Spo21593.1 (mRNA) | SpinachBase

Overview


Name	Spo21593.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Thioredoxin m family protein
Location	chr2 : 55862711 .. 55864732 (+)
Sequence length	1155

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAGTGGTCCTTACAAACAAAAATGATTTACGAAATAGGGACTCAAACAAATGTGATCCACATGAATTTGATCATTCTATGCACCTCAGAAATCTGAACAAAGTTATCCACAATTCTTCCCCTCAACTAAATCTAAAACCTGTATTTCCTCCACATTACTACTACTTGTAAAACAAAGAGCAAAAAAGTTCAACAAAATAAATTAATAATATTATCATGGCTATAGAAAACTGTTTACAGTTGAGCACATCAGCAAGTGTAGGAACTGTTGCTGTTAAATCTCATGTTCATCATCTTCAACCTTCCTCCAAGGTTAATGTGCCGACTTTTCGAGGTCTAAAAAGATCGTTTCCGGCTTTATCTTCCTCGGTTTCTTCATCGTCTCCTCGACAGTTTCGATACTCTAGTGTTGTTTGCAAGGCTAGTGAAGCTGTCAAGGAAGGTTAGTTTTTCTTCCTTTTCACTACCATAATTGCAGAATTTCTATCTCTATCAGTTTTCTTATTCCATTTTAAATTTTACATTTTTGGCTATTAAATTTGTTGTATGTATCTGCAATTTCAATAAATCATACTCTATACTAGGAAATTGTAGTGTATGTTACTCAGACTCAGGGTACTAGCTAGCGTCGGACATGGGTACGTGTTCAAGTGTTCGACATGGCTAAATTGGAGAAAATTTCCTTGATTTTAGACCAAGATGAAGGTTTGGAGTGTCCACAACTCCACTTTCATGTCCAAGTGCCGAGAATCCGACACGGATACTTGAGGTTAAACAAAGAGTTTGAGTAACATGATTGTAGCTTGTTTATAATCTTTATAGATATCCTATGTCCAATATGTTAGAATACGCCCTGAATCGGTCAAGTTCCTTCACTGCATCGCCCTATCATTAATGGGGTTCGAAGGCCTATTTTCTGGACTAGGGTTATCTGATTCGAAAACATTATGATATCCATTAGTAGGATTATCTGTTTTGGGCTTGTTTTTTGGGTTTTTCGGCATCTGTCTAGAGTGTACTATATAAGCTCATAACCTAATTGTATTTTGTTTTGTATTCCTTAAGATAAATAAAGCTTCCTCTTGTGTGTCTGTGAACGTAATTAAAACATTGTTAATGAACCACGTTATAACATAATATTTTTCCTATAACTTTGTAACATTGATTTATTAGCCTTGTTTTGATTTGAGTGTACAATAGAGCAATTGAACATACAAAATAATCCCACAAAACAAGTGATTTTGTTTTACATTAAGCACTAATTAAATCAGCTAGCAAAACTGATAAATTTCTTGTTTTGTGTTTATAGTCCAAGATGTGAATGACTCAAGTTGGAAGGAGTTTGTCCTAGAGAGCGAAGTCCCAGTGATGGTAGACTTCTGGGCCCCATGGTGTGGACCCTGCAAGCTCATCGCCCCGGTGATCGACGAGCTGGCAAAAGAATATTCCGGAAAGATAGCAGTATACAAGCTGAACACAGATGAAGCACCAGGTATTGCTACTCAGTACAACATAAGGAGTATTCCAACAGTGTTGTTTTTCAAGAATGGTGAAAGGAAAGAGAGTATCATAGGTGCTGTGCCTAAGAGTACTTTGACTGATTCCATTGAGAAATACTTATCTCCTTAAAATAAACACATACTTTGAACTGGAGTACATGTGTTTTTTTTACGGAGTTTTATTTTAGGGGTGCAACGCGAGGACTTCTAGAAGGTCACTCATCCTGGTACTACTCTTGTAAAAACATACATGTGTTTTAGTACTAATTAAAGATCTCAGTCTCTGTCTCTTTTTTCGTAATTTGAAAAACAAAACTAAGGAACAACTCCATTTGATGAAGAGAGTTGGTTTTAGTATTTTGTATATCATCGATCATTTGTTGATATTATTGTGATATCTTTCAATGTTTAGAAGAATATGTTAATTAATTACTCAGAGCTTCTGTATAGTTTGATTTCCTGCTGTTAAATGAGTTGCTGTATTGTGAAAATTGGATGGATCTTAGCCAAGTAGAGTTCTGG

mRNA sequence

CCAAGTGGTCCTTACAAACAAAAATGATTTACGAAATAGGGACTCAAACAAATGTGATCCACATGAATTTGATCATTCTATGCACCTCAGAAATCTGAACAAAGTTATCCACAATTCTTCCCCTCAACTAAATCTAAAACCTGTATTTCCTCCACATTACTACTACTTGTAAAACAAAGAGCAAAAAAGTTCAACAAAATAAATTAATAATATTATCATGGCTATAGAAAACTGTTTACAGTTGAGCACATCAGCAAGTGTAGGAACTGTTGCTGTTAAATCTCATGTTCATCATCTTCAACCTTCCTCCAAGGTTAATGTGCCGACTTTTCGAGGTCTAAAAAGATCGTTTCCGGCTTTATCTTCCTCGGTTTCTTCATCGTCTCCTCGACAGTTTCGATACTCTAGTGTTGTTTGCAAGGCTAGTGAAGCTGTCAAGGAAGTCCAAGATGTGAATGACTCAAGTTGGAAGGAGTTTGTCCTAGAGAGCGAAGTCCCAGTGATGGTAGACTTCTGGGCCCCATGGTGTGGACCCTGCAAGCTCATCGCCCCGGTGATCGACGAGCTGGCAAAAGAATATTCCGGAAAGATAGCAGTATACAAGCTGAACACAGATGAAGCACCAGGTATTGCTACTCAGTACAACATAAGGAGTATTCCAACAGTGTTGTTTTTCAAGAATGGTGAAAGGAAAGAGAGTATCATAGGTGCTGTGCCTAAGAGTACTTTGACTGATTCCATTGAGAAATACTTATCTCCTTAAAATAAACACATACTTTGAACTGGAGTACATGTGTTTTTTTTACGGAGTTTTATTTTAGGGGTGCAACGCGAGGACTTCTAGAAGGTCACTCATCCTGGTACTACTCTTGTAAAAACATACATGTGTTTTAGTACTAATTAAAGATCTCAGTCTCTGTCTCTTTTTTCGTAATTTGAAAAACAAAACTAAGGAACAACTCCATTTGATGAAGAGAGTTGGTTTTAGTATTTTGTATATCATCGATCATTTGTTGATATTATTGTGATATCTTTCAATGTTTAGAAGAATATGTTAATTAATTACTCAGAGCTTCTGTATAGTTTGATTTCCTGCTGTTAAATGAGTTGCTGTATTGTGAAAATTGGATGGATCTTAGCCAAGTAGAGTTCTGG

Coding sequence (CDS)

ATGGCTATAGAAAACTGTTTACAGTTGAGCACATCAGCAAGTGTAGGAACTGTTGCTGTTAAATCTCATGTTCATCATCTTCAACCTTCCTCCAAGGTTAATGTGCCGACTTTTCGAGGTCTAAAAAGATCGTTTCCGGCTTTATCTTCCTCGGTTTCTTCATCGTCTCCTCGACAGTTTCGATACTCTAGTGTTGTTTGCAAGGCTAGTGAAGCTGTCAAGGAAGTCCAAGATGTGAATGACTCAAGTTGGAAGGAGTTTGTCCTAGAGAGCGAAGTCCCAGTGATGGTAGACTTCTGGGCCCCATGGTGTGGACCCTGCAAGCTCATCGCCCCGGTGATCGACGAGCTGGCAAAAGAATATTCCGGAAAGATAGCAGTATACAAGCTGAACACAGATGAAGCACCAGGTATTGCTACTCAGTACAACATAAGGAGTATTCCAACAGTGTTGTTTTTCAAGAATGGTGAAAGGAAAGAGAGTATCATAGGTGCTGTGCCTAAGAGTACTTTGACTGATTCCATTGAGAAATACTTATCTCCTTAA

Protein sequence

MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLSP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo21593	Spo21593	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo21593.1	Spo21593.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21593.1.exon.1	Spo21593.1.exon.1	exon
Spo21593.1.exon.2	Spo21593.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21593.1.utr5p.1	Spo21593.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21593.1.CDS.1	Spo21593.1.CDS.1	CDS
Spo21593.1.CDS.2	Spo21593.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21593.1.utr3p.1	Spo21593.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|2507458|sp|P07591.2|TRXM_SPIOL (RecName: Full=Thioredoxin M-type, chloroplastic; Short=Trx-M; Contains: RecName: Full=Thioredoxin M-type Mc; Contains: RecName: Full=Thioredoxin M-type Md; Flags: Precursor)

HSP 1 Score: 359.4 bits (921), Expect = 3.700e-96
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|21354|emb|CAA35827.1| (unnamed protein product [Spinacia oleracea])

HSP 1 Score: 354.4 bits (908), Expect = 1.200e-94
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHV+HLQPSSK+NVP+FRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVYHLQPSSKLNVPSFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|731361935|ref|XP_010692624.1| (PREDICTED: thioredoxin M-type, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 300.8 bits (769), Expect = 1.600e-78
Identity = 155/185 (83.78%), Postives = 168/185 (90.81%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSS-----VSSS 60
           MAIENCLQLST+ASVGTVAVKSH   L P  K+N+ TF+GLK+SFPALSSS     VSSS
Sbjct: 1   MAIENCLQLSTTASVGTVAVKSHALQLPPY-KLNLTTFQGLKKSFPALSSSASTSLVSSS 60

Query: 61  SPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVID 120
           SPR +R SSVVCKASEAVK+VQDVNDSSWKE VL+S+VPVMVDFWAPWCGPCKLIAPV+D
Sbjct: 61  SPRTYRKSSVVCKASEAVKQVQDVNDSSWKELVLDSQVPVMVDFWAPWCGPCKLIAPVVD 120

Query: 121 ELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSI 180
           ELAKE+SGKIAVYKLNTDE+P IATQYNIRSIPTVLFFKNGERKESIIGAVPKSTL D+I
Sbjct: 121 ELAKEFSGKIAVYKLNTDESPNIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLADTI 180

[Close]

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|756179878|gb|AJK93574.1| (chloroplast M-type thioredoxin [Suaeda glauca])

HSP 1 Score: 296.2 bits (757), Expect = 3.900e-77
Identity = 152/186 (81.72%), Postives = 169/186 (90.86%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSS---- 60
           MA+ENCLQLSTSASVGTVAVKSH H+L PS K+N+PTF+GLK+SF +LSSS  +SS    
Sbjct: 1   MALENCLQLSTSASVGTVAVKSHAHYL-PSYKLNLPTFQGLKKSFSSLSSSSYASSSSLL 60

Query: 61  --PRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
             PR+ R S VVCKASEAVK+VQDVND+SWKE VLES++PVMVDFWAPWCGPCKLIAPVI
Sbjct: 61  SSPRRCRSSIVVCKASEAVKQVQDVNDASWKEQVLESQIPVMVDFWAPWCGPCKLIAPVI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEYSGKIAVYKLNTDE+P IATQY+IRSIPTVLFFKNGERKESIIGAVPKSTLTD+
Sbjct: 121 DELAKEYSGKIAVYKLNTDESPNIATQYSIRSIPTVLFFKNGERKESIIGAVPKSTLTDT 180

[Close]

BLAST of Spo21593.1 vs. NCBI nr
Match: gi|388504900|gb|AFK40516.1| (unknown [Lotus japonicus])

HSP 1 Score: 225.3 bits (573), Expect = 8.400e-56
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MA+E+CLQ++T   VGTVA    +H      KV  PT+RG K+ F   S S +SS+P  +
Sbjct: 1   MAMESCLQVTT---VGTVARPQSLHPFSAREKVVFPTYRGFKKCF---SKSATSSNPSLY 60

Query: 61  ------RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
                 R  SV+C A EAV EV+ V +SSW + V+ SE+PV+VDFWAPWCGPC++IAP+I
Sbjct: 61  SAAGTNRKFSVICNAREAVNEVKVVTESSWNDLVIASEIPVLVDFWAPWCGPCRMIAPLI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEY+GKIA YKLNTD++P IATQY IRSIPTVLFFKNGE+KES+IGAVPKSTLT S
Sbjct: 121 DELAKEYAGKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLTAS 180

[Close]

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJC2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_172740 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.400e-95
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHV+HLQPSSK+NVP+FRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVYHLQPSSKLNVPSFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI85_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g021580 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.100e-78
Identity = 155/185 (83.78%), Postives = 168/185 (90.81%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSS-----VSSS 60
           MAIENCLQLST+ASVGTVAVKSH   L P  K+N+ TF+GLK+SFPALSSS     VSSS
Sbjct: 1   MAIENCLQLSTTASVGTVAVKSHALQLPPY-KLNLTTFQGLKKSFPALSSSASTSLVSSS 60

Query: 61  SPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVID 120
           SPR +R SSVVCKASEAVK+VQDVNDSSWKE VL+S+VPVMVDFWAPWCGPCKLIAPV+D
Sbjct: 61  SPRTYRKSSVVCKASEAVKQVQDVNDSSWKELVLDSQVPVMVDFWAPWCGPCKLIAPVVD 120

Query: 121 ELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSI 180
           ELAKE+SGKIAVYKLNTDE+P IATQYNIRSIPTVLFFKNGERKESIIGAVPKSTL D+I
Sbjct: 121 ELAKEFSGKIAVYKLNTDESPNIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLADTI 180

[Close]

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AX10_9CARY (Suaeda glauca chloroplast M-type thioredoxin mRNA OS=Suaeda glauca PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.700e-77
Identity = 152/186 (81.72%), Postives = 169/186 (90.86%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSS---- 60
           MA+ENCLQLSTSASVGTVAVKSH H+L PS K+N+PTF+GLK+SF +LSSS  +SS    
Sbjct: 1   MALENCLQLSTSASVGTVAVKSHAHYL-PSYKLNLPTFQGLKKSFSSLSSSSYASSSSLL 60

Query: 61  --PRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
             PR+ R S VVCKASEAVK+VQDVND+SWKE VLES++PVMVDFWAPWCGPCKLIAPVI
Sbjct: 61  SSPRRCRSSIVVCKASEAVKQVQDVNDASWKEQVLESQIPVMVDFWAPWCGPCKLIAPVI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEYSGKIAVYKLNTDE+P IATQY+IRSIPTVLFFKNGERKESIIGAVPKSTLTD+
Sbjct: 121 DELAKEYSGKIAVYKLNTDESPNIATQYSIRSIPTVLFFKNGERKESIIGAVPKSTLTDT 180

[Close]

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: I3SJS4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.900e-56
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MA+E+CLQ++T   VGTVA    +H      KV  PT+RG K+ F   S S +SS+P  +
Sbjct: 1   MAMESCLQVTT---VGTVARPQSLHPFSAREKVVFPTYRGFKKCF---SKSATSSNPSLY 60

Query: 61  ------RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVI 120
                 R  SV+C A EAV EV+ V +SSW + V+ SE+PV+VDFWAPWCGPC++IAP+I
Sbjct: 61  SAAGTNRKFSVICNAREAVNEVKVVTESSWNDLVIASEIPVLVDFWAPWCGPCRMIAPLI 120

Query: 121 DELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDS 180
           DELAKEY+GKIA YKLNTD++P IATQY IRSIPTVLFFKNGE+KES+IGAVPKSTLT S
Sbjct: 121 DELAKEYAGKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLTAS 180

[Close]

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Match: E0CQM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15310 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.200e-54
Identity = 114/182 (62.64%), Postives = 136/182 (74.73%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSS---SSP 60
           MA+ENC Q+ST +      ++SH H      K+N+PT +G+K S  + SSS SS   S  
Sbjct: 1   MALENCFQVSTVSCARAGVLQSH-HPFSAKEKLNLPTCKGVKPSILSFSSSPSSLDYSFH 60

Query: 61  RQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDEL 120
           R  R S +VCKA EAV EVQ V DSSW   V+ SE PV+V+FWAPWCGPC++IAPVIDEL
Sbjct: 61  RICRKSRIVCKAREAVDEVQVVTDSSWSNVVIASENPVLVEFWAPWCGPCRMIAPVIDEL 120

Query: 121 AKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEK 180
           AKEY+GKI   K+NTD+ P IATQY IRSIPTVLFFKNGERKES+IGAVPKSTLT +IEK
Sbjct: 121 AKEYAGKIVCCKVNTDDCPNIATQYGIRSIPTVLFFKNGERKESVIGAVPKSTLTATIEK 180

[Close]

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 2.300e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1


		  
Query: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60
           MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQF 60

Query: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120
           RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE
Sbjct: 61  RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 120

Query: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
           YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS
Sbjct: 121 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180

Query: 181 P 182
           P
Sbjct: 181 P 181

[Close]

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.100e-46
Identity = 84/115 (73.04%), Postives = 100/115 (86.96%), Query Frame = 1


		  
Query: 65  VVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK 124
           V+  A EAV EVQ VNDSSW E V+ SE PV+VDFWAPWCGPC++IAP+IDELAKEY+GK
Sbjct: 58  VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGK 117

Query: 125 IAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           I  YKLNTDE+P  AT+Y IRSIPTVLFFKNGERK+S+IGAVPK+TL++ +EKY+
Sbjct: 118 IKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM5_ORYSJ (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.800e-40
Identity = 84/141 (59.57%), Postives = 103/141 (73.05%), Query Frame = 1


		  
Query: 40  GLKRSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDF 99
           G  +S P LS  V+S SP +   S   C+ S  V EV   ++ +W   VL SE PV+V+F
Sbjct: 34  GSSQSKPRLS--VASPSPLR-PASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEF 93

Query: 100 WAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERK 159
           WAPWCGPC++IAPVIDELAKEY GKI   K+NTD++P IAT Y IRSIPTVL FKNGE+K
Sbjct: 94  WAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKK 153

Query: 160 ESIIGAVPKSTLTDSIEKYLS 181
           ES+IGAVPK+TL   I+KY+S
Sbjct: 154 ESVIGAVPKTTLATIIDKYVS 171

[Close]

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 9.400e-39
Identity = 80/179 (44.69%), Postives = 120/179 (67.04%), Query Frame = 1


		  
Query: 7   LQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS-- 66
           L ++ S S  + A       + P+  +    FRGLK S   ++ S S  + R+ R +   
Sbjct: 16  LPIAASVSSSSAAPSVSRRRISPARFLE---FRGLKSSRSLVTQSASLGANRRTRIARGG 75

Query: 67  -VVCKASE---AVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 126
            + C+A +   A  EV +++DS W+  VLES+VPV+V+FWAPWCGPC++I P++D+LAK+
Sbjct: 76  RIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKD 135

Query: 127 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           ++GK   YK+NTDE+P  A +Y IRS+PTV+ FK GE+K+SIIGAVP+ TL  +IE++L
Sbjct: 136 FAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Match: TRXM1_ORYSJ (Thioredoxin M1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os02g0639900 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.700e-38
Identity = 73/118 (61.86%), Postives = 94/118 (79.66%), Query Frame = 1


		  
Query: 64  SVVCKAS--EAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEY 123
           SVVC A   E   +V DV  S+W+  V+ESE+PV+V+FWA WCGPCK+I PVI +L+KEY
Sbjct: 54  SVVCAAQGQETSFQVPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMIDPVIGKLSKEY 113

Query: 124 SGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
            GK+  YKLNTDE P IATQ+ IRSIPT++ FKNGE+K+++IGAVP+STL  SI+KY+
Sbjct: 114 EGKLNCYKLNTDENPDIATQFGIRSIPTMMIFKNGEKKDAVIGAVPESTLVSSIDKYI 171

[Close]

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT3G15360.1 (thioredoxin M-type 4)

HSP 1 Score: 161.4 bits (407), Expect = 5.300e-40
Identity = 80/179 (44.69%), Postives = 120/179 (67.04%), Query Frame = 1


		  
Query: 7   LQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS-- 66
           L ++ S S  + A       + P+  +    FRGLK S   ++ S S  + R+ R +   
Sbjct: 16  LPIAASVSSSSAAPSVSRRRISPARFLE---FRGLKSSRSLVTQSASLGANRRTRIARGG 75

Query: 67  -VVCKASE---AVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKE 126
            + C+A +   A  EV +++DS W+  VLES+VPV+V+FWAPWCGPC++I P++D+LAK+
Sbjct: 76  RIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKD 135

Query: 127 YSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           ++GK   YK+NTDE+P  A +Y IRS+PTV+ FK GE+K+SIIGAVP+ TL  +IE++L
Sbjct: 136 FAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT4G03520.1 (Thioredoxin superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 2.600e-39
Identity = 75/147 (51.02%), Postives = 106/147 (72.11%), Query Frame = 1


		  
Query: 35  VPTFRGLKRSFPALSSSVSS-SSPRQFRYS-SVVCKASEAVKEVQDVNDSSWKEFVLESE 94
           +P   GL+       +S++S   PR  R   +VVC+A E   ++Q VNDS+W   VL++ 
Sbjct: 39  LPESSGLRIRLSLSPASLTSIHQPRVSRLRRAVVCEAQETTTDIQVVNDSTWDSLVLKAT 98

Query: 95  VPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLF 154
            PV+VDFWAPWCGPCK+I P++++LA+ Y+GKI  YKLNTDE+P    QY +RSIPT++ 
Sbjct: 99  GPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMI 158

Query: 155 FKNGERKESIIGAVPKSTLTDSIEKYL 180
           F  GE+K++IIGAVPK+TLT S++K+L
Sbjct: 159 FVGGEKKDTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT1G03680.1 (thioredoxin M-type 1)

HSP 1 Score: 151.0 bits (380), Expect = 7.100e-37
Identity = 71/145 (48.97%), Postives = 98/145 (67.59%), Query Frame = 1


		  
Query: 35  VPTFRGLKRSFPALSSSVSSSSPRQFRYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVP 94
           +P   GL+      S S +S   R  R   V+C+A +    +  VNDS+W   VL+++ P
Sbjct: 37  LPESSGLRTRVSLSSLSKNSRVSRLRR--GVICEAQDTATGIPVVNDSTWDSLVLKADEP 96

Query: 95  VMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK 154
           V VDFWAPWCGPCK+I P+++ELA++Y+G+   YKLNTDE+P    QY +RSIPT++ F 
Sbjct: 97  VFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFV 156

Query: 155 NGERKESIIGAVPKSTLTDSIEKYL 180
           NGE+K++IIGAV K TL  SI K+L
Sbjct: 157 NGEKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT2G15570.2 (Thioredoxin superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 7.900e-28
Identity = 67/173 (38.73%), Postives = 102/173 (58.96%), Query Frame = 1


		  
Query: 10  STSASVGTVAVKSHV--HHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSSVVC 69
           S+S+S+     + H   H   PS    V +F      F    S +SSS+ R  R S +  
Sbjct: 5   SSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASR-LRLSPLCV 64

Query: 70  KASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAV 129
           + S A  EV      SW++ VL+SE PV+V+F+  WCGPC+++  +IDE+A +Y+GK+  
Sbjct: 65  RDSRAAAEV---TQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNC 124

Query: 130 YKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 181
           Y LN D    +A +Y I+++P VL FKNGE++ESI+G +PK     +IE+ L+
Sbjct: 125 YLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLN 173

[Close]

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Match: AT1G43560.1 (thioredoxin Y2)

HSP 1 Score: 91.7 bits (226), Expect = 5.100e-19
Identity = 37/98 (37.76%), Postives = 67/98 (68.37%), Query Frame = 1


		  
Query: 82  SSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQ 141
           +S+ + +  S+ PV+VDF+A WCGPC+L+ P+++E+++     IAV K++T++ P +A +
Sbjct: 66  NSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLANK 125

Query: 142 YNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 180
           Y I ++PT + FK+G+  +   GA+P + L + IE  L
Sbjct: 126 YQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSL 163

The following BLAST results are available for this feature:

BLAST of Spo21593.1 vs. NCBI nr
BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
BLAST of Spo21593.1 vs. TAIR (Arabidopsis)

BLAST of Spo21593.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|2507458\|sp\|P07591.2\|TRXM_SPIOL	3.7e-96	100.	RecName: Full=Thioredoxin M-ty...	[more]
gi\|21354\|emb\|CAA35827.1\|	1.2e-94	98.3	unnamed protein product [Spina...	[more]
gi\|731361935\|ref\|XP_010692624.1\|	1.6e-78	83.7	PREDICTED: thioredoxin M-type,...	[more]
gi\|756179878\|gb\|AJK93574.1\|	3.9e-77	81.7	chloroplast M-type thioredoxin...	[more]
gi\|388504900\|gb\|AFK40516.1\|	8.4e-56	61.2	unknown [Lotus japonicus]	[more]

BLAST of Spo21593.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QJC2_SPIOL	8.4e-95	98.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8BI85_BETVU	1.1e-78	83.7	Uncharacterized protein OS=Bet...	[more]
A0A0C5AX10_9CARY	2.7e-77	81.7	Suaeda glauca chloroplast M-ty...	[more]
I3SJS4_LOTJA	5.9e-56	61.2	Uncharacterized protein OS=Lot...	[more]
E0CQM3_VITVI	3.2e-54	62.6	Putative uncharacterized prote...	[more]

BLAST of Spo21593.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TRXM_SPIOL	2.3e-98	100.	Thioredoxin M-type, chloroplas...	[more]
TRXM_PEA	2.1e-46	73.0	Thioredoxin M-type, chloroplas...	[more]
TRXM5_ORYSJ	3.8e-40	59.5	Thioredoxin M5, chloroplastic ...	[more]
TRXM4_ARATH	9.4e-39	44.6	Thioredoxin M4, chloroplastic ...	[more]
TRXM1_ORYSJ	2.7e-38	61.8	Thioredoxin M1, chloroplastic ...	[more]

BLAST of Spo21593.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G15360.1	5.3e-40	44.6	thioredoxin M-type 4	[more]
AT4G03520.1	2.6e-39	51.0	Thioredoxin superfamily protei...	[more]
AT1G03680.1	7.1e-37	48.9	thioredoxin M-type 1	[more]
AT2G15570.2	7.9e-28	38.7	Thioredoxin superfamily protei...	[more]
AT1G43560.1	5.1e-19	37.7	thioredoxin Y2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 2..180 score: 2.7
IPR005746	Thioredoxin	TIGRFAMs	TIGR01068	TIGR01068	coord: 80..178 score: 3.5
IPR012336	Thioredoxin-like fold	GENE3D	3.40.30.10		coord: 67..180 score: 2.5
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 62..180 score: 1.66
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 76..177 score: 2.2
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 64..180 score: 14
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 96..114 scor
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 103..112 score: 2.4E-9coord: 95..103 score: 2.4E-9coord: 143..154 score: 2.
None	No IPR available	PANTHER	PTHR10438:SF290	SUBFAMILY NOT NAMED	coord: 2..180 score: 2.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0005515	protein binding