Spo22694.1 (mRNA) | SpinachBase

Overview


Name	Spo22694.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Location	SpoScf_01427 : 78804 .. 86885 (+)
Sequence length	888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCGACATCTTTGGGACCAATGTCAATGCTCTGAAGCTGCTGCTGCTGCCACAGAAGTGGATTCTAACTTTGGTGAGGTTCTGGTCATTTGGGGTGGTAAAATTGATGAGACACAATATCAGAGGGCTTGCTTTATTTTGCGTGGTCTTTGTGGTACAGGAGGAACAAATGGGTGTTTGATAAGGTGAAAGAACCTGATGTTACTTTTCTTAATCGAGTACGCAGGTATGTGGAGGATTTTGGGGTCTATATAGAGAGCGTTTATGGTGGTACCGTACCGTCGAGACAACCTAGTGGTGCAGTTTGGATCCCCCACCTACGGGTTTGATCAAGGTGAATGTTGATGCTTCTCTTAGTGAGGAAGGTTGGGTTGGGCTTGGCACTGTAGCTCGAAATGACAAGGGTGAAGTGTTGTTCTCGGCTGTTAGGAGAATTAGAGCAAGATGGAGCCCCGTAGTGGCGGAGAGTAAGGCTGCATTCTTTGGGCTTAAGAAGGCTAGTGAGCATGGATTGTTTGACGTGATCCTGGAGTCCGACTCCGAAATTCTGATTAGTAAAATGATCAAAGGTTTTTTTATGTTTTCTGTTGTTGATAGTGTCTTGGAGGATATTGTCTCCACTAGTTGCAATTTTAACTTTCTTAGTAGGTCGCATGTTAAAAAAGATGGGAATAGCGTCGCCCATCATCTTGCGAGGTTAGTGCCGTTTGGAGTAGAGCAATGTAGGGAGAACCACTCACCTAGTGAGGTGTCCTCTTATGTACTTATGGATACTCTTTCAATTTAATAATATGCACTAATCATTTTCCCCTCAAAAAAAAAAAATTATAACATTTCAAGCCTATTCACGAGTTTAATTATCCCGTGAGTATTGTGTTCAGGTCATAGGAACTTCGAACCAAACTCCAATAGTTCAAAAACCAGAAAAATTAAACACGGCAACACCCTTGGCCGGTAAGACGGTATACCTAATTTTGGGGGTTGTTAGTTTGAGGACAATAAGGCATGAGACTCATGACAAATTGGCATACAATTGGGCTGGCGCAATTGATGCGTTACACTCTAATCTTTCATGATTTTTGGACACAACGAAAATACTCTTCAAACTCTTACTAATGAGGTTAAAGCGTGATTGACTCTGATTTTTTTGTTAGTTTTCGTTGACAAAAACCATTCCCATATCATGGATTGCTGTCATGAGTTCGAGTCCTCATTCTCACTCCGCTGGCCAGTTATTCCAATTGACCCAATTGATAGATAGGGGCTCAATCCAAGGGTCTACCTTTTATACGGAGTATAAAATAAAATTATTTCGTTTTATGTAAAATGAGAAAGGATTACACCCATTTTGATCTTATATATTTGTTTTTGTAATATTTTTGTCATAGGCCGTTTGCTAGTTTATTAACTACCATATTAGGGGGAGTTTATCCCAAGTCTCAAGATGAGTCTGGAGGTGAGTGTGGAGTGTGAGTCTTGGGATAATGTGATAAAAGACTATACCGAGTTCCATCAAAAAAAAAAAAAGACTACATCAAGTTTGAAATTGAGTTTGAAAATTCAAAACTCACTCACTCAAGACTCTACTTTGTTCTCCTACCAAATCAAATCATGACACATAATAATAGATATATACATAAAAAAAAAAAAAAAATTTTAGGAGTTAGGTGAGTCTAAAGTGAGTCTAAGGTGAGTCTGTGAATAATGTGTAAAAATAGGGAGAGTCTTATATGAGTGCAAATAATGAAATTGAAGGAAAAAGTTAGTGGAAAACTGATGTGGCAGAGTCTAAAGACTCACCCTCCCAAGTCATAAGGTGAGTCTCGAGTCTAAGCCTTGAGATAATGTGGTAAAAGATTACAACTAATTTTGAAGTGAGTTTGAAAATTCAAGACTCACTTAAGACTCCACTCTTTCTCCAACCAAATCAAATTATACCACATCATTATATTTTATCCTATTTAATTATCTTTTTTTAGGAGCTTAGTTGAGTTTGAGGGAAGTCTAGAGATAATGTGTAAAAATAGGGAGAGTCTTGTGTGAGTCGAGATAATGAAAAAATTATTGGAGAGCCGATGTGGCAGAATATGAAGATTGGGGGTGAGTCTGAGGAGTAAACTCTCTCCTGCATGTCATGTCACCATCTTTTGCCTAGTTACGTTGATACTTGATACGAAGTAGAATTAATTTTTTGTAGGATACCTTGTATGCATTATTTATGACGAGGTTAAAAAATTAAAATAAATAGGTCAAATAACGTAACCATTATAAACCACCCGCAAATTGACAGGAAAACTATAAACCACATTGTTACTTACCAAAAGATACCTAATGTTTTGTTAATGTATCATGGCAGAAGCTTAAAGTACATAATTAGTTTGTACCATAGTACAAGCTTAATATGTAAAAATCTATGTCATTTAAGGTTTTGATTAATTTGTTATTGAATTTGAATTAATTAATCCGGAAAAAAGAATTAAAGACTTATGAATTTAGAGCTCCGACCATAGTATAGACTTGAGCATTTTAAGCTCAGAGCATGTCAGAAGCTTAAATTGAATAAGTCTATACCATTGTATGAGCTTAATATCCATAACAACATTAATGCAACAATTAAATGCTTTATACAACATCAATGGAGAATGAAAAACGACATCTAACCATATTATGTTAATGCACTTAAATTTATGTATAATGATAAACAAATTCGCATTGATATTTAAAAGTCCGTAATTATAATTTGGTATTATAAAATTGGTACCGTGATCGTTAATTTGCCTTAGTTATGCTATTTCGATAATGAAATCGACGATGGTTGAGAAAGAAGATGATGAATTAATGGTTGAGGAGGAAGAAAATGAATGAAGAAACACATGAGCAATTACATTTTTTAAAAACATGATCAAAATTAATGATGATGATGGGCATTTTTTTAATACTTTTTTGAAGATGATCTCATGGTCACGATGATGGGCGATGATCGATGATGTATGGTCGATGATAGATGGACGGGGGACTGATATACAATTAATAATACGGTTTTTTCATGAAATGCCCCTGAGTTTTGCAAGAATGCACCAAATACCCTCGCGTCTTTTGAATCACATAATATACCCCTATTTTTGCCTAAGTTTCATGAAATGCACTTAGAGTTAACGGACGTTAGTCTTCCGTTAGCTGCAGTTTACCATTTTGCCCTTAATGCATGTTATTTGACATTAATTCCAAATTTCCAACTGATAAACCCTTGCATCTTCTCTCTCCTTGAAACCTCGATTTCTATCTCATCCATGAATTGGAATTGGAAAATTTTGATTAAAAAGGGAGGGCTTTATTGGAGTTTTGATCGGAGATGGCGACGGAAGCATTGGCGACGGCCGTCGGAGCGTTTTTGGTGATTTATGTACTTTTAAATCGACGATTATCGGCAAAAGAGGAGGGCCGCAGCGATGATCGGAGTAGTAATGCTGGTGAATCAACCTCGAGTCGATCGATTCAGAGGAAGATTTCTCGGCGGCCTGCGCAAGCTCCATCGACTTGGTTTGAAACGATTAATTAGTACTGGTTTCCTTCAAATCTTTTCCTGCAACAAATTGTTCATAAAAATTGTCTTTAACAGACCCTAAAATCGCCTGGAGAAACCCAACCCAGAAATCTCAAGAAATCTTGACCGCATAACCCAAATACCCATATCAACCACAAGATCAATTGATGCCATGTTTAGATTGAACACTGATCTTATCAATTTTGTGTTTGAAAACTTGAAAACAACTTCTGGGTATCCTCAAAATCAAGAATTGAAGAGGAAGAAGAGATTCGATGAATTGAGGAGGAAGAAAAGCTTAGATGGAAGAAGAGCTTCTGGGTATCCTCAAAATCAAGGTTCCGGTTCCGGTTCCGGTTTCAGCTTCGGTTTTTCATCGAAAGTAAGAGGTAAAACGGGTAAGGGAGATGGAGAAGAACTCAAAGCCTTTGTGATTTGGTTAAATATCTGAAAAACCTTTGGTGTAACTCGGATGGCCATCAGTTTTTAATAATCCCCTGTGTTTTCTCTCTGTTTTTGCTCTGTTTCTTCCTAATATCGAAAGTCATTGAATATGTGTCCAGCTATTGTAATTCAGGCGCTTATAATCCTGATTTGTCCTTATCAATTCAGTAAAGTACCAGTAATTCCTAAGATTTGTTTATGTTTGAACTTCAGATTAATTCTTATTCTTTATCTGCTTCTTAATGAAGAAATCATTAGTTATCAAATTGATTCCAGTTACTCGTGCTTATTTCCCAATTTGCTTTGCTATAAATTGGTCACATTGATTACATAATGATGATGCCTGATTGCCTGTGGGTGTTACAAATCAGGTCGTAAGGTGATATTGATATCATTTAATTATGCTTGCATCTAAAAAATCAAGTAGGTGTTGAACTTGAACTTGGGATATGTCATGCTTCCATCAATGTCCTACCTTCCCATGTGTCAATGATTGCTGAGATTGAATTGGTCTGAAGCTTGTTACTCTTCAAATTATATATTTTTTCACAGTAGCAAGGCTTGCATTGCATCATTAAAGATGATTTATATACGGCTTGCATTGCAATTTGGGTATTTGGTGCAAATAAGTTTACAAATAGGTGTATATTGTGCAATTAGTTTATAAATAGGGGGCATGTGATGAATTATAAACATGACTTAACGGAGGACTAACAGAAGGTCGGATTAGTGGTATTTGGTGCAAACTTAGGCAAAGATAGGGGTATAATATGTGATTCAAAAGACGCGAGGGTATTTGGTGCATTCTTACAAACCTCAGGGGCATTTCATAAAAAAACCGTAGATTATAATTCACTTTCTCTCTCAAATAATAATTGGCGTAGTCCATCTCTTCGTTCCTCCCGCAATCGCAACCTCCTCCTCCTCCTCCTCCTCCTCCTCTTAACTCCCTAAAGACAATATCAGCATATTTAGTTGTAGTTGGATCTGTAGTCGGCGACACCTCTGCGAACCACTCTCCTCTGCTGCTATTTTCGGTAATTATCCACAAAGATTTTGTATCGATTTTTCTGTTGATTTTTATTTGTATTTTTATTGATTTAAAGATAAATTTTCTAAATTGTTAAAATATTCTGTTGGTTTTTTTGTTTTGTTATGATTCGATTTTTCTGATAGGATGAGTTTCAAAAATATTCCTGTTGGGTTTGTTTTGGTGTTTTTCATGATAAATCTACCTGAAATTCGGTTAATCCTTTTTTATATGATACAATTTTTCCTGACAATCACCGTTCATCTCTCCTGCATCAGGAACGGGAATAGTATTGCTGATTGCATATTGCTTTCTATGATCATATCAAATGAGTAGATTTCCTAATCGCAAACTGCTTTTCAATTTTATGATGTTTCTCAATCTCGTAGCATTGAATTTTTAGTCTTTATCTTTGATTGCGTTGAGTTATGCTAATTCATCACCTATATCAAATTTATGATAAATTAACATGTCGATGAAGTTGTTCTTAATTGCATGTTATTTTTTTATTTTTAAAATGATTTAATTAATTGGTATACTATCTACTAGGTACTCCTTAGTAATCAATTTGGAATTGCATAAAATCGAGTCATTCATGTATCATGTTTAGTTCATCACCACAAGTCTTGTGATAGAGTTCCCTTTTTATTGCATTTTTCAACAAAGTTTGATTGAAGAAATGATTGCTTAAATTGGATAAATTTGCGAACAATTACCTTTTACTTTTCTTTTTTGTACCTTAAACTACTCTGTATGATTTTGTGTTCGATACACTATCACTTTACAGTTTTCACATTTTAAAACCAAGATATCTCTTTCGTTTCTTAATCGTATTAAGAGTGAATCAAAGTCTATTCTCCCTTTTCTGTGTAACGATTATATCGTGCTTTTGCAACTTTGTGAAGGATCAAAAAATATTTATTCACTTTTAAAATATTTGTGAAAGATCAAATGAGTTGTTTTGCAAATAAAGGACACCATGAAATCCTTACAGAAGCATGAATTTTGAATCGCTTAAAGCGGTTAACCGGTGTTTCTGACACAAAAACATAGTTTAAGTAGTTGTTTACGACAAACAAGAAAAAGGTAAAAGGTAGTTGTTCGCAAAATTGGTAAATCTAAAGGTAGTTGTTCGCAAATTTTCCTAGTTTTAATTAGTTTCTTGTTCAATTTCCATTGCCAATGTTTTATATAAACATCTCTTTACATTTCAGCTAAATTAGGCCGGTATCAACACGCTTCATTGGAGAGATGATTTATTGCTTAACATGGATAAGTGATCTTTGGAAACATGTTTTTTGTCAATCCTTGGGTAGTAGTAGCGGGACTTCAATCTCAAGTCTCCCAGATGATATAATCACGGATATTATCGCTCGACTCTCCACTAAGAATGTTTTAACATGTAAATTAGTTCATTTACAATGGCACCAGTTGTATTCCACCCCATATTTTGCTGAAATCCATCTTGCTAATGTTACTCCTATCATTTTAGTAGAAGATAGATGTAGGTGGACTAGGGTGAAAACAACATTATTATTGGAAGGTTATGGGAAGAAATCAAAGTTAAAAAAAATATGCATGAAAAATTTGGAAATAATGAATAAATATCGATTTGGACTTTATAATTCTTGCAATGGGTTCTTCTCTACATGAAGTTGGATAAAGAATACATTACTCCAAAGTATCTGATTTACAATCCACTTACAAAAGAAATTTTTTACTTCTGCGAAGAAAGATGTAGGATTTGGGGATTCTTCTTTCATCAATTGGAAAGAGACTACAAGCTTCTAGTTTATCGTTTCGACAAAATTAATCAAACATGTCATTATTATGTGTATGGTTTTAATACAAAGGATAAGAGAAAGTTAGGATCTTTTCCTTATTATCCTTTGTTGTTTAGTAATCATGCTGTTCTAGTGTGTGGAGCTCTGTTTTGGTTGGTTGCGGGCCTTAAAACAAAAGAATGTTCCAAATCTATAATGATGTTTGATTTGAAGTCGGAAAATATTCATGTCATGCCTCATCCAGGACCTAGTTGTACACGTAGCTTTTATCTAGAAAACTGGAAGCTACATTACCAAATGGTACTTTTGGAGATAGATGGGAGATTATCTTTGTCCAACGTATGTAAGGAGACTGTTGAAGTATGGATTCTGGAAGACCTTGCTAATTGGGTGTGGGTAAAAAAGTATGCAGTAAACCTTGATATACCTTTTGACCATGATGCATGTCATTCCCATCCGGTTGTGCTCTTCCAAAGTGGCAACCTTTTGTTAAATTGGCCTGCTAGAGGGCCGTTCTGGTGTAACCTAAGCTTGAACTATCTTTGTAAAATTAAATTAGATCTTAATAAAGTGGACAGTGATTTTGTTTTTTATGCTACCCAATACACCAGCAACTTTGGCTCCCTGAGAGGCTCCAACATATTTTACGATTCCTTTAAAAGTTGTGACATATTTCCTAGTTGCTCTACTAGTCTGTGACATTGCCTCCCCCGCTTCTCTAGCCCTTTTAAAAGCTTTACTGTTTCCAGTGCTAGTTTGCTGAGTGTGTGCCTTATGAACACTACTCTTCAAGTGCTGCTTTTTTACCTTTTTTAAAAAAATTATTTTCTTCTGCCTTTTCCTCCTCACCACATCTCCTCTCTTTTTCTTTCTTTCATCCTCCGTAATCTTGATCTCAATCTTAATCTATACACCCTAGGTTTTCCTTTTTTCCTCTTAGATCCCATCTTAATCTACATTTTCCCTCACCCCCTTTTATCTCAATCCACAAACCATCCGTTTTCAGGTATCCTAATCAATCTCAATCCACATACCATAGGTTTTCAGATATCGTAAATCTCACTTGTTATTATCGGAGAAAATGGTTACTAAGTTGAACAGGCAAAATTGGATGGCGCAAAGTTGAAGAAATTAGACTTTCAAGTGCTGCACGGGGGATGAGGTATTTGCGAGTATCATCTTCGTTAACTTTTCCTTGGTGCGTAATTCTCTCACATCTCTGTATTTGCTCTTTTTTTTCCTTCTTTAACTATTGCTGATTATTTGTGATGTTTAGA

mRNA sequence

ATGGTGCGACATCTTTGGGACCAATGTCAATGCTCTGAAGCTGCTGCTGCTGCCACAGAAGTGGATTCTAACTTTGGTGAGGTTCTGGTCATTTGGGGTGGTAAAATTGATGAGACACAATATCAGAGGGCTTGCTTTATTTTGCGTGGTCTTTGTGGTACAGGAGGAACAAATGGGTGTTTGATAAGTTTGGATCCCCCACCTACGGGTTTGATCAAGGTGAATGTTGATGCTTCTCTTAGTGAGGAAGGTTGGGTTGGGCTTGGCACTGTAGCTCGAAATGACAAGGGTGAAGTGTTGTTCTCGGCTGTTAGGAGAATTAGAGCAAGATGGAGCCCCGTAGTGGCGGAGAGTAAGGCTGCATTCTTTGGGCTTAAGAAGGCTAGTGAGCATGGATTGTTTGACGTGATCCTGGAGTCCGACTCCGAAATTCTGATTAGTAAAATGATCAAAGGTTTTTTTATGTTTTCTGTTGTTGATAGTGTCTTGGAGGATATTGTCTCCACTAGTTGCAATTTTAACTTTCTTAGTAGGTCGCATGTTAAAAAAGATGGGAATAGCGTCGCCCATCATCTTGCGAGATTGAACACTGATCTTATCAATTTTGTGTTTGAAAACTTGAAAACAACTTCTGGGTATCCTCAAAATCAAGAATTGAAGAGGAAGAAGAGATTCGATGAATTGAGGAGGAAGAAAAGCTTAGATGGAAGAAGAGCTTCTGGGTATCCTCAAAATCAAGGTTCCGGTTCCGGTTCCGGTTTCAGCTTCGGTTTTTCATCGAAAGTAAGAGGCAAAATTGGATGGCGCAAAGTTGAAGAAATTAGACTTTCAAGTGCTGCACGGGGGATGAGGTATTTGCGAGTATCATCTTCGTTAACTTTTCCTTGA

Coding sequence (CDS)

ATGGTGCGACATCTTTGGGACCAATGTCAATGCTCTGAAGCTGCTGCTGCTGCCACAGAAGTGGATTCTAACTTTGGTGAGGTTCTGGTCATTTGGGGTGGTAAAATTGATGAGACACAATATCAGAGGGCTTGCTTTATTTTGCGTGGTCTTTGTGGTACAGGAGGAACAAATGGGTGTTTGATAAGTTTGGATCCCCCACCTACGGGTTTGATCAAGGTGAATGTTGATGCTTCTCTTAGTGAGGAAGGTTGGGTTGGGCTTGGCACTGTAGCTCGAAATGACAAGGGTGAAGTGTTGTTCTCGGCTGTTAGGAGAATTAGAGCAAGATGGAGCCCCGTAGTGGCGGAGAGTAAGGCTGCATTCTTTGGGCTTAAGAAGGCTAGTGAGCATGGATTGTTTGACGTGATCCTGGAGTCCGACTCCGAAATTCTGATTAGTAAAATGATCAAAGGTTTTTTTATGTTTTCTGTTGTTGATAGTGTCTTGGAGGATATTGTCTCCACTAGTTGCAATTTTAACTTTCTTAGTAGGTCGCATGTTAAAAAAGATGGGAATAGCGTCGCCCATCATCTTGCGAGATTGAACACTGATCTTATCAATTTTGTGTTTGAAAACTTGAAAACAACTTCTGGGTATCCTCAAAATCAAGAATTGAAGAGGAAGAAGAGATTCGATGAATTGAGGAGGAAGAAAAGCTTAGATGGAAGAAGAGCTTCTGGGTATCCTCAAAATCAAGGTTCCGGTTCCGGTTCCGGTTTCAGCTTCGGTTTTTCATCGAAAGTAAGAGGCAAAATTGGATGGCGCAAAGTTGAAGAAATTAGACTTTCAAGTGCTGCACGGGGGATGAGGTATTTGCGAGTATCATCTTCGTTAACTTTTCCTTGA

Protein sequence

MVRHLWDQCQCSEAAAAATEVDSNFGEVLVIWGGKIDETQYQRACFILRGLCGTGGTNGCLISLDPPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGLKKASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDGNSVAHHLARLNTDLINFVFENLKTTSGYPQNQELKRKKRFDELRRKKSLDGRRASGYPQNQGSGSGSGFSFGFSSKVRGKIGWRKVEEIRLSSAARGMRYLRVSSSLTFP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo22694	Spo22694	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo22694.1	Spo22694.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22694.1.exon.1	Spo22694.1.exon.1	exon
Spo22694.1.exon.2	Spo22694.1.exon.2	exon
Spo22694.1.exon.3	Spo22694.1.exon.3	exon
Spo22694.1.exon.4	Spo22694.1.exon.4	exon
Spo22694.1.exon.5	Spo22694.1.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22694.1.CDS.1	Spo22694.1.CDS.1	CDS
Spo22694.1.CDS.2	Spo22694.1.CDS.2	CDS
Spo22694.1.CDS.3	Spo22694.1.CDS.3	CDS
Spo22694.1.CDS.4	Spo22694.1.CDS.4	CDS
Spo22694.1.CDS.5	Spo22694.1.CDS.5	CDS

Homology

[Close]

BLAST of Spo22694.1 vs. NCBI nr
Match: gi|731338769|ref|XP_010680492.1| (PREDICTED: uncharacterized protein LOC104895629 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 148.7 bits (374), Expect = 1.600e-32
Identity = 70/129 (54.26%), Postives = 97/129 (75.19%), Query Frame = 1


		  
Query: 67  PPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGLK 126
           PP+GL+KVN DAS++ EGWVGLG VAR+DKG VLFSAVRR RA W P VAE+KA +  + 
Sbjct: 232 PPSGLVKVNADASVNGEGWVGLGAVARDDKGSVLFSAVRRTRAWWPPDVAEAKAIYMAVL 291

Query: 127 KASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDGN 186
            A  HGL +V++ESD+++L+S++       S +D++L DI++    FN +S SHV++DGN
Sbjct: 292 WAKHHGLKEVVIESDAQVLVSRLSSAALFHSDLDAILGDIINLCSWFNIISFSHVRRDGN 351

Query: 187 SVAHHLARL 196
            VAHHLA++
Sbjct: 352 YVAHHLAKV 360

[Close]

BLAST of Spo22694.1 vs. NCBI nr
Match: gi|731377399|ref|XP_010667861.1| (PREDICTED: uncharacterized protein LOC104884854 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 147.5 bits (371), Expect = 3.600e-32
Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 1


		  
Query: 55  GGTNGCLISLDPPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPV 114
           GG      S   P  G+IKVN DASL+ EGWVGLG VAR+  G+VLF+AVRR+RA W   
Sbjct: 164 GGVQESAKSWKAPARGVIKVNCDASLACEGWVGLGVVARDSDGQVLFAAVRRVRAHWPVE 223

Query: 115 VAESKAAFFGLKKASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFN 174
           +AE KA    ++ A   G   V+ ESDS+ILIS++ K    FS +D+VLEDI+ +S  F+
Sbjct: 224 IAEGKALLMAIRMAKRFGYDHVVFESDSQILISRLSKAMVYFSDLDTVLEDILLSSSYFS 283

Query: 175 FLSRSHVKKDGNSVAHHLARLNTDLINFVFEN 207
            LS SHVK+DGN+VAHHLA++    +  ++EN
Sbjct: 284 SLSWSHVKRDGNAVAHHLAKIVPFGVEQIWEN 315

[Close]

BLAST of Spo22694.1 vs. NCBI nr
Match: gi|731322533|ref|XP_010671945.1| (PREDICTED: uncharacterized protein LOC104888619 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 145.2 bits (365), Expect = 1.800e-31
Identity = 69/141 (48.94%), Postives = 99/141 (70.21%), Query Frame = 1


		  
Query: 66  PPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGL 125
           PPP G++KVN DASL+ EGW+G+G V+RN+ GEVLF+A RR+RA W P +AE KA    +
Sbjct: 576 PPPAGIVKVNSDASLAVEGWIGMGAVSRNENGEVLFAATRRVRAWWPPEIAECKALLLAI 635

Query: 126 KKASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDG 185
           K A  +G  ++ILESDS++L++++ +     S  DS+LEDI+  S + + +  SHVK+ G
Sbjct: 636 KLAKRYGYDNIILESDSQVLVNRLSRAAIFLSDFDSILEDILFLSSSLSTVVWSHVKRGG 695

Query: 186 NSVAHHLARLNTDLINFVFEN 207
           N VAHHLA+L    +  V+EN
Sbjct: 696 NYVAHHLAKLVPFGVEQVWEN 716

[Close]

BLAST of Spo22694.1 vs. NCBI nr
Match: gi|731318547|ref|XP_010669786.1| (PREDICTED: uncharacterized protein LOC104886930 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.8 bits (364), Expect = 2.400e-31
Identity = 75/144 (52.08%), Postives = 99/144 (68.75%), Query Frame = 1


		  
Query: 63  SLDPPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAF 122
           S   P  G +K+N DASL  +GW+GLG VAR+D+G VLF A RR+RA W   +AE K   
Sbjct: 223 SWQAPGAGFVKLNCDASLVVDGWIGLGVVARDDEGRVLFVASRRVRATWLVEIAEGKVLL 282

Query: 123 FGLKKASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVK 182
             L+ A   GL +VILES+S++LIS++ K    FS +DSVLEDI+S SCNF  +S SHVK
Sbjct: 283 MALRLAGRFGLQNVILESNSQVLISRLSKAMTYFSDLDSVLEDILSLSCNFLSVSWSHVK 342

Query: 183 KDGNSVAHHLARLNTDLINFVFEN 207
           +DGN VA+HLA+L    +  ++EN
Sbjct: 343 RDGNVVANHLAKLVPFGVEQIWEN 366

[Close]

BLAST of Spo22694.1 vs. NCBI nr
Match: gi|731328399|ref|XP_010675026.1| (PREDICTED: uncharacterized protein LOC104891074 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 144.4 bits (363), Expect = 3.100e-31
Identity = 76/141 (53.90%), Postives = 97/141 (68.79%), Query Frame = 1


		  
Query: 66  PPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGL 125
           P P G+IK+N DASL+ EGWVG+G VARN+KGEVL +AVRR+RA WS  VAES+A  F +
Sbjct: 27  PLPVGVIKLNADASLAVEGWVGMGVVARNEKGEVLLAAVRRVRAWWSREVAESRALLFAI 86

Query: 126 KKASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDG 185
           K A ++G    ILESDS +L+S++ K     S  DSVLEDI+  S  F  L  SHV++ G
Sbjct: 87  KLAKKYGYEASILESDSHVLVSRLSKAVVFMSDFDSVLEDILFFSSGFRSLVWSHVRRGG 146

Query: 186 NSVAHHLARLNTDLINFVFEN 207
           N VAHHLA +    +  V+EN
Sbjct: 147 NYVAHHLANIVPFGVEQVWEN 167

[Close]

BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
Match: F4NCJ4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.300e-30
Identity = 68/129 (52.71%), Postives = 91/129 (70.54%), Query Frame = 1


		  
Query: 67   PPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGLK 126
            PP G IK+N DASL+EEGWVGLG +AR+ +G+V F+A RR+RA W P VAE KA +   +
Sbjct: 1201 PPVGAIKLNTDASLAEEGWVGLGVIARDSEGKVCFAATRRVRAYWPPEVAECKAIYMATR 1260

Query: 127  KASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDGN 186
             A  HG  DVI ESDS +   ++ K    FS +D++L DI+S    F+ +S SHVK+DGN
Sbjct: 1261 LAQAHGYGDVIFESDSLVATKRLTKAAIFFSDLDAILGDILSMCNAFSSVSFSHVKRDGN 1320

Query: 187  SVAHHLARL 196
            +VAH+LAR+
Sbjct: 1321 TVAHNLARV 1329

[Close]

BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
Match: F4NCJ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.500e-27
Identity = 67/140 (47.86%), Postives = 95/140 (67.86%), Query Frame = 1


		  
Query: 67   PPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGLK 126
            PP   IK+NVDASL+ +GWVGL  +AR   G VLF+AVRR+RA W+P +AE+KA    +K
Sbjct: 1198 PPADSIKLNVDASLAVDGWVGLSVIARRSDGGVLFAAVRRVRAYWAPEIAEAKAVELAVK 1257

Query: 127  KASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDGN 186
                +GL  VILESD +++I+++ K     S +D VL +I+++   F+ +  SHVK+DGN
Sbjct: 1258 LGRRYGLQRVILESDCQVVINRLSKNAIFLSDLDLVLFNILASCTYFSSVVWSHVKRDGN 1317

Query: 187  SVAHHLARLNTDLINFVFEN 207
             VAHHLA+L    +  V+EN
Sbjct: 1318 YVAHHLAKLIPFGVEQVWEN 1337

[Close]

BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
Match: F4NCJ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.500e-26
Identity = 62/140 (44.29%), Postives = 94/140 (67.14%), Query Frame = 1


		  
Query: 67   PPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGLK 126
            PP  +IK+NVDASL+  GWVGL  +AR+  G VLF+AVR++RA+WS  +AE+KA    L+
Sbjct: 1198 PPPEVIKLNVDASLASAGWVGLSVIARDSHGTVLFAAVRKVRAQWSAEIAEAKAIEMALR 1257

Query: 127  KASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCNFNFLSRSHVKKDGN 186
                +G   +I+ESD +++++++ K     + +D +L +I S+  NF  +  SHVK+D N
Sbjct: 1258 LGRRYGFAAIIVESDCQVVVNRLSKQALYLADLDIILHNIFSSCINFPSVLWSHVKRDAN 1317

Query: 187  SVAHHLARLNTDLINFVFEN 207
            SVAHHLA+L    I  ++EN
Sbjct: 1318 SVAHHLAKLTPFGIEQIWEN 1337

[Close]

BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
Match: F4NCI7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.100e-18
Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 1


		  
Query: 53   GTGGTNGCLISLDPPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWS 112
            G+GG  G      PPPTG+ KVN DA LS  G VGLG V R + G +    V+R+ ARW+
Sbjct: 1193 GSGGGCGSSALWSPPPTGMFKVNFDAHLSPNGEVGLGVVIRANDGGIKMLGVKRVAARWT 1252

Query: 113  PVVAESKAAFFGLKKASEHGLFDVILESDSEILISKMIKGFFMFSVVDSVLEDIVSTSCN 172
             V+AE+ AA F ++ A   G   ++LE D+ ++I+ +       + +  +  DI S    
Sbjct: 1253 AVMAEAMAALFAVEVAHRLGFGRIVLEGDAMMVINAVