Spo21002.1 (mRNA)

Overview
NameSpo21002.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionNudC domain-containing protein, putative
Locationchr1 : 42357411 .. 42360730 (+)
Sequence length674
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGGGAAGTGTATTCGGCAAATTTTCCTAATTGCCCAAAATAGTCGGGTGATTGAACTCATTTTATACTTTATAGTATTCTCACAATCTCACTTGGTCCCCCGTCCTCTCCATCGGGAATAATCTGGAAGTTCATATTATAGCCCGGAAACGCCCAAATAACACTTCACCACTTCGCCGGAACCCTAATTTCCGAAATATTCATGGCCGAAAAATTGGCTCCCGATAAGCGCCATGTCTTTGTTCACAACGGTATCCCTTTACCCCTCTTTGTTTCTTGTGAATTCGATCGACTGATTAGTTTGATTGCAAATTTTGACTTTCAATTGGATTTTCCCAATTTATCAGGTCAGAAGGTGTTTGAATGGGATCAAACCCTAGATGAGGTTAACATGTACATAACATTACCTCCAAATGTGCCTACAAAGCAATTTTTTAGCAAAATTCAGTCTAAGCATGTCGAAGTTGGGATTAAAGGCAATCCTCCTTATCTTAATGTTAGTATTTGCATAAAGTTGTTATTTTTAGTTGATTTATCATTTCCTATTTTTCCAGATGGAAATGCTTATTTGATTGTTGATGATGTAATTTTGTTGTGGTTTTTCAGCATGATTTGGAGCATCCTGTGAAGACTGACTCCTCTTTCTGGACTTTGGGTAAGTTTTCGTTCTGTAAGCAGTTTTCTAGATTGTGAAATTGTATGCCAAGTGAATTGAATCATATAGTTAAGGAATTCATCAAATTGGTTATAAAAATGGTACTCTGAACAGTCTAAACACTCGACATTAGAAGTGGCTAATACAAAAGAAAACGTAAAATACTCGTATATGAGTTAATGTGTGGTTGCAAGTGGTGTTATGGACTTGTTCAGGGCTTGGTCGGCGATTCACTTTGTGTGAAAGCCACCTTAGGACTTAGGTAGATTCCCTTCTCTTATGTTTTCAAATTTCAACTGTGTCATAACCTTGTTTATAAATTGATGTCAAAGTACGTCATGCTTAAAAAGTCCAGAGGATCGTTCTTGCTGAACTATGTTATTTGTGCTTAGTTCTATGGAAACATGTAGTTACATGTATGCAGCTGGGTTTGGCTTTCTTGTGAGATGTGCAGTGTTATTGGTTTAATCAGTGTAGTGTCTTGTTTTGTTGTCTGATTGCTGGATGATACGTTGTTCGTAGATGTTGAACTATCTTTTTGAATGTCAGAGGACGATACGATGCATATAACCTTGCAAAAGAGGGAGAAAGGCCTAACATGGTCTTCACCTATCGTTGGTCAAGGTCAGCTGGATGCTTATGCTGCAGATCAAGAGCAGAAGCGCTTGATGCTCCAGCGTTTTCAAGAAGAGGTAATTTGTTATCATTGTATTCTTTTTTCAAATTGTAGACTTGTAGTATCTGCTACAGTTATGCATATCTAGTTGTGCTTCATTAATAGAGGTTATCAGGTAAAGTTTCACTAAGGACATGCTTGGATTGAGGGTAATGTATTAAAGGGGTAATAAAAGTCAAACTAAGGTAATTGAAGGTGATGACGAGGGATGAAGTGGTGGCAAAGGAAACAAGCTAGTGTTGGCAAGAGGAAAATAAAAGTGAAGGAGGAACAAATACCTCATCATGGGGGGAGTAGTTACCCACCATCCCACTAGGGTGATTATTACCCTCATTTGGGGGTAATTACTTCCCCCCTTCCTCCCTTCTCCTCACAACACCACCACTACCACAACTTCTCATCACAATACCACCACACCACCCTCCTTGCAACCACCTCAATTCACCTTCATTGTCCTTTTATTATGGTGGTTTGACTTTTATTACCTCCATAATCCATTACACCCAATCCAAGCGTGCCCTAAGTGGAAATTCTTGCGATAATCTAAAATAAGAAATATTTTGGAAAGTGGAAACCTATCCATTGGAATAGCAATACGATTTGTCTTGCCAGAAAATGAAAAAACAATAGTGGCAAATCTCAATTTATTTTTGGGTTTTGCTTAAAGAGTTCTTTGTGCTTTCGTCAGGTGAAAATATTTAGAAACTAATTGGCAATGCTGTTTTTAGGGTGATCGTTTGCTTCATTGCTTGTTTATATCTTGATTGTTGTTCAGTTATCATTTTAAAAAAAAATTTGTTTGTTTTATTGGGGTGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGCGAGTAATTGATATGGCTGATAAGGTAGTTAAACAAAATATTTTAGCTATAATGCGTTATCGTTTCATGATTAGGAGCCCTGGCAATCAACTTATTGACATGTCCTTCATTGGGGGTGTAGACCTCTTCATTCTTCAATGTTTTTTCTAATGTTTTATGCAGTTGGACAATTCAAAATTTGTTACATCTCTATATCATGCTTTAAGACACGTCTTGATCAATCCAACAGTGAACATTTGATTGAAAGGGCACTGAGATGGATGATATATTTGATACTGGCTTGTCTTCTATGTAAGTGGATGGAGAATTCACGATCAAGATCAAACAAGTTGGACCTAACTTCAGAACTTTCATCCCTAGCAATTGACACCAACATGTGAGACGAACACACCAAATTGTTCCATCTGTTGGTTTGAGGACCTAATCAAGTAATCATATATTTTGATGTTTGAACTGAGCTGGCATGTTTTGAAACATGGAGTTAGGACAAATTCTATGACATAGCTAAGCAATCTTTCGGGTCATTAGAATAATGGGTATTATATAGAATCCTAGGAAGCTCAAGTTGAAATCCGCCTCTGTAGTTCTACCTTTTGGCTTCAGTTCCCTGTTTCTTTACCCCTGAGTAGAAAGCCTTGGTATATACAGATTATTGCTCTATCCTGTTGAGATTTGTTGGGCTTTGGTTGAATTGGAGTGGTTATAATTGCTTTTGGGTTAATGTCTCATGTCACCTTTTTGGCTGGAGTATTTGTTACTTGCCACAAAACAGTCATGCTCCTATATTCCCTGATAGGAACAGGTTATTTGCATCCAAGGCCGCTGCTTGAAAACATCTTTGATCTTTTCACACTAGGTATAATAGTGTGATTATCTGTTCTGATTGTTTTGCTGTGTCGTGGGACTTTCAAATGCTTTGTTTATGTATGCCCTGTCTGATGCAGCTGCTCGATTTGTCCATATATTTCAGTTTACTTATAATTGGATAATTAGTTGTGAGGTGTGGTCCATGGTGCATCAACTTTTCAACCGTCTTAAGTACTTGCTTTTTTTCTCGCAGAACCCTGGTTTTGACTTCTCGCAAGCAGATTTCAGTGGAAACTGTCCAGATCCAAGAACCTTCATGGGCGGAATTCGCTAG

mRNA sequence

AGAGGGAAGTGTATTCGGCAAATTTTCCTAATTGCCCAAAATAGTCGGGTGATTGAACTCATTTTATACTTTATAGTATTCTCACAATCTCACTTGGTCCCCCGTCCTCTCCATCGGGAATAATCTGGAAGTTCATATTATAGCCCGGAAACGCCCAAATAACACTTCACCACTTCGCCGGAACCCTAATTTCCGAAATATTCATGGCCGAAAAATTGGCTCCCGATAAGCGCCATGTCTTTGTTCACAACGGTCAGAAGGTGTTTGAATGGGATCAAACCCTAGATGAGGTTAACATGTACATAACATTACCTCCAAATGTGCCTACAAAGCAATTTTTTAGCAAAATTCAGTCTAAGCATGTCGAAGTTGGGATTAAAGGCAATCCTCCTTATCTTAATCATGATTTGGAGCATCCTGTGAAGACTGACTCCTCTTTCTGGACTTTGGAGGACGATACGATGCATATAACCTTGCAAAAGAGGGAGAAAGGCCTAACATGGTCTTCACCTATCGTTGGTCAAGGTCAGCTGGATGCTTATGCTGCAGATCAAGAGCAGAAGCGCTTGATGCTCCAGCGTTTTCAAGAAGAGAACCCTGGTTTTGACTTCTCGCAAGCAGATTTCAGTGGAAACTGTCCAGATCCAAGAACCTTCATGGGCGGAATTCGCTAG

