Spo20935.1 (mRNA) | SpinachBase

Overview


Name	Spo20935.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein L31
Location	chr4 : 17123074 .. 17126390 (+)
Sequence length	1107

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAGATAGAGAAATTAATAGATCTAGCTCTATATATATGGATTTCAAGGATAGGCGCTGGTTTGTGTTGAAGGGGTGTAAAAGGAATCTATTTATAGAGTGATGTTGAAACATTGTATTAATTGTTGCGATGTAACTCTCAAATTTATCTACATATTCCTTTAATTTGTATATAAACAACATTTGACAAGAAAATGGCTTTAGAAGCTTATTTACTAAGTATAGCATGATTTGTCTTGTTGGACTGGCTGTGCCATGCCTTGTCGTGTTTCTTCCAAAAAATACAGTCTATGCCCGACCCATGACTTTGTGCCCGTGTCTAAGCGTATTTTTTCGTGTCTTGTCAGCCCGACCCATCCCATCCCATCCCACAACCATATTTTTTTTCTTGTCGTGCCAGTCGGACTATACGAGTAACCACTAACCAGCTAGTTGACCCGACACAACAACGACTCACCCAACCCCGACCCGACCCCAACTGAAAACCGCATTTGACAACTTGAGTTTATGTTTAACAAACTTTTTACAGCTGAACAGAAAACAGGCCCTTTATTTACAAAGCCCAATTTAAAAGCCGCCCAGAAAAGCCCAAAAGAGGCCACTAGGGTTTTTCAGAAACTTATACCCCAGCCTCCCACATTTTTATACTAACCCTTTCTTCTTTCCTCAACTCTCTGCCCCCCTCTCCATTTTGCCGTCGACCAAGGTTTTTCTCTCTCCTCTTCAACTTCATCGTTCTCTCTAATTTATGTAGATTCAATCGGCAAATCACAAGTTATTAACGAACTGTAATTTGTTTGATGATTGCAGGAAGGTAGGTTTGTTTTAGGGCAAAGCAAAAAAAACAGCGAAAATGGTTGAGCAAACTAAGGGACGAAAGGAAGAGGTTGTGACTCGGGAGTACACCATCAACCTACACAAGCGTCTTCATGGATGGTAGATTTCTCTCTCTTCATCTTAATTTGGTTCTGATTCTACCAACTGTGATTTTTGAATTGGGGTTTTTGATTTAGGGTTCTATTATTTATCAAATGTTGGTAACAATTTGGGATTTTTTATAGTTTGTACGATTTATATTATTGAAATGCTAGGTTTTTGGATGAAAATCGTTATTCTTGATCTGAAATTATTCGAGCATTCATCTAATGTTCGTGTCGATGTATTGTGGTCTATGATTATGTTTTCTCCGTGTTTTTTTGTTGATAGATTGAGATTTCTAAGTTTCTGTGGTGGATCTAAGTTGCTAATGGTCATTGTGGTGTGCCTTCAATGCTAATATCTACTGTTTTATAATAATGTGTGTTTTGTGGTTATGTTTGGTTTGTGGAATAACACGTTGCATGAAATTCATATTAGCATTGGTGCTATAAAATTATGAACCTTTGTATGGTAACTGATTTTAGTGTATTTTCCTAACAAACTCAGGTCAAGTTTTGTAATATGGTATGAGTTTTCATAAACTTTGCTTTAGCTTTGAATATCTAGGGTTAACTTTACAATTTAATGCTTAGATTTTGCTTTGCTCAATGGGCTTGTGGAAGGGAGTGTTTGAGTGGCGTTGAGCTACTATCCTATCATCTCAACATTCATATATTTTTCTACGAATAAAAGGACTAAGTCTACCCTTGATAGTTTGAATGTATAACTTGGTTAATTTCTATCTTCTAAAGTAGCTTTCATAACAGTCTTTCTTCATAATTAGAAAGTTGTGTATACCTGGTGTGCAAAGTAAGAAAAAGAGAAATTCATGTGGTTTCTAGCACCCTAGTGAAGTTATAATGCTAATGTTAGTGGTGTGGTACTAACACTGTGGAATTAGAGGGTTGACAGATTAACTATAAGGTCATGTGTAGAGCTCTTCAGTGTTGCTTTCCTCCTATCAAATAAAGACCCTGCACTCCTGACGTGTCGATCTCTCTGAAATGGAAATTGATTTACGCACAACTATTATGGCTTTATCTTCCTTGGATACTAGGTTCTTACGAGTAATATCAAATCATGCATTTAACTCTTGTTATAGTCTATCTATGTTCTGTTTGCATAGATACATGGTTCTTACGAGTAATATCAAATCATGCATTTAACTCTTTGTTATAGTCTATCTATGTTCTGTTTGCATAGCTGTGGCTTAGGACTTGGGTATATAGATTTTGTTTAGTGGGTCACTTACATGTACAAGACTACAAGTGCCATCTATTGTCATTGTAAGTGTTATCTTTCTTTTTTTGGCTTTTGACATTTTAGTTTATCTCTACTCTTATCTTGATTTTCTTTAATGATCATGGACAAGTAGTTTAGCTTATCGAGTGTATTGTTTTATGTTTATCATAATTTTGTTAGCTAATTAGGTGTATTGTTACGTGTTAATCATAATTGTGAAATTGCAATGTAACTAGTGAGTCATGTTTTGATCATCAGTTCACTAATTTCTGTTGCAACTTCAATTCTGGCAGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAAATCAGAACTTTCGCCAAGAAGGCAATGGGAACCAATGATGTTAGAGTAGACGTGAAGCTTAACAAGCAAATCTGGAGCAGGGGAATCAGGAGTGTTCCAAGGAGAATCCGTGTTCGCATTGCTCGCAAGAGAAATGATGACGAGGATGCCAAGGAAGAGCTTTACTCTTTGGTGACTGTTGCTGAAATTCCAGCTGAAGGTTTGAAGGGTCTTGGTACTAAGGTTATTGAAGACGAAGATTAAGCAATTAAGTTCTTCTTGAGATTTTACTAGATAGTTTGCACTTTGTTTTAAAGGCTTTTTTGAACAATAGAAGGTATTTTGGTGATGTTTATTGCAGTGAGATGGTCACAAGATATGAATTTTGATTTTGTTTTGTTAGTAATGACACCTATTATCCTTCGAAATTGAAACATGTATGACTTGCAATTTTGCTGTTTTTACGTTGATTTTTATTAACTGAATTTTTGAAGTGCCATACTGAATTTCTGACTATAATGACTAGCTGGGTTTGCCTTCCCGCTCTCTTTGATACAGTGGCTGCTGTTTTAGGTGGTGTTATTTTCTTAGTTTGTGTTGATTTAAAAATATGAAAAGAAATCAGAGGCTATATTTTTGTTGTCGAGCATAGTCTGTAATTTTCTGAATTTCAAGTCATTAGAAGTTCAAGATTAGGTGACCAGGAACAGGCGTGCTGTTTATATATTTACCTGAAAACAGAATCACAGATAAGAAATCACAAAATTACATTATTTTTGCCTGCCCCTGATGCCTTAGTATAGTACAATTTATTCCTACCCTTTTATACGAGGAGGAGAGGCC

mRNA sequence

ATGGTGAAAGATAGAGAAATTAATAGATCTAGCTCTATATATATGGATTTCAAGGATAGGCGCTGCCTCCCACATTTTTATACTAACCCTTTCTTCTTTCCTCAACTCTCTGCCCCCCTCTCCATTTTGCCGTCGACCAAGGGCAAAGCAAAAAAAACAGCGAAAATGGTTGAGCAAACTAAGGGACGAAAGGAAGAGGTTGTGACTCGGGAGTACACCATCAACCTACACAAGCGTCTTCATGGATGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAAATCAGAACTTTCGCCAAGAAGGCAATGGGAACCAATGATGTTAGAGTAGACGTGAAGCTTAACAAGCAAATCTGGAGCAGGGGAATCAGGAGTGTTCCAAGGAGAATCCGTGTTCGCATTGCTCGCAAGAGAAATGATGACGAGGATGCCAAGGAAGAGCTTTACTCTTTGGTGACTGTTGCTGAAATTCCAGCTGAAGGTTTGAAGGGTCTTGGTACTAAGGTTATTGAAGACGAAGATTAAGCAATTAAGTTCTTCTTGAGATTTTACTAGATAGTTTGCACTTTGTTTTAAAGGCTTTTTTGAACAATAGAAGGTATTTTGGTGATGTTTATTGCAGTGAGATGGTCACAAGATATGAATTTTGATTTTGTTTTGTTAGTAATGACACCTATTATCCTTCGAAATTGAAACATGTATGACTTGCAATTTTGCTGTTTTTACGTTGATTTTTATTAACTGAATTTTTGAAGTGCCATACTGAATTTCTGACTATAATGACTAGCTGGGTTTGCCTTCCCGCTCTCTTTGATACAGTGGCTGCTGTTTTAGGTGGTGTTATTTTCTTAGTTTGTGTTGATTTAAAAATATGAAAAGAAATCAGAGGCTATATTTTTGTTGTCGAGCATAGTCTGTAATTTTCTGAATTTCAAGTCATTAGAAGTTCAAGATTAGGTGACCAGGAACAGGCGTGCTGTTTATATATTTACCTGAAAACAGAATCACAGATAAGAAATCACAAAATTACATTATTTTTGCCTGCCCCTGATGCCTTAGTATAGTACAATTTATTCCTACCCTTTTATACGAGGAGGAGAGGCC

Coding sequence (CDS)

ATGGTGAAAGATAGAGAAATTAATAGATCTAGCTCTATATATATGGATTTCAAGGATAGGCGCTGCCTCCCACATTTTTATACTAACCCTTTCTTCTTTCCTCAACTCTCTGCCCCCCTCTCCATTTTGCCGTCGACCAAGGGCAAAGCAAAAAAAACAGCGAAAATGGTTGAGCAAACTAAGGGACGAAAGGAAGAGGTTGTGACTCGGGAGTACACCATCAACCTACACAAGCGTCTTCATGGATGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAAATCAGAACTTTCGCCAAGAAGGCAATGGGAACCAATGATGTTAGAGTAGACGTGAAGCTTAACAAGCAAATCTGGAGCAGGGGAATCAGGAGTGTTCCAAGGAGAATCCGTGTTCGCATTGCTCGCAAGAGAAATGATGACGAGGATGCCAAGGAAGAGCTTTACTCTTTGGTGACTGTTGCTGAAATTCCAGCTGAAGGTTTGAAGGGTCTTGGTACTAAGGTTATTGAAGACGAAGATTAA

Protein sequence

MVKDREINRSSSIYMDFKDRRCLPHFYTNPFFFPQLSAPLSILPSTKGKAKKTAKMVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLNKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20935	Spo20935	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20935.1	Spo20935.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20935.1.exon.1	Spo20935.1.exon.1	exon
Spo20935.1.exon.2	Spo20935.1.exon.2	exon
Spo20935.1.exon.3	Spo20935.1.exon.3	exon
Spo20935.1.exon.4	Spo20935.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20935.1.CDS.1	Spo20935.1.CDS.1	CDS
Spo20935.1.CDS.2	Spo20935.1.CDS.2	CDS
Spo20935.1.CDS.3	Spo20935.1.CDS.3	CDS
Spo20935.1.CDS.4	Spo20935.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20935.1.utr3p.1	Spo20935.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo20935.1 vs. NCBI nr
Match: gi|902225832|gb|KNA20207.1| (hypothetical protein SOVF_054480 [Spinacia oleracea])

HSP 1 Score: 235.3 bits (599), Expect = 7.900e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120

[Close]

BLAST of Spo20935.1 vs. NCBI nr
Match: gi|470102129|ref|XP_004287511.1| (PREDICTED: 60S ribosomal protein L31 [Fragaria vesca subsp. vesca])

HSP 1 Score: 225.7 bits (574), Expect = 6.200e-56
Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTRE+TINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIE++D
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]

BLAST of Spo20935.1 vs. NCBI nr
Match: gi|731327320|ref|XP_010674463.1| (PREDICTED: 60S ribosomal protein L31 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.7 bits (574), Expect = 6.200e-56
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIK+IR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKQIREFAEKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120

[Close]

BLAST of Spo20935.1 vs. NCBI nr
Match: gi|595808464|ref|XP_007202764.1| (hypothetical protein PRUPE_ppa013471mg [Prunus persica])

HSP 1 Score: 225.3 bits (573), Expect = 8.100e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGL GLGTKVIE++D
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLSGLGTKVIEEDD 120

[Close]

BLAST of Spo20935.1 vs. NCBI nr
Match: gi|694323018|ref|XP_009352600.1| (PREDICTED: 60S ribosomal protein L31 [Pyrus x bretschneideri])

HSP 1 Score: 225.3 bits (573), Expect = 8.100e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FAKKAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAKKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGL GLGTKVIE+++
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLSGLGTKVIEEDE 120

[Close]

BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054480 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.500e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120

[Close]

BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQ15_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g079270 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.300e-56
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIK+IR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKQIREFAEKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120

[Close]

BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: M5W3Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013471mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.700e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGL GLGTKVIE++D
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLSGLGTKVIEEDD 120

[Close]

BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: W9QLF2_9ROSA (60S ribosomal protein L31 OS=Morus notabilis GN=L484_005476 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.400e-56
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDE 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP EGLKGLGTKVIE+E
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPTEGLKGLGTKVIEEE 119

[Close]

BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: M0ZHK6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000345 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.300e-55
Identity = 112/120 (93.33%), Postives = 117/120 (97.50%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTK+IEDE+
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKIIEDEE 120

[Close]

BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.400e-55
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           M ++TKGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIR FA+KAMGT DVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+IEDED
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]

BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.600e-54
Identity = 107/120 (89.17%), Postives = 115/120 (95.83%), Query Frame = 1

		  
Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++IE++D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]

BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.600e-51
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 1

		  
Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           +E+ KGRKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIR FA KAMGT DVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]

BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 6.000e-51
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 1

		  
Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAP AIKEIR FA+KAMGT DVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+ED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]

BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.900e-51
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = 1

		  
Query: 60  TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLNKQI 119
           +K RKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIR FA+KAMGT DVRVDVKLNK I
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 120 WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VI++E+
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

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BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Match: AT2G19740.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 203.8 bits (517), Expect = 9.000e-53
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 1

		  
Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           +E+ KGRKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIR FA KAMGT DVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

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BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Match: AT5G56710.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 201.8 bits (512), Expect = 3.400e-52
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 1

		  
Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAP AIKEIR FA+KAMGT DVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+ED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

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BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Match: AT4G26230.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 200.7 bits (509), Expect = 7.600e-52
Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = 1

		  
Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIR FA+K MGT DVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+IE+ED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

The following BLAST results are available for this feature:

BLAST of Spo20935.1 vs. NCBI nr
BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
BLAST of Spo20935.1 vs. TAIR (Arabidopsis)

BLAST of Spo20935.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902225832\|gb\|KNA20207.1\|	7.9e-59	100.	hypothetical protein SOVF_0544...	[more]
gi\|470102129\|ref\|XP_004287511.1\|	6.2e-56	95.0	PREDICTED: 60S ribosomal prote...	[more]
gi\|731327320\|ref\|XP_010674463.1\|	6.2e-56	95.8	PREDICTED: 60S ribosomal prote...	[more]
gi\|595808464\|ref\|XP_007202764.1\|	8.1e-56	95.0	hypothetical protein PRUPE_ppa...	[more]
gi\|694323018\|ref\|XP_009352600.1\|	8.1e-56	95.0	PREDICTED: 60S ribosomal prote...	[more]

BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RMZ6_SPIOL	5.5e-59	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CQ15_BETVU	4.3e-56	95.8	Uncharacterized protein OS=Bet...	[more]
M5W3Y3_PRUPE	5.7e-56	95.0	Uncharacterized protein OS=Pru...	[more]
W9QLF2_9ROSA	7.4e-56	95.8	60S ribosomal protein L31 OS=M...	[more]
M0ZHK6_SOLTU	6.3e-55	93.3	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
RL31_NICGU	1.4e-55	90.8	60S ribosomal protein L31 OS=N...	[more]
RL31_PANGI	2.6e-54	89.1	60S ribosomal protein L31 OS=P...	[more]
RL311_ARATH	1.6e-51	85.7	60S ribosomal protein L31-1 OS...	[more]
RL313_ARATH	6.0e-51	84.0	60S ribosomal protein L31-3 OS...	[more]
RL31_PERFR	7.9e-51	87.9	60S ribosomal protein L31 OS=P...	[more]

BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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Match Name	E-value	Identity	Description
AT2G19740.1	9.0e-53	85.7	Ribosomal protein L31e family ...	[more]
AT5G56710.1	3.4e-52	84.0	Ribosomal protein L31e family ...	[more]
AT4G26230.1	7.6e-52	83.1	Ribosomal protein L31e family ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000054	Ribosomal protein L31e	PRODOM	PD006030		coord: 58..119 score: 2.0
IPR000054	Ribosomal protein L31e	PANTHER	PTHR10956	60S RIBOSOMAL PROTEIN L31	coord: 50..175 score: 6.4
IPR000054	Ribosomal protein L31e	PFAM	PF01198	Ribosomal_L31e	coord: 66..147 score: 6.8
IPR000054	Ribosomal protein L31e	SMART	SM01380	Ribosomal_L31e_2	coord: 65..148 score: 1.1
IPR020052	Ribosomal protein L31e, conserved site	PROSITE	PS01144	RIBOSOMAL_L31E	coord: 109..123 scor
IPR023621	Ribosomal protein L31e domain	GENE3D	3.10.440.10		coord: 65..152 score: 6.0
IPR023621	Ribosomal protein L31e domain	unknown	SSF54575	Ribosomal protein L31e	coord: 66..147 score: 1.02
None	No IPR available	PANTHER	PTHR10956:SF12	SUBFAMILY NOT NAMED	coord: 50..175 score: 6.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome