Spo21186.1 (mRNA) | SpinachBase

Overview


Name	Spo21186.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	60S ribosomal protein L13a-3
Location	SpoScf_01238 : 160406 .. 162826 (+)
Sequence length	1329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAAAGAAAATAATTTTTATAACTCTAGTTGGGTTTAAAAAGCCCAACCATCACAACCCAAAACAACACAGCAACCCTCCTTCATTTTCCCTAAATATTCAGCCACATATAAATACCTTGCAAACCCTAAAATCCTAAAGCCCTCTTTACATTTTCGCTGCTTCCGACTGAGAGGAGAGAGAAAAACTCAGAGAGTAAAAATGGTGTCTGGTTCAGGAATCATGGCGAAGAGGGTAGTCGTCGACGCCCGCCACCATATGTTGGGCCGTCTAGCCTCCATTGTTGCCAAGGAGCTTCTCACTGGCCAGCGAGTTGTGGTGGTTCGTTGTGAAGAGATCGCTCTTTCCGGTGGTCTAGTTAGGCAGAAGATGAAGTATCTTCGCTTTCTCCGCAAGAGGATGAACACCAAGCCTTCTCACGGCCCCATTCATTTCCGCGCCCCTTCAAAGATCTTCTGGCGTACCGTTAGAGGGTATACTTTCTCTTTCCTCTATATTTTCCTGTTTATTTTGATATTAGGATTTTGTATGCTTCGATCTAGTTAATTTTAGGTTTTCCTTGGTTGTTTTTTTGGTGATAGATAGTTAATTTAAAGGGCAATGCATCAAAATTGTGGATTTTTCACCTAATTTGTGTTTCAGAATTGCACTGTCATTTCCCCCTTTTTAATTGAAGTATGATATGTTAAAAAAAGCATTATTCAATGTTTAGCCGTTTCGGTGAAACTATTAAAACTCGAATGTTGATTTATAATATCAAATGAATATTCAATCGAAATGCTGTACCGAACTGCTGATGGGATGTTTGAGTAAAAACTCGAAATTTGAAGTTTTTGCTTGCTTTCATCTTCGTCTACTACAAGAAATATAAACAATTAATAATTTAACTAGTCTTCTACGTGCTTATATTCTTCAGCAAGTACTAATTTAACTGTTTTTATGTAGTATGGTTCCTTAATTATGGAAATGTTTATGTGCAGTATGATTCCTCACAAGACCAAGAGAGGAGCTGCTGCATTAGCAAGGTTGAAGGTGTACGAGGGTGTTCCCCCACCATACGACAAAATCAAGAGGGTGGTTGTTCCTGATGCTCTCAAGTGAGTTGGGTTTTTTTCCAGATGTTCCGATCATCGTTAATTATGTTGCCCTGTGGGTTTTCTATGTGAGAATGTATGTTTCAGATAATATTATATTGGGAATAAGTGATAATTTTTTTGGTTAATGCAGGGTGTTGAGGCTTCAAAAGGGCCACAAGTACTGCTTGCTCGGCCGTCTATCCAAGGAAGTCGGGTGGAACCATTACGACACCATCAGGGTATGTATATCCTTGTTTTTTGTTTGTACTCTGTAGTAGATAGTAACTTGTAGCTGAGCTTTGTTTAAATAATCGTGATATTCTTCATAATAAGTGGAATATGTGAATGTGTTTTGTTTCCTACCCTGTAGATATTAAATTCTACTTCGTATATGAAAAAAGCTGAATTGATTATGTGTTATAGCTTATGCTTAGATATTTTAGAAATCCACTGTATCTGTGAATATGATCCTATTTGAATATACATCTTTTTGGTGAAAGAGTTAATTGATTTTTGAACTTGTTTATTTATATGTCCAATTAATCAACTGGGAAGTCTGGGTTTACTACATGAATCTAAACTATACTACATGAACCTGTCCAATACTCACTTGCTGAACTAGAATATAGTAGTCTAGCAGAACCTTGTTAGAAACTTATCCTAATTTTGAGCTAATCATTTTCTTGACTTGCAGGAACTCGAGGAGAAGCGAAAGGAAAGATCAAAGGTAGTCTACGAGAGGAAGAAGCAGCTCATCAAATTGAAGGCGAAGGCTGAGAAGGCTGTGGAGGAGAAGCTTGGATCTCAGCTAGAAATTCTTGCCCCAGTCAAGTACTGATGATAGGAGTTTTTTGCCCCGGTTTTGTTTATTCTAGACAAGTAGAGTTTTGTTTTATGGTCTGCTACTTTGTGCACTCAAGTCATCATCTATGCTATACTTTTACCCTAGCTTTCGTTTGCATTGGAATTAATTTTAAAATTTTGTTGGGCCTTTGCGATGGATCTACATATATGTGATTTGCTCATGGAGTTTTGGCATCTTTTCAATTAGCACATCATGTTGTTTCTGCACCTCTCAAAGCGTTTAAACCATTTTCATTTGTTGCACTTGGAGTTGTGATTTGATGTTCTATAATTTTGTTGTTGGCCGGATGGTAGCGATTCCTTAATCTCATTGGCCATGTTTGGTAAAAGTATTTTGACGAGTGTGTAGCAGTTTGTGGCCAATTTAGAGGTTTGACAAGTTGAATTCCTTGTTTGTTTGGACTTTGGAAGATGGTTTCAGCGTTTCAAGATAAGGATTGTATTACCCACCAAATCAATCAATTTAAATCTTAGGGCC

mRNA sequence

AAGAAAAAAGAAAATAATTTTTATAACTCTAGTTGGGTTTAAAAAGCCCAACCATCACAACCCAAAACAACACAGCAACCCTCCTTCATTTTCCCTAAATATTCAGCCACATATAAATACCTTGCAAACCCTAAAATCCTAAAGCCCTCTTTACATTTTCGCTGCTTCCGACTGAGAGGAGAGAGAAAAACTCAGAGAGTAAAAATGGTGTCTGGTTCAGGAATCATGGCGAAGAGGGTAGTCGTCGACGCCCGCCACCATATGTTGGGCCGTCTAGCCTCCATTGTTGCCAAGGAGCTTCTCACTGGCCAGCGAGTTGTGGTGGTTCGTTGTGAAGAGATCGCTCTTTCCGGTGGTCTAGTTAGGCAGAAGATGAAGTATCTTCGCTTTCTCCGCAAGAGGATGAACACCAAGCCTTCTCACGGCCCCATTCATTTCCGCGCCCCTTCAAAGATCTTCTGGCGTACCGTTAGAGGTATGATTCCTCACAAGACCAAGAGAGGAGCTGCTGCATTAGCAAGGTTGAAGGTGTACGAGGGTGTTCCCCCACCATACGACAAAATCAAGAGGGTGGTTGTTCCTGATGCTCTCAAGGTGTTGAGGCTTCAAAAGGGCCACAAGTACTGCTTGCTCGGCCGTCTATCCAAGGAAGTCGGGTGGAACCATTACGACACCATCAGGGAACTCGAGGAGAAGCGAAAGGAAAGATCAAAGGTAGTCTACGAGAGGAAGAAGCAGCTCATCAAATTGAAGGCGAAGGCTGAGAAGGCTGTGGAGGAGAAGCTTGGATCTCAGCTAGAAATTCTTGCCCCAGTCAAGTACTGATGATAGGAGTTTTTTGCCCCGGTTTTGTTTATTCTAGACAAGTAGAGTTTTGTTTTATGGTCTGCTACTTTGTGCACTCAAGTCATCATCTATGCTATACTTTTACCCTAGCTTTCGTTTGCATTGGAATTAATTTTAAAATTTTGTTGGGCCTTTGCGATGGATCTACATATATGTGATTTGCTCATGGAGTTTTGGCATCTTTTCAATTAGCACATCATGTTGTTTCTGCACCTCTCAAAGCGTTTAAACCATTTTCATTTGTTGCACTTGGAGTTGTGATTTGATGTTCTATAATTTTGTTGTTGGCCGGATGGTAGCGATTCCTTAATCTCATTGGCCATGTTTGGTAAAAGTATTTTGACGAGTGTGTAGCAGTTTGTGGCCAATTTAGAGGTTTGACAAGTTGAATTCCTTGTTTGTTTGGACTTTGGAAGATGGTTTCAGCGTTTCAAGATAAGGATTGTATTACCCACCAAATCAATCAATTTAAATCTTAGGGCC

Coding sequence (CDS)

ATGGTGTCTGGTTCAGGAATCATGGCGAAGAGGGTAGTCGTCGACGCCCGCCACCATATGTTGGGCCGTCTAGCCTCCATTGTTGCCAAGGAGCTTCTCACTGGCCAGCGAGTTGTGGTGGTTCGTTGTGAAGAGATCGCTCTTTCCGGTGGTCTAGTTAGGCAGAAGATGAAGTATCTTCGCTTTCTCCGCAAGAGGATGAACACCAAGCCTTCTCACGGCCCCATTCATTTCCGCGCCCCTTCAAAGATCTTCTGGCGTACCGTTAGAGGTATGATTCCTCACAAGACCAAGAGAGGAGCTGCTGCATTAGCAAGGTTGAAGGTGTACGAGGGTGTTCCCCCACCATACGACAAAATCAAGAGGGTGGTTGTTCCTGATGCTCTCAAGGTGTTGAGGCTTCAAAAGGGCCACAAGTACTGCTTGCTCGGCCGTCTATCCAAGGAAGTCGGGTGGAACCATTACGACACCATCAGGGAACTCGAGGAGAAGCGAAAGGAAAGATCAAAGGTAGTCTACGAGAGGAAGAAGCAGCTCATCAAATTGAAGGCGAAGGCTGAGAAGGCTGTGGAGGAGAAGCTTGGATCTCAGCTAGAAATTCTTGCCCCAGTCAAGTACTGA

Protein sequence

MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLIKLKAKAEKAVEEKLGSQLEILAPVKY

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo21186	Spo21186	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo21186.1	Spo21186.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21186.1.exon.1	Spo21186.1.exon.1	exon
Spo21186.1.exon.2	Spo21186.1.exon.2	exon
Spo21186.1.exon.3	Spo21186.1.exon.3	exon
Spo21186.1.exon.4	Spo21186.1.exon.4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21186.1.utr5p.1	Spo21186.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21186.1.CDS.1	Spo21186.1.CDS.1	CDS
Spo21186.1.CDS.2	Spo21186.1.CDS.2	CDS
Spo21186.1.CDS.3	Spo21186.1.CDS.3	CDS
Spo21186.1.CDS.4	Spo21186.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21186.1.utr3p.1	Spo21186.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo21186.1 vs. NCBI nr
Match: gi|902180030|gb|KNA09457.1| (hypothetical protein SOVF_153350 [Spinacia oleracea])

HSP 1 Score: 398.7 bits (1023), Expect = 6.300e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL
Sbjct: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KLKAKAEKAVEEKLGSQLEILAPVKY
Sbjct: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. NCBI nr
Match: gi|731347477|ref|XP_010685006.1| (PREDICTED: 60S ribosomal protein L13a-2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 381.3 bits (978), Expect = 1.000e-102
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSG+MAKRVVVDARHHM GRLASIVAKELLTGQRVVV RCE IALSGGLVRQKMKYL
Sbjct: 1   MVSGSGVMAKRVVVDARHHMCGRLASIVAKELLTGQRVVVTRCEAIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSK VYERKKQL 
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKAVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           +L+ KAEK  EEKLGSQLEILAPVKY
Sbjct: 181 RLRVKAEKTAEEKLGSQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. NCBI nr
Match: gi|685353213|ref|XP_009111853.1| (PREDICTED: 60S ribosomal protein L13a-4 [Brassica rapa])

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. NCBI nr
Match: gi|703151242|ref|XP_010110069.1| (60S ribosomal protein L13a-3 [Morus notabilis])

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLASIVAKELL GQ+VVVVRCEE+ +SGGLVRQKMKYL
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEELCISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAP+KIFWRTVRGMIPHKTKRGAAALARLK YEG+PPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTKRGAAALARLKAYEGIPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+VVPDALKVLRLQKGHKYCLLGRLS EVGWNHYDTIRELE+KRKER+++ YERKKQL 
Sbjct: 121 KRMVVPDALKVLRLQKGHKYCLLGRLSSEVGWNHYDTIRELEKKRKERAQLAYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEKA EEKLGSQ++ILAPVKY
Sbjct: 181 KLRTKAEKAAEEKLGSQVDILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. NCBI nr
Match: gi|922421069|ref|XP_013616414.1| (PREDICTED: 60S ribosomal protein L13a-4 [Brassica oleracea var. oleracea])

HSP 1 Score: 367.9 bits (943), Expect = 1.200e-98
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEAKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RU85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_028400 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 4.400e-108
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL
Sbjct: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KLKAKAEKAVEEKLGSQLEILAPVKY
Sbjct: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A0J8ERB5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167570 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.300e-103
Identity = 195/206 (94.66%), Postives = 198/206 (96.12%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSG+MAKRVVVDARHHM GRLASIVAKELLTGQRVVV RCE IALSGGLVRQKMKYL
Sbjct: 1   MVSGSGVMAKRVVVDARHHMCGRLASIVAKELLTGQRVVVTRCEAIALSGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSK VYERKKQL 
Sbjct: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKAVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           +L+ KAEK  EEKLGSQLEILAPVKY
Sbjct: 181 RLRVKAEKTAEEKLGSQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A078F1F5_BRANA (BnaA02g30400D protein OS=Brassica napus GN=BnaC02g38740D PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.300e-99
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEAKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A078EG18_BRANA (BnaA06g29980D protein OS=Brassica napus GN=BnaC09g02550D PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.300e-99
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGAQLEILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Match: A0A0D3DBU6_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.300e-99
Identity = 184/206 (89.32%), Postives = 197/206 (95.63%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASIVAKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 206 MVSGSGICSKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 265

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALAR+KV+EGVPPPYDK+
Sbjct: 266 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARMKVFEGVPPPYDKV 325

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+VVYERKKQL 
Sbjct: 326 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEAKRKERSQVVYERKKQLN 385

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLG+QLEILAPVKY
Sbjct: 386 KLRAKAEKVAEEKLGAQLEILAPVKY 411

[Close]

BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 7.000e-99
Identity = 182/206 (88.35%), Postives = 193/206 (93.69%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASI AKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKER+ VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EEKLG+QL+ILAPVKY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.200e-98
Identity = 181/206 (87.86%), Postives = 193/206 (93.69%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLAS+VAK+LL GQ +VVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGA ALARLKV+EGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+VVPDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKER++ VYERKKQL 
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLGSQL++LAPVKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A3_ARATH (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.000e-98
Identity = 180/206 (87.38%), Postives = 192/206 (93.20%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVD RHHMLGRLAS  AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EG+PPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+V+YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EE+LGSQL++LAPVKY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

[Close]

BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: R13A2_ARATH (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 2.700e-98
Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHM GRLASI+AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+ +YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLGSQL++LA +KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.200e-94
Identity = 177/206 (85.92%), Postives = 192/206 (93.20%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLASIVAKELL GQ+VV+VR EEI +SGGLVRQKMKYL
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIH  APSKIFWRTVRGMIPHKTKRG  ALARLKVYEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+VVPDALKVLRLQKGHKYCLLG+LS EVGWN+YDTI+ELE+KRKERS+VVYERKKQL 
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAE+  +EKLGSQL+ILAPVKY
Sbjct: 181 KLRVKAEQVAQEKLGSQLDILAPVKY 205

[Close]

BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT5G48760.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 361.3 bits (926), Expect = 3.900e-100
Identity = 182/206 (88.35%), Postives = 193/206 (93.69%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHMLGRLASI AKELL GQ+VV+VRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKER+ VVYERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EEKLG+QL+ILAPVKY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT4G13170.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 359.8 bits (922), Expect = 1.100e-99
Identity = 180/206 (87.38%), Postives = 192/206 (93.20%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVD RHHMLGRLAS  AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EG+PPPYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+V+YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+ KAEK  EE+LGSQL++LAPVKY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

[Close]

BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT3G24830.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 359.4 bits (921), Expect = 1.500e-99
Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI +KRVVVDARHHM GRLASI+AKELL GQ VVVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKV+EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIRELEEKRKERSKVVYERKKQLI 180
           KR+V+PDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ELE KRKERS+ +YERKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLKAKAEKAVEEKLGSQLEILAPVKY 207
           KL+AKAEK  EEKLGSQL++LA +KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT3G07110.2 (Ribosomal protein L13 family protein)

HSP 1 Score: 355.9 bits (912), Expect = 1.700e-98
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 1


		  
Query: 1   MVSGSGIMAKRVVVDARHHMLGRLASIVAKELLTGQRVVVVRCEEIALSGGLVRQKMKYL 60
           MVSGSGI AKRVVVDARHHMLGRLAS+VAK+LL GQ +VVVRCEEI LSGGLVRQKMKY+
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 120
           RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGA ALARLKV+EGVP PYDKI
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRVVVPDALKVLRLQKGHKYCLLGRLSKEVGWNHYDTIR-ELEEKRKERSKVVYERKKQL 180
           KR+VVPDALKVLRLQ GHKYCLLGRLS EVGWNHYDTI+ ELE KRKER++ VYERKKQL
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKQELENKRKERAQAVYERKKQL 180

Query: 181 IKLKAKAEKAVEEKLGSQLEILAPVKY 207
            KL+AKAEK  EEKLGSQL++LAPVKY
Sbjct: 181 SKLRAKAEKVAEEKLGSQLDVLAPVKY 207

[Close]

BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Match: AT1G78630.1 (Ribosomal protein L13 family protein)

HSP 1 Score: 58.2 bits (139), Expect = 7.100e-9
Identity = 46/136 (33.82%), Postives = 66/136 (48.53%), Query Frame = 1


		  
Query: 13  VVDARHHMLGRLASIVAKELL------------TGQRVVVVRCEEIALSGGLVRQKMKYL 72
           VVDA   +LGRLAS +A  +              G  V+VV  E++A+SG    QK+   
Sbjct: 107 VVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRR 166

Query: 73  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPPPYDKI 132
              R    T  +   +  R P +I    VRGM+P K + G A    LKVY+G   P++  
Sbjct: 167 HSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP-KGRLGRALFNHLKVYKGPDHPHEAQ 226

Query: 133 KRVVVPDALKVLRLQK 137
           K + +P   K ++LQK
Sbjct: 227 KPLDLPIRDKRIQLQK 241

The following BLAST results are available for this feature:

BLAST of Spo21186.1 vs. NCBI nr
BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
BLAST of Spo21186.1 vs. TAIR (Arabidopsis)

BLAST of Spo21186.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902180030\|gb\|KNA09457.1\|	6.3e-108	100.	hypothetical protein SOVF_1533...	[more]
gi\|731347477\|ref\|XP_010685006.1\|	1.0e-102	94.6	PREDICTED: 60S ribosomal prote...	[more]
gi\|685353213\|ref\|XP_009111853.1\|	1.2e-98	89.3	PREDICTED: 60S ribosomal prote...	[more]
gi\|703151242\|ref\|XP_010110069.1\|	1.2e-98	89.3	60S ribosomal protein L13a-3 [...	[more]
gi\|922421069\|ref\|XP_013616414.1\|	1.2e-98	89.3	PREDICTED: 60S ribosomal prote...	[more]

BLAST of Spo21186.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RU85_SPIOL	4.4e-108	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8ERB5_BETVU	7.3e-103	94.6	Uncharacterized protein OS=Bet...	[more]
A0A078F1F5_BRANA	8.3e-99	89.3	BnaA02g30400D protein OS=Brass...	[more]
A0A078EG18_BRANA	8.3e-99	89.3	BnaA06g29980D protein OS=Brass...	[more]
A0A0D3DBU6_BRAOL	8.3e-99	89.3	Uncharacterized protein OS=Bra...	[more]

BLAST of Spo21186.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
R13A4_ARATH	7.0e-99	88.3	60S ribosomal protein L13a-4 O...	[more]
R13A1_ARATH	1.2e-98	87.8	60S ribosomal protein L13a-1 O...	[more]
R13A3_ARATH	2.0e-98	87.3	60S ribosomal protein L13a-3 O...	[more]
R13A2_ARATH	2.7e-98	86.8	60S ribosomal protein L13a-2 O...	[more]
RL13A_LUPLU	5.2e-94	85.9	60S ribosomal protein L13a OS=...	[more]

BLAST of Spo21186.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G48760.1	3.9e-100	88.3	Ribosomal protein L13 family p...	[more]
AT4G13170.1	1.1e-99	87.3	Ribosomal protein L13 family p...	[more]
AT3G24830.1	1.5e-99	86.8	Ribosomal protein L13 family p...	[more]
AT3G07110.2	1.7e-98	87.4	Ribosomal protein L13 family p...	[more]
AT1G78630.1	7.1e-9	33.8	Ribosomal protein L13 family p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005755	Ribosomal protein L13, eukaryotic/archaeal	PANTHER	PTHR11545:SF3	60S RIBOSOMAL PROTEIN L13A	coord: 1..204 score: 3.7E
IPR005755	Ribosomal protein L13, eukaryotic/archaeal	TIGRFAMs	TIGR01077	TIGR01077	coord: 12..153 score: 4.5
IPR005822	Ribosomal protein L13	GENE3D	3.90.1180.10		coord: 12..153 score: 1.0
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 11..135 score: 19
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 1..204 score: 3.7E
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 12..118 score: 1.6
IPR005822	Ribosomal protein L13	unknown	SSF52161	Ribosomal protein L13	coord: 12..154 score: 4.32
IPR023563	Ribosomal protein L13, conserved site	PROSITE	PS00783	RIBOSOMAL_L13	coord: 89..112 scor

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016020	membrane
molecular_function	GO:0003735	structural constituent of ribosome