Coding sequence (CDS)

ATGGCCGAAAAATTGGCTCCCGATAAGCGCCATGTCTTTGTTCACAACGGTCAGAAGGTGTTTGAATGGGATCAAACCCTAGATGAGGTTAACATGTACATAACATTACCTCCAAATGTGCCTACAAAGCAATTTTTTAGCAAAATTCAGTCTAAGCATGTCGAAGTTGGGATTAAAGGCAATCCTCCTTATCTTAATCATGATTTGGAGCATCCTGTGAAGACTGACTCCTCTTTCTGGACTTTGGAGGACGATACGATGCATATAACCTTGCAAAAGAGGGAGAAAGGCCTAACATGGTCTTCACCTATCGTTGGTCAAGGTCAGCTGGATGCTTATGCTGCAGATCAAGAGCAGAAGCGCTTGATGCTCCAGCGTTTTCAAGAAGAGAACCCTGGTTTTGACTTCTCGCAAGCAGATTTCAGTGGAAACTGTCCAGATCCAAGAACCTTCATGGGCGGAATTCGCTAG

Protein sequence

MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo21002Spo21002gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo21002.1Spo21002.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo21002.1.exon.1Spo21002.1.exon.1exon
Spo21002.1.exon.2Spo21002.1.exon.2exon
Spo21002.1.exon.3Spo21002.1.exon.3exon
Spo21002.1.exon.4Spo21002.1.exon.4exon
Spo21002.1.exon.5Spo21002.1.exon.5exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo21002.1.utr5p.1Spo21002.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo21002.1.CDS.1Spo21002.1.CDS.1CDS
Spo21002.1.CDS.2Spo21002.1.CDS.2CDS
Spo21002.1.CDS.3Spo21002.1.CDS.3CDS
Spo21002.1.CDS.4Spo21002.1.CDS.4CDS
Spo21002.1.CDS.5Spo21002.1.CDS.5CDS


Homology
[Close]
BLAST of Spo21002.1 vs. NCBI nr
Match: gi|902240181|gb|KNA25916.1| (hypothetical protein SOVF_002380 [Spinacia oleracea])

HSP 1 Score: 334.3 bits (856), Expect = 1.100e-88
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG
Sbjct: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK
Sbjct: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. NCBI nr
Match: gi|731348579|ref|XP_010685559.1| (PREDICTED: nudC domain-containing protein 2 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 305.1 bits (780), Expect = 7.200e-80
Identity = 141/156 (90.38%), Postives = 147/156 (94.23%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MA+KLAPDK H FVHNGQKVFEWDQTLDEVNMYI LPPNVPTKQF+SKIQSKHVEVGIKG
Sbjct: 1   MADKLAPDKLHAFVHNGQKVFEWDQTLDEVNMYIALPPNVPTKQFYSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYL+HDL+HPVKTDSSFWTLEDDTMHITLQKR+KG TWSSPIVGQGQLD   AD EQK
Sbjct: 61  NPPYLSHDLQHPVKTDSSFWTLEDDTMHITLQKRDKGQTWSSPIVGQGQLDPLNADLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSG+CPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGDCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. NCBI nr
Match: gi|351723663|ref|NP_001236519.1| (uncharacterized protein LOC100306544 [Glycine max])

HSP 1 Score: 296.2 bits (757), Expect = 3.300e-77
Identity = 136/156 (87.18%), Postives = 145/156 (92.95%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. NCBI nr
Match: gi|1012364928|gb|KYP76110.1| (NudC domain-containing protein 2 [Cajanus cajan])

HSP 1 Score: 294.7 bits (753), Expect = 9.700e-77
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+G+GQLDAY+ D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGEGQLDAYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA F+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. NCBI nr
Match: gi|747055869|ref|XP_011074183.1| (PREDICTED: nudC domain-containing protein 2 [Sesamum indicum])

HSP 1 Score: 294.3 bits (752), Expect = 1.300e-76
Identity = 136/156 (87.18%), Postives = 142/156 (91.03%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH F+HNGQKVFEWDQTL+EVNMYITLPPNVP K F  KI SKHVEVGIKG
Sbjct: 1   MAEKLAPEKRHSFMHNGQKVFEWDQTLEEVNMYITLPPNVPKKLFCCKIDSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL HPVKTDSSFWTLEDD MHITLQKR+KG TWSSPI+GQGQLD Y  D EQK
Sbjct: 61  NPPYLNHDLMHPVKTDSSFWTLEDDIMHITLQKRDKGQTWSSPIMGQGQLDPYTTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSG+CPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGSCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2D9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_002380 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 7.700e-89
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG
Sbjct: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK
Sbjct: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVD2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g172190 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.000e-80
Identity = 141/156 (90.38%), Postives = 147/156 (94.23%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MA+KLAPDK H FVHNGQKVFEWDQTLDEVNMYI LPPNVPTKQF+SKIQSKHVEVGIKG
Sbjct: 1   MADKLAPDKLHAFVHNGQKVFEWDQTLDEVNMYIALPPNVPTKQFYSKIQSKHVEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYL+HDL+HPVKTDSSFWTLEDDTMHITLQKR+KG TWSSPIVGQGQLD   AD EQK
Sbjct: 61  NPPYLSHDLQHPVKTDSSFWTLEDDTMHITLQKRDKGQTWSSPIVGQGQLDPLNADLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSG+CPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGDCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: C6SZU0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G063100 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.300e-77
Identity = 136/156 (87.18%), Postives = 145/156 (92.95%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A151U9W1_CAJCA (NudC domain-containing protein 2 OS=Cajanus cajan GN=KK1_020334 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.800e-77
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YITLPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYITLPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+G+GQLDAY+ D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGEGQLDAYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA F+GNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PF32_GLYSO (NudC domain-containing protein 2 OS=Glycine soja GN=glysoja_030299 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 8.900e-77
Identity = 135/156 (86.54%), Postives = 144/156 (92.31%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH FVHNGQKVFEWDQTLDEVN+YI LPPNV +KQF+ KIQSKH+E+GIKG
Sbjct: 1   MAEKLAPEKRHSFVHNGQKVFEWDQTLDEVNIYIALPPNVHSKQFYCKIQSKHLELGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTDSSFWTLEDD MHITLQKR+KG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLTSPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC2_HUMAN (NudC domain-containing protein 2 OS=Homo sapiens GN=NUDCD2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-17
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1 

		  

Query: 22  EWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWT 81
           +W QTL+EV + + +PP    +     +QS+HV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDTMH---ITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KR+    W+S +  +   D +  DQ Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 ADFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144
[Close]
BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC2_MOUSE (NudC domain-containing protein 2 OS=Mus musculus GN=Nudcd2 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-17
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1 

		  

Query: 22  EWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWT 81
           +W QTL+EV + + +PP    +     +QS+HV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDTMH---ITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KR+    W+S +  +   D +  DQ Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 ADFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144
[Close]
BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC2_RAT (NudC domain-containing protein 2 OS=Rattus norvegicus GN=Nudcd2 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.700e-17
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 1 

		  

Query: 22  EWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFWT 81
           +W QTL+EV + + +PP    +     +QS+HV + + G    L   L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGRE-ILKGKLFDSTIADEGTWT 79

Query: 82  LEDDTMH---ITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KR+    W+S +  +   D +  DQ Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 ADFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144
[Close]
BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: NUDC1_DANRE (NudC domain-containing protein 1 OS=Danio rerio GN=nudcd1 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.300e-9
Identity = 35/121 (28.93%), Postives = 60/121 (49.59%), Query Frame = 1 

		  

Query: 7   PDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLN 66
           P  + + V N   ++ W QT ++V + + LP          K+    + V +    P L+
Sbjct: 267 PPVQDMEVGNSDPIYFWQQTEEDVTLCVRLPEGTTKDDIRFKLTVDCLRVRVGDYAPLLD 326

Query: 67  HDLEHPVKTDSSFWTLEDD-TMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQKRLMLQ 126
             L  PV  ++S WT+ DD ++ ++LQKR +G  WS  ++G  +   Y  + EQK  + Q
Sbjct: 327 GQLFAPVDPEASTWTMNDDKSLEVSLQKRSEGPLWSEVVLGD-RRGEYLMNDEQKSQLQQ 386
[Close]
BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Match: BOB1_ARATH (Protein BOBBER 1 OS=Arabidopsis thaliana GN=BOB1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.000e-9
Identity = 38/158 (24.05%), Postives = 66/158 (41.77%), Query Frame = 1 

		  

Query: 21  FEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFW 80
           + W Q L EV + I +P     +    +I+   ++VG+KG  P ++ +L   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-TMHITLQKREKGLTWSSPIVGQGQLDAYAADQE--------------------- 140
            +ED   + I L K ++   W   + G+ ++D    + E                     
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 --------------QKRLMLQRFQEENPGFDFSQADFS 143
                         QK+ +L++F  E+P  DFS A F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304
[Close]
BLAST of Spo21002.1 vs. TAIR (Arabidopsis)
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 290.8 bits (743), Expect = 5.000e-79
Identity = 134/156 (85.90%), Postives = 141/156 (90.38%), Query Frame = 1 

		  

Query: 1   MAEKLAPDKRHVFVHNGQKVFEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKG 60
           MAEKLAP+KRH F+HNGQKVFEWDQTL+EVNMYITLPPNV  K F  KIQSKH+EVGIKG
Sbjct: 1   MAEKLAPEKRHDFIHNGQKVFEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKG 60

Query: 61  NPPYLNHDLEHPVKTDSSFWTLEDDTMHITLQKREKGLTWSSPIVGQGQLDAYAADQEQK 120
           NPPYLNHDL  PVKTD SFWTLEDD MHITLQKREKG TW+SPI+GQGQLD YA D EQK
Sbjct: 61  NPPYLNHDLSAPVKTDCSFWTLEDDIMHITLQKREKGQTWASPILGQGQLDPYATDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQADFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQA FSGNCPDPR+FMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRSFMGGIR 156
[Close]
BLAST of Spo21002.1 vs. TAIR (Arabidopsis)
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-10
Identity = 38/158 (24.05%), Postives = 66/158 (41.77%), Query Frame = 1 

		  

Query: 21  FEWDQTLDEVNMYITLPPNVPTKQFFSKIQSKHVEVGIKGNPPYLNHDLEHPVKTDSSFW 80
           + W Q L EV + I +P     +    +I+   ++VG+KG  P ++ +L   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-TMHITLQKREKGLTWSSPIVGQGQLDAYAADQE--------------------- 140
            +ED   + I L K ++   W   + G+ ++D    + E                     
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 --------------QKRLMLQRFQEENPGFDFSQADFS 143
                         QK+ +L++F  E+P  DFS A F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304
The following BLAST results are available for this feature:
BLAST of Spo21002.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902240181|gb|KNA25916.1|1.1e-88100.hypothetical protein SOVF_0023... [more]
gi|731348579|ref|XP_010685559.1|7.2e-8090.3PREDICTED: nudC domain-contain... [more]
gi|351723663|ref|NP_001236519.1|3.3e-7787.1uncharacterized protein LOC100... [more]
gi|1012364928|gb|KYP76110.1|9.7e-7785.9NudC domain-containing protein... [more]
gi|747055869|ref|XP_011074183.1|1.3e-7687.1PREDICTED: nudC domain-contain... [more]
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BLAST of Spo21002.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2D9_SPIOL7.7e-89100.Uncharacterized protein OS=Spi... [more]
A0A0J8BVD2_BETVU5.0e-8090.3Uncharacterized protein OS=Bet... [more]
C6SZU0_SOYBN2.3e-7787.1Uncharacterized protein OS=Gly... [more]
A0A151U9W1_CAJCA6.8e-7785.9NudC domain-containing protein... [more]
A0A0B2PF32_GLYSO8.9e-7786.5NudC domain-containing protein... [more]
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BLAST of Spo21002.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
NUDC2_HUMAN8.7e-1738.1NudC domain-containing protein... [more]
NUDC2_MOUSE8.7e-1738.1NudC domain-containing protein... [more]
NUDC2_RAT8.7e-1738.1NudC domain-containing protein... [more]
NUDC1_DANRE2.3e-928.9NudC domain-containing protein... [more]
BOB1_ARATH3.0e-924.0Protein BOBBER 1 OS=Arabidopsi... [more]
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BLAST of Spo21002.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G58740.15.0e-7985.9HSP20-like chaperones superfam... [more]
AT5G53400.11.7e-1024.0HSP20-like chaperones superfam... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 21..93
score: 6.2
IPR007052CS domainPROFILEPS51203CScoord: 16..104
score: 16
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 19..149
score: 3.2
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 20..135
score: 1.55
NoneNo IPR availablePANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 1..156
score: 3.4
NoneNo IPR availablePANTHERPTHR12356:SF18NUDC DOMAIN-CONTAINING PROTEIN 2coord: 1..156
score: 3.4

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm