Spo20885.1 (mRNA)

Overview
NameSpo20885.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description3-ketoacyl-CoA thiolase 2, peroxisomal
LocationSpoScf_02658 : 29449 .. 38437 (+)
Sequence length1729
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGTGTGCGTGTGTGCTATGCGATGGGCGAGGGCGACGATGCAAGGCACGAGTGACGAGCAAGACGCGTGTGGGCATCGATGCTGCCGCGCCACAGCGCGCCTGGCTCGCCCAGCCAGTAAGCAGAACGCGCGAGCAGGGAGCGATCCTTCGCTCGCCGCGCGCTGGCCTGCGCAGCAACACGCGGCACAGTACAAGGCTGCGCGCAGCGTGGCCAGCTGTGGCGTGTCGCTGTGTGTGCTTTGTGCTACGATCAATCGAACGGGGCGCGAGCCTCGTAGCTTGATGGGGCTTGGGCGCAAGCCCAAGTGCCTCGTCTCGCGACGATTGGTACGTTTTGATTTTAATTTTAATTTTTAGTTCGGAAACGATTTTAATTAATTTTAAAATTCGAAATTTAAATTGTTTTCTTGGATTTTAATTTTGAATATTATAATTATTATAAATTTTATTTATACTAATTATTTGACTAAAATTAAATCTTGAATTAATTTAAATTCGTTTAATTCAACTGAAATAAATTAAATTAATGGATTCGATTATAAATTTATATGAGCTTTAAATTTTAATTAAATTTGTATGTTTCCGGCTAGACTAGAAATACATTTTTATGTTTAAAATTAGTAAAGCATATGAATTTATTGGTTTAAGTGGGATCATTTTTAGTCATAAACTCTTGATTAGGTCTACAAATCCCTTAAGGTTAAACAACTTGATTAGAATTAATAAGGACTGAATAATTGGTAGATTATTGGTGCCCTTAATTAATTGCTGCAAATATTTATGTGATGCATAACGTGTTTTACTAACCAGCTATGTGGGCCATTCATGATAATGAATGAGTGAATGGTATATATTGTATATGTATTGTTTTGCAGGTTATGAAGTGACTAGTATGGCCCAAATAGGATAGAAAATATGGTCTGCGTACCATTAATTTGAATGTAATTGGTCTAAAGTACCAAAATTGTTTTTCAATTCAAATATGGTCTGCGTACCATCAAATAGTTGTAATTAGTTTAATTATAGCTTATCCTATTTGAAGAAAATGGCGCCTCCCACGGAGATTTTCAAGACGGACTTTGAAGTTGAAGCTTCAAGATGAAGTCGGGCCATACTAGATCACATTTATCTTATGCATGTTTTAAGTTATTTATTGCTTTTAAATATGTCTTAAATATGCATGAGATCAAAGCTTGATTATGTTGCATGATTAAGGATTTTAGTTCACTTAAAATCTAACCAACATAGTAAGAGCCTTAAGTTCCAAACTTAAAAATTGAGTTAAAAGGTGCCATGCCAAAATAACACTTACTTGGATATCCTTTTTTCATCGATCTTAGTAATAGTTTTCCGCCATAGCGAGGTGTTACTTATCGATACTAAAGGGGTAAGGTACACAAATAATTGTGAGTACATGTTAGTTTTGGTGAAACTCAACGATATAAGTAAGGAGTCCTTTTATGTCGTGGCAAAATCGATAGGTTTACCTAATAAGTTCTTAGACGTACCTATCAACCAAGAGTAGTTTCTAGACTATTAGCAAAAGGCTTTTGCTTACCTAAAAGATTTTAGAATTAAGTCTAAATACATAATGTGCTTAATTCTTCAATGATTTTTAGGGTCTTGGAATCATTTTATTCACACCTGCCGGAACACATAACTCGAATAAAATGCTAATGACTTGTTTAAATTGCATGATTGCTTTAATTTTCAAGTTATTACTCATGATAAATGTTTAGACTTTGCATGCTTCAATGTATGTTTTAATTATTGTTTATAATTAAATATCTTGCACTGCAATAAATCCTTTTAGAAAGGTAACAGTAAATTTACTCGATTGGTTGTGAATCCAAGAACGATTCACGGAAATGAGAGAAAGTGAGCAATTTAAAATGTACGTTTCTTATAGAGACTTTTATGGTTGTTTTCGAATATCAAAGTCGAATGGCAAAGCGATTGGTGCTTGTGAATTCAAAATACAATGTAGTTTTGAGATCATAAAGCATTGAGTTTAAACGCTCAGCTTTACCAATGATTAGCAACCTAATATCTTTTTCCATTTAATTCTCGAATGAGTCTAGTCACAAGACATTCGAATAGGTCGATGCTTAGAGAACTTTAAAAGCTTCTGGTAAGATCATCTAGTTGAAACAGAATATTCAAACATAAAATCGTAAGAACTTTGTTGTAGTGACATTGGACATGTCTAAACAAAGTATAAAAGTCAACACTAAAGAATTTAATTCTTAAAGCTATTAGAAAGGGTACAAGAAATAGGAAGACAAGGAACAAATGAAAGGGATTTACGATTCCGTTTCTACCTATAAGTTTATGTTTAAAGAGAAGTAACCTAGCAATCAAACTTCATTGGTATCATATACCGCTTGAGGTTCTTACTTCAGTAATAACTCAAACAATGGAAGCTAGGCTACACTAATGGCCTACAAGTGGGAAATGAAGCATGGCAATGCTACATTAGTTGTAGGGTCATCTAGTTTGTTTTAAGTCCTTTCAAAGGCTGGAACTTAATGGCTATTTTGTTCCATAATCAGCATACTTAAATTTCTGCTTCAAACACAGAAAGACTCACATTCAGAAGAACAAAAACAATGCTTGTTTGTTTGTTTATTTGAATGAAATGGTCATTTACGGGTTGAGTCAATATGCTTGATTAAAACAAACAACTCTTTAACAATAAGAACTTTACTAGGTTCAAATCAATATCTTGATTTGAGTTCCACTAATCTTTGGCATTGTTGCTTAGACTATATCAACAAGTTAACATTCAAAATCTCTGTTTTGATGGAATTTTGAAAGTTGATTGATTTCTAGATCATTCAAGACGAGCTAGTCTTACTTGTTGAAAGTAACAAAAGATATGAACTATTGTTAGAACGCCTAGACCATAGAGTTCAAAGCTAAAGAAAGATTTTATGACTTTATTATTTCACATGGTTTTGAGTGAATATGGACTTATTTACTCAATGTGATATAAGTTTGAATCTGTTTGGCAAGTTCAAAGATTCAAAAGTATAAAATCCACTTGGCAAGAAATCATAAAGATCTAGATTAGATCATGTCGATGATTACTTTAAGACCAAAAATGATCATCAATGATTGTGTGTTGCAATTTCACGATCTAGCTCCATAAGATATGGCATATCTACGTTGGAATGATCGAAGTCAATTAGTATTTGATTCGATCAATGATGAATCATTAACTTTTCCTATAATTTCTAAAACAAAATGCTCAACTACCACCAAACTAAACCAAATTCGTCAAAGCTATTGAAAAGTAATTTCAGAATATCTTTTCATAATATATATCTAGAGAGTTGCTAAACTCAGTGGGAGCTTAGTGTTTGTCATTCGACAAACTAAGGCCCAAGTATAGATATATGTTTCATTGTGATGTATTCAAATGAGACACAAGGGTATTGTTTCTACCACGAATTTTTGAGAACATAATGTTTGTTTGCTCAAAATAATGTCCTTTTGGAGATTCGTTTCCAAAATGACAAGTGGGAGAAAATAGACCTCGAAAGTCTTCGAGGCGAACAACAAATATAAACGGACATTCCGGAGGCTTTTCGAAGTGCTTCAGAAAATCTGAACTTATTCTTTGAGGACTTTAGAAGTGGCTTTAAAGAATAGACATCTCTTAGAAGACTTTACAAGTGCTTCAAGGAGAACAGAATATTCAAAGGACTTTCAAGTGGCTATTGATATTCTATTTTTTTGATGTTCTATACCCAAGTAGGCATAGAGTTCAAGTCATTGAAACTATAAGATTCTTCTATTAGATAGTGAAGAATCATGGAGTTCAGGTCACTGAAGCTATGCGATTCTTCTATTAGCACTACTACAAAATAGGGAATAGAAAACACTGAATAGAGGACGGTTAAGTTTGATAAGTGTTGTATAGGTGTATAGAGAACGCATTTCTCTCATAACAGTTGTGTGAAAAAAAGAATAGAGGACAGTTACCTTACCTAACCGTCTTATATTATTTACCATAATAATAAAAAAATATAAAATATAAAATAATTAATAAAATATAAAACTGTTCTCAAGATAACCATTTAACCTTAATTTAACCAAATCAAATATTTTTTAAAAAATAAAATACCAAAGCAATTAAAGTTTTATGAGTTAGGCGGCAGAACATGAATTCCTAAAACTTTTAACTGGGTTAGGCGCGCATAAAAATTCATCAGAACCCTCAGAAAACCCCCCAACTCTGCTCGCAAGAAAACCGAAACCTCTTCACCGCCGCTCTTCACTGCCGCTTCTCACTCTGCACCGCCTCTCCCTTGCGCCTCTTTCCGGCCGCCTCCCAACCTCCGGTAAAACTCGCAGAAAGCCACTCCAAACTCTACTCGCAAGAAAACCCGCAAAACTCACTGCTGCTCCTCACTCTGCGCCGCCGCTCCCTTGTACCTCTTTCCGGCCGCATCTCAACCTCCCGTAAAACCCGGTTGCCCCACCGCTGCAATCAATTCCACGGTTAGTGTGCTTAATTATGTTTTTCATACGATTTTATTCAACCTATAACCTAGGGATTATGAATATTTGTAATTATCTAATTGTAATATATAATTAAAGAATTCAGTTTGTTAATTGCTGAACGCCTGAACCTCGATGGAGCGAATGTAAACGTTAATGGAGGAGCTATAGCGCTTGGATATCCTTTCGGAGCTACATGTATGCAATTTTGCTTCTTGATAAACACTTTTGTGGGTGAGTTAGGCCTGTCCTCTTCAATTTATAACAAATATACTCCCATCCAGTAAAAATCTGTTTTAATATGTTCAAAATCGGTTTTAATTAGTAAAATCTGGTTTTATCAATCAGCAAAAATCAATTACAATTTGTAAATTTTGGGTTTTATCAATTTGCCGAAATCAGACTTTATTCAGTGAAAATCACTTTTTTTCCAGTAAAAATAAGGATTACAAGAACAAGGCCTTAATGATTAGTATATTGATAGTTGTTTCTGTTTGAATGGTTATTTAGATCCTACTTCATTCTTTTCTCAGGTGCCCTGTGTGAAATTAAACATCGAGGAAGAGATTGCCGATTTGGAGTCGTTTCCATGTTTATAGGTCTCTCTCTCCCTGCCTTCTGAACTCCTCTCTTTCATCATATAATGTGTGCAATTAAACGGAATTGTGAACCCTTAAAATCTGTTAACTGGAATCTGTAAAGCTGAAGCTACTAAGTTTCAAATATTATCCCATAATATATAACTGATATATTTTTTTATAACATTCTCTCATAAACTGTGTACTGAACACCGTAGTATAGAAATGTTAATTTACAGACTTACCAATGTATACCAAATGCACTATTGAAATTGGTAAGTACCCACACAGCTATCTTACCAGGTGCCTCTCCCTGGACAGGGGGGACTACTTTAAAGATCTGTACTACCAGTTCTGAACTTGCAGGAAGGGGTAAGAGTGCTTCAATTGTTTTTAAAAGAGGTGATCGTGTAGGCGAATTAACTACCTAACACCTGTTAACTGGAATCTGTAAAGCTGAAGCTTCGGTTGTAATGAAGGTTTCCAACTAAGAGGGTGAAGGAGGCACGTGAGAGGATGAAATTGCTGGTTGTTTTTAATATTTATAAATAAAACATGTGTTTAGTTATAATTGAGTAAGTTTCAGGCTGTAACCCAATTTAGTTGGTTCTGTGGCATGCGTAACTGAAATTGTTATTCATGGGTATAATAGCTATTTGAATCCTGCAATCCTATGTAAATGATTCTCTGTCTAAGAAGTCTGGAGGCTGTGTTTTTGCGCTTCAAGATGAACAGCTGCAGGCCACCCAACAGTACACGCAAAGCACCAGAACCACAATCTTGATGGTCGTTCAATCCACCGTCCTGTTTAGCTAGCGGTACCTCTTTCTAAACATTTTAACCTTCTGAAAAAAGGAATGAAAGCGTCATTAGTAACTCCTCTGAGGGATCCATATTTCGCAAGTAGATGAGGAAACATGATCAGATGACTGCTGCATCTTAGTGCGTCTTAGATGAATGGAGATACTTGGTTTGTTCCGCTGAGTCATAGTTCTCTTTTGTCATATCATAGTTGATGGTGCTTTGTGATGCTGCTACTGAAATTATTTATAATAAATAAATTTTTATGTGTTAGACCTAGCAGATGATCACATCATCTACAAGTTAGATTTTACAGTGTTCGGTCAATTGCTTGTGCAGGTTTCTCTACTTTTTGCAGAAAGGTACCGGCTGTCTGAACTTTCTCTTGGAACTGATTCTCAATGTATAATATTCATTTTACAGCTACATCAAAATGGTTTACTCGGAGGAGATGACATAACAGACCGCTTCTTCCGGGTTCTTTGGTGAATGTTATTTCCATTTTAGAGTTTTGGTTTAATATTTATTTATTATTGTATTTAGTACCATATGCATAATTGATCTTGTGTTCCAGGAAATCTTTGTGTCACATTTTGGTGAGGTGATGCAATACACTCCACCCCAAGTGCAGTCCTTCCTCGCCATTGATATTTACGCTAAATCAGTATATTCAATCTTGAAGATATTTTTGCTTTTCCCTTGCGATTTTCTCTTACTGTATTGCACTGTCTTTAACTTCAAATCTTGTTGTTTTTGTAGCATTCTCCAGTGGATCAAAGATCAAGCAAACTCTTTCTCTTACCAAAGGTTGGATTCTAAACTTTGGTTGTTAGACTTTGGATCGTTAGAATCTGTGCATGAAGGTGTTAATTTCCAAGTACATCTTGGTTGCCACTGTAATCAGCTCCCCTCCGCTGCGAGCATTTACTGCTCACTCTATTGATACTTTTTCCTGTTTTGGTTAACGGTGGTTTGTTTTTCCAGGTTTTGTCAGCTTTTGCAAATGCATTCCATGCCTTGCAGCCTCTTAAAAGTACCTGCTTTCAGGTTAGAAATGTTTGATAGTTTGGTTATTTCGAAACCTTGGCTGTCTTTATGCCACTTTGTTACTGCAGTCTTTGATCTTGTGAGCATCAGAATATCAGATATACCGATATGGTGAATCTAAGTATAAAATCTTTTTCATTCTCGGTGATTTAAGGTAATCTGTGGCATTTTAATCATCAGTTCTTTTCTTGACATTAGCATTCTAAGGTTGGCTGTGTAAACCAATTATGTACCTGGTTTCAGTCAGTAATTTGGTCTTTAAGGTTATATTACTTGATTTATTTAGAGCATGCTTGGATGCCTGTTGTGATGTTGTTATCATTTACCAGACACTGATCAATGAAAGTTGTCCAGTCTTGAATGTTGATTGTCTTTAAACTAAGAACTACTTTGTTTGATGTCATGGGGTAGTTTTGAAATGTGAAACCAATATTTTTTCTGAATATTCTGGCGGTAAATATTTATCATCTCGGTTTGGCTTTATCAAAGGCTTTGTCCTCTCTCTGTCTCTCTTTACTTTTTCCTTTTTTTAAGGACAATTACAGTTTGCAAATGACATTCAGGGGTATATTTAGTCACAAATGAAGATAATATTTTACAGTAAGGTCAGTAACAGGCATGAGTTAAAAAGGTTGGTTCAGTAGTCTGATATTGAATTAGACATTCGGGAACCTCTCTGGATTTTGTTTTTGTTTTTTTGTCTAAATAGAAATTACTTTTAAAAAGAATGGAGCAATTAGTAGTACTCTTAATGCATACTGATCCTTGTTATAAACTTTTGTTGTGGTTTTTCTAGGTTAGACTTGTTATTGTCTCCTTGGCCCCTCTATCTATCTTTCCACCCCTGGTGCGATTGGGATAATAAAAGGGTTGGGTCTGAGCTCTGAGGGGACACCCTTACCTTGTTTATATTAGCCTTTTCAACCTTTCTTCTTCTCATTCACGGCATAATGTGAAGGCCAGTTTCGTTGCATTATGGCTCAAATTATCCAGCTCAAAGCTTTTATTAAAGTCCGGCATTTTATTCTGCAGAAGATTCTAAAGATAGAAGGAAGGATCTAGGGCACCGCCTCACCGAAGCCTTAAAGCTTGTATTGCTGATTGGTATATGCCCTATTTAGTTGCAGAAGAGTTACATTGTAATTTTCTGTTGTTTTTTTTGTTCATTTTCGTGATTGAAGGATGCGCATCATGCTCTCGAGTGTAGGATTTAAGCGTAGAGTATTTATTTCGACAACTGCAATGAAAACTCCAAAGTAACTAGTTTAATTTTAGTTTGCCTTCTGCCAGGTTATGGGAAAAATTCATGCAGTCCTCTCTGATGGACCAGTACCGTACGTAGTGAAAAATGTTGAGGTCATTTTGACTGTATTACTGATTTTTAGTTATTCAGTTAGGTTAATAAAACACCCGTTGTTTAGGCATTTAGTTGTGCAAACTTAATGGGTTGAGTATGATTTAAACTTCTTGGGGTTTCGAAGTAGCAGGGCTAGTTTCTTTTCTAGTCTAAGAATTCAACTATGATGTGTATTAGTATTTGTGTACTCCTGCAGCTGTAGCACTAGCATTAAACTCCTTTGTCATGATACTCACACAGGTAATAGAGAGGAGAGATGCGCTGAATGAAACCACAGAAGCTCAGCTCCTCAAGAAGATCGAGACCACTGAACACACACTGGCAGCATCAACTGCGGCGCTTGAGCAAGAAGAATTTCAGGGAATATATTCCGGAGTGCAAGCTGAAGTGCTGCTGCTCCTACTAATGTGCAGCTGGCTCATTCAAGAACACCACGAGCTGATTTTCTTTGCTTGATTACTTAACCTGTACGAAAAAAGGGAAGGGTATTGCCTGATTTATTTTTTTTCCCTTTCCATTTTGTAAACACATTAGAGTAACTTGTAAAATGTACGTTATTTTTTAATATATTTAATGCTTGTTTATGCAAAAAAATACGTATATATATTTTTTTAAAAAATGGTGGAATAGAGGACGCTTATCTAAGAAAACCGTCCTCTATGTCTATGTAAAAAAAGGAAGAATAGAGTACGCC

mRNA sequence

ATGCGTGTGTGCGTGTGTGCTATGCGATGGGCGAGGGCGACGATGCAAGGCACGAGTGACGAGCAAGACGCGTGTGGGCATCGATGCTGCCGCGCCACAGCGCGCCTGGCTCGCCCAGCCAGTAAGCAGAACGCGCGAGCAGGGAGCGATCCTTCGCTCGCCGCGCGCTGGCCTGCGCAGCAACACGCGGCACAGTACAAGGCTGCGCGCAGCGTGGCCAGCTGTGGCGTGTCGCTGTGTGTGCTTTGTGCTACGATCAATCGAACGGGGCGCGAGCCTCGTAGCTTGATGGGGCTTGGGCGCAAGCCCAAGTGCCTCGTCTCGCGACGATTGGCGCGCATAAAAATTCATCAGAACCCTCAGAAAACCCCCCAACTCTGCTCGCAAGAAAACCGAAACCTCTTCACCGCCGCTCTTCACTGCCGCTTCTCACTCTGCACCGCCTCTCCCTTGCGCCTCTTTCCGGCCGCCTCCCAACCTCCGGTAAAACTCGCAGAAAGCCACTCCAAACTCTACTCGCAAGAAAACCCGCAAAACTCACTGCTGCTCCTCACTCTGCGCCGCCGCTCCCTTGTACCTCTTTCCGGCCGCATCTCAACCTCCCGTAAAACCCGGTTGCCCCACCGCTGCAATCAATTCCACGAATTCAGTTTGTTAATTGCTGAACGCCTGAACCTCGATGGAGCGAATGTAAACGTTAATGGAGGAGCTATAGCGCTTGGATATCCTTTCGGAGCTACATGTATGCAATTTTGCTTCTTGATAAACACTTTTGTGGGTGCCCTGTGTGAAATTAAACATCGAGGAAGAGATTGCCGATTTGGAGTCGTTTCCATGTTTATAGAAAGGTACCGGCTGTCTGAACTTTCTCTTGGAACTGATTCTCAATGTATAATATTCATTTTACAGCTACATCAAAATGGTTTACTCGGAGGAGATGACATAACAGACCGCTTCTTCCGGGTTCTTTGTACCATATGCATAATTGATCTTGTGTTCCAGGAAATCTTTGTGTCACATTTTGGTGAGGTGATGCAATACACTCCACCCCAAGTGCAGTCCTTCCTCGCCATTGATATTTACGCTAAATCACATTCTCCAGTGGATCAAAGATCAAGCAAACTCTTTCTCTTACCAAAGGTTTTGTCAGCTTTTGCAAATGCATTCCATGCCTTGCAGCCTCTTAAAAGTACCTGCTTTCAGAAGATTCTAAAGATAGAAGGAAGGATCTAGGGCACCGCCTCACCGAAGCCTTAAAGCTTGTATTGCTGATTGGTAATAGAGAGGAGAGATGCGCTGAATGAAACCACAGAAGCTCAGCTCCTCAAGAAGATCGAGACCACTGAACACACACTGGCAGCATCAACTGCGGCGCTTGAGCAAGAAGAATTTCAGGGAATATATTCCGGAGTGCAAGCTGAAGTGCTGCTGCTCCTACTAATGTGCAGCTGGCTCATTCAAGAACACCACGAGCTGATTTTCTTTGCTTGATTACTTAACCTGTACGAAAAAAGGGAAGGGTATTGCCTGATTTATTTTTTTTCCCTTTCCATTTTGTAAACACATTAGAGTAACTTGTAAAATGTACGTTATTTTTTAATATATTTAATGCTTGTTTATGCAAAAAAATACGTATATATATTTTTTTAAAAAATGGTGGAATAGAGGACGCTTATCTAAGAAAACCGTCCTCTATGTCTATGTAAAAAAAGGAAGAATAGAGTACGCC

Coding sequence (CDS)

ATGCGTGTGTGCGTGTGTGCTATGCGATGGGCGAGGGCGACGATGCAAGGCACGAGTGACGAGCAAGACGCGTGTGGGCATCGATGCTGCCGCGCCACAGCGCGCCTGGCTCGCCCAGCCAGTAAGCAGAACGCGCGAGCAGGGAGCGATCCTTCGCTCGCCGCGCGCTGGCCTGCGCAGCAACACGCGGCACAGTACAAGGCTGCGCGCAGCGTGGCCAGCTGTGGCGTGTCGCTGTGTGTGCTTTGTGCTACGATCAATCGAACGGGGCGCGAGCCTCGTAGCTTGATGGGGCTTGGGCGCAAGCCCAAGTGCCTCGTCTCGCGACGATTGGCGCGCATAAAAATTCATCAGAACCCTCAGAAAACCCCCCAACTCTGCTCGCAAGAAAACCGAAACCTCTTCACCGCCGCTCTTCACTGCCGCTTCTCACTCTGCACCGCCTCTCCCTTGCGCCTCTTTCCGGCCGCCTCCCAACCTCCGGTAAAACTCGCAGAAAGCCACTCCAAACTCTACTCGCAAGAAAACCCGCAAAACTCACTGCTGCTCCTCACTCTGCGCCGCCGCTCCCTTGTACCTCTTTCCGGCCGCATCTCAACCTCCCGTAAAACCCGGTTGCCCCACCGCTGCAATCAATTCCACGAATTCAGTTTGTTAATTGCTGAACGCCTGAACCTCGATGGAGCGAATGTAAACGTTAATGGAGGAGCTATAGCGCTTGGATATCCTTTCGGAGCTACATGTATGCAATTTTGCTTCTTGATAAACACTTTTGTGGGTGCCCTGTGTGAAATTAAACATCGAGGAAGAGATTGCCGATTTGGAGTCGTTTCCATGTTTATAGAAAGGTACCGGCTGTCTGAACTTTCTCTTGGAACTGATTCTCAATGTATAATATTCATTTTACAGCTACATCAAAATGGTTTACTCGGAGGAGATGACATAACAGACCGCTTCTTCCGGGTTCTTTGTACCATATGCATAATTGATCTTGTGTTCCAGGAAATCTTTGTGTCACATTTTGGTGAGGTGATGCAATACACTCCACCCCAAGTGCAGTCCTTCCTCGCCATTGATATTTACGCTAAATCACATTCTCCAGTGGATCAAAGATCAAGCAAACTCTTTCTCTTACCAAAGGTTTTGTCAGCTTTTGCAAATGCATTCCATGCCTTGCAGCCTCTTAAAAGTACCTGCTTTCAGAAGATTCTAAAGATAGAAGGAAGGATCTAG

Protein sequence

MRVCVCAMRWARATMQGTSDEQDACGHRCCRATARLARPASKQNARAGSDPSLAARWPAQQHAAQYKAARSVASCGVSLCVLCATINRTGREPRSLMGLGRKPKCLVSRRLARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKLYSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFVSHFGEVMQYTPPQVQSFLAIDIYAKSHSPVDQRSSKLFLLPKVLSAFANAFHALQPLKSTCFQKILKIEGRI
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo20885Spo20885gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo20885.1Spo20885.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20885.1.exon.1Spo20885.1.exon.1exon
Spo20885.1.exon.2Spo20885.1.exon.2exon
Spo20885.1.exon.3Spo20885.1.exon.3exon
Spo20885.1.exon.4Spo20885.1.exon.4exon
Spo20885.1.exon.5Spo20885.1.exon.5exon
Spo20885.1.exon.6Spo20885.1.exon.6exon
Spo20885.1.exon.7Spo20885.1.exon.7exon
Spo20885.1.exon.8Spo20885.1.exon.8exon
Spo20885.1.exon.9Spo20885.1.exon.9exon
Spo20885.1.exon.10Spo20885.1.exon.10exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20885.1.CDS.1Spo20885.1.CDS.1CDS
Spo20885.1.CDS.2Spo20885.1.CDS.2CDS
Spo20885.1.CDS.3Spo20885.1.CDS.3CDS
Spo20885.1.CDS.4Spo20885.1.CDS.4CDS
Spo20885.1.CDS.5Spo20885.1.CDS.5CDS
Spo20885.1.CDS.6Spo20885.1.CDS.6CDS
Spo20885.1.CDS.7Spo20885.1.CDS.7CDS
Spo20885.1.CDS.8Spo20885.1.CDS.8CDS
Spo20885.1.CDS.9Spo20885.1.CDS.9CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo20885.1.utr3p.1Spo20885.1.utr3p.1three_prime_UTR
Spo20885.1.utr3p.2Spo20885.1.utr3p.2three_prime_UTR


Homology
[Close]
BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902212284|gb|KNA16929.1| (hypothetical protein SOVF_084780 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 345.9 bits (886), Expect = 9.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170
[Close]
BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902212285|gb|KNA16930.1| (hypothetical protein SOVF_084780 isoform C, partial [Spinacia oleracea])

HSP 1 Score: 345.9 bits (886), Expect = 9.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170
[Close]
BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902232712|gb|KNA22768.1| (hypothetical protein SOVF_031520 isoform B [Spinacia oleracea])

HSP 1 Score: 134.0 bits (336), Expect = 5.800e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1 

		  

Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1857 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1916

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1917 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1957
[Close]
BLAST of Spo20885.1 vs. NCBI nr
Match: gi|902232711|gb|KNA22767.1| (hypothetical protein SOVF_031520 isoform A [Spinacia oleracea])

HSP 1 Score: 134.0 bits (336), Expect = 5.800e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1 

		  

Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1856 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1915

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1916 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1956
[Close]
BLAST of Spo20885.1 vs. NCBI nr
Match: gi|731361028|ref|XP_010692136.1| (PREDICTED: CCR4-NOT transcription complex subunit 1 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 117.5 bits (293), Expect = 5.600e-23
Identity = 81/185 (43.78%), Postives = 92/185 (49.73%), Query Frame = 1 

		  

Query: 276  VVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQE 335
            V  +F E Y++ E+S G D+ C+ F+LQLHQ+GLL GDDITDRFFRVL           E
Sbjct: 1860 VSPLFAEWYQICEVSSGFDNACMRFVLQLHQSGLLRGDDITDRFFRVLL----------E 1919

Query: 336  IFVSHFGEVMQYTPPQ-----VQSFLAIDIYAK------SHSPVDQRSSKLFLLPK---- 395
            I VSHFGEV+Q +P Q       SFLAID YAK       H PVDQ +SKLFLLPK    
Sbjct: 1920 ISVSHFGEVVQQSPKQPPHLIQTSFLAIDSYAKLVYSILKHCPVDQGTSKLFLLPKILVV 1979

Query: 396  ---------------------------------------------VLSAFANAFHALQPL 401
                                                         VLSAFANAFHALQPL
Sbjct: 1980 TVRSIQKDADEKKEEFNPRPYYRLFINWLLDFGSLDPVHDGINFQVLSAFANAFHALQPL 2034
[Close]
BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD55_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_084780 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170
[Close]
BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBR8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_084780 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.700e-92
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 112 ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 171
           ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL
Sbjct: 1   ARIKIHQNPQKTPQLCSQENRNLFTAALHCRFSLCTASPLRLFPAASQPPVKLAESHSKL 60

Query: 172 YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 231
           YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV
Sbjct: 61  YSQENPQNSLLLLTLRRRSLVPLSGRISTSRKTRLPHRCNQFHEFSLLIAERLNLDGANV 120

Query: 232 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI
Sbjct: 121 NVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 170
[Close]
BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTI4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031520 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.000e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1 

		  

Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1857 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1916

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1917 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1957
[Close]
BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RVB2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031520 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.000e-28
Identity = 75/111 (67.57%), Postives = 79/111 (71.17%), Query Frame = 1 

		  

Query: 279  MFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQEIFV 338
            +F E YRLSEL LGTD+QCI FILQLHQNGLL GDDITDRFFRVL           EI V
Sbjct: 1856 LFAEWYRLSELPLGTDAQCIRFILQLHQNGLLRGDDITDRFFRVLL----------EISV 1915

Query: 339  SHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
            SHFGEVMQ TP    SFLAIDIYAK       H PVDQ S KLFLLPK+L+
Sbjct: 1916 SHFGEVMQSTPQVQSSFLAIDIYAKLVYSILKHCPVDQGSGKLFLLPKILT 1956
[Close]
BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGB8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g018420 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.900e-23
Identity = 81/185 (43.78%), Postives = 92/185 (49.73%), Query Frame = 1 

		  

Query: 276  VVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQE 335
            V  +F E Y++ E+S G D+ C+ F+LQLHQ+GLL GDDITDRFFRVL           E
Sbjct: 1859 VSPLFAEWYQICEVSSGFDNACMRFVLQLHQSGLLRGDDITDRFFRVLL----------E 1918

Query: 336  IFVSHFGEVMQYTPPQ-----VQSFLAIDIYAK------SHSPVDQRSSKLFLLPK---- 395
            I VSHFGEV+Q +P Q       SFLAID YAK       H PVDQ +SKLFLLPK    
Sbjct: 1919 ISVSHFGEVVQQSPKQPPHLIQTSFLAIDSYAKLVYSILKHCPVDQGTSKLFLLPKILVV 1978

Query: 396  ---------------------------------------------VLSAFANAFHALQPL 401
                                                         VLSAFANAFHALQPL
Sbjct: 1979 TVRSIQKDADEKKEEFNPRPYYRLFINWLLDFGSLDPVHDGINFQVLSAFANAFHALQPL 2033
[Close]
BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 6.600e-8
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1 

		  

Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 366 KLGLDAEKINVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 418
[Close]
BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.100e-7
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1 

		  

Query: 222 ERLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 281
           ++L LD   VNVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGV+SM I
Sbjct: 374 KKLELDMEKVNVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVISMCI 427
[Close]
BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 2.500e-7
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1 

		  

Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGA+A+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 374 KLGLDPEKINVNGGAMAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 426
[Close]
BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT1G02080.1 (transcription regulators)

HSP 1 Score: 72.8 bits (177), Expect = 5.600e-13
Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 1 

		  

Query: 276  VVSMFIERYRLSELSLGTDSQCIIFILQLHQNGLLGGDDITDRFFRVLCTICIIDLVFQE 335
            V ++F   Y++ EL    ++ C  ++L LHQ GLL GDD T+ FFR+L  + +   +  E
Sbjct: 1907 VSTLFKNWYQICELPGANETACSQYVLHLHQTGLLKGDDTTESFFRILLELSVAHCISSE 1966

Query: 336  IFVSHFGEVMQYTPPQVQSFLAIDIYAK------SHSPVDQRSSKLFLLPKVLS 384
               S  G V     PQ  SFL ID+YAK       + P  + SS+LFLL ++++
Sbjct: 1967 DINS--GAVQSPQQPQSPSFLIIDMYAKLVFSILKYFPEQESSSRLFLLSEIMA 2018
[Close]
BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT1G04710.1 (peroxisomal 3-ketoacyl-CoA thiolase 4)

HSP 1 Score: 60.1 bits (144), Expect = 3.700e-9
Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 1 

		  

Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 366 KLGLDAEKINVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 418
[Close]
BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT5G48880.2 (peroxisomal 3-keto-acyl-CoA thiolase 2)

HSP 1 Score: 59.3 bits (142), Expect = 6.400e-9
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 1 

		  

Query: 222 ERLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 281
           ++L LD   VNVNGGAIA+G+P GAT  +    +      L E+K RG+DCRFGV+SM I
Sbjct: 374 KKLELDMEKVNVNGGAIAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVISMCI 427
[Close]
BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Match: AT2G33150.1 (peroxisomal 3-ketoacyl-CoA thiolase 3)

HSP 1 Score: 58.2 bits (139), Expect = 1.400e-8
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 1 

		  

Query: 223 RLNLDGANVNVNGGAIALGYPFGATCMQFCFLINTFVGALCEIKHRGRDCRFGVVSMFI 282
           +L LD   +NVNGGA+A+G+P GAT  +    +      L E+K RG+DCRFGVVSM I
Sbjct: 374 KLGLDPEKINVNGGAMAIGHPLGATGARCVATL------LHEMKRRGKDCRFGVVSMCI 426
The following BLAST results are available for this feature:
BLAST of Spo20885.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902212284|gb|KNA16929.1|9.7e-92100.hypothetical protein SOVF_0847... [more]
gi|902212285|gb|KNA16930.1|9.7e-92100.hypothetical protein SOVF_0847... [more]
gi|902232712|gb|KNA22768.1|5.8e-2867.5hypothetical protein SOVF_0315... [more]
gi|902232711|gb|KNA22767.1|5.8e-2867.5hypothetical protein SOVF_0315... [more]
gi|731361028|ref|XP_010692136.1|5.6e-2343.7PREDICTED: CCR4-NOT transcript... [more]
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BLAST of Spo20885.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RD55_SPIOL6.7e-92100.Uncharacterized protein (Fragm... [more]
A0A0K9RBR8_SPIOL6.7e-92100.Uncharacterized protein (Fragm... [more]
A0A0K9RTI4_SPIOL4.0e-2867.5Uncharacterized protein OS=Spi... [more]
A0A0K9RVB2_SPIOL4.0e-2867.5Uncharacterized protein OS=Spi... [more]
A0A0J8BGB8_BETVU3.9e-2343.7Uncharacterized protein OS=Bet... [more]
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BLAST of Spo20885.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
THIK1_ARATH6.6e-852.53-ketoacyl-CoA thiolase 1, per... [more]
THIK5_ARATH1.1e-751.63-ketoacyl-CoA thiolase 5, per... [more]
THIK2_ARATH2.5e-750.83-ketoacyl-CoA thiolase 2, per... [more]
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BLAST of Spo20885.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G02080.15.6e-1336.8transcription regulators[more]
AT1G04710.13.7e-952.5peroxisomal 3-ketoacyl-CoA thi... [more]
AT5G48880.26.4e-951.6peroxisomal 3-keto-acyl-CoA th... [more]
AT2G33150.11.4e-850.8peroxisomal 3-ketoacyl-CoA thi... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 213..251
score: 3.
IPR016039Thiolase-likeunknownSSF53901Thiolase-likecoord: 214..252
score: 1.3
IPR020617Thiolase, C-terminalPFAMPF02803Thiolase_Ccoord: 213..252
score: 3.
NoneNo IPR availablePANTHERPTHR13162CCR4-NOT TRANSCRIPTION COMPLEXcoord: 279..390
score: 1.1
NoneNo IPR availablePANTHERPTHR13162:SF8CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1coord: 279..390
score: 1.1

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups