Spo20970.1 (mRNA) | SpinachBase

Overview


Name	Spo20970.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	GTF2H2
Location	SpoScf_00918 : 175938 .. 182099 (+)
Sequence length	1344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTGGGAGAAGAGGCTAAGAAACTCAGGGTAAACAACGAAATAAGAGGGGAGAAAAAAAAAAGGAAAATGGAATTTTAAAGCAGTAAGAGAAATGCAAGGGTATTTTAGACTTTTAAATGGGGAACATCAAAAGTGTAATTACAAATTTAACCTCAGCTGTTCCTTTATATAATAGAGAAGATAATATGTATGTTCATTGTATCCTCTTCAATATTTTCGAAATATTCAAGGATTCTTGTTCTCCAACCAAAACCCTAGCTATTGTATTATATATATACCCCATAATAATATTCTCTCTTATGTCTCCAGTTTATTCATAGGCACCTACAAATACAAACTCTGTACTCGACTTTTTCGGCTCTGGTCACAAGCCGGATTTTCAACTATCCGCTTTTTCAGATACCCAAAACGTCGGATACCCGATAAATCGTAATTGATTTATTACGAGAAATTCCGAGTTAATCTCAGTGATTGGAAAAAATTTCCAATCAAATGCCATTTTCGTAAATATTTTGCTTGAAAACTATAGATGGTATAATATTAGGTGTTGACTGTATATTTGTAGTTATTGACTGCATATTATTTGGTGTTGATTGTATACCACTTATCGTTGACGGTATATTTTATGATTGCTGATGAATTACTAAAATGCAATATTGTTTATTGGTAAGTGATTGACTGTATATTTATAGTAGTGTATTGTTTATTAGTAGAAGTTTATTGTATATTACGACCTGTTGACTGTATATTATATAGTTGTTTATGTATTATGAGAATACAATAATGACTGTACATGTGGCCCATAGTTAATGACATGTCATTGTACTTTGACCCGCATTTAACGGCATTTTTGTAATAAAAACGTCAATTATTTACAAAAATGGAGTTAAGCTAAAAAATGGGGTCTAACCTTTTGAATTTTTCACCGTTTAGGACCTATACCTTTTTTTTTCACCGTTTGGGACCTCATTCCCCTTTTCCGGCCAAATTTACTAGAGTACGTTAAAAGGTTAGGTCCTTGGGTTAAAAGGTTAAAGTAAATCAAAAGTTTGAGGACTAACCTTTTCGTTTTTTCACCTTTCAGGACCTGAACTTTCTTTTTTCACCTTTTGAGACCTCATTAAAGTTTTCATGTAATTCCAATTCAATTATTAAAGTTTCTAACCATTAACATATACTACCTTCGTTCTTTAATGTTCTTTATGCTTTGGAATATGTGTCTAAAGTATGAAAACTTTGATCGTGGATTCTCACTGGTATATACATCAAAGTGTTATCATGTAAGATCTTGTTAGATTGGTCTCGTTATGTATTTTCAAAATATCAAATTTTTATGATTTTTTCACATACGGAAATGGATATATAAGTCGTTAAATATTGCTTTGGAGTACGCGCAAATAATAAGCGTAAAGAACATTAAGGAACGGAGGTAGTAATAAGCTCAAATTAAAATAATATGTAACGTAATTCATAAATTTAGCCCATATATAAATTGATTTGGGTATCAAATAATCTAATGAATAAAGAAGCAAATAATTATTTACAAACTGATCATATTTTATATATTCGGTTATGGTGTCCAATGAAAATAGAAGAATTAAGCAATTTATATAGTAGAGTACGATATTCATACAATTATACTCAAAGGTTTACGGGGATGGTGGAACTAAAAATACACTACGGAATTTTCCGCCCTGGACCCAAGTTGTTAGGAAGTTCTGCCATTGATGGTATATCCTCACAATTGTTTGTGTTTTGTTTGAAGAATATTAATAATGTCCACACAAAAACGTAAAATTAATAAAAATAGGTTAATTTTAAATGAATTTTGATTTGATCACAAGTTAATATATCATACTAGTTCTTGATTGTTTTATGAGAGTAAAGACAATTGGTTTATTGATGCTCATATTTTATGAGGTACTTAAATGATTTATGCTTAACTCGATCAAAATTAATCAGCAATCTCCGAATTAAAATTTACGACCTCAAATTTTCTATAAACATATTCAAATAAGTTGTTATTGGATTACGTAAATTAAGTTTCAACTATTAAATGTCTTATGAATGAGTAAAGATTATCTATGATGTTTGGAGAAGAATACTATGTAGTTTTAATTGTATGATGGGGTTTGAGAAAGATGAATTATTATTATTATTATTGTTAAATATATTAATAACAATTATTACATAATAATTAATAAAAATAAAAATATTAATAACTATTATTATAATTATTAATTTGAGCGCTAACTCTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGAGTGATAGTATGGTTAACGGTGAGTTAAACTATGGTTAACTGGCCAGAAAATGAATATGAGTCCCCAAAAGGTGAAAAAAAAAAGTTAAGGTCCTAAAGGGTGAAAAAACCAAAAGGTTGGACCCCAACCTTTAGCTTAACTCTACAAATTATTTTTCAGTATTCTAATTTCGTCATTTTGGGTTCTTACGGGGTGTTGATGGTGGCGTTAGGTAGCATTGGCGATTTGATGGCGAATCGTCAGGGTAATAACTTTGTAGTATAATTTTTATGATATTGATTTTTGGGTAGCTTGGGCTGCGGCGGTGGTGGAGTAACATTAGTTAGGCTGTCATGGTGTTTGTTTGATCGAGTTTGCACTGTCGATTTTATTTTCAGTTAATATAATTCCATATACCCACCTCGCCCTTGAGTATGAGAATTCCATACCATAGAGGTTTTGAAGGTGGGTCCCCAAATTTTAAATTTACTCTTATAAAAATAGTAAACCAAACATCAAGTATGGGGTTGGATAATTTCAAACACATACATGATTTCAAAATATGATGAACCAAATACACACTTAATGATTTAATTTCCATTTGTCTACTTGGGCCAGGCCCAAATTTGTAGCACGGTTTCGAATATAGGCTATGCAAGTGTGAAATACAGAGTAAGTGAGATTTTCTTCAACCTATCTTCTTCAACCTAATTTCAGTTTTCTGACGGAAAATTTTTCATACAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCTATTTTTCTGAAACGGTTTCGGCGCGCGTTTCCCGGTTTCCCCGTTCCAGGACGTTTCGGAAACGGTAAGTCGTGATTTTTTGGCGTTTCCGTGCTTCGTAGCTTTTTTTCAATTTGTTTTTGATTAAAAATACTATGTTTTGGGCATAATTTAGTTTTATTTTGTTGGAGGGAGCAGAGTAGAAAAGAGCAATAATTTAAGGACATAACAAAGTATAGTTTGATTGAATAAGAATTTGGGCAATTTTTTTTTTTTTGTTATTTGAATTCTGGACCTTGAGGAAATGTAGGTGGGGGGTCGTTCTGTTCATGAGAAGATAGTGTAGAATTAAGTTTTCAAGACTGGTCTTGTCAAATTGAAGAATTTTACTGGTTAATTGTTTGGCTGCTAGTAAGTATATGCTCTATACCTGCAATTTTACTGGTTAATTGTTTGTCTGCTAGTAAATATATATATGCTCTATACCTGCAATTTTTTTTTTTCATAGTTAGGATCAAAGATTGTTAATTGAAGCACATAAAACCAGCTATCGTGCTGTGTATGTCGAGTTTCATCTAAGAAACACAATGACTTTTGAGTTCTGAGGTTGTAAATTGTGACTAAAAGAGAAGCAATCCCCAAGCCGAGCCTAAGCCAAGGTACTTGAGACAGGCAACAGGTCAGTGCCCTGGTTCAGTGACTTCAGTCAGTTTTGCCCCTAATTGCTAGAGGAGAAATTAGGGGGAGGGTAGAAAGTGAAAGAAGATAGTACATGTAAATTTTTTTTGCAGGTCTGAATATGTCTTGGAGTTTGTACTTGCACCATAAAAACATTTATTTTCTTTAGTCTTCGTTTTTTCTTGGATTTGTTTTTCTCTCAACTATTCTAGTAAAAGTGCTTTGGTGGCTCATTGATTTTTGTATAATAGTACCTGATTTTTAATATTTATCATGCTTAGATCTAGAGAGGATGAACAGCATTGAACATAGGGCGGTTAGCAATAGCAGAGGAAGACGGCTTAACCGAGATGAAGATGAGGATGATGAAGATGAAGATAATGATATGTCTGCATGGGAGAAAGCCTATACCGATGAGAGATCATGGGAATCTTTGCAAGAAGATGAATCTGGGCTACTTCGTCCAATTGATAATACGTCGATCTACCATGCTCAATATCGTCGGCGTATTCGTTCCATCTCGTCTACCTCAACCTCTGCTCGAATTCAGAAAGGCCTTATTCGCTATATCTATGTCGTCATGGATTTCTCAAGGGTAATGAAGTTCCAAATATGTAGTATTTTTCATTTTAAGCAAAACCCAACCTTCACTGCTAGGTATAGCTTTTGGGAAAGGCTAATTTTTATTATGATTTCAACTTTCAACACCAAATACAGCAGGTTCTTTCTTTTGTTTTTAGAGGGTGGATATTGGAGAGGGTTGGCATCGAGGGATGAAATTTTTTACTGCTAATTAGAAGGATCTCTGTTTATACATGATGTTGTTCTCTGATCAGTATCTCTGATAGACCCTGTAATGTTTTTATACAAATACATTGCCGGACTTTGCATGCAGCCATGAAGTTCTTGACTATAAATATCTGAAGCATTTGGCACACATTATATGCTTTAAGCCTTGAGTCACTGATCATAAATTTAAAGTTCGGATGTTCACTAGTTTTAACCTGGATAAGTACATGACTGGGGAAAACTATGATAATGCTTCACTGTTCATTGATGTGAGGGCTTGAAATATTGAGGAGAATTTTTTTGCGTAGCTACTCACTCAGTCATTGTAGGTATATCATTTAGATATTTGGAGCAGCTCAACACCTGTCTGTTCTATTTTAAATTTTTTTAATCCTTCTCTGTAGGCAGCAGCGGAGATGGATTTTAAACCAAGCAGAATGGCCGTTGTTGCCAAACATGTAGAGGCTTTTGTAAGGGAGTTTTTTGACCAAAATCCACTTAGTCAAATTGGTCTTGTGGCAATTAAAGACGGTGTTTCTCATTGCCTAACGGATATGGGTGGTAGCCCGGAGTCTCATATTAAGGCTTTGATGAAGAAGTTGGAGTGTTCAGGGGATGCGTCTTTACAGAATGCCTTAGAACTTGTTCATGAATGCTTGAATCAAATTCCATCATATGGCCACCGTGAAGTTATAATTTTGTATTCGGCTCTTAGTACCTGTGATCCAGGTGACATAATGGAGACTATTCAAAAGTGCAAGAAGTCGAAGATTAGGTGTTCAATACTGGGTCTTTCTGCAGAGATGTTTATTTGCAAACACATATGCCAGGAAACAGGTGGATCATATGCTATTGCCTTGGATGAGGTGAGTTTTTACTACTGGAAAAGTGTATGATATGAAATTATTTCTAGTTGTAAACTTAATGGTGAAGATGTTTAGTGCTAATTATAGTGCAATATACTCTTCTAGTAATAGTTAACTGTTGAATGACTGATTTAGTTTTCCTTCCTTGTAGTTCCATCTGAAAGAGTTGTTGTTGGAACATGCACCTCCTCCTCCAGCCATCGCTGAGTATGCAATTGCTAACTTGATCAAGATGGGTTTTCCACAAAGAGCAGCGGAAGGCGTGGTCTCAATATGTGTATGTCATAAAGAGGCTAAGGTTGGTGCTGGATACACCTGTCCGAAATGCAAGGCTCGTGTTTGTGAGCTGCCCACAGAATGTCGTATATGTGGGCTAACACTTGTTTCTTCTCCCCATTTAGCAAGGTCATATCATCATCTCTTTCCAATAACACCGTTTGATGAGGTATCTTTTCCAAACAGAAAGATTGCCGGACAGAAATCATATGAAACATGCTTTGGATGCATGCACAATCTGATGGATCCTGGTAAGCATTCATACATCAGTAGTTGGGAGTTCGAATAA

mRNA sequence

ATGGGAGTGGGAGAAGAGGCTAAGAAACTCAGGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCTATTTTTCTGAAACGGTTTCGGCGCGCGTTTCCCGGTTTCCCCGTTCCAGGACGTTTCGGAAACGATCTAGAGAGGATGAACAGCATTGAACATAGGGCGGTTAGCAATAGCAGAGGAAGACGGCTTAACCGAGATGAAGATGAGGATGATGAAGATGAAGATAATGATATGTCTGCATGGGAGAAAGCCTATACCGATGAGAGATCATGGGAATCTTTGCAAGAAGATGAATCTGGGCTACTTCGTCCAATTGATAATACGTCGATCTACCATGCTCAATATCGTCGGCGTATTCGTTCCATCTCGTCTACCTCAACCTCTGCTCGAATTCAGAAAGGCCTTATTCGCTATATCTATGTCGTCATGGATTTCTCAAGGGCAGCAGCGGAGATGGATTTTAAACCAAGCAGAATGGCCGTTGTTGCCAAACATGTAGAGGCTTTTGTAAGGGAGTTTTTTGACCAAAATCCACTTAGTCAAATTGGTCTTGTGGCAATTAAAGACGGTGTTTCTCATTGCCTAACGGATATGGGTGGTAGCCCGGAGTCTCATATTAAGGCTTTGATGAAGAAGTTGGAGTGTTCAGGGGATGCGTCTTTACAGAATGCCTTAGAACTTGTTCATGAATGCTTGAATCAAATTCCATCATATGGCCACCGTGAAGTTATAATTTTGTATTCGGCTCTTAGTACCTGTGATCCAGGTGACATAATGGAGACTATTCAAAAGTGCAAGAAGTCGAAGATTAGGTGTTCAATACTGGGTCTTTCTGCAGAGATGTTTATTTGCAAACACATATGCCAGGAAACAGGTGGATCATATGCTATTGCCTTGGATGAGTTCCATCTGAAAGAGTTGTTGTTGGAACATGCACCTCCTCCTCCAGCCATCGCTGAGTATGCAATTGCTAACTTGATCAAGATGGGTTTTCCACAAAGAGCAGCGGAAGGCGTGGTCTCAATATGTGTATGTCATAAAGAGGCTAAGGTTGGTGCTGGATACACCTGTCCGAAATGCAAGGCTCGTGTTTGTGAGCTGCCCACAGAATGTCGTATATGTGGGCTAACACTTGTTTCTTCTCCCCATTTAGCAAGGTCATATCATCATCTCTTTCCAATAACACCGTTTGATGAGGTATCTTTTCCAAACAGAAAGATTGCCGGACAGAAATCATATGAAACATGCTTTGGATGCATGCACAATCTGATGGATCCTGGTAAGCATTCATACATCAGTAGTTGGGAGTTCGAATAA

Coding sequence (CDS)

ATGGGAGTGGGAGAAGAGGCTAAGAAACTCAGGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCTATTTTTCTGAAACGGTTTCGGCGCGCGTTTCCCGGTTTCCCCGTTCCAGGACGTTTCGGAAACGATCTAGAGAGGATGAACAGCATTGAACATAGGGCGGTTAGCAATAGCAGAGGAAGACGGCTTAACCGAGATGAAGATGAGGATGATGAAGATGAAGATAATGATATGTCTGCATGGGAGAAAGCCTATACCGATGAGAGATCATGGGAATCTTTGCAAGAAGATGAATCTGGGCTACTTCGTCCAATTGATAATACGTCGATCTACCATGCTCAATATCGTCGGCGTATTCGTTCCATCTCGTCTACCTCAACCTCTGCTCGAATTCAGAAAGGCCTTATTCGCTATATCTATGTCGTCATGGATTTCTCAAGGGCAGCAGCGGAGATGGATTTTAAACCAAGCAGAATGGCCGTTGTTGCCAAACATGTAGAGGCTTTTGTAAGGGAGTTTTTTGACCAAAATCCACTTAGTCAAATTGGTCTTGTGGCAATTAAAGACGGTGTTTCTCATTGCCTAACGGATATGGGTGGTAGCCCGGAGTCTCATATTAAGGCTTTGATGAAGAAGTTGGAGTGTTCAGGGGATGCGTCTTTACAGAATGCCTTAGAACTTGTTCATGAATGCTTGAATCAAATTCCATCATATGGCCACCGTGAAGTTATAATTTTGTATTCGGCTCTTAGTACCTGTGATCCAGGTGACATAATGGAGACTATTCAAAAGTGCAAGAAGTCGAAGATTAGGTGTTCAATACTGGGTCTTTCTGCAGAGATGTTTATTTGCAAACACATATGCCAGGAAACAGGTGGATCATATGCTATTGCCTTGGATGAGTTCCATCTGAAAGAGTTGTTGTTGGAACATGCACCTCCTCCTCCAGCCATCGCTGAGTATGCAATTGCTAACTTGATCAAGATGGGTTTTCCACAAAGAGCAGCGGAAGGCGTGGTCTCAATATGTGTATGTCATAAAGAGGCTAAGGTTGGTGCTGGATACACCTGTCCGAAATGCAAGGCTCGTGTTTGTGAGCTGCCCACAGAATGTCGTATATGTGGGCTAACACTTGTTTCTTCTCCCCATTTAGCAAGGTCATATCATCATCTCTTTCCAATAACACCGTTTGATGAGGTATCTTTTCCAAACAGAAAGATTGCCGGACAGAAATCATATGAAACATGCTTTGGATGCATGCACAATCTGATGGATCCTGGTAAGCATTCATACATCAGTAGTTGGGAGTTCGAATAA

Protein sequence

MGVGEEAKKLRIEISFPIRFRDEFSFKHVSIFLKRFRRAFPGFPVPGRFGNDLERMNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCFGCMHNLMDPGKHSYISSWEFE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo20970	Spo20970	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo20970.1	Spo20970.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20970.1.exon.1	Spo20970.1.exon.1	exon
Spo20970.1.exon.2	Spo20970.1.exon.2	exon
Spo20970.1.exon.3	Spo20970.1.exon.3	exon
Spo20970.1.exon.4	Spo20970.1.exon.4	exon
Spo20970.1.exon.5	Spo20970.1.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo20970.1.CDS.1	Spo20970.1.CDS.1	CDS
Spo20970.1.CDS.2	Spo20970.1.CDS.2	CDS
Spo20970.1.CDS.3	Spo20970.1.CDS.3	CDS
Spo20970.1.CDS.4	Spo20970.1.CDS.4	CDS
Spo20970.1.CDS.5	Spo20970.1.CDS.5	CDS

Homology

[Close]

BLAST of Spo20970.1 vs. NCBI nr
Match: gi|902179308|gb|KNA09327.1| (hypothetical protein SOVF_154630 [Spinacia oleracea])

HSP 1 Score: 775.8 bits (2002), Expect = 4.100e-221
Identity = 382/384 (99.48%), Postives = 382/384 (99.48%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID
Sbjct: 1   MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 60

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV
Sbjct: 61  NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 120

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE
Sbjct: 121 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 180

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH
Sbjct: 181 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 240

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH
Sbjct: 241 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 300

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK
Sbjct: 301 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 360

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           IAGQKSYETCFGCMHNLMDPG  S
Sbjct: 361 IAGQKSYETCFGCMHNLMDPGTGS 384

[Close]

BLAST of Spo20970.1 vs. NCBI nr
Match: gi|731374647|ref|XP_010667027.1| (PREDICTED: general transcription factor IIH subunit 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 722.6 bits (1864), Expect = 4.200e-205
Identity = 351/384 (91.41%), Postives = 367/384 (95.57%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           +NSIEHR V NSRGRRL RDEDEDDEDEDNDMSAWE+AYTDERSWESLQEDESGLLRPID
Sbjct: 2   INSIEHREVRNSRGRRLERDEDEDDEDEDNDMSAWERAYTDERSWESLQEDESGLLRPID 61

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           N ++YHAQYRRRIRSISSTST+ARIQKGLIRYIYVVMDFSRAA EMDFKPSRMAVVAKHV
Sbjct: 62  NKNLYHAQYRRRIRSISSTSTTARIQKGLIRYIYVVMDFSRAAGEMDFKPSRMAVVAKHV 121

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLV+IKDGV+HCLTDMGGSPESHIKALM KLECSGDASLQNALE
Sbjct: 122 EAFVREFFDQNPLSQIGLVSIKDGVAHCLTDMGGSPESHIKALMNKLECSGDASLQNALE 181

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQ+PSYGHREV+ILYSALSTCDPGDIMETI KCKKSKIRCSI+GLSAEMFICKH
Sbjct: 182 LVHECLNQVPSYGHREVLILYSALSTCDPGDIMETINKCKKSKIRCSIVGLSAEMFICKH 241

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSY+IALDEFHLKELLLEHAPPPPAIAEYA+ANLIKMGFPQRAAEGVVSICVCH
Sbjct: 242 ICQETGGSYSIALDEFHLKELLLEHAPPPPAIAEYAVANLIKMGFPQRAAEGVVSICVCH 301

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPF+EVS  N  
Sbjct: 302 KEAKVGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFNEVSSSNGN 361

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           I GQ+S ETCFGCMHNL + G  S
Sbjct: 362 IIGQRSLETCFGCMHNLTNSGTGS 385

[Close]

BLAST of Spo20970.1 vs. NCBI nr
Match: gi|297746227|emb|CBI16283.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 632.9 bits (1631), Expect = 4.300e-178
Identity = 301/385 (78.18%), Postives = 344/385 (89.35%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDND----MSAWEKAYTDERSWESLQEDESGLL 115
           MN +EHR  ++  GRRL+ +E+E++EDED      + AWE+AY DERSWESLQEDESGLL
Sbjct: 62  MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 121

Query: 116 RPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVV 175
           RPIDN +IYHAQYRRRIRS+ S++T+ARIQKGLIRY+Y+V+D SRAA+EMDFKPSRMAVV
Sbjct: 122 RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 181

Query: 176 AKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQ 235
           AKH+EAF+REFFDQNPLSQIGLV IKDG++ CLTD+GGSP+SH+KALM KLECSGD+SLQ
Sbjct: 182 AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 241

Query: 236 NALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMF 295
           NAL+LVH  LNQIPSYGHREV+ILYSALSTCDPGDIMETIQ+CKKSKIRCS++GLSAE+F
Sbjct: 242 NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 301

Query: 296 ICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSI 355
           IC+H+CQETGGSY++ALDE H KELLLEHAPPPPAIAE+AIANLIKMGFPQRAAEGV+SI
Sbjct: 302 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 361

Query: 356 CVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSF 415
           C CHKEAKVG GYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEVS 
Sbjct: 362 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 421

Query: 416 PNRKIAGQKSYETCFGCMHNLMDPG 437
                  Q+S   CFGC  +L+ PG
Sbjct: 422 SLLNNPHQRSSRACFGCQESLLIPG 446

[Close]

BLAST of Spo20970.1 vs. NCBI nr
Match: gi|225435253|ref|XP_002284994.1| (PREDICTED: general transcription factor IIH subunit 2 [Vitis vinifera])

HSP 1 Score: 632.9 bits (1631), Expect = 4.300e-178
Identity = 301/385 (78.18%), Postives = 344/385 (89.35%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDND----MSAWEKAYTDERSWESLQEDESGLL 115
           MN +EHR  ++  GRRL+ +E+E++EDED      + AWE+AY DERSWESLQEDESGLL
Sbjct: 1   MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 60

Query: 116 RPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVV 175
           RPIDN +IYHAQYRRRIRS+ S++T+ARIQKGLIRY+Y+V+D SRAA+EMDFKPSRMAVV
Sbjct: 61  RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 120

Query: 176 AKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQ 235
           AKH+EAF+REFFDQNPLSQIGLV IKDG++ CLTD+GGSP+SH+KALM KLECSGD+SLQ
Sbjct: 121 AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 180

Query: 236 NALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMF 295
           NAL+LVH  LNQIPSYGHREV+ILYSALSTCDPGDIMETIQ+CKKSKIRCS++GLSAE+F
Sbjct: 181 NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 240

Query: 296 ICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSI 355
           IC+H+CQETGGSY++ALDE H KELLLEHAPPPPAIAE+AIANLIKMGFPQRAAEGV+SI
Sbjct: 241 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 300

Query: 356 CVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSF 415
           C CHKEAKVG GYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEVS 
Sbjct: 301 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 360

Query: 416 PNRKIAGQKSYETCFGCMHNLMDPG 437
                  Q+S   CFGC  +L+ PG
Sbjct: 361 SLLNNPHQRSSRACFGCQESLLIPG 385

[Close]

BLAST of Spo20970.1 vs. NCBI nr
Match: gi|802551547|ref|XP_012064858.1| (PREDICTED: general transcription factor IIH subunit 2 [Jatropha curcas])

HSP 1 Score: 609.0 bits (1569), Expect = 6.700e-171
Identity = 292/376 (77.66%), Postives = 336/376 (89.36%), Query Frame = 1


		  
Query: 64  VSNSRGRRLNRD---EDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIY 123
           +SNS  +RLN +   ED+D++D D D+ AWE+ YTDERSWE+LQEDESGLLRPIDN +IY
Sbjct: 1   MSNSEKKRLNGETGEEDDDEDDVDGDLDAWERTYTDERSWEALQEDESGLLRPIDNKAIY 60

Query: 124 HAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVR 183
           HAQYRRR+R++S+T+T+ARIQKGLIR++Y+V+D SRAA EMDFKPSRM V+AKHVEAFVR
Sbjct: 61  HAQYRRRLRALSATATTARIQKGLIRFLYIVVDLSRAAGEMDFKPSRMVVIAKHVEAFVR 120

Query: 184 EFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHEC 243
           EFF QNPLSQIGLV IKDGV+H LT++GGSPESHIKALM KLECSGD+SLQNAL+ V   
Sbjct: 121 EFFYQNPLSQIGLVTIKDGVAHSLTELGGSPESHIKALMGKLECSGDSSLQNALDFVRVY 180

Query: 244 LNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQET 303
           L+QIPSYGHREV+ILYSALSTCDPGDIM+TIQKCKKSKIRCS++GLSAEMFICKH+C+ET
Sbjct: 181 LDQIPSYGHREVLILYSALSTCDPGDIMDTIQKCKKSKIRCSVIGLSAEMFICKHLCRET 240

Query: 304 GGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKV 363
           GG Y++A+DE H KEL+LEHAPPPPAIAE+AIANLIKMGFPQRAAEG VSIC CHKEAKV
Sbjct: 241 GGLYSVAMDEGHFKELILEHAPPPPAIAEFAIANLIKMGFPQRAAEGSVSICSCHKEAKV 300

Query: 364 GAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQK 423
           G GY CP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVS    ++   K
Sbjct: 301 GEGYICPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSLRQNEL-HNK 360

Query: 424 SYETCFGCMHNLMDPG 437
             +TCFGC  NL++PG
Sbjct: 361 LPKTCFGCQQNLVNPG 375

[Close]

BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPZ9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_154630 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 2.900e-221
Identity = 382/384 (99.48%), Postives = 382/384 (99.48%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID
Sbjct: 1   MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 60

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV
Sbjct: 61  NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 120

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE
Sbjct: 121 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 180

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH
Sbjct: 181 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 240

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH
Sbjct: 241 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 300

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK
Sbjct: 301 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 360

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           IAGQKSYETCFGCMHNLMDPG  S
Sbjct: 361 IAGQKSYETCFGCMHNLMDPGTGS 384

[Close]

BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B777_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006170 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 2.900e-205
Identity = 351/384 (91.41%), Postives = 367/384 (95.57%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPID 115
           +NSIEHR V NSRGRRL RDEDEDDEDEDNDMSAWE+AYTDERSWESLQEDESGLLRPID
Sbjct: 2   INSIEHREVRNSRGRRLERDEDEDDEDEDNDMSAWERAYTDERSWESLQEDESGLLRPID 61

Query: 116 NTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHV 175
           N ++YHAQYRRRIRSISSTST+ARIQKGLIRYIYVVMDFSRAA EMDFKPSRMAVVAKHV
Sbjct: 62  NKNLYHAQYRRRIRSISSTSTTARIQKGLIRYIYVVMDFSRAAGEMDFKPSRMAVVAKHV 121

Query: 176 EAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALE 235
           EAFVREFFDQNPLSQIGLV+IKDGV+HCLTDMGGSPESHIKALM KLECSGDASLQNALE
Sbjct: 122 EAFVREFFDQNPLSQIGLVSIKDGVAHCLTDMGGSPESHIKALMNKLECSGDASLQNALE 181

Query: 236 LVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKH 295
           LVHECLNQ+PSYGHREV+ILYSALSTCDPGDIMETI KCKKSKIRCSI+GLSAEMFICKH
Sbjct: 182 LVHECLNQVPSYGHREVLILYSALSTCDPGDIMETINKCKKSKIRCSIVGLSAEMFICKH 241

Query: 296 ICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCH 355
           ICQETGGSY+IALDEFHLKELLLEHAPPPPAIAEYA+ANLIKMGFPQRAAEGVVSICVCH
Sbjct: 242 ICQETGGSYSIALDEFHLKELLLEHAPPPPAIAEYAVANLIKMGFPQRAAEGVVSICVCH 301

Query: 356 KEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRK 415
           KEAKVGAGYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPF+EVS  N  
Sbjct: 302 KEAKVGAGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFNEVSSSNGN 361

Query: 416 IAGQKSYETCFGCMHNLMDPGKHS 440
           I GQ+S ETCFGCMHNL + G  S
Sbjct: 362 IIGQRSLETCFGCMHNLTNSGTGS 385

[Close]

BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: F6GTZ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g03170 PE=4 SV=1)

HSP 1 Score: 632.9 bits (1631), Expect = 3.000e-178
Identity = 301/385 (78.18%), Postives = 344/385 (89.35%), Query Frame = 1


		  
Query: 56  MNSIEHRAVSNSRGRRLNRDEDEDDEDEDND----MSAWEKAYTDERSWESLQEDESGLL 115
           MN +EHR  ++  GRRL+ +E+E++EDED      + AWE+AY DERSWESLQEDESGLL
Sbjct: 1   MNDMEHRKTNDGEGRRLDGEEEEEEEDEDEGNGRGLDAWERAYADERSWESLQEDESGLL 60

Query: 116 RPIDNTSIYHAQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVV 175
           RPIDN +IYHAQYRRRIRS+ S++T+ARIQKGLIRY+Y+V+D SRAA+EMDFKPSRMAVV
Sbjct: 61  RPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYLYIVVDLSRAASEMDFKPSRMAVV 120

Query: 176 AKHVEAFVREFFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQ 235
           AKH+EAF+REFFDQNPLSQIGLV IKDG++ CLTD+GGSP+SH+KALM KLECSGD+SLQ
Sbjct: 121 AKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLGGSPDSHVKALMGKLECSGDSSLQ 180

Query: 236 NALELVHECLNQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMF 295
           NAL+LVH  LNQIPSYGHREV+ILYSALSTCDPGDIMETIQ+CKKSKIRCS++GLSAE+F
Sbjct: 181 NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMETIQECKKSKIRCSVIGLSAEIF 240

Query: 296 ICKHICQETGGSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSI 355
           IC+H+CQETGGSY++ALDE H KELLLEHAPPPPAIAE+AIANLIKMGFPQRAAEGV+SI
Sbjct: 241 ICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISI 300

Query: 356 CVCHKEAKVGAGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSF 415
           C CHKEAKVG GYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEVS 
Sbjct: 301 CSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIPPFDEVSL 360

Query: 416 PNRKIAGQKSYETCFGCMHNLMDPG 437
                  Q+S   CFGC  +L+ PG
Sbjct: 361 SLLNNPHQRSSRACFGCQESLLIPG 385

[Close]

BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A061GUH7_THECC (General transcription factor II H2 isoform 1 OS=Theobroma cacao GN=TCM_041075 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 3.900e-170
Identity = 285/375 (76.00%), Postives = 333/375 (88.80%), Query Frame = 1


		  
Query: 64  VSNSRGRRLNRDEDEDDEDE--DNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYH 123
           ++N   RR+N   +EDD+++  + D+ AWE+ YTDERSWESLQEDESGLLRPIDN ++YH
Sbjct: 1   MNNGGARRMNGGGEEDDDEDYVNGDLDAWERTYTDERSWESLQEDESGLLRPIDNKALYH 60

Query: 124 AQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVRE 183
           +QYRRR+RS+SST+T+ARIQKGLIRY+Y+V+D SRAA+E DF+PSR+ V+AKHVEAF+RE
Sbjct: 61  SQYRRRLRSLSSTATAARIQKGLIRYLYLVIDLSRAASETDFRPSRIVVIAKHVEAFIRE 120

Query: 184 FFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECL 243
           FFDQNPLSQ+GL+ IKDGV+ CLTD+GGSPESHIKALM KLECSGD+SLQNAL+LV   L
Sbjct: 121 FFDQNPLSQVGLLTIKDGVAQCLTDLGGSPESHIKALMNKLECSGDSSLQNALDLVDGYL 180

Query: 244 NQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETG 303
           NQIPSYGHREV+ILY+ALSTCDPGDIMETIQKCKKSKIRCS++GL+AEMFICKH+CQETG
Sbjct: 181 NQIPSYGHREVLILYAALSTCDPGDIMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETG 240

Query: 304 GSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVG 363
           G+Y++ALDE H KEL+LEHAPPPPAIAE+A ANLIKMGFPQRAAEG +SIC CHKEAKVG
Sbjct: 241 GTYSVALDESHFKELILEHAPPPPAIAEFATANLIKMGFPQRAAEGSISICSCHKEAKVG 300

Query: 364 AGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKS 423
           AGYTCP+CKARVCELPTECRICGLTLVSSPHLARSYHHLFPI PFDEV   +      K 
Sbjct: 301 AGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPIAPFDEVPPFSLNDPNHKL 360

Query: 424 YETCFGCMHNLMDPG 437
              CFGC  +L++PG
Sbjct: 361 QRNCFGCQQSLLNPG 375

[Close]

BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Match: A0A0D2S1Q4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G120700 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 6.700e-170
Identity = 283/375 (75.47%), Postives = 334/375 (89.07%), Query Frame = 1


		  
Query: 64  VSNSRGRRLN--RDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYH 123
           ++N  GRR+N   +ED+D++D + D+ AWE+ YTDERSWESLQEDESG+LRPIDN ++YH
Sbjct: 1   MNNGAGRRINGGAEEDDDEDDVNGDLDAWERTYTDERSWESLQEDESGMLRPIDNQALYH 60

Query: 124 AQYRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVRE 183
           +QYRRR+RS+S  ST+ARIQKGLIRY+Y+V+D SRAA+EMDF+PSR+AV+AKHVE F+RE
Sbjct: 61  SQYRRRLRSLS--STAARIQKGLIRYLYIVIDLSRAASEMDFRPSRIAVIAKHVETFIRE 120

Query: 184 FFDQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECL 243
           FF QNPLSQ+G+V IKDGV+HCLTD+GGSPESHI ALMKKLECSGD+SLQNAL+LV   L
Sbjct: 121 FFYQNPLSQVGIVTIKDGVAHCLTDIGGSPESHINALMKKLECSGDSSLQNALDLVDGYL 180

Query: 244 NQIPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETG 303
           NQIPSYGHREV+ILYSALSTCDPGDIM+TIQKC+KSKIRCS++GL+AEMFICKH+CQETG
Sbjct: 181 NQIPSYGHREVLILYSALSTCDPGDIMDTIQKCRKSKIRCSVIGLAAEMFICKHLCQETG 240

Query: 304 GSYAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVG 363
           G+Y++ALDE H KEL+LEHAPPPPAIAE+A+ANLIKMGFPQRAAEG +SIC CHKEAKVG
Sbjct: 241 GTYSVALDESHFKELILEHAPPPPAIAEFAVANLIKMGFPQRAAEGSISICSCHKEAKVG 300

Query: 364 AGYTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKS 423
           AGYTCP+CKAR CELPTEC +CGLTLVSSPHLARSYHHLFPI PFDEV+  +      K 
Sbjct: 301 AGYTCPRCKARACELPTECCVCGLTLVSSPHLARSYHHLFPIAPFDEVTSSHLNNPNCKL 360

Query: 424 YETCFGCMHNLMDPG 437
              CFGC  +L+DPG
Sbjct: 361 QRNCFGCQQSLLDPG 373

[Close]

BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_ARATH (General transcription factor IIH subunit 2 OS=Arabidopsis thaliana GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 2.200e-166
Identity = 279/374 (74.60%), Postives = 328/374 (87.70%), Query Frame = 1


		  
Query: 64  VSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQ 123
           +SN R R  +  E+EDDED +  +  WE+AY D+RSWE LQEDESGLLRPIDN++IYHAQ
Sbjct: 1   MSNQRKRSNDEREEEDDEDAEG-IGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQ 60

Query: 124 YRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFF 183
           YRRR+R +S+ +   RIQKGLIRY+Y+V+DFSRAAAEMDF+PSRMA++AKHVEAF+REFF
Sbjct: 61  YRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFF 120

Query: 184 DQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECLNQ 243
           DQNPLSQIGLV+IK+GV+H LTD+GGSPE+HIKALM KLE  GD+SLQNALELVHE LNQ
Sbjct: 121 DQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQ 180

Query: 244 IPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGS 303
           +PSYGHREV+ILYSAL TCDPGDIMETIQKCKKSK+RCS++GLSAEMFICKH+CQETGG 
Sbjct: 181 VPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGL 240

Query: 304 YAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVGAG 363
           Y++A+DE HLK+LLLEHAPPPPAIAE+AIANLIKMGFPQRAAEG ++IC CHKE K+GAG
Sbjct: 241 YSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAG 300

Query: 364 YTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEV-SFPNRKIAGQKSY 423
           Y CP+CKARVC+LPTEC ICGLTLVSSPHLARSYHHLFPI PFDEV +  +     +K  
Sbjct: 301 YMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLG 360

Query: 424 ETCFGCMHNLMDPG 437
           ++CFGC  +L+  G
Sbjct: 361 KSCFGCQQSLIGAG 373

[Close]

BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_BOVIN (General transcription factor IIH subunit 2 OS=Bos taurus GN=GTF2H2 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.100e-77
Identity = 154/376 (40.96%), Postives = 229/376 (60.90%), Query Frame = 1


		  
Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDESG L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR SI+GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKSLKAAKIRVSIIGLSAEVRVCTALARETGGTYHVILDESHYKELLT 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCHKEAKVG-----AGYTCP 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H ++         GY CP
Sbjct: 242 HHVSPPPA-SSNSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCP 301

Query: 381 KCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCFG 440
           +C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+  P  +  G++    C+ 
Sbjct: 302 QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEI--PLEEHNGER---FCYA 361

Query: 441 CMHNLMDPGKHSYISS 444
           C   L D  +H Y+ S
Sbjct: 362 CQGELKD--QHVYVCS 361

[Close]

BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_HUMAN (General transcription factor IIH subunit 2 OS=Homo sapiens GN=GTF2H2 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.100e-77
Identity = 153/374 (40.91%), Postives = 228/374 (60.96%), Query Frame = 1


		  
Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDESG L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR S++GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLT 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCHKEAKVG-----AGYTCP 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H +          GY CP
Sbjct: 242 HHVSPPPA-SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCP 301

Query: 381 KCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCFG 440
           +C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+  P  +  G++    C+G
Sbjct: 302 QCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEI--PLEEYNGER---FCYG 359

Query: 441 CMHNLMDPGKHSYI 442
           C   L D  +H Y+
Sbjct: 362 CQGELKD--QHVYV 359

[Close]

BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_MOUSE (General transcription factor IIH subunit 2 OS=Mus musculus GN=Gtf2h2 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 3.300e-77
Identity = 152/375 (40.53%), Postives = 226/375 (60.27%), Query Frame = 1


		  
Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDE+G L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDETGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR S++GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLA 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCH------KEAKVGAGYTC 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H      +      GY C
Sbjct: 242 HHVSPPPA-SSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFC 301

Query: 381 PKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCF 440
           P+C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+S     +   K    C+
Sbjct: 302 PQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIS-----LEEYKGERFCY 360

Query: 441 GCMHNLMDPGKHSYI 442
           GC   L D  +H Y+
Sbjct: 362 GCQGELKD--QHVYV 360

[Close]

BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Match: TF2H2_RAT (General transcription factor IIH subunit 2 OS=Rattus norvegicus GN=Gtf2h2 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.300e-77
Identity = 153/375 (40.80%), Postives = 228/375 (60.80%), Query Frame = 1


		  
Query: 81  EDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQYRRRIRSISSTSTSARI 140
           ++E      WE  Y  ER+WE L+EDESG L+      ++ A+ +R            ++
Sbjct: 2   DEEPERTKRWEGGY--ERTWEILKEDESGSLKATIEDILFKAKRKRVFEH------HGQV 61

Query: 141 QKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFFDQNPLSQIGLVAIKDGV 200
           + G++R++YVV+D SR   + D KP+R+    K +E FV E+FDQNP+SQIG++  K   
Sbjct: 62  RLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKR 121

Query: 201 SHCLTDMGGSPESHIKALMKKLE--CSGDASLQNALELVHECLNQIPSYGHREVIILYSA 260
           +  LT++ G+P  HI +L K ++  C G+ SL N+L +  + L  +P +  REV+I++S+
Sbjct: 122 AEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSS 181

Query: 261 LSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGSYAIALDEFHLKELLL 320
           L+TCDP +I + I+  K +KIR S++GLSAE+ +C  + +ETGG+Y + LDE H KELL 
Sbjct: 182 LTTCDPSNIYDLIKTLKTAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDETHYKELLA 241

Query: 321 EHAPPPPAIAEYAIANLIKMGFPQRA------AEGVVSICVCH------KEAKVGAGYTC 380
            H  PPPA +  +  +LI+MGFPQ         +   S  + H      +      GY C
Sbjct: 242 RHVSPPPA-SSGSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNSTEPGLTLGGYFC 301

Query: 381 PKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEVSFPNRKIAGQKSYETCF 440
           P+C+A+ CELP EC+ICGLTLVS+PHLARSYHHLFP+  F E+  P  +  G++    C+
Sbjct: 302 PQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEI--PLEEYKGER---FCY 360

Query: 441 GCMHNLMDPGKHSYI 442
           GC   L D  +H Y+
Sbjct: 362 GCQGELKD--QHVYV 360

[Close]

BLAST of Spo20970.1 vs. TAIR (Arabidopsis)
Match: AT1G05055.1 (general transcription factor II H2)

HSP 1 Score: 586.6 bits (1511), Expect = 1.300e-167
Identity = 279/374 (74.60%), Postives = 328/374 (87.70%), Query Frame = 1


		  
Query: 64  VSNSRGRRLNRDEDEDDEDEDNDMSAWEKAYTDERSWESLQEDESGLLRPIDNTSIYHAQ 123
           +SN R R  +  E+EDDED +  +  WE+AY D+RSWE LQEDESGLLRPIDN++IYHAQ
Sbjct: 1   MSNQRKRSNDEREEEDDEDAEG-IGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQ 60

Query: 124 YRRRIRSISSTSTSARIQKGLIRYIYVVMDFSRAAAEMDFKPSRMAVVAKHVEAFVREFF 183
           YRRR+R +S+ +   RIQKGLIRY+Y+V+DFSRAAAEMDF+PSRMA++AKHVEAF+REFF
Sbjct: 61  YRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFF 120

Query: 184 DQNPLSQIGLVAIKDGVSHCLTDMGGSPESHIKALMKKLECSGDASLQNALELVHECLNQ 243
           DQNPLSQIGLV+IK+GV+H LTD+GGSPE+HIKALM KLE  GD+SLQNALELVHE LNQ
Sbjct: 121 DQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLNQ 180

Query: 244 IPSYGHREVIILYSALSTCDPGDIMETIQKCKKSKIRCSILGLSAEMFICKHICQETGGS 303
           +PSYGHREV+ILYSAL TCDPGDIMETIQKCKKSK+RCS++GLSAEMFICKH+CQETGG 
Sbjct: 181 VPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGL 240

Query: 304 YAIALDEFHLKELLLEHAPPPPAIAEYAIANLIKMGFPQRAAEGVVSICVCHKEAKVGAG 363
           Y++A+DE HLK+LLLEHAPPPPAIAE+AIANLIKMGFPQRAAEG ++IC CHKE K+GAG
Sbjct: 241 YSVAVDEVHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAG 300

Query: 364 YTCPKCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITPFDEV-SFPNRKIAGQKSY 423
           Y CP+CKARVC+LPTEC ICGLTLVSSPHLARSYHHLFPI PFDEV +  +     +K  
Sbjct: 301 YMCPRCKARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLG 360

Query: 424 ETCFGCMHNLMDPG 437
           ++CFGC  +L+  G
Sbjct: 361 KSCFGCQQSLIGAG 373

The following BLAST results are available for this feature:

BLAST of Spo20970.1 vs. NCBI nr
BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
BLAST of Spo20970.1 vs. TAIR (Arabidopsis)

BLAST of Spo20970.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902179308\|gb\|KNA09327.1\|	4.1e-221	99.4	hypothetical protein SOVF_1546...	[more]
gi\|731374647\|ref\|XP_010667027.1\|	4.2e-205	91.4	PREDICTED: general transcripti...	[more]
gi\|297746227\|emb\|CBI16283.3\|	4.3e-178	78.1	unnamed protein product [Vitis...	[more]
gi\|225435253\|ref\|XP_002284994.1\|	4.3e-178	78.1	PREDICTED: general transcripti...	[more]
gi\|802551547\|ref\|XP_012064858.1\|	6.7e-171	77.6	PREDICTED: general transcripti...	[more]

BLAST of Spo20970.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QPZ9_SPIOL	2.9e-221	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8B777_BETVU	2.9e-205	91.4	Uncharacterized protein OS=Bet...	[more]
F6GTZ1_VITVI	3.0e-178	78.1	Putative uncharacterized prote...	[more]
A0A061GUH7_THECC	3.9e-170	76.0	General transcription factor I...	[more]
A0A0D2S1Q4_GOSRA	6.7e-170	75.4	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo20970.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TF2H2_ARATH	2.2e-166	74.6	General transcription factor I...	[more]
TF2H2_BOVIN	1.1e-77	40.9	General transcription factor I...	[more]
TF2H2_HUMAN	1.1e-77	40.9	General transcription factor I...	[more]
TF2H2_MOUSE	3.3e-77	40.5	General transcription factor I...	[more]
TF2H2_RAT	4.3e-77	40.8	General transcription factor I...	[more]

BLAST of Spo20970.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G05055.1	1.3e-167	74.6	general transcription factor I...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 145..321 score: 3.
IPR002035	von Willebrand factor, type A	PROFILE	PS50234	VWFA	coord: 147..287 score: 9
IPR002035	von Willebrand factor, type A	unknown	SSF53300	vWA-like	coord: 143..312 score: 3.06
IPR007198	Ssl1-like	PFAM	PF04056	Ssl1	coord: 151..341 score: 2.6
IPR012170	TFIIH subunit Ssl1/p44	PIR	PIRSF015919	TFIIH_SSL1	coord: 50..445 score: 5.5E
IPR012170	TFIIH subunit Ssl1/p44	PANTHER	PTHR12695:SF2	GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2	coord: 51..432 score: 2.0E
IPR012170	TFIIH subunit Ssl1/p44	TIGRFAMs	TIGR00622	TIGR00622	coord: 363..436 score: 2.5
None	No IPR available	PANTHER	PTHR12695	GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2	coord: 51..432 score: 2.0E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
cellular_component	GO:0000439	core TFIIH complex
cellular_component	GO:0005675	holo TFIIH complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0008270	zinc ion binding