Spo21966.1 (mRNA) | SpinachBase

Overview


Name	Spo21966.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Arabinogalactan protein
Location	SpoScf_00297 : 173611 .. 177439 (+)
Sequence length	1200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCCCACCCGGTCAAGAGTACTCCATATAAAATTATAAATACGTCTAATCAATAAAATGCGGTATTTCAAACTGCAAAGAGGTAAATTGATCTGTCCAGAAGCTGGTGGAATCTCCCCAAAACAACCCAAATTGTTCATCGAATCAACGTACTCCGTATTATCACAAGAGAGAATAATCATCAAAAAATTAGAATACAGAAAAAATGGCTCAAAACCCTCAATTGTTTCCTAATGGTATGCCTGTCCCTTTTTATGCCGAATTGTTTGTGTTGGCTAGAGATGGCGTTGAGTTTGAGGTCGATAAGATTCCTGGGTTAGCATATTCTCTCTATATTCCTTGCTTAATTTTTCGTATTTGTTGCTTTCTGACAAATTTGATTGTTTTTCTTTCGAATTTTCAGTTTTCTTCTAATTTGATTATTTGGGTTTATTTTTTTAAATTAGGGTTTGGTTTATTTGTTGCAAATTGCTGTGATTATGGCATCAAATTGAGCATTTTCATTCAAATTTTCGCTCAATTTCTTGTTTAATCGTGCGAGGTTTTGTGTTATTCTGTTTAGGTATCGGTTTTTATGTTGCGAATATGCATGATCACATTGGTTTACCCATTTTTCTTTGGTAATTTAACGGACTATATCCCCTTTCTTCTGGGTTTGGTATTGAATTGGGAGTTTGATTGGTCTCTCGTCAGCAGAGTTGTTTATTGTTTGAAGAGAATTCAAAATTTTAATTTTCTAAACAGTGGACTTTCTTCACTTTTGGAGGATCAAAATTGGATTAAGCAATAGGAGATAAAATATGATAGGTAAACAGAAGGGGTTGGATGAAGAGTTAGTCGAGTTTACTTGTGTGCTTTCAGCTCTATATTCGGGGGCGATTTTGAAGGTGATTCGCTTGAGCTCCAATGTGGCATTATTCCAAAGTCATATTTTAGGAGATATCCTTCAGAAGCATTTCTGGCTAGCAAAATATAAGTAGTACATTGGTGTTTCAGTTTGTATATGGATTTCCTTGAAAGACTTTGTGAGTTTTTGTTATTCTTAGCCTTATAAGAAGAATATTTTAGGTTCACACGTCTAAGTTCTAACTTTAGGATCTTAGTCATGTTAGTAACCAAACCATTAATGCAGTGGAGTGATAACTTAATATAGTCGTCCTGTTTGGATTGTAACCTTCTCTCCAGAACTCGTGTTTTGAGCTGTTTGTTCCACCTACAGTAGTACAGTGTACCATTATTATTATTCGACTTAGACATTTACAAACAATCATGTACCACAATCAAGTACCTAGGGGCATCCGGTAGAGCTAAAGAACAACGCACTCATTTGCATATGTGCAGGTTCATAATCAGGTGTTTGTGTCATTAGTTTCTGAGTGCCTTCGTGATATTAGTAACTAAATTTAATCTTATAATCCTGCCTTCAAACTTCTTTTCTGGACATCTGAAAGAATTTGTTATGGCTTTAAGCTATGAATCAGCATAGTTTAGACATCAAAATGAGCAGATTACAAGGAAGAAGGTGATGCTTTTGATTGATGATCTGGAATTACAGCAAAATGTAAAGATGTTCAAGCATCCGAGAGGCTTGGTTTTCTCCCAATTGAACTCTTAAAAGTTCAATACAATTCTCATTAGTATTCAACATAACTTCCCCAATTCACTCTATAATATGCTCTATATGTGTAGTGATAAACTCCATAGCTTATTCCCTTAACTATCCATAACTAAGTTATTACCTAGAGTCCCCCNCCCCCACACACACACAATATCAGTTCATTGCATTTTTAACGGGTGCTACTGTATGTAATAGTCTTGGCAGTTGGCTCTTAGGTACAAAAACTTATGAAGATCCCCTCACTTTATAATAGAAGATGTATCCTTCTGGCAAAAAATAATAATAATCATACTAGTGATGTCTGGAAAAAATTCATGTTTTCTAAAACTGTAGTGCATCATTTTAGTGGAAGGCACAGCTGTTAGAAAATTTTAGTAAAACCATGTTAAATCCTTCAATAATAAGGTCTAAGAAAGTGCGACAATTACTTTTAGGTGGAGGGAGTAACATTTATTCACCAAGTTTTTATCTGTACATGCACAGAACGGAAAGAGGTAGATGGAATTATATTTTGATGTTTGTTATGTAGGATTTGCTAAATTGATGGATAAACAACGAACATAGCTTTAGGGAAAAGTTATCCAGCTTTAAAATTGTAGGCTCTTTTGATTCTGCAACTATTACTCCGTGTTCATGTTGTTAACAATATTGATTATGCATTATTGTTCGTCTCACTTGTGTTGTACTCCTGGCTTCTAGGAGCGGGAAAGTGAAGGCTAAGGGGACTGTCTACTTGTCAAATGTGCGCATGGTATTTGTCGCAAGCAAGCCCGTTGGGAATTTTTATGCATTTGATATGCCTCTGGTATGCATCTTTTCCATTGTCAATTATTCGTGTTGCATTCTCCCTTTCTAGCTTCATCCGAAAAAACAACACAAACTTACTTTCTGTAAGTGTCCAGCAATGTCTCTTATCTTTCTGTAAGACATGCCAAAGCAATGTCTTGTAAGTTGTCACAGTAGACTGTCTTTGGTACAGCTTTGCTATACCAATTTCAAACCCCTTTTCTTCCGCCCCCTTAGAGATTTTTGTAGTGGATTCAGTGCCAAGTGTTTCTCCCTTGGTAAACTAAAGTAACTTATGCTATTAACGTATATGCAAAAAGAAGCATTCTCTTTTTGATTTGGCATTTAAAAGAATATGACTTATCCCACGAAAAAGCAGGAGACTTATTATTTTTTGTATTTTATACTCCGTATTTTGCTGGTTTACACTTTTACCCCATGGTGATGGTCTACATTGCCTTTCTGCAGTTGCATGTTCATAGTGAGAAATTCAACCAACCAATATTTCATTGCAACAACATTTCAGGACATGTGGAACCAGTGAGTTTTCAAACTATCAACTTCCACGATGGTTACACTCTTTGGAGTTAGGAGTTTTGGACATTCCTTGATATTTGAATGTTGAAACTTGCAGGTTATTCCTGAAAATGAGAATAGGGCTCTATACTCAACCCACTCATTCAAGATTTTGTTCAAGGAGGGCGGTTGTGGTACCTTTATCCCCCTGTTTTTTAACTTAATCAATTCTGTAAGGCGGTACAATCAACAGGCTGCACCTGCCCCAGAGCCTCGTGTTGATCCTCTACGTGCAGCACAAACTCCTGTGGATGAAATGATGAGACATGCGTAAGTATATTGTCAATTTCTAAGCTTTTAAGATAACTGAAGGACTTTGTGGTTGTTTACAAAATGGGAACTTCATTTGTGCAGGTATGTTGATCCAAATGATCCTACAAAGATCTTTTTGCAGCAACCTACACCGGAGTCAAACCTGAGGCGGCGTACATACCATTCACAAGGCGACAACACCATGTAGTACTACCTTGTTTCTTCTGTTGTGGAAATCATACCAAAGTAAAGAAAAGAACAATATGTTTTCAGTTTGTATCCATAGATAAGATGCTCTCCTGGCTTGTCAATACCTTTTTTATACATATTTTTATTTTCATCTTTTTGGTGTCTGAACCTTGTATTATACTCAGATTGTAGGCTCTAATATAATAAAAGTTGTCTTGTATATTCTGTTGTACGAGTTTTTAGTTGTTTGGATATGAACTGGTGATTCAAATAAATATGATCTTCTCTACTAATTGAAGACGCCGAGAAGTTGCGTCTGCTTGGCATCAGATAACACAAGTCTGCGCATACGCATGAGGTTGTATGCTTCTCAAACACTAAAAACAGTACTTATATTACAAATTAC

mRNA sequence

CCCGCCCCACCCGGTCAAGAGTACTCCATATAAAATTATAAATACGTCTAATCAATAAAATGCGGTATTTCAAACTGCAAAGAGGTAAATTGATCTGTCCAGAAGCTGGTGGAATCTCCCCAAAACAACCCAAATTGTTCATCGAATCAACGTACTCCGTATTATCACAAGAGAGAATAATCATCAAAAAATTAGAATACAGAAAAAATGGCTCAAAACCCTCAATTGTTTCCTAATGGTATGCCTGTCCCTTTTTATGCCGAATTGTTTGTGTTGGCTAGAGATGGCGTTGAGTTTGAGGTCGATAAGATTCCTGGGAGCGGGAAAGTGAAGGCTAAGGGGACTGTCTACTTGTCAAATGTGCGCATGGTATTTGTCGCAAGCAAGCCCGTTGGGAATTTTTATGCATTTGATATGCCTCTGTTGCATGTTCATAGTGAGAAATTCAACCAACCAATATTTCATTGCAACAACATTTCAGGACATGTGGAACCAGTTATTCCTGAAAATGAGAATAGGGCTCTATACTCAACCCACTCATTCAAGATTTTGTTCAAGGAGGGCGGTTGTGGTACCTTTATCCCCCTGTTTTTTAACTTAATCAATTCTGTAAGGCGGTACAATCAACAGGCTGCACCTGCCCCAGAGCCTCGTGTTGATCCTCTACGTGCAGCACAAACTCCTGTGGATGAAATGATGAGACATGCGTATGTTGATCCAAATGATCCTACAAAGATCTTTTTGCAGCAACCTACACCGGAGTCAAACCTGAGGCGGCGTACATACCATTCACAAGGCGACAACACCATGTAGTACTACCTTGTTTCTTCTGTTGTGGAAATCATACCAAAGTAAAGAAAAGAACAATATGTTTTCAGTTTGTATCCATAGATAAGATGCTCTCCTGGCTTGTCAATACCTTTTTTATACATATTTTTATTTTCATCTTTTTGGTGTCTGAACCTTGTATTATACTCAGATTGTAGGCTCTAATATAATAAAAGTTGTCTTGTATATTCTGTTGTACGAGTTTTTAGTTGTTTGGATATGAACTGGTGATTCAAATAAATATGATCTTCTCTACTAATTGAAGACGCCGAGAAGTTGCGTCTGCTTGGCATCAGATAACACAAGTCTGCGCATACGCATGAGGTTGTATGCTTCTCAAACACTAAAAACAGTACTTATATTACAAATTAC

Coding sequence (CDS)

ATGGCTCAAAACCCTCAATTGTTTCCTAATGGTATGCCTGTCCCTTTTTATGCCGAATTGTTTGTGTTGGCTAGAGATGGCGTTGAGTTTGAGGTCGATAAGATTCCTGGGAGCGGGAAAGTGAAGGCTAAGGGGACTGTCTACTTGTCAAATGTGCGCATGGTATTTGTCGCAAGCAAGCCCGTTGGGAATTTTTATGCATTTGATATGCCTCTGTTGCATGTTCATAGTGAGAAATTCAACCAACCAATATTTCATTGCAACAACATTTCAGGACATGTGGAACCAGTTATTCCTGAAAATGAGAATAGGGCTCTATACTCAACCCACTCATTCAAGATTTTGTTCAAGGAGGGCGGTTGTGGTACCTTTATCCCCCTGTTTTTTAACTTAATCAATTCTGTAAGGCGGTACAATCAACAGGCTGCACCTGCCCCAGAGCCTCGTGTTGATCCTCTACGTGCAGCACAAACTCCTGTGGATGAAATGATGAGACATGCGTATGTTGATCCAAATGATCCTACAAAGATCTTTTTGCAGCAACCTACACCGGAGTCAAACCTGAGGCGGCGTACATACCATTCACAAGGCGACAACACCATGTAG

Protein sequence

MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASKPVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGGCGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQQPTPESNLRRRTYHSQGDNTM

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo21966	Spo21966	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo21966.1	Spo21966.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21966.1.exon.1	Spo21966.1.exon.1	exon
Spo21966.1.exon.2	Spo21966.1.exon.2	exon
Spo21966.1.exon.3	Spo21966.1.exon.3	exon
Spo21966.1.exon.4	Spo21966.1.exon.4	exon
Spo21966.1.exon.5	Spo21966.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21966.1.utr5p.1	Spo21966.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21966.1.CDS.1	Spo21966.1.CDS.1	CDS
Spo21966.1.CDS.2	Spo21966.1.CDS.2	CDS
Spo21966.1.CDS.3	Spo21966.1.CDS.3	CDS
Spo21966.1.CDS.4	Spo21966.1.CDS.4	CDS
Spo21966.1.CDS.5	Spo21966.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo21966.1.utr3p.1	Spo21966.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo21966.1 vs. NCBI nr
Match: gi|902239196|gb|KNA25497.1| (hypothetical protein SOVF_006340 [Spinacia oleracea])

HSP 1 Score: 421.4 bits (1082), Expect = 8.900e-115
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK
Sbjct: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG
Sbjct: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ
Sbjct: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTPESNLRRRTYHSQGDNTM 202
           QPTPESNLRRRTYHSQGDNTM
Sbjct: 181 QPTPESNLRRRTYHSQGDNTM 201

[Close]

BLAST of Spo21966.1 vs. NCBI nr
Match: gi|731346263|ref|XP_010684364.1| (PREDICTED: uncharacterized protein LOC104898932 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 389.8 bits (1000), Expect = 2.900e-105
Identity = 184/201 (91.54%), Postives = 191/201 (95.02%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MAQNPQLF NGMPVPFY ELFVLARDGVEFEVDKI GSGKVKAKGT+YLSNVRMVFVASK
Sbjct: 1   MAQNPQLFSNGMPVPFYGELFVLARDGVEFEVDKISGSGKVKAKGTIYLSNVRMVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           P GNFYAFDMPLLHVH+EKFNQPIF CNNISG+VEPV+PE ENRALYSTHSFKILFKEGG
Sbjct: 61  PAGNFYAFDMPLLHVHAEKFNQPIFQCNNISGNVEPVVPETENRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTFIPLFFNLINSVR+YNQ  AP  EPRVDPLRAAQTPVDEMMRHAYVDPNDP+KI+LQ
Sbjct: 121 CGTFIPLFFNLINSVRQYNQHVAPVSEPRVDPLRAAQTPVDEMMRHAYVDPNDPSKIYLQ 180

Query: 181 QPTPESNLRRRTYHSQGDNTM 202
           QPTPESNLRRRTYHSQGDNTM
Sbjct: 181 QPTPESNLRRRTYHSQGDNTM 201

[Close]

BLAST of Spo21966.1 vs. NCBI nr
Match: gi|743819723|ref|XP_011020947.1| (PREDICTED: UPF0664 stress-induced protein C29B12.11c isoform X1 [Populus euphratica])

HSP 1 Score: 354.0 bits (907), Expect = 1.700e-94
Identity = 167/202 (82.67%), Postives = 182/202 (90.10%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MA NPQL+PNGMPVPF  ELFVLARDGVEFEVDKIPG GKVKAKGT+YLSN+RMVFVAS+
Sbjct: 1   MALNPQLYPNGMPVPFENELFVLARDGVEFEVDKIPGCGKVKAKGTIYLSNIRMVFVASQ 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNFYAFDMPLL +H EKFNQPIFHCNNISG VEPV+PE ENRALYSTHSFKILFKEGG
Sbjct: 61  PVGNFYAFDMPLLFIHEEKFNQPIFHCNNISGFVEPVVPETENRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTF+PLF NLI++VR+YNQQ   AP P +DPL+AAQTPVDEMMRHAYVDPNDPT+IFLQ
Sbjct: 121 CGTFVPLFLNLISAVRQYNQQMNSAPRPWIDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTPESNLRRRTYH-SQGDNTM 202
           QPTP+S LRRRTY  S  + TM
Sbjct: 181 QPTPQSELRRRTYQPSSAERTM 202

[Close]

BLAST of Spo21966.1 vs. NCBI nr
Match: gi|641842245|gb|KDO61152.1| (hypothetical protein CISIN_1g028854mg [Citrus sinensis])

HSP 1 Score: 348.2 bits (892), Expect = 9.600e-93
Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MA NPQLFPN MPVPF  ELFVLARDGVEF VDKIPG+ +VKA+GTVYLSN+R+VFVASK
Sbjct: 1   MALNPQLFPNWMPVPFTNELFVLARDGVEFHVDKIPGTNQVKARGTVYLSNIRVVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNF AFDMPLL++H EKFNQPIFHCNNISG VEPVIPENE+RALYSTHSFKILFKEGG
Sbjct: 61  PVGNFVAFDMPLLYIHDEKFNQPIFHCNNISGFVEPVIPENEHRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTF+PLF NLI+SVR+YN+Q+    EPRVDPL+AAQTPVDEMMRHAYVDPNDPTKIFLQ
Sbjct: 121 CGTFVPLFLNLISSVRQYNRQSNVGTEPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTPESNLRRRTYHSQ 197
           QP  ES LRRRTYHSQ
Sbjct: 181 QPNSESQLRRRTYHSQ 196

[Close]

BLAST of Spo21966.1 vs. NCBI nr
Match: gi|567855533|ref|XP_006420886.1| (hypothetical protein CICLE_v10005917mg [Citrus clementina])

HSP 1 Score: 348.2 bits (892), Expect = 9.600e-93
Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MA NPQLFPN MPVPF  ELFVLARDGVEF VDKIPG+ +VKA+GTVYLSN+R+VFVASK
Sbjct: 1   MALNPQLFPNWMPVPFTNELFVLARDGVEFHVDKIPGTNQVKARGTVYLSNIRIVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNF AFDMPLL++H EKFNQPIFHCNNISG VEPVIPENE+RALYSTHSFKILFKEGG
Sbjct: 61  PVGNFVAFDMPLLYIHDEKFNQPIFHCNNISGFVEPVIPENEHRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTF+PLF NLI+SVR+YN+Q+    EPRVDPL+AAQTPVDEMMRHAYVDPNDPTKIFLQ
Sbjct: 121 CGTFVPLFLNLISSVRQYNRQSNVGTEPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTPESNLRRRTYHSQ 197
           QP  ES LRRRTYHSQ
Sbjct: 181 QPNSESQLRRRTYHSQ 196

[Close]

BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2X9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006340 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 6.200e-115
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK
Sbjct: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG
Sbjct: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ
Sbjct: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTPESNLRRRTYHSQGDNTM 202
           QPTPESNLRRRTYHSQGDNTM
Sbjct: 181 QPTPESNLRRRTYHSQGDNTM 201

[Close]

BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXX7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163760 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 2.000e-105
Identity = 184/201 (91.54%), Postives = 191/201 (95.02%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MAQNPQLF NGMPVPFY ELFVLARDGVEFEVDKI GSGKVKAKGT+YLSNVRMVFVASK
Sbjct: 1   MAQNPQLFSNGMPVPFYGELFVLARDGVEFEVDKISGSGKVKAKGTIYLSNVRMVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           P GNFYAFDMPLLHVH+EKFNQPIF CNNISG+VEPV+PE ENRALYSTHSFKILFKEGG
Sbjct: 61  PAGNFYAFDMPLLHVHAEKFNQPIFQCNNISGNVEPVVPETENRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTFIPLFFNLINSVR+YNQ  AP  EPRVDPLRAAQTPVDEMMRHAYVDPNDP+KI+LQ
Sbjct: 121 CGTFIPLFFNLINSVRQYNQHVAPVSEPRVDPLRAAQTPVDEMMRHAYVDPNDPSKIYLQ 180

Query: 181 QPTPESNLRRRTYHSQGDNTM 202
           QPTPESNLRRRTYHSQGDNTM
Sbjct: 181 QPTPESNLRRRTYHSQGDNTM 201

[Close]

BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
Match: V4SB17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005917mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.700e-93
Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MA NPQLFPN MPVPF  ELFVLARDGVEF VDKIPG+ +VKA+GTVYLSN+R+VFVASK
Sbjct: 1   MALNPQLFPNWMPVPFTNELFVLARDGVEFHVDKIPGTNQVKARGTVYLSNIRIVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNF AFDMPLL++H EKFNQPIFHCNNISG VEPVIPENE+RALYSTHSFKILFKEGG
Sbjct: 61  PVGNFVAFDMPLLYIHDEKFNQPIFHCNNISGFVEPVIPENEHRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTF+PLF NLI+SVR+YN+Q+    EPRVDPL+AAQTPVDEMMRHAYVDPNDPTKIFLQ
Sbjct: 121 CGTFVPLFLNLISSVRQYNRQSNVGTEPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTPESNLRRRTYHSQ 197
           QP  ES LRRRTYHSQ
Sbjct: 181 QPNSESQLRRRTYHSQ 196

[Close]

BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
Match: A0A067FCI8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028854mg PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 6.700e-93
Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MA NPQLFPN MPVPF  ELFVLARDGVEF VDKIPG+ +VKA+GTVYLSN+R+VFVASK
Sbjct: 1   MALNPQLFPNWMPVPFTNELFVLARDGVEFHVDKIPGTNQVKARGTVYLSNIRVVFVASK 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVGNF AFDMPLL++H EKFNQPIFHCNNISG VEPVIPENE+RALYSTHSFKILFKEGG
Sbjct: 61  PVGNFVAFDMPLLYIHDEKFNQPIFHCNNISGFVEPVIPENEHRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTF+PLF NLI+SVR+YN+Q+    EPRVDPL+AAQTPVDEMMRHAYVDPNDPTKIFLQ
Sbjct: 121 CGTFVPLFLNLISSVRQYNRQSNVGTEPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTPESNLRRRTYHSQ 197
           QP  ES LRRRTYHSQ
Sbjct: 181 QPNSESQLRRRTYHSQ 196

[Close]

BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
Match: R9W0R7_CENER (Putative arabinogalactan protein 5 OS=Centaurium erythraea GN=AGP5 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.100e-92
Identity = 160/196 (81.63%), Postives = 179/196 (91.33%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGSGKVKAKGTVYLSNVRMVFVASK 60
           MA NPQLF NG+P+PF +E+FVL RDGVEFE+DKIPGSG VKAKGT+YLSNVRMVFVA +
Sbjct: 1   MALNPQLFSNGLPIPFVSEMFVLTRDGVEFEIDKIPGSGHVKAKGTIYLSNVRMVFVAKQ 60

Query: 61  PVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKEGG 120
           PVG F+AFD+PLL+V +EKFNQPIFHCNNISG V+PV+P+ ENRALYSTHSFKILFKEGG
Sbjct: 61  PVGXFFAFDLPLLYVRAEKFNQPIFHCNNISGFVDPVVPDGENRALYSTHSFKILFKEGG 120

Query: 121 CGTFIPLFFNLINSVRRYNQQAAPAPEPRVDPLRAAQTPVDEMMRHAYVDPNDPTKIFLQ 180
           CGTFIPLFFNLI SVRRYNQ  + APEPRVDPL+AAQTPVDEMMRHAYVDPNDPT+IFLQ
Sbjct: 121 CGTFIPLFFNLIESVRRYNQHMSGAPEPRVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTPESNLRRRTYHSQ 197
           QPTPES +RRRTY  +
Sbjct: 181 QPTPESQMRRRTYRPE 196

[Close]

BLAST of Spo21966.1 vs. TAIR (Arabidopsis)
Match: AT5G11680.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 328.2 bits (840), Expect = 3.600e-90
Identity = 157/202 (77.72%), Postives = 175/202 (86.63%), Query Frame = 1


		  
Query: 1   MAQNPQLFPNGMPVPFYAELFVLARDGVEFEVDKIPGS--GKVKAKGTVYLSNVRMVFVA 60
           MA NPQL PNGMPVPF  E+FVL RDGVEFEVDKIPG   G VKAKG +YLSN+RMVFV+
Sbjct: 1   MALNPQLLPNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFVS 60

Query: 61  SKPVGNFYAFDMPLLHVHSEKFNQPIFHCNNISGHVEPVIPENENRALYSTHSFKILFKE 120
           SKPV NF AFDMPLL++H+EKFNQPIFHCNNI+G VEPV+PENE+RALYSTHSFKILFKE
Sbjct: 61  SKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNIAGQVEPVVPENEHRALYSTHSFKILFKE 120

Query: 121 GGCGTFIPLFFNLINSVRRYNQQAAPAPE-----PRVDPLRAAQTPVDEMMRHAYVDPND 180
           GGCGTF+PLF NLI+SVR+YN+Q   A E     P VDPL+AAQTPVDEMMRHAYVDPND
Sbjct: 121 GGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPHVDPLQAAQTPVDEMMRHAYVDPND 180

Query: 181 PTKIFLQQPTPESNLRRRTYHS 196
           PT+I+LQQP+ ES LRRR YHS
Sbjct: 181 PTRIYLQQPSGESQLRRRAYHS 202

The following BLAST results are available for this feature:

BLAST of Spo21966.1 vs. NCBI nr
BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
BLAST of Spo21966.1 vs. ExPASy Swiss-Prot
BLAST of Spo21966.1 vs. TAIR (Arabidopsis)

BLAST of Spo21966.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902239196\|gb\|KNA25497.1\|	8.9e-115	100.	hypothetical protein SOVF_0063...	[more]
gi\|731346263\|ref\|XP_010684364.1\|	2.9e-105	91.5	PREDICTED: uncharacterized pro...	[more]
gi\|743819723\|ref\|XP_011020947.1\|	1.7e-94	82.6	PREDICTED: UPF0664 stress-indu...	[more]
gi\|641842245\|gb\|KDO61152.1\|	9.6e-93	84.1	hypothetical protein CISIN_1g0...	[more]
gi\|567855533\|ref\|XP_006420886.1\|	9.6e-93	84.1	hypothetical protein CICLE_v10...	[more]

BLAST of Spo21966.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S2X9_SPIOL	6.2e-115	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BXX7_BETVU	2.0e-105	91.5	Uncharacterized protein OS=Bet...	[more]
V4SB17_9ROSI	6.7e-93	84.1	Uncharacterized protein OS=Cit...	[more]
A0A067FCI8_CITSI	6.7e-93	84.1	Uncharacterized protein OS=Cit...	[more]
R9W0R7_CENER	1.1e-92	81.6	Putative arabinogalactan prote...	[more]

BLAST of Spo21966.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo21966.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G11680.1	3.6e-90	77.7	FUNCTIONS IN: molecular_functi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011993	PH domain-like	unknown	SSF50729	PH domain-like	coord: 6..128 score: 5.29
None	No IPR available	PANTHER	PTHR31606	FAMILY NOT NAMED	coord: 2..199 score: 4.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane