Spo22276.1 (mRNA)

Overview
NameSpo22276.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 6881719 .. 6886185 (+)
Sequence length836
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGGGAAATAGGAGAAATCGAAATCGAACAATGGCGGACCTCTTCTCATAAACATTTCATTTGATTAGGGTCAGTCAGATTTCCAGAACTAAAAATCCCCAGAAACAAATTACCCAGTAGAGAGAGAAAGTTATGGGATACGTTTTTAGAGTAAGGCTGGCATCATTCTTCGCAGGCGCAGCAGTGGCCTCATCTGCTGGTCTTTACTTCCTTTACCAGGATTACAAGGTTGCCCATCATTCCATCTCTGACCAGGTTTTTCTCTCTCATTTCTTTTATCAATTTCAATAATGGAATGAATTTTTGTAACCCTTTTGTATTGTGAGATAAATGTAATTGGTAATTTTTGATGGGTTTTTTTAATTGTGATTTTGGAAAGTTTGCCTAAAATTTGTTTAATGTAGGAAATTATTGCCCTAAATTTGCAATTGGGGATTCGTCAGTTTTTCTATTGAAGTTGGAATTGTGTGATTTAGACTAGTAATCTATTTATTTGGGAGGTTTTGTTTGACTATTGGATTATTAACGAAATGAACATAGAATTTGGTGATTTTATGGTTGTGATTGGCACTTGGCAGGCCAGGCACTGGTTGAAAGATGAGGAAAAACAGAACTTGTTATACAGTATAATTAGAAGCTTGTAGCCATGTAGGTTAAAGGTCTTTTTTGGGAAGCAATATCATTTATAGTCTTCACTGATCAGGGCCAAGGTAACATGCATTTTGATTCTTGAAAGTAGGCGATTTTCTGATGGGTTGTTGTTTCTCTTATTTCTGTTGAAGGGTTTTTTGAAGTGGAGGAGATGCTTAGGTAGTTCCATAGTTTGGAGGTTCTTTAATTAGAACATTGTTTCAAGAGGTGACAAGGTTTAAATGGAGACTGTTGTATAGGTTATTAGGATGTAAAATTTTTAGTTTAGTTTTGTTGATGACTATTACTATTACTCTATTGGTATAGGCTTTTTAGGATTCTGGAGTGGCTTGGTAGGTCATCAATTGTGCTCGGTATCTTATATCTCTCTCTCTCTCTCTCCCAACTTTTACCTAGATTAGCTCTAATTTGGAAGCAACTGAAGAGGGTCTAGTTTGTATTTCGGACATCACGGTCTTGTTCACTTGGATTCAAGATCTTTCTTTGTGATAGCTATGACCTCTATTTCATGTTCAGTCCAAGTTTGTTTCATGTTCCTTGTTCAGTCCAAGTTTGTGATAGCTATGACCTCTATTGGAAGCAACTGACTATGATTGATTGATGAAAGTGCAGTCCAAGTTCGTCTCATGTTCCTTGTACAATCTTGGCCTATTATTCATTAATGACTTTTGGCAAGCTTTTTCTTTTTGGCTGATAGCTGACTCCAAAAATATCCTGCACTACACAAATGCCTGATTTGCTATATCCGTTTTCAACTTATCATGGCTAAATTGCCAGTTTGCCATTAGCTCGCTGCTTTCCTTCTCATAAGTCGATGGCTTCTTACCTATTATGTCATTTGGCAAGTATACATGTCAATGCTGTCAAATATAGGAGAACTCGATTCCTTCAATGACTTGTCTAGTATACACCTATGATTACTTGATAAGTTGATATTGCTATATTGGGTTTTCAGTTTAAAAAGAATAAATTAAATACCTTTACCTGCATACCATTGGCCATATTTGAAGTTGTCATGTTTTCTCTTCTCTTTAATTCTATTTTGCAGTAATGTCTTCTTACCTTGTGCGTCACTGACTCACCAATGAGAACATGTGTTTTTAAAGTTGATAAACGTTTGATTGCGTATCAATAATCATGATTGATTTATAATGCTTGTAGAATCGTGTATTAGGAATCGCTACGAAGTATAGACTATAGACAAAATTAGTACTAGGTGTCTAGTTTTCATATGCTTGTGACGTTGTGAGTTGTGATATCTGTATGATTGTGAGTTGTGATATCAATGCTGTGATTTTGTTATGTGTTGTTATTTGCATTTGTCACTAGAAAATAATTCATTATAGCATTTTGAAGATTCTTCTGGGTTTTGGTCACTTGTGGATCTGTTTTGTTTCTAAGGTTATATACTTGTAGTCTTTTACTTGCTGGCAACCTCCACTTTCCTGGTTTTGTTAGTTTTGAGTATTCAATTTGTGTTGCACTGAGATAAAATTACAATTTTCTAAATTTGACGGCACGATATGTGATTTCTATTGATGTTCGTGCATGTGAACTCTGTTTATTCAGCTGCCACAAATAAAGCTTTTGAGTTTGCTTGGCTTCCTTACCCATATGGTACTTGCCAAGTAATATATTTGGCCTTCTCCCAGTTATAGATCAATGATAAATGATACTAGCATTTTCCACTAATGTATGAAAACAAATACGAGTACTATAATTCACCAAATTTAAATACCTTCTATGCTTTGTTAGGTGTCTGTGAAGGAGTTGATCATATTGACTGAATATTTTATTCTGTGTAACTACTACTTCAATCTCCATGAGTACTTGAGTAGCAATCCGTCTGCATTGTGCAATATGATTTATTATTGATAGGAAAGTAGATGGCATTCACTGGTTGTGGCGTTGAGTTTATTTGCACTTCCTAACAAGTCATGATTAGCAAATGGAGGACTATATGGACATTTTTACTCTTTCCCACTTCTACTTGGCTATTAGCACCCCTTCCTCTCACCAAACACATAAAAAAAGACATTTTCCCTCTTGACTACTGCGAAAATAATTTTGTTTTATTTAGATTTATTTTTAAAAAGCATAACAGAGAGTCGGACACAAATCAGACAAGAGGGGCAGGGGGGGGTCTAGAAACTGCTAAATTTGTTACTCTGAAGCTTCTTTGAACTACAATCATTATGAAAATCTCCGTTGATGGAGAAATTTTGGTTACAGACACAGATTCTTTATTAATGTTGATGCCTCCGTAGACGCTACTATTATAGTGTTTTTACTAAGTTTTTGTATCAAAACCTGTAGGATGGTCTCTATGAAACCTCTTTCATTTGCACAAGGTAGACTCCATTTAGCCCCTTTCTCTGGTTGTTCATTCTTTGCTCTGCAACAGCCAGATATGACCCGCCAACGATAACTGACCTGCAGTGGGATTGATTTAGAGCATAGATTGAGATCAGAGGATTAGCAGGGTGGTTATGGAGACTTGTGGGTCAGCAAAGAAAGAATCGTGGAAAGAGGAGTTGTGGATTTTGTGTTTCAAACTTTATTTATTTATTTCTATATAGATTTATTGAAAAAAACCATCATAATTCAATCATAAACTCGTTTTTGGTCAATAGTTATTATCTCCTTCTCTCCTCCTTTATGACCCTTGATCAGATTAGTAGTTGGGAAAGGTGAGGTATAGCCGTATAGGTATCTTTTCTGTTGCAATAATGGGTGAGTGGAGGGGAAGGATGTACTTTTGGATTTCCTTAGTCTGCACTTAGAATGCGTTATTGCTTTGTACATGTACGTGGTAGAGTCAATCTTATGTTCTTGATGACTTGTAATTGTTGAGTAGTTCCTTATAAGGAGCCATTTCAGACATTTTAACCATATAGCATGCCATTCAGATTTTGACAAGTTGTAAATAAGTTTGTTACAGAGTATCAGTTTTCTTTATAAAGTGACAATGTGTGTCTGAACTTTTTATTTCCTGAAACTTAATTTTTATGGTGAAAAAACCGAAAGTTTAGTACATGTACGTGTTGGTAGGAAACTGATGTCCTGAATGACATGCAGAGAAGTTTCTTAGAAACGGCCATTATAGACTTCTATTTTAGCCATGAGTCCATGACCTTTTGATAATCTTGCATCTGTATTAATATGAAAGAAGTTGCCATTTAGTTTAATGATAGGTCATGCTCTTACACTCAACCTTTTCTTTTTGCTTCTTTAGATGAAACTTCTGCACGATTCTCTGGATAGACGTGTCTCGGCTCTTGAGAGTTTGAAAGAAACTGAAGCTCCTCAACAACAAGTGGAAGCAACAGAATAGACATTTTAGAGGTTCTTTTTTTTGACTGATTTTGATGTTGTACACTCTCAGATGCAGCGATTCTCCTTGAGTATCATGTCAAAGAGAGGCTCGTAGAAATACCCGGAGTATAAATAATACACGACTTAAATTTCTCTATGTTAATCAGGCAGTTGCGTTTATGCTTCTGTTTTTAACTCTTGTGAAATGGTGGTTGAAGGCTGTTATTGACAGTTGTTTTTCAAAAAATTGCATCTTTGTCCAGCTTTTTTTCTTCTTCTTGTTCATTGTAGTCTGGTGTTCTAACCAAGCTGAAGTTTATGCCGAGACTTAACCAGTGGCTCACACCGTGGTCAGGCACCAGGCTCAGAGATGCATTGGCTTCACCTGGCCTCATTTCCTTGCTCTCGTGCTCACGAGAGTATATCAGTGAAATGGACACAACCCGATACGGTCCATAATAGCTTGCGTTCAAATGGACGCAAGTGATCTCTATTGATAC

mRNA sequence

TAAGGGAAATAGGAGAAATCGAAATCGAACAATGGCGGACCTCTTCTCATAAACATTTCATTTGATTAGGGTCAGTCAGATTTCCAGAACTAAAAATCCCCAGAAACAAATTACCCAGTAGAGAGAGAAAGTTATGGGATACGTTTTTAGAGTAAGGCTGGCATCATTCTTCGCAGGCGCAGCAGTGGCCTCATCTGCTGGTCTTTACTTCCTTTACCAGGATTACAAGGTTGCCCATCATTCCATCTCTGACCAGATGAAACTTCTGCACGATTCTCTGGATAGACGTGTCTCGGCTCTTGAGAGTTTGAAAGAAACTGAAGCTCCTCAACAACAAGTGGAAGCAACAGAATAGACATTTTAGAGGTTCTTTTTTTTGACTGATTTTGATGTTGTACACTCTCAGATGCAGCGATTCTCCTTGAGTATCATGTCAAAGAGAGGCTCGTAGAAATACCCGGAGTATAAATAATACACGACTTAAATTTCTCTATGTTAATCAGGCAGTTGCGTTTATGCTTCTGTTTTTAACTCTTGTGAAATGGTGGTTGAAGGCTGTTATTGACAGTTGTTTTTCAAAAAATTGCATCTTTGTCCAGCTTTTTTTCTTCTTCTTGTTCATTGTAGTCTGGTGTTCTAACCAAGCTGAAGTTTATGCCGAGACTTAACCAGTGGCTCACACCGTGGTCAGGCACCAGGCTCAGAGATGCATTGGCTTCACCTGGCCTCATTTCCTTGCTCTCGTGCTCACGAGAGTATATCAGTGAAATGGACACAACCCGATACGGTCCATAATAGCTTGCGTTCAAATGGACGCAAGTGATCTCTATTGATAC

Coding sequence (CDS)

ATGGGATACGTTTTTAGAGTAAGGCTGGCATCATTCTTCGCAGGCGCAGCAGTGGCCTCATCTGCTGGTCTTTACTTCCTTTACCAGGATTACAAGGTTGCCCATCATTCCATCTCTGACCAGATGAAACTTCTGCACGATTCTCTGGATAGACGTGTCTCGGCTCTTGAGAGTTTGAAAGAAACTGAAGCTCCTCAACAACAAGTGGAAGCAACAGAATAG

Protein sequence

MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLKETEAPQQQVEATE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo22276Spo22276gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo22276.1Spo22276.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22276.1.exon.1Spo22276.1.exon.1exon
Spo22276.1.exon.2Spo22276.1.exon.2exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22276.1.utr5p.1Spo22276.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22276.1.CDS.1Spo22276.1.CDS.1CDS
Spo22276.1.CDS.2Spo22276.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22276.1.utr3p.1Spo22276.1.utr3p.1three_prime_UTR


Homology
[Close]
BLAST of Spo22276.1 vs. NCBI nr
Match: gi|902187979|gb|KNA11030.1| (hypothetical protein SOVF_138900 [Spinacia oleracea])

HSP 1 Score: 137.1 bits (344), Expect = 1.200e-29
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK
Sbjct: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60

Query: 61 ETEAPQQQVEATE 74
          ETEAPQQQVEATE
Sbjct: 61 ETEAPQQQVEATE 73
[Close]
BLAST of Spo22276.1 vs. NCBI nr
Match: gi|731371789|ref|XP_010666151.1| (PREDICTED: uncharacterized protein LOC104883345 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 113.6 bits (283), Expect = 1.400e-22
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVRLASFFAGAA+AS+AGLY LY+DYK AHHSISDQMKLLHDSLD+RVS+LE LK
Sbjct: 1  MGYVLRVRLASFFAGAAMASTAGLYILYKDYKFAHHSISDQMKLLHDSLDKRVSSLEKLK 60

Query: 61 ETEAPQQQVEATE 74
          ETEAP + VEATE
Sbjct: 61 ETEAP-EHVEATE 72
[Close]
BLAST of Spo22276.1 vs. NCBI nr
Match: gi|657970138|ref|XP_008376806.1| (PREDICTED: uncharacterized protein LOC103439937 [Malus domestica])

HSP 1 Score: 100.1 bits (248), Expect = 1.600e-18
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVRLASFF GAAVAS  GLY L+ DYKVAHHSIS Q+K LH+SLDRR+SALESLK
Sbjct: 1  MGYVLRVRLASFFGGAAVASFLGLYILHNDYKVAHHSISQQVKGLHESLDRRISALESLK 60

Query: 61 ETEAPQQQVEATE 74
           TEAP Q  EA+E
Sbjct: 61 PTEAP-QPAEASE 72
[Close]
BLAST of Spo22276.1 vs. NCBI nr
Match: gi|658016917|ref|XP_008343810.1| (PREDICTED: uncharacterized protein LOC103406599 [Malus domestica])

HSP 1 Score: 99.4 bits (246), Expect = 2.800e-18
Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVR+ASFF GAAVAS  GLY L+ DYKVAHHSIS Q+K LH+SLDRR+SALESLK
Sbjct: 1  MGYVLRVRMASFFGGAAVASFLGLYILHNDYKVAHHSISQQVKGLHESLDRRISALESLK 60

Query: 61 ETEAPQQQVEATE 74
           TEAP Q  EA+E
Sbjct: 61 PTEAP-QPAEASE 72
[Close]
BLAST of Spo22276.1 vs. NCBI nr
Match: gi|694364451|ref|XP_009361295.1| (PREDICTED: uncharacterized protein LOC103951598 [Pyrus x bretschneideri])

HSP 1 Score: 99.0 bits (245), Expect = 3.700e-18
Identity = 55/73 (75.34%), Postives = 61/73 (83.56%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVRLASFF GAAVAS  GLY L+ DYKVAHH+IS Q+K LH+SLDRR+SALESLK
Sbjct: 1  MGYVLRVRLASFFGGAAVASFLGLYILHNDYKVAHHAISQQVKGLHESLDRRISALESLK 60

Query: 61 ETEAPQQQVEATE 74
           TEAP Q  EA+E
Sbjct: 61 PTEAP-QPAEASE 72
[Close]
BLAST of Spo22276.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUU8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138900 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.500e-30
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK
Sbjct: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60

Query: 61 ETEAPQQQVEATE 74
          ETEAPQQQVEATE
Sbjct: 61 ETEAPQQQVEATE 73
[Close]
BLAST of Spo22276.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DZL5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_000280 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.000e-22
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVRLASFFAGAA+AS+AGLY LY+DYK AHHSISDQMKLLHDSLD+RVS+LE LK
Sbjct: 1  MGYVLRVRLASFFAGAAMASTAGLYILYKDYKFAHHSISDQMKLLHDSLDKRVSSLEKLK 60

Query: 61 ETEAPQQQVEATE 74
          ETEAP + VEATE
Sbjct: 61 ETEAP-EHVEATE 72
[Close]
BLAST of Spo22276.1 vs. UniProtKB/TrEMBL
Match: B9I229_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s03000g PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.200e-17
Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVRLASFFAGAA AS AGLY LYQD+KVAH +IS Q++  H+SLDRR+SALE LK
Sbjct: 1  MGYVLRVRLASFFAGAATASFAGLYLLYQDFKVAHDAISQQVESAHESLDRRISALEKLK 60

Query: 61 ETEAPQQQVEATE 74
          ++EAP Q ++ATE
Sbjct: 61 QSEAP-QPLQATE 72
[Close]
BLAST of Spo22276.1 vs. UniProtKB/TrEMBL
Match: M4EJU2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.300e-17
Identity = 51/73 (69.86%), Postives = 57/73 (78.08%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVR+ASFFAGAA AS  GL  LY+DYKVAH SIS Q K  HDSLDRR+SALESL+
Sbjct: 1  MGYVLRVRMASFFAGAATASFIGLSVLYKDYKVAHESISQQAKAFHDSLDRRISALESLR 60

Query: 61 ETEAPQQQVEATE 74
          +TEAPQ     T+
Sbjct: 61 QTEAPQLPETTTD 73
[Close]
BLAST of Spo22276.1 vs. UniProtKB/TrEMBL
Match: A0A078I854_BRANA (BnaA03g12130D protein OS=Brassica napus GN=BnaA03g12130D PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.300e-17
Identity = 51/73 (69.86%), Postives = 57/73 (78.08%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYV RVR+ASFFAGAA AS  GL  LY+DYKVAH SIS Q K  HDSLDRR+SALESL+
Sbjct: 1  MGYVLRVRMASFFAGAATASFIGLSVLYKDYKVAHESISQQAKAFHDSLDRRISALESLR 60

Query: 61 ETEAPQQQVEATE 74
          +TEAPQ     T+
Sbjct: 61 QTEAPQLPETTTD 73
[Close]
BLAST of Spo22276.1 vs. TAIR (Arabidopsis)
Match: AT5G53650.1 (unknown protein)

HSP 1 Score: 94.4 bits (233), Expect = 3.200e-20
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 1 

		  

Query: 1  MGYVFRVRLASFFAGAAVASSAGLYFLYQDYKVAHHSISDQMKLLHDSLDRRVSALESLK 60
          MGYVFRVRLASFFAGAA AS  GL  LY+DYKVAH SIS Q K  HDSLDRR+S LESL+
Sbjct: 1  MGYVFRVRLASFFAGAATASFIGLSVLYKDYKVAHESISQQAKSFHDSLDRRISTLESLR 60

Query: 61 ETEAPQQQVEATE 74
          ++EAP Q  E TE
Sbjct: 61 QSEAP-QLAETTE 72
The following BLAST results are available for this feature:
BLAST of Spo22276.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902187979|gb|KNA11030.1|1.2e-29100.hypothetical protein SOVF_1389... [more]
gi|731371789|ref|XP_010666151.1|1.4e-2283.5PREDICTED: uncharacterized pro... [more]
gi|657970138|ref|XP_008376806.1|1.6e-1876.7PREDICTED: uncharacterized pro... [more]
gi|658016917|ref|XP_008343810.1|2.8e-1875.3PREDICTED: uncharacterized pro... [more]
gi|694364451|ref|XP_009361295.1|3.7e-1875.3PREDICTED: uncharacterized pro... [more]
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BLAST of Spo22276.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QUU8_SPIOL8.5e-30100.Uncharacterized protein OS=Spi... [more]
A0A0J8DZL5_BETVU1.0e-2283.5Uncharacterized protein OS=Bet... [more]
B9I229_POPTR2.2e-1771.2Uncharacterized protein OS=Pop... [more]
M4EJU2_BRARP6.3e-1769.8Uncharacterized protein OS=Bra... [more]
A0A078I854_BRANA6.3e-1769.8BnaA03g12130D protein OS=Brass... [more]
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BLAST of Spo22276.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo22276.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G53650.13.2e-2072.6unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34970FAMILY NOT NAMEDcoord: 2..68
score: 2.4
NoneNo IPR availablePANTHERPTHR34970:SF2SUBFAMILY NOT NAMEDcoord: 2..68
score: 2.4

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009062 fatty acid catabolic process
biological_process GO:0006626 protein targeting to mitochondrion
cellular_component GO:0009507 chloroplast