Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAATTAAAAAATTGACAATTGCAAAATTGCGGTCCGGATTCCACAAAACTGCACGTGTACCTACTTTCCCATTCCTGGAGTTGCAACTGTTTCCATCCACCACCGTCCACCGTCCACCGTCCACCGCCCACCGGCAGAAATTGTAACAAAGAATGGCGCTTGCGAAAGGAGTATGCCTTAACCACATAGCCAGAGAATCAGCTGACGTCAAACGCCTCGCCGCTTTTTACCAACAGGTTTTCTCTCTATAACTTTACTCTCTTCAACTTCATTTTCATTTTCATTTTCATTTTCATTTTCATCTTCATTTTGAATCACAAACTTTACAAACAGAAATTGTATTATGTGTGGCAGGTACTAGGATTTGAGCAAATACAGAGTCCTAAATTCGGCGAATTTGAGGTGATCTGGCTGAAGCTTCCCCCATCTTTCTCTCTCCATCTCATCCAGAGGGATCCTTCAATTAAACTCCCTGAAGGTCCGTCTACTTTCAAAGATCCTAAGAACCTTCCTAGAGGACATCATCTCGCCTTCACTGTCTCCAATTTCGATCATGTTGTTCAATTTCTCAAGGTAATCATCCTATTTTACATTCTCACTTATCTGCTTTTTTATGATCATCCTGTTTATTTTATTTTTATTCAGAATTCCAATTAAGTATGGAACTACTTTTGTGCTAAACAATCTTTCATTTCCATATACTTATTCCCGAATAGGAGAATATTATACCTGGGATACATGATGCCAGTTGCACACCACGGGTAAACCCACAGGCACAGGCCTTAGGTTGCACGACTTGCACCAAGGGGACGGGTAAAAATCAAGTAAAAAAGTATATTTAACATGATAATAATTGCAGGTGAAGTAGGTTGTTACGACTTACGAGTAGTATTGTACGAGTATTGTCTATCAAGATATTGCATGATCATTATATTATCCTGCATTTAGAGAACCAAAATTAGAGGGGTTTAGTGAAAATTAAAACTGCATTTTATCATTTTATGACGTGGTTCAATTGTTGTCATCAAAATCATGAATTGAGGTGACTGATTTTAAAGTTCTTTTTTTTTTTGAGATGGTCTGATTTTAAAGTTCTTAATACTTACTAATTTACAGGAGAAGGGAATTGAGACATTTCAAAAGACTCAACCAGATGGAAAGACCAAACAGTTGTTTTTCTTTGATCCAGATGGTATGACTCTCTGTCTCTCTACAGCTAATATTTTTCCTTCGGAATTTGCATTAGCTAGATTGTATTAATCCTTCTTGCTTAAGGCTAGTTATAAGAAGTTTGATTTTGTTAGAATGTCTGTTTTTGTGATTCTCAGGTAATGGCTTAGAAGTCGTGAGCTGTTGAACTCTCCATCTCAGTAAAAGTGACTTTCTTTTCTACTGTAATTTTAGTTGTTAAATAAGATTTGTGTTATGGTAATACTTGAAGCAGACCTGCGTAAGAAAGTTATGAAACTCGAGATCTAAAGTTATGATCTTAGCTCTACCTTTGTTTGGATAGTCAACTGATTTCTTAAACTTGAGCTCTTGTATTCAAGACTGATCTCAACTTTGGAGACCTTGTAAATGTAGTTGAAATTGTTGTTTATCTTCTCTTTGTTGCCTGTTTTTATAAGGTATTCCAATGATTAATGAAAAATCACCTTTTTATAACTGAA TAAATTAAAAAATTGACAATTGCAAAATTGCGGTCCGGATTCCACAAAACTGCACGTGTACCTACTTTCCCATTCCTGGAGTTGCAACTGTTTCCATCCACCACCGTCCACCGTCCACCGTCCACCGCCCACCGGCAGAAATTGTAACAAAGAATGGCGCTTGCGAAAGGAGTATGCCTTAACCACATAGCCAGAGAATCAGCTGACGTCAAACGCCTCGCCGCTTTTTACCAACAGGTACTAGGATTTGAGCAAATACAGAGTCCTAAATTCGGCGAATTTGAGGTGATCTGGCTGAAGCTTCCCCCATCTTTCTCTCTCCATCTCATCCAGAGGGATCCTTCAATTAAACTCCCTGAAGGTCCGTCTACTTTCAAAGATCCTAAGAACCTTCCTAGAGGACATCATCTCGCCTTCACTGTCTCCAATTTCGATCATGTTGTTCAATTTCTCAAGGAGAAGGGAATTGAGACATTTCAAAAGACTCAACCAGATGGAAAGACCAAACAGTTGTTTTTCTTTGATCCAGATGGTAATGGCTTAGAAGTCGTGAGCTGTTGAACTCTCCATCTCAGTAAAAGTGACTTTCTTTTCTACTGTAATTTTAGTTGTTAAATAAGATTTGTGTTATGGTAATACTTGAAGCAGACCTGCGTAAGAAAGTTATGAAACTCGAGATCTAAAGTTATGATCTTAGCTCTACCTTTGTTTGGATAGTCAACTGATTTCTTAAACTTGAGCTCTTGTATTCAAGACTGATCTCAACTTTGGAGACCTTGTAAATGTAGTTGAAATTGTTGTTTATCTTCTCTTTGTTGCCTGTTTTTATAAGGTATTCCAATGATTAATGAAAAATCACCTTTTTATAACTGAA ATGGCGCTTGCGAAAGGAGTATGCCTTAACCACATAGCCAGAGAATCAGCTGACGTCAAACGCCTCGCCGCTTTTTACCAACAGGTACTAGGATTTGAGCAAATACAGAGTCCTAAATTCGGCGAATTTGAGGTGATCTGGCTGAAGCTTCCCCCATCTTTCTCTCTCCATCTCATCCAGAGGGATCCTTCAATTAAACTCCCTGAAGGTCCGTCTACTTTCAAAGATCCTAAGAACCTTCCTAGAGGACATCATCTCGCCTTCACTGTCTCCAATTTCGATCATGTTGTTCAATTTCTCAAGGAGAAGGGAATTGAGACATTTCAAAAGACTCAACCAGATGGAAAGACCAAACAGTTGTTTTTCTTTGATCCAGATGGTAATGGCTTAGAAGTCGTGAGCTGTTGA MALAKGVCLNHIARESADVKRLAAFYQQVLGFEQIQSPKFGEFEVIWLKLPPSFSLHLIQRDPSIKLPEGPSTFKDPKNLPRGHHLAFTVSNFDHVVQFLKEKGIETFQKTQPDGKTKQLFFFDPDGNGLEVVSC Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo21445.1 vs. NCBI nr
Match: gi|902210358|gb|KNA16407.1| (hypothetical protein SOVF_089360 [Spinacia oleracea]) HSP 1 Score: 283.5 bits (724), Expect = 1.900e-73 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1
BLAST of Spo21445.1 vs. NCBI nr
Match: gi|731364761|ref|XP_010694152.1| (PREDICTED: lactoylglutathione lyase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 231.9 bits (590), Expect = 6.700e-58 Identity = 110/138 (79.71%), Postives = 123/138 (89.13%), Query Frame = 1
BLAST of Spo21445.1 vs. NCBI nr
Match: gi|695061054|ref|XP_009418946.1| (PREDICTED: lactoylglutathione lyase [Musa acuminata subsp. malaccensis]) HSP 1 Score: 221.5 bits (563), Expect = 9.100e-55 Identity = 103/134 (76.87%), Postives = 119/134 (88.81%), Query Frame = 1
BLAST of Spo21445.1 vs. NCBI nr
Match: gi|719972308|ref|XP_010277153.1| (PREDICTED: lactoylglutathione lyase [Nelumbo nucifera]) HSP 1 Score: 220.7 bits (561), Expect = 1.500e-54 Identity = 103/137 (75.18%), Postives = 119/137 (86.86%), Query Frame = 1
BLAST of Spo21445.1 vs. NCBI nr
Match: gi|1012130262|ref|XP_015964778.1| (PREDICTED: lactoylglutathione lyase [Arachis duranensis]) HSP 1 Score: 202.6 bits (514), Expect = 4.400e-49 Identity = 96/139 (69.06%), Postives = 115/139 (82.73%), Query Frame = 1
BLAST of Spo21445.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RC72_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089360 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 1.400e-73 Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1
BLAST of Spo21445.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E5W2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g070740 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 4.700e-58 Identity = 110/138 (79.71%), Postives = 123/138 (89.13%), Query Frame = 1
BLAST of Spo21445.1 vs. UniProtKB/TrEMBL
Match: M0U3I2_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 6.300e-55 Identity = 103/134 (76.87%), Postives = 119/134 (88.81%), Query Frame = 1
BLAST of Spo21445.1 vs. UniProtKB/TrEMBL
Match: A0A0D2M5X0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G024200 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.200e-48 Identity = 90/138 (65.22%), Postives = 113/138 (81.88%), Query Frame = 1
BLAST of Spo21445.1 vs. UniProtKB/TrEMBL
Match: M1D5L8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400032255 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.400e-48 Identity = 91/135 (67.41%), Postives = 112/135 (82.96%), Query Frame = 1
BLAST of Spo21445.1 vs. ExPASy Swiss-Prot
Match: YWKD_BACSU (Uncharacterized protein YwkD OS=Bacillus subtilis (strain 168) GN=ywkD PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.300e-8 Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 1
BLAST of Spo21445.1 vs. TAIR (Arabidopsis)
Match: AT2G32090.1 (Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 184.5 bits (467), Expect = 4.300e-47 Identity = 83/130 (63.85%), Postives = 103/130 (79.23%), Query Frame = 1
BLAST of Spo21445.1 vs. TAIR (Arabidopsis)
Match: AT1G80160.1 (Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 68.9 bits (167), Expect = 2.700e-12 Identity = 42/129 (32.56%), Postives = 64/129 (49.61%), Query Frame = 1
BLAST of Spo21445.1 vs. TAIR (Arabidopsis)
Match: AT1G15380.1 (Lactoylglutathione lyase / glyoxalase I family protein) HSP 1 Score: 65.1 bits (157), Expect = 3.800e-11 Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21445.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21445.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21445.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo21445.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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