Spo22568.1 (mRNA) | SpinachBase

Overview


Name	Spo22568.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	FAR1-related sequence 5
Location	chr1 : 19243480 .. 19245049 (-)
Sequence length	672

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCGCAGTTATGGAAGATTCTGAAGCTCTTTTCGAATCTAATTCTGGAATTTTAAGTACATTGATGTTAGAATGTAAGTTTATATTTTTATTATTTTCATTTATTTGTTTTTGATTTCAATGTTTTTGGTTTTGATTCTTTTCAATTTTATATTTTGATTTTGGATAAAATGTGTTTAGATTTTTGTTATTTTTCGTGTTTTCGCAGGATATTTCGATTTTGATTTGTATCTTTGTCTTTGTTTTCTGCAGAATTTCTTATTTTTTTTGCAATTGTACGTTAGTTTTTGTTCGATTTTTATTCATAATTTTATTTATTATCAATGTATATAATGTTAATGAATTTTTAGCTCAGATCTTATGAACATTATATATTTTGATAAAATACATATTATGTTATGAAGTTTTGAATTGTTTTGTCCCCAAAAAAAAAATTATTCATTGTTTAGTTATCACATTCTTAACAAATATATTCATGAATATTCAGTTCAAGGAAATTGAACATTGTCTACAATAATAATGAACATTTTATTTAATGACTTTGAATGTTATGTATTTTAGTAATGAACAATGCATTTAAATATATTGTATCTTATTTATTTAGATAATGAACATTCTATTGTATTATATTGAACTTTCTATTAAGAGTTAATCATTACCTATGTTACAATGAACATTTTATTCAAGTATTTTATCATTATTTATTTTTTACAATGAACATTTTATTTAATGATTTTGAATATTACCTATGTTCGTAATGAACATTCTATTTAAGTACATTGAAAAATACCTATTTAAACAATGGACATTCTATTTTAATATTTTTAACATTACTATTTTAATATTGAACATTTTATTTAAGGATATTGAACATTTCAAATGTCAAAATGCTAGTTATTATTGAAATTGATCATTCACTATCTTAACATTGAACAATCACTATTTTAACATTGAACATTCTTCCATTCGCAGTGAATAAGGAAGTAAGTCTTTTTGTTGAAGGGTCAGAATCTATGTTAATGATGAAGGAAGCTAAAAATGAAGATGAAGCTTATGATTTGTATAATGAATATGCTTTTAGTAAAGGTTTTGGTATTAGGGTTGGGAAAGGTCGGAAGCGTCAAAATAGTGAACTTTATACTATGAAACGGTTCTTGTGTAGCTGCGAAGGGGTTAAAGATGAAAAAAGGAAGAGAACAAGGTCTTATGCTAGATTGGATACGCGTACTGGGTGTACTGCTTTTGTTCAGTTTTCTATTGGTAAAGATGGTGTGTGGACGGTTGTGAATCATAATATGATTCATAACCATGCTATGGTTCCTCTAAATAAGAGGCATTTGATAAGATCACAAAGGAAGGTTAGTAAGGAGGCTCTTTACTTTATATCTACTTTAAAAGCTAGTGGTGTTAAAGTGTCTGATACCTTGAGGGTTTTGAGGAAAGAAGTAGGCGGATCACCTATGGTCGATTTTACAGCTAGTGATGCTTATAATGCTTTATCACGTGCAAAAGCTAATAAACTTGAAGGTCATGACTGTCATCAGTTAATCAAGTATTTTACCTAG

mRNA sequence

ATGGAGCTCGCAGTTATGGAAGATTCTGAAGCTCTTTTCGAATCTAATTCTGGAATTTTAAGTACATTGATGTTAGAATTGAATAAGGAAGTAAGTCTTTTTGTTGAAGGGTCAGAATCTATGTTAATGATGAAGGAAGCTAAAAATGAAGATGAAGCTTATGATTTGTATAATGAATATGCTTTTAGTAAAGGTTTTGGTATTAGGGTTGGGAAAGGTCGGAAGCGTCAAAATAGTGAACTTTATACTATGAAACGGTTCTTGTGTAGCTGCGAAGGGGTTAAAGATGAAAAAAGGAAGAGAACAAGGTCTTATGCTAGATTGGATACGCGTACTGGGTGTACTGCTTTTGTTCAGTTTTCTATTGGTAAAGATGGTGTGTGGACGGTTGTGAATCATAATATGATTCATAACCATGCTATGGTTCCTCTAAATAAGAGGCATTTGATAAGATCACAAAGGAAGGTTAGTAAGGAGGCTCTTTACTTTATATCTACTTTAAAAGCTAGTGGTGTTAAAGTGTCTGATACCTTGAGGGTTTTGAGGAAAGAAGTAGGCGGATCACCTATGGTCGATTTTACAGCTAGTGATGCTTATAATGCTTTATCACGTGCAAAAGCTAATAAACTTGAAGGTCATGACTGTCATCAGTTAATCAAGTATTTTACCTAG

Coding sequence (CDS)

ATGGAGCTCGCAGTTATGGAAGATTCTGAAGCTCTTTTCGAATCTAATTCTGGAATTTTAAGTACATTGATGTTAGAATTGAATAAGGAAGTAAGTCTTTTTGTTGAAGGGTCAGAATCTATGTTAATGATGAAGGAAGCTAAAAATGAAGATGAAGCTTATGATTTGTATAATGAATATGCTTTTAGTAAAGGTTTTGGTATTAGGGTTGGGAAAGGTCGGAAGCGTCAAAATAGTGAACTTTATACTATGAAACGGTTCTTGTGTAGCTGCGAAGGGGTTAAAGATGAAAAAAGGAAGAGAACAAGGTCTTATGCTAGATTGGATACGCGTACTGGGTGTACTGCTTTTGTTCAGTTTTCTATTGGTAAAGATGGTGTGTGGACGGTTGTGAATCATAATATGATTCATAACCATGCTATGGTTCCTCTAAATAAGAGGCATTTGATAAGATCACAAAGGAAGGTTAGTAAGGAGGCTCTTTACTTTATATCTACTTTAAAAGCTAGTGGTGTTAAAGTGTCTGATACCTTGAGGGTTTTGAGGAAAGAAGTAGGCGGATCACCTATGGTCGATTTTACAGCTAGTGATGCTTATAATGCTTTATCACGTGCAAAAGCTAATAAACTTGAAGGTCATGACTGTCATCAGTTAATCAAGTATTTTACCTAG

Protein sequence

MELAVMEDSEALFESNSGILSTLMLELNKEVSLFVEGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEGHDCHQLIKYFT

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo22568	Spo22568	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo22568.1	Spo22568.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22568.1.CDS.2	Spo22568.1.CDS.2	CDS
Spo22568.1.CDS.1	Spo22568.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22568.1.exon.2	Spo22568.1.exon.2	exon
Spo22568.1.exon.1	Spo22568.1.exon.1	exon

Homology

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BLAST of Spo22568.1 vs. NCBI nr
Match: gi|731363397|ref|XP_010693411.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 194.5 bits (493), Expect = 2.000e-46
Identity = 100/208 (48.08%), Postives = 140/208 (67.31%), Query Frame = 1


		  
Query: 15  SNSGILSTLMLELNKEVSLFVEGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGR 74
           +NS + ++  +     V  F EGSES L+ K+ K+++E+++LYNEYAF  GF +R GK R
Sbjct: 38  ANSIVSNSKSIRKKTYVVEFEEGSESELLQKQVKDDEESFELYNEYAFEFGFSVRKGKTR 97

Query: 75  KRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKDGVWTVVNHN 134
            R   +   +++ +C   G K+      +SY+++D RTGC A+VQF + +DGV+T V H 
Sbjct: 98  CRVKDDSICIRQMVCWRTGFKNVNNVGHKSYSKVDYRTGCRAYVQFHVDEDGVYTCVAHV 157

Query: 135 MIHNHAMVPLNKRHLIRSQRKVSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFT 194
           M HNHAMVPL++RH IRS R V  E L FIS LK SG+ V+D +RV+RKEVGGSP + F 
Sbjct: 158 MGHNHAMVPLHERHYIRSHRLVRSEQLAFISNLKRSGIPVADAIRVMRKEVGGSPNLGFM 217

Query: 195 ASDAYNALSRAKANKLEGHDCHQLIKYF 223
           ASDAYNAL+  K   ++  D +QLIK+F
Sbjct: 218 ASDAYNALAGEKVKSIDFSDSNQLIKFF 245

[Close]

BLAST of Spo22568.1 vs. NCBI nr
Match: gi|731326388|ref|XP_010673996.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 184.1 bits (466), Expect = 2.700e-43
Identity = 98/199 (49.25%), Postives = 134/199 (67.34%), Query Frame = 1


		  
Query: 26  ELNKEVSLFVEGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMK 85
           EL K+ + +VE   S L+ KE  N++EAY LYNEYAF  GFGIR GK   R  ++    +
Sbjct: 31  ELEKK-NEYVECETSELIHKEVANDEEAYKLYNEYAFKCGFGIRKGKVCWRYETKTIRQR 90

Query: 86  RFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKD-GVWTVVNHNMIHNHAMVPL 145
             +CS EG+KD K    +++ +LD R GC AF+QF + KD G + V  H+MIHNH MVPL
Sbjct: 91  FLVCSREGLKDTKGGVPKAFTKLDQRCGCKAFIQFDVSKDFGFFIVTKHHMIHNHPMVPL 150

Query: 146 NKRHLIRSQRKVSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSR 205
            +RHLIRS RKV+ E L+ I+ L++ GV V++ +RVLRKE GGSP + F   DAY+A++ 
Sbjct: 151 KQRHLIRSHRKVTVEQLHMINNLRSCGVGVAEAVRVLRKEAGGSPNLGFVNRDAYDAVAT 210

Query: 206 AKANKLEGHDCHQLIKYFT 224
            +  +L+G D +QLIK FT
Sbjct: 211 QRKKELDGCDSNQLIKNFT 228

[Close]

BLAST of Spo22568.1 vs. NCBI nr
Match: gi|731374778|ref|XP_010667064.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 174.1 bits (440), Expect = 2.700e-40
Identity = 93/199 (46.73%), Postives = 133/199 (66.83%), Query Frame = 1


		  
Query: 26  ELNKEVSLFVEGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMK 85
           EL KE + +V+   S L+ KE  N++EAY LYN+YAF  GFGIR GK   R +++    +
Sbjct: 34  ELAKE-NEYVKCETSELIHKEVVNDEEAYKLYNDYAFKCGFGIRKGKVCWRYDTKTIRQR 93

Query: 86  RFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKD-GVWTVVNHNMIHNHAMVPL 145
             +CS  G+KD K    ++Y +LD R GC A++QF + K+ G++ V  H+MIHNH MVPL
Sbjct: 94  FLVCSRAGLKDTKSGVPKAYTKLDQRCGCKAYIQFDVSKESGLFIVTKHHMIHNHPMVPL 153

Query: 146 NKRHLIRSQRKVSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSR 205
            +RHLIRS RKV+ E L+ I+ L++ GV V++ +RVLRKE GGS  + F   D Y+A++ 
Sbjct: 154 IQRHLIRSHRKVTVEQLHMINNLRSCGVGVAEAVRVLRKEAGGSANLGFAHRDTYDAVAA 213

Query: 206 AKANKLEGHDCHQLIKYFT 224
            +  +L+G D +QLIK FT
Sbjct: 214 QRKKELDGCDSNQLIKNFT 231

[Close]

BLAST of Spo22568.1 vs. NCBI nr
Match: gi|731329385|ref|XP_010675567.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 171.0 bits (432), Expect = 2.300e-39
Identity = 95/199 (47.74%), Postives = 130/199 (65.33%), Query Frame = 1


		  
Query: 26  ELNKEVSLFVEGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMK 85
           EL K+ + +VE   S L+ KE  N++EAY LYNEYAF  GFGIR GK   R +++    +
Sbjct: 31  ELEKK-NEYVECETSELIHKEVANDEEAYKLYNEYAFKCGFGIRKGKVCCRYDTKTIRQR 90

Query: 86  RFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKD-GVWTVVNHNMIHNHAMVPL 145
             +CS EG+KD K        +LD R GC AF+QF I K+ G++ V  H+MIHNH MVPL
Sbjct: 91  FLVCSREGLKDTKG----GVPKLDQRCGCKAFIQFDISKESGLFIVTKHHMIHNHPMVPL 150

Query: 146 NKRHLIRSQRKVSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSR 205
            +RHLIRS RKV+ E L+ I+ L++ GV V++ +RVL KE GGS  + F   DAY+ ++ 
Sbjct: 151 KQRHLIRSHRKVTVEQLHMINNLRSCGVGVAEAVRVLTKEAGGSANLGFVNRDAYDVVAT 210

Query: 206 AKANKLEGHDCHQLIKYFT 224
            +  +L+G D +QLIK FT
Sbjct: 211 QRKKELDGCDSNQLIKNFT 224

[Close]

BLAST of Spo22568.1 vs. NCBI nr
Match: gi|731340924|ref|XP_010681654.1| (PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 145.6 bits (366), Expect = 1.000e-31
Identity = 77/187 (41.18%), Postives = 107/187 (57.22%), Query Frame = 1


		  
Query: 36  EGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVK 95
           E  ES L+ K    E +AY+LYNEYAF  GFG+RV K RKRQN  +   + F C+ EG  
Sbjct: 58  ESQESELLGKIVNTEKKAYELYNEYAFRIGFGVRVSKLRKRQNGVIKG-REFCCNKEG-- 117

Query: 96  DEKRKRTRSYARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRK 155
            ++ K  + Y +LD RTGC A V F I K+  + VV H M HNH   P    H +RSQR 
Sbjct: 118 KKQEKSDKQYTKLDRRTGCKAMVYFEIDKNNQYVVVRHKMEHNHTFCPRGLVHHVRSQRS 177

Query: 156 VSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEGHDC 215
           +++  + +++ L++ GV V++  R L+ E G SP + F   DAY A+        +G D 
Sbjct: 178 ITQAEVNYLAHLRSKGVGVANGYRCLKAEAGSSPALGFNLQDAYQAVLNENKKNFDGSDA 237

Query: 216 HQLIKYF 223
           + LI YF
Sbjct: 238 NTLINYF 241

[Close]

BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
Match: A0A072UB45_MEDTR (FAR1 DNA-binding domain protein OS=Medicago truncatula GN=MTR_6g051425 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.000e-25
Identity = 67/192 (34.90%), Postives = 108/192 (56.25%), Query Frame = 1


		  
Query: 35  VEGSESMLMMKEAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYT-MKRFLCSCEG 94
           ++    + + +  +++DEAY+LY E+ F  GF +R GK     N +  T +K + CS +G
Sbjct: 11  IDKPRDIFLGQVVQSKDEAYNLYQEHGFKMGFSVRKGKELYYDNDKKNTRLKDYYCSKQG 70

Query: 95  VKDEKRKRTR----SYARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHL 154
            K+ + +       +Y R D+RT C A V+F++ KDG W +    M HNHA+VPL +RHL
Sbjct: 71  FKNNEPEGEIVGEVAYQRADSRTNCKAMVRFNVSKDGEWRITKLIMDHNHALVPLEQRHL 130

Query: 155 IRSQRKVSKEALYFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANK 214
           +RS RKVS+     I ++  +G+KV+     L +EVGG   +  T  D +N +   K+  
Sbjct: 131 LRSMRKVSETKGGLIKSMVNAGMKVTHVWSYLGEEVGGFDKLGMTMKDVHNFVYTEKSKL 190

Query: 215 LEGHDCHQLIKY 222
           ++G D   LI +
Sbjct: 191 IKGGDAQSLINH 202

[Close]

BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
Match: C5XWU5_SORBI (Putative uncharacterized protein Sb04g005390 OS=Sorghum bicolor GN=Sb04g005390 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.600e-23
Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 1


		  
Query: 48  KNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYAR 107
           ++EDEAY++YN YA   GF +R  K ++R++  L + K  +CS +G ++ +     S  +
Sbjct: 100 QSEDEAYNMYNTYAGKVGFSVRKSKTKRRKDDSL-SQKYMVCSSQGQRENE-----SSQK 159

Query: 108 LDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFISTL 167
            +TRTGC A VQFSI K+G+WTV      HNH +   NK+H +RSQRKV +     I  +
Sbjct: 160 DNTRTGCNARVQFSISKEGIWTVQKVVEEHNHYLASPNKKHKLRSQRKVIEADRKLIGQI 219

Query: 168 KASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEGHDCHQLIKY 222
           + +G+K +     +++  GG   + F  +D  N + R +   LE +D   L +Y
Sbjct: 220 REAGMKPAQIYEFMKEFYGGEENIPFAKTDCNNEIGRERRQYLEANDAQTLSQY 267

[Close]

BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
Match: A0A059D2Y3_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_B01589 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.700e-23
Identity = 63/176 (35.80%), Postives = 99/176 (56.25%), Query Frame = 1


		  
Query: 49  NEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMK-RFLCSCEGVKDE-KRKRTRSYA 108
           NE+EAY+ YN YA  KGFG+R  KG+K  NS+    +  F+C+CEG          R+  
Sbjct: 5   NENEAYNTYNAYAICKGFGVR--KGQKANNSKGVLRRCTFVCNCEGHSPSIPPHEQRNIY 64

Query: 109 RLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFIST 168
           R   RTGC A ++F+I ++GVW V     +HNH  +   ++HLIRS R ++  +   +++
Sbjct: 65  RTVKRTGCEACIKFTI-ENGVWEVTKFEDVHNHPFIEDKQKHLIRSYRHITDTSKGILTS 124

Query: 169 LKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEGHDCHQLIKYF 223
           +  +G++ + T   L  E GG+  + FT  D  N L   + N ++  DC +LI +F
Sbjct: 125 MTGAGIRATKTYSYLCDEAGGANNIGFTLRDCQNFLQSKRRNLIDAGDCQRLINHF 177

[Close]

BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
Match: A0A059CQZ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C01967 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.200e-23
Identity = 67/176 (38.07%), Postives = 94/176 (53.41%), Query Frame = 1


		  
Query: 49  NEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSE-LYTMKRFLCSCEGVKDE-KRKRTRSYA 108
           NEDEAY+ YN YA  KGFG+R  KG+K  NS+ +     FLC+CEG          R   
Sbjct: 5   NEDEAYNTYNAYAICKGFGVR--KGQKANNSKGILRACTFLCNCEGYSPPILPHEQRDIY 64

Query: 109 RLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFIST 168
           R   R+GC A ++F I ++GVW VV    +HNH  V   ++HLIRS R ++      +++
Sbjct: 65  RTVKRSGCKACIKFKI-EEGVWVVVKFEDVHNHPFVDDKQKHLIRSYRHITNTNGSILTS 124

Query: 169 LKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEGHDCHQLIKYF 223
           L  +GV+ +     L  E GG  +V FT  D +N L   +   +   DC  LI +F
Sbjct: 125 LVGAGVRATKAYSYLSGEAGGQEIVGFTLRDCHNFLQSKRRAFITAGDCQSLINHF 177

[Close]

BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
Match: A0A059C3I9_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_E01219 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.800e-22
Identity = 60/174 (34.48%), Postives = 93/174 (53.45%), Query Frame = 1


		  
Query: 49  NEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARL 108
           +E EAY  Y  YA  KGFG+R  K RK    E+ T + F+C+CEG       + R Y +L
Sbjct: 5   SELEAYHKYVAYAIGKGFGVRKSKIRKNDKGEI-TRRTFVCNCEGYAINSSDQERKYEKL 64

Query: 109 DTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFISTLK 168
           + R GC AF++F + ++G + V+++   HNH  +P ++RHLIR  R +S      +  + 
Sbjct: 65  EVRCGCPAFIRFKV-ENGSYEVIDYVPKHNHEFIPEHQRHLIRCGRMISDTCKGVLVDMA 124

Query: 169 ASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEGHDCHQLIKYF 223
            +G+  +   + L  E GGS  + F   D  N L   + N +E  DC  L+ +F
Sbjct: 125 KAGIGGTTAYKFLANEAGGSQNLGFILRDCQNFLQGERLNYIERGDCQSLLNHF 176

[Close]

BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.000e-18
Identity = 56/171 (32.75%), Postives = 83/171 (48.54%), Query Frame = 1


		  
Query: 46  EAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSY 105
           E ++E+ A   YN YA   GF  RV   R+ +       ++F+C+ EG ++   KRT+  
Sbjct: 78  EFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDR 137

Query: 106 A----RLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEAL 165
                R  TR GC A +   +   G W V      HNH +VP ++ H +RS R++S  A 
Sbjct: 138 EIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAK 197

Query: 166 YFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEG 213
             I TL+A+G+     +  L KE GG   V FT  D  N +   +   +EG
Sbjct: 198 TLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSIEG 248

[Close]

BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.300e-7
Identity = 45/174 (25.86%), Postives = 70/174 (40.23%), Query Frame = 1


		  
Query: 51  DEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARLDT 110
           + AY  Y EYA S GF   +   R+ + ++ +   +F CS  GV  E      S  R   
Sbjct: 61  EAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTV 120

Query: 111 -RTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFISTLKA 170
            +T C A +      DG W +      HNH ++P    H  R QR V       I  L A
Sbjct: 121 KKTDCKASMHVKRRPDGKWIIHEFVKDHNHELLPALAYH-FRIQRNVKLAEKNNIDILHA 180

Query: 171 SGVKVSDTLRVLRKEVGGSPMV-DFTASDAYNALSRAKANKLEGHDCHQLIKYF 223
              +       + ++ GG   +     +D  + + + +   LE  D   L++YF
Sbjct: 181 VSERTKKMYVEMSRQSGGYKNIGSLLQTDVSSQVDKGRYLALEEGDSQVLLEYF 233

[Close]

BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
Match: FRS12_ARATH (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.200e-6
Identity = 30/96 (31.25%), Postives = 46/96 (47.92%), Query Frame = 1


		  
Query: 46  EAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSY 105
           E    +EA + YN YA   GF +R G+  + +     + +RF+CS EG +          
Sbjct: 48  EFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQ---------- 107

Query: 106 ARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAM 142
             L++RTGCTAF++      G W +      HNH +
Sbjct: 108 --LNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

[Close]

BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
Match: FRS7_ARATH (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.600e-6
Identity = 30/94 (31.91%), Postives = 44/94 (46.81%), Query Frame = 1


		  
Query: 46  EAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSY 105
           E    +EA D YN YA   GF +R G+  + +     + +RF+CS EG +          
Sbjct: 33  EFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQ---------- 92

Query: 106 ARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNH 140
             L++RTGC AF++      G W +      HNH
Sbjct: 93  --LNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNH 114

[Close]

BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.800e-6
Identity = 42/143 (29.37%), Postives = 62/143 (43.36%), Query Frame = 1


		  
Query: 24  MLELNKEVSLFVEGSES-----MLMMKEAKN------EDEAYDLYNEYAFSKGFGIRVGK 83
           +L  +  V +F E S S        + E +N      ++ AY  Y EYA S GFGI +  
Sbjct: 10  LLTKSSNVDVFCEASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKA 69

Query: 84  GRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKDGVWTVVN 143
            R+ + S  +   +  CS  G K E  K T    R   +TGC A +     +D  W + N
Sbjct: 70  SRRSKRSGKFIDVKIACSRFGTKRE--KATAINPRSCPKTGCKAGLHMKRKEDEKWVIYN 129

Query: 144 HNMIHNHAMVPLNKRHLIRSQRK 156
               HNH + P +    +R + K
Sbjct: 130 FVKEHNHEICPDDFYVSVRGKNK 150

[Close]

BLAST of Spo22568.1 vs. TAIR (Arabidopsis)
Match: AT4G38180.1 (FAR1-related sequence 5)

HSP 1 Score: 95.1 bits (235), Expect = 5.700e-20
Identity = 56/171 (32.75%), Postives = 83/171 (48.54%), Query Frame = 1


		  
Query: 46  EAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSY 105
           E ++E+ A   YN YA   GF  RV   R+ +       ++F+C+ EG ++   KRT+  
Sbjct: 78  EFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDR 137

Query: 106 A----RLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEAL 165
                R  TR GC A +   +   G W V      HNH +VP ++ H +RS R++S  A 
Sbjct: 138 EIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSHRQISGPAK 197

Query: 166 YFISTLKASGVKVSDTLRVLRKEVGGSPMVDFTASDAYNALSRAKANKLEG 213
             I TL+A+G+     +  L KE GG   V FT  D  N +   +   +EG
Sbjct: 198 TLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSIEG 248

[Close]

BLAST of Spo22568.1 vs. TAIR (Arabidopsis)
Match: AT4G15090.1 (FRS (FAR1 Related Sequences) transcription factor family)

HSP 1 Score: 57.4 bits (137), Expect = 1.300e-8
Identity = 45/174 (25.86%), Postives = 70/174 (40.23%), Query Frame = 1


		  
Query: 51  DEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARLDT 110
           + AY  Y EYA S GF   +   R+ + ++ +   +F CS  GV  E      S  R   
Sbjct: 61  EAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTV 120

Query: 111 -RTGCTAFVQFSIGKDGVWTVVNHNMIHNHAMVPLNKRHLIRSQRKVSKEALYFISTLKA 170
            +T C A +      DG W +      HNH ++P    H  R QR V       I  L A
Sbjct: 121 KKTDCKASMHVKRRPDGKWIIHEFVKDHNHELLPALAYH-FRIQRNVKLAEKNNIDILHA 180

Query: 171 SGVKVSDTLRVLRKEVGGSPMV-DFTASDAYNALSRAKANKLEGHDCHQLIKYF 223
              +       + ++ GG   +     +D  + + + +   LE  D   L++YF
Sbjct: 181 VSERTKKMYVEMSRQSGGYKNIGSLLQTDVSSQVDKGRYLALEEGDSQVLLEYF 233

[Close]

BLAST of Spo22568.1 vs. TAIR (Arabidopsis)
Match: AT5G18960.1 (FAR1-related sequence 12)

HSP 1 Score: 55.1 bits (131), Expect = 6.600e-8
Identity = 30/96 (31.25%), Postives = 46/96 (47.92%), Query Frame = 1


		  
Query: 46  EAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSY 105
           E    +EA + YN YA   GF +R G+  + +     + +RF+CS EG +          
Sbjct: 48  EFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQ---------- 107

Query: 106 ARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNHAM 142
             L++RTGCTAF++      G W +      HNH +
Sbjct: 108 --LNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131

[Close]

BLAST of Spo22568.1 vs. TAIR (Arabidopsis)
Match: AT3G06250.1 (FAR1-related sequence 7)

HSP 1 Score: 53.9 bits (128), Expect = 1.500e-7
Identity = 30/94 (31.91%), Postives = 44/94 (46.81%), Query Frame = 1


		  
Query: 46  EAKNEDEAYDLYNEYAFSKGFGIRVGKGRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSY 105
           E    +EA D YN YA   GF +R G+  + +     + +RF+CS EG +          
Sbjct: 33  EFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQ---------- 92

Query: 106 ARLDTRTGCTAFVQFSIGKDGVWTVVNHNMIHNH 140
             L++RTGC AF++      G W +      HNH
Sbjct: 93  --LNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNH 114

[Close]

BLAST of Spo22568.1 vs. TAIR (Arabidopsis)
Match: AT2G32250.1 (FAR1-related sequence 2)

HSP 1 Score: 52.8 bits (125), Expect = 3.300e-7
Identity = 42/143 (29.37%), Postives = 62/143 (43.36%), Query Frame = 1


		  
Query: 24  MLELNKEVSLFVEGSES-----MLMMKEAKN------EDEAYDLYNEYAFSKGFGIRVGK 83
           +L  +  V +F E S S        + E +N      ++ AY  Y EYA S GFGI +  
Sbjct: 10  LLTKSSNVDVFCEASTSGNVAQCATVSELRNGMDFESKEAAYYFYREYARSVGFGITIKA 69

Query: 84  GRKRQNSELYTMKRFLCSCEGVKDEKRKRTRSYARLDTRTGCTAFVQFSIGKDGVWTVVN 143
            R+ + S  +   +  CS  G K E  K T    R   +TGC A +     +D  W + N
Sbjct: 70  SRRSKRSGKFIDVKIACSRFGTKRE--KATAINPRSCPKTGCKAGLHMKRKEDEKWVIYN 129

Query: 144 HNMIHNHAMVPLNKRHLIRSQRK 156
               HNH + P +    +R + K
Sbjct: 130 FVKEHNHEICPDDFYVSVRGKNK 150

The following BLAST results are available for this feature:

BLAST of Spo22568.1 vs. NCBI nr
BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
BLAST of Spo22568.1 vs. TAIR (Arabidopsis)

BLAST of Spo22568.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731363397\|ref\|XP_010693411.1\|	2.0e-46	48.0	PREDICTED: protein FAR1-RELATE...	[more]
gi\|731326388\|ref\|XP_010673996.1\|	2.7e-43	49.2	PREDICTED: protein FAR1-RELATE...	[more]
gi\|731374778\|ref\|XP_010667064.1\|	2.7e-40	46.7	PREDICTED: protein FAR1-RELATE...	[more]
gi\|731329385\|ref\|XP_010675567.1\|	2.3e-39	47.7	PREDICTED: protein FAR1-RELATE...	[more]
gi\|731340924\|ref\|XP_010681654.1\|	1.0e-31	41.1	PREDICTED: protein FAR1-RELATE...	[more]

BLAST of Spo22568.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A072UB45_MEDTR	3.0e-25	34.9	FAR1 DNA-binding domain protei...	[more]
C5XWU5_SORBI	1.6e-23	35.6	Putative uncharacterized prote...	[more]
A0A059D2Y3_EUCGR	4.7e-23	35.8	Uncharacterized protein (Fragm...	[more]
A0A059CQZ3_EUCGR	6.2e-23	38.0	Uncharacterized protein OS=Euc...	[more]
A0A059C3I9_EUCGR	1.8e-22	34.4	Uncharacterized protein (Fragm...	[more]

BLAST of Spo22568.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
FRS5_ARATH	1.0e-18	32.7	Protein FAR1-RELATED SEQUENCE ...	[more]
FAR1_ARATH	2.3e-7	25.8	Protein FAR-RED IMPAIRED RESPO...	[more]
FRS12_ARATH	1.2e-6	31.2	Protein FAR1-RELATED SEQUENCE ...	[more]
FRS7_ARATH	2.6e-6	31.9	Protein FAR1-RELATED SEQUENCE ...	[more]
FRS2_ARATH	5.8e-6	29.3	Protein FAR1-RELATED SEQUENCE ...	[more]

BLAST of Spo22568.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT4G38180.1	5.7e-20	32.7	FAR1-related sequence 5	[more]
AT4G15090.1	1.3e-8	25.8	FRS (FAR1 Related Sequences) t...	[more]
AT5G18960.1	6.6e-8	31.2	FAR1-related sequence 12	[more]
AT3G06250.1	1.5e-7	31.9	FAR1-related sequence 7	[more]
AT2G32250.1	3.3e-7	29.3	FAR1-related sequence 2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 56..143 score: 4.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated