Spo22550.1 (mRNA)

Overview
NameSpo22550.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description24 kDa RNA binding protein
LocationSpoScf_01922 : 67801 .. 83024 (-)
Sequence length504
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGGGATCAGAAACTTCCGAGTTCTGAAGCTCCTCACTCTCACTTTGTCTTCTTTTTCCCTGGTATGATTCTCTCTTCTGTGTTTTTATTAAAATTAGGGTTATGTTTTTCGCTTGTAATTGTTGAATTAATTAGGGTTGATTTTAGTTGAATTTGCAAATTGATTCCGGACAACAACCTCACTTCTTCCCTGACCTTAAGATTTTGGTGCGTAATCTTCCATTTAATGTTGACAGTGCTGAGCGCGATGGGTTGTTCGGTGCTGCTGGTACCGTTGAAATGGTTGAGGTGAGTTTACGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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GAAAGATAAATCCCAAATCTTTTGCTGGGTTACTTCATTTTCTGTAATTAGGCATTTACCACCCATGCTTGGCTCAGGTTCTCAGGAATGACAGTAAGGTTCTTGTCTCCGATCTCATTAGATATTTCCGACACATTTCCGGATTCCTCATTTTCTTCAGTTGTTACCTTTGCTGGACTTTTTTTTTTCTGACCATTTTTATCCTCATCCCTCATTTTCTCAACCAATCCTGTTTTCTCTCTTCTTAGTTCGTCCTCGTCTAAGCTAGCAACATTTCCCCTGTACTCATCCTCTTCTGCTACATGTCCTGGTGGTACAAAGGCAGTGTGTTCCATTACTTGTTCAATATTGTACACGTTCTCCCTATCCACTTGAGTTTCTAATACAGTTGCCCTTAGTGAATTGGAAGAATTGGGTATGTTGTATTTTTTTTTGGCGTAATGTATTTCTATCATAGATTTTTACGTAAATCACGTTTATTAAAGCATTATCATTGTCATTTGTGGTTGGTTAAGCTATTATACCACCAATAGTTACTATTTCTGTTTATTGTTTCAATGATGGTTCAATAGTTCGTCTTTTTTCCGAGATGTGGTTGCTGGTTATAATGTTTGATTTAGAGGTGGAGAACTATATAGGGCGAATACGATTAGCTTAGAGCCTTCAAGTGTTGGCGGTGATTTGGAATGAATTGTAAGTTTTGGTGTTCGATATGTTATACTTCATTTTGCATGCAATAGCATGGAAGTTGTAGTAGTCAAGTTTTAAATAGGATGTAGGATGTAGGATGGAGAGCTTAACGTTATGAATCAGTCAGTACTTTCAAGGTGAGTTTCAAGAAGGCTTTTACCTGTTGTGGGTTATTTACTCCAATTGGGCCCTAGATAATTTGTGTGTGTTGGTCTTCTCTTTGGTGTAAAGTATTCCAAACATCTATTTGTTTGGTCAAGGAGGAAACAGTAGTTCAATTGTTGTGTACACAGAGTTACATTAGTTGATTTTAACCATAGAAACAAGCTGACCTACCATGTTTCTTATGCTTTTAGGTTCATTTTTGTCTTAGAAGTCTTACAAACATTTTACTTTGTCATTTAACCGTGTTAATCATCTTGTGTAACAGGTTATGGGACTTGGCAAGGGAAATGAAGGAGAGACGAGTAGAAGTTCGAAAAGAAAGAAAGGCATCTTCCATCCAAATCAGGTTACGAAAAAGGATACTTATCTTCTGAATTAGGGCATGTTAATGTTTCTTTTAAGTATCTGGAGTTCATCCTCTTTTCAAGACACTCCATTGCCTATGAGGCGAGAAGTGTGATGTTAGGATAAATATACCTAAATTGAAATGTGGAGAAGCCGATAATTTTGAGTGCAATAATTTTCTAATATTTAAGTAGTTTTAGATGAAAATTTGAAAATAAGTTTTTTGATTTACAAGTCATATATATATATTAGCTACGGAAATTGAAAGCAAGTAGTGGAAAGTTAAGGATTTTACGGATTATACAAAGTTGACAATTTCAAGTGCTAAAGAAGTTCATTTTGAGAGTAAATACAATTCTATTCCGTCTGAATATAGTATAGATATAATTTGGTGTAGTGTGAACAATATTTTCAATGAGAAATTTTATGAAATGGTTGATGCAGAAAATTATTTCAAAAGATTATGTATATTTTTTTGCCAAAGCATTAGATTTGATATACTATTGAAATTCATGGTCAAAATATTGACCAAAGAAAAAGGAGGATATACTATTGAATTGGGTATGCATTTTCTGATCATCTTTTCTCTTGGTCAATAGTATATCTCCTTTTTTTTTTGGTCAATATTTTGACCAAGAACTTCAATAGTATATCAAATCTAATGCTCTCGCAAAAAAATACACATAATATTTTGAAATGATCTTCTGTATAACCATTTCATTAAATTTTCCATTGAAAATATTGCTCACACTATCCCAAATTATGTCTATACTATATGCAGACGTAATAGAATTGTATTTGTTCTCAAAATGAACTTCTTTAACACTTGGAAATGTCAACTTGTATGGTCCGTAAAATCCTTAACTTTTCATCACTTGCCTTCAACTCTAACATATATATATATATATTTGACTTGTAAATCAAAAAGCTTATTTTCAAATTTTCATCTAAAACTACTGTGAATATTAGAAAATCATTGCCCTCATAATCATCGGCTTCTCCACATTTCAATTTAGGCATATGCGTCATAACGTCCACTTCTCGCCAATACTTAAAAGAAACATTAACATGCCCTAAATTCATCATGTCGAAAACCCTCCAAAACAAAAGAAGCCCCAAATTATTTCAATTTCATAATTCTAGGGTTCTACGGTCGAGAAAGAAGGCGAATCATCTGAATTTGGTAATTTCTGTCACATTATTTCAATTTCATAATTCTAGGGTTCTATTGTTGAGAAAGAAGGCGAATCTCTGAAATTGGTAATTTCTGTCACATTATTTCAATATCATAATTCTAGGGTTTCCATCTTCCTCCTATTCATGAAATGAACAACCGCTTTTGAATTGCTAAATGTAATCCAATTCTCTCGGGAGTTTCGTTTATATACTACTTTTGGGGAGTTTTATTTGTTTCTGGGTTTTGTTCTTTTGGTTTTTGCTTCGTGATTGTGTTTAATTGAGGAGTTAATGAAGTCGGCCCCATTATGTGTTTTCTTTAATTGTCTTTGTGTTAATTTTTTATGTTTTTTTTTTCAATGGTTAGCTTTTGAATTACGTTTTGTCTGTAATTGCTTCATGATGCTGAAATTTGTGAGTCCCGAAGTGTTGAGATATCTTTGAAAAATTAGAATTGATTTTTTAGATTACTTGTAGTTTCTATCTGAAATAGATGATTTTTATTCATTCCTGCCTCCACAATTATTTCTTTTTTTATGTATATTATTTGCGTCACTCTTAATTTGTAGGTGGACCTTAATCCATTCCGTTTCACCATGGCTTTCAAAATTACAAATCAAATGTGGGATTCGGTTTATAACAAACTCATTGTTTCTGAAAACGGGAAAGAGATTGAGAGACTATTTGCTGAATATGGCAGAGTTTGTTTAGAAGTCACAATAGAGAAGAGTAATTTTATTGCTCAGTTTTACTTGTTGTTATATCCCCAATCCAGTTTCAAAATCCTAAGGTTTCCACCTTCACCCAACTTCCCTAATTTCACTGAGTTTTGCAAATTATTTTCACTCACTGTGTATTTAGGCATCATATACATTTATAGTCATATAAATAGATGTTCATTTCTATTTCTGCAATTATTTCATTTTCCGTATGATTGTTTCAGCTCTGTGTGTTAGGGTGTGTAGTAATGACGGACAGATTTTAAATAGATGTTCATTTCTATTTCTGCAATTATTTCATTTTCCGTATGATTGTTTCAGCTCTGTGTGTTAGGGTGTGTAGTAATGAAGGACGGATTTTAAAATTTACTGTCTTTTTGAAAAATAATTTCTTGAGAAGATAAAGACTTTCCAAATCACAAATCTTTTGTCGGACTACTTTTATTTTGTGTAATGAGACATCGTTTATGCGAAGTATATACAAATGGATAGTAGTATTAATAGAGTAGTTTCTTGCTGTTAATTCAATCCTAATTGATTTTTTTAAGTTGACAAGGTGAGGTTGACAGCCATCGTGTGCTTATTAGATCTGAACCAGTTATTGAGGTACTATCTATTACTTTGCATAACCAAAACCTAAACGATTCCGCTTCGGATGACAGCAGCAAAGAAGCGTTGGAGCTCTATGGTACTGTTTATCTCCATGATAGTATGGCCCGTACGGGTGAAGGCTGCAACCGTATTGTTTTTTTCCAATGAGAGGAGGAATTTGATGACCCAGAGATCATCCCTTTTGTTGGTGGTGCCTTAACAACATCATCATCACTTCGAACAATTTCACAAACTTACTGTTCCCGGTATTGCCTTTAATGCTGAGGTAGAGTATCTTGCTCTAACATTTGGTGTTCATGCCAATGTCAACGTCCAACTCTTTAAGCAACAAGAGCAAGAAGAAGATGAAGATGAAGACGGAGACAAAGATATTAATATTTATGGCACAATATCTGCTGCGTATAATCCTAACACTTATAAAAGCAAGAAGTTGATATTACTATTCCCATAATAGTGAGGTTACGAAATTGCCCCCAGTTTTCTTCCTTCTTTTTTTGTCTTTTACCTTACTGACAGTATATTTACGTAATTACTGTCTCTTATTAGAGGCTGCCGCGTGTCCCTTTCACCTACAACCAAGCTCTCCTCCCTCATCCTCCTTACCCTGCTGCTTTGGGGCCGTTTTTCCCTCTCTAGCTTCCCTGTCCTCCTACCCTGCCACTTACTCTCCCCTCTGCCAGGGCTTACTCAAAGTGAGAATGATGAGTTTCTTTTCATCTCCATCAGTGTTTAAGAATCGTATTTAGGATATATGCAGAGGTTCATCATTGTCGACCTCAACATTAAGACTACGCAAACATCTGTCATCTCTTCAATAATTTGGTTATCTCCGCCTCTACCTCTTCTCTCTACGCTCAATTGTAGATTAATCTAGGATTTTCTTCGTTTAAATGCCGACTCATTTGGTGTATCATTTGCTTAAAATTTGATTAATTTAGGGTTTTCACTTCTCCCAAATTCATTTAGTCTATGTATATATTGCTTGAAATTTGATTAGTTTGGGTTAATGTTATGTTTCATTGATCAATTTTGGTTGGGATTGTGTGTGTTGATGCAGAAGGCTGACATTATTTCGTCCCATGAGTCTACCGACCATGTCGTGTTTTTGTTCTTTCAGTTGCTAAACCGGATATTATTGTTATATTCGCTTAAAATTCGAATAATTTAGATTTTTCTCCTCTCCCAAATTCATATAGTTTATGTATATGTTGCTTTAAGGTTGATTCATTTGGGTTAATGTTATTGTTCATTGATCAATTTTAGTTGGGGTTGTGTATGTTGATATCGTGTTTTTGTTCTTTCAGTTGCTAAACCGAGTATTATTGCTATATATATTTGCTTAAAGTTCGATTAATTCAGGGTTTTATTCTCTCCCAAATCCCAATTCTTTGATACACTATTTGATGAAATTATTTTTGGAATTCGAATTGGTTTGATTTGTGAATTGTTGATTTTATTGTATGTGTCTTGATAATGAGCAGTTTAAGAGAAGATCGATGTACATCACTTTGATTTAA

mRNA sequence

ATGGAAGATGGGATCAGAAACTTCCGAGTTCTGAAGCTCCTCACTCTCACTTTGTCTTCTTTTTCCCTGTTGAATTTGCAAATTGATTCCGGACAACAACCTCACTTCTTCCCTGACCTTAAGATTTTGGTGCGTAATCTTCCATTTAATGTTGACAGTGCTGAGCGCGATGGGTTGTTCGGTGCTGCTGGTACCGTTGAAATGGTTGAGCACGCCGGCGGTACACAAGCAGAGAGTCAATACACCCATCTGAATTTGGTTATGGGACTTGGCAAGGGAAATGAAGGAGAGACGAGTAGAAGCATATGCGTCATAACGTCCACTTCTCGCCAATACTTAAAAGAAACATTAACATGCCCTAAATTCATCATGTCGAAAACCCTCCAAAACAAAAGAAGCCCCAAATTATTTCAATTTCATAATTCTAGGGTTCTACGGTCGAGAAAGAAGGCGAATCATCTGAATTTGTTTAAGAGAAGATCGATGTACATCACTTTGATTTAA

Coding sequence (CDS)

ATGGAAGATGGGATCAGAAACTTCCGAGTTCTGAAGCTCCTCACTCTCACTTTGTCTTCTTTTTCCCTGTTGAATTTGCAAATTGATTCCGGACAACAACCTCACTTCTTCCCTGACCTTAAGATTTTGGTGCGTAATCTTCCATTTAATGTTGACAGTGCTGAGCGCGATGGGTTGTTCGGTGCTGCTGGTACCGTTGAAATGGTTGAGCACGCCGGCGGTACACAAGCAGAGAGTCAATACACCCATCTGAATTTGGTTATGGGACTTGGCAAGGGAAATGAAGGAGAGACGAGTAGAAGCATATGCGTCATAACGTCCACTTCTCGCCAATACTTAAAAGAAACATTAACATGCCCTAAATTCATCATGTCGAAAACCCTCCAAAACAAAAGAAGCCCCAAATTATTTCAATTTCATAATTCTAGGGTTCTACGGTCGAGAAAGAAGGCGAATCATCTGAATTTGTTTAAGAGAAGATCGATGTACATCACTTTGATTTAA

Protein sequence

MEDGIRNFRVLKLLTLTLSSFSLLNLQIDSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVEHAGGTQAESQYTHLNLVMGLGKGNEGETSRSICVITSTSRQYLKETLTCPKFIMSKTLQNKRSPKLFQFHNSRVLRSRKKANHLNLFKRRSMYITLI
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo22550Spo22550gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo22550.1Spo22550.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22550.1.CDS.6Spo22550.1.CDS.6CDS
Spo22550.1.CDS.5Spo22550.1.CDS.5CDS
Spo22550.1.CDS.4Spo22550.1.CDS.4CDS
Spo22550.1.CDS.3Spo22550.1.CDS.3CDS
Spo22550.1.CDS.2Spo22550.1.CDS.2CDS
Spo22550.1.CDS.1Spo22550.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo22550.1.exon.6Spo22550.1.exon.6exon
Spo22550.1.exon.5Spo22550.1.exon.5exon
Spo22550.1.exon.4Spo22550.1.exon.4exon
Spo22550.1.exon.3Spo22550.1.exon.3exon
Spo22550.1.exon.2Spo22550.1.exon.2exon
Spo22550.1.exon.1Spo22550.1.exon.1exon


Homology
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BLAST of Spo22550.1 vs. NCBI nr
Match: gi|902181167|gb|KNA09687.1| (hypothetical protein SOVF_151300 [Spinacia oleracea])

HSP 1 Score: 72.8 bits (177), Expect = 6.400e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29  DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 80  DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 121
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|1015370|gb|AAA79045.1| (24 kDa RNA binding protein, partial [Spinacia oleracea])

HSP 1 Score: 72.8 bits (177), Expect = 6.400e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 27 DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 68
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|731345735|ref|XP_010684074.1| (PREDICTED: ribonucleoprotein At2g37220, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 64.3 bits (155), Expect = 2.300e-7
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 1 

		  

Query: 32  QQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           QQP+F PDLK+ V NLPFNVDS++  GLFG+AGTVEMVE
Sbjct: 82  QQPNFSPDLKLFVGNLPFNVDSSDLAGLFGSAGTVEMVE 120
[Close]
BLAST of Spo22550.1 vs. NCBI nr
Match: gi|527188721|gb|EPS60671.1| (hypothetical protein M569_14131, partial [Genlisea aurea])

HSP 1 Score: 60.1 bits (144), Expect = 4.300e-6
Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D G +P F PDLK+ V NLPFNVDSA   GLF  AG VEMVE
Sbjct: 24 DQGDEPRFSPDLKLYVGNLPFNVDSATLAGLFEQAGNVEMVE 65
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQY7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_151300 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.500e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29  DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 80  DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 121
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: Q41367_SPIOL (24 kDa RNA binding protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.500e-10
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D+G+QP+F PDLKI V NLPFNVDSAE  GLFGAAGTVEMVE
Sbjct: 27 DAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVE 68
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g161820 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.600e-7
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 1 

		  

Query: 32  QQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           QQP+F PDLK+ V NLPFNVDS++  GLFG+AGTVEMVE
Sbjct: 82  QQPNFSPDLKLFVGNLPFNVDSSDLAGLFGSAGTVEMVE 120
[Close]
BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Match: S8C8F4_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_14131 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.000e-6
Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 1 

		  

Query: 29 DSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
          D G +P F PDLK+ V NLPFNVDSA   GLF  AG VEMVE
Sbjct: 24 DQGDEPRFSPDLKLYVGNLPFNVDSATLAGLFEQAGNVEMVE 65
[Close]
BLAST of Spo22550.1 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.300e-7
Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 1 

		  

Query: 16  LTLSSFSLLNLQIDSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           + LS F  L   ++  +QP F  DLK+ V NLPF+VDSA   GLF  AG VEMVE
Sbjct: 63  VALSGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVE 117
[Close]
BLAST of Spo22550.1 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.900e-7
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 1 

		  

Query: 16  LTLSSFSLLNLQIDSGQQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           + LS F  L   ++  +QP F  DLK+ V NLPF+VDSA   GLF  AG VE+VE
Sbjct: 64  VALSDFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVE 118
[Close]
BLAST of Spo22550.1 vs. TAIR (Arabidopsis)
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.800e-6
Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 1 

		  

Query: 32  QQPHFFPDLKILVRNLPFNVDSAERDGLFGAAGTVEMVE 71
           ++  F  DLK+ V NLPFNVDSA+   LF +AG VEMVE
Sbjct: 83  KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVE 121
The following BLAST results are available for this feature:
BLAST of Spo22550.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 4
Match NameE-valueIdentityDescription
gi|902181167|gb|KNA09687.1|6.4e-1080.9hypothetical protein SOVF_1513... [more]
gi|1015370|gb|AAA79045.1|6.4e-1080.924 kDa RNA binding protein, pa... [more]
gi|731345735|ref|XP_010684074.1|2.3e-774.3PREDICTED: ribonucleoprotein A... [more]
gi|527188721|gb|EPS60671.1|4.3e-666.6hypothetical protein M569_1413... [more]
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BLAST of Spo22550.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 4
Match NameE-valueIdentityDescription
A0A0K9QQY7_SPIOL4.5e-1080.9Uncharacterized protein OS=Spi... [more]
Q41367_SPIOL4.5e-1080.924 kDa RNA binding protein (Fr... [more]
A0A0J8BYC6_BETVU1.6e-774.3Uncharacterized protein OS=Bet... [more]
S8C8F4_9LAMI3.0e-666.6Uncharacterized protein (Fragm... [more]
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BLAST of Spo22550.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ROC2_NICSY1.3e-752.729 kDa ribonucleoprotein B, ch... [more]
ROC2_NICPL3.9e-750.931 kDa ribonucleoprotein, chlo... [more]
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BLAST of Spo22550.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G37220.17.8e-658.9RNA-binding (RRM/RBD/RNP motif... [more]
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GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding