjct: 170 FKNSFTQKNGISNTIGIVALLVYP 193

[Close]

BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2)

HSP 1 Score: 66.6 bits (161), Expect = 2.200e-11
Identity = 47/128 (36.72%), Postives = 72/128 (56.25%), Query Frame = 1


		  
Query: 98  TPIHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLARLFFS--LPGELELPFLTLVL 157
           T +  S L+P   L  P+ +  ++ G+ G W A +A++ RLFF    P  LE+P   ++L
Sbjct: 72  TKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPDWLEMPGSLILL 131

Query: 158 VIVAPR-QAMNLRGTQAGAIISLTIAAFLAFQHFTNTGGLQKSFEQVSIVA-TLAIICIT 217
           ++V+P   A ++RGT  G +ISL I  +L  +H   +GG + SF Q   V+ TL II + 
Sbjct: 132 LVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRGVSNTLGIILLL 191

Query: 218 VVPGLLLI 222
           V P   LI
Sbjct: 192 VYPVWALI 199

[Close]

BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1)

HSP 1 Score: 57.8 bits (138), Expect = 1.000e-8
Identity = 45/149 (30.20%), Postives = 75/149 (50.34%), Query Frame = 1


		  
Query: 81  LPWISAVSTAILMLVKGTP----IHKSFLVPLFALQAPASVIAWMQGEYGAWAASLALLA 140
           L W+++++   L+++  T     +  S L+P      P+ +    +GE G W A +A++ 
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 141 RLFFSLPGE--LELPFLTLVLVIVAPRQ-AMNLRGTQAGAIISLTIAAFLAFQHFTNTGG 200
           +LFF       LELP   ++L +VAP   A   R +  G  I L I  +L  +H   +GG
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 201 LQKSFEQVS-IVATLAIICITVVPGLLLI 222
            + +F + + I  T+ IIC+ V P   LI
Sbjct: 168 FRNAFTKANGISNTVGIICLVVFPVWALI 196

The following BLAST results are available for this feature:

BLAST of Spo20849.1 vs. NCBI nr
BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
BLAST of Spo20849.1 vs. TAIR (Arabidopsis)

BLAST of Spo20849.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902229644\|gb\|KNA21561.1\|	2.9e-111	100.	hypothetical protein SOVF_0421...	[more]
gi\|731373632\|ref\|XP_010666702.1\|	1.1e-70	69.2	PREDICTED: cold-regulated 413 ...	[more]
gi\|590622923\|ref\|XP_007025182.1\|	1.0e-50	59.1	Cold regulated 314 thylakoid m...	[more]
gi\|641859367\|gb\|KDO78057.1\|	1.3e-50	62.7	hypothetical protein CISIN_1g0...	[more]
gi\|568826344\|ref\|XP_006467533.1\|	2.9e-50	62.1	PREDICTED: cold-regulated 413 ...	[more]

BLAST of Spo20849.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RPV5_SPIOL	2.1e-111	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B4J6_BETVU	7.9e-71	69.2	Uncharacterized protein OS=Bet...	[more]
A0A061GL44_THECC	6.9e-51	59.1	Cold regulated 314 thylakoid m...	[more]
A0A067GRI6_CITSI	9.1e-51	62.7	Uncharacterized protein OS=Cit...	[more]
V4UKK5_9ROSI	3.4e-50	61.2	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo20849.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CRIM2_ARATH	7.9e-48	53.3	Cold-regulated 413 inner membr...	[more]
CRIM1_ARATH	1.8e-47	52.4	Cold-regulated 413 inner membr...	[more]
CRPM4_ARATH	1.3e-10	31.2	Cold-regulated 413 plasma memb...	[more]
CRPM2_ARATH	3.8e-10	36.7	Cold-regulated 413 plasma memb...	[more]
CRPM1_ARATH	1.8e-7	30.2	Cold-regulated 413 plasma memb...	[more]

BLAST of Spo20849.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G29390.1	4.4e-49	53.3	cold regulated 314 thylakoid m...	[more]
AT1G29395.1	9.9e-49	52.4	COLD REGULATED 314 INNER MEMBR...	[more]
AT4G37220.1	7.4e-12	31.2	Cold acclimation protein WCOR4...	[more]
AT3G50830.1	2.2e-11	36.7	cold-regulated 413-plasma memb...	[more]
AT2G15970.1	1.0e-8	30.2	cold regulated 413 plasma memb...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 49..212 score: 2.3
None	No IPR available	PANTHER	PTHR33596	FAMILY NOT NAMED	coord: 28..221 score: 2.5
None	No IPR available	PANTHER	PTHR33596:SF3	COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 28..221 score: 2.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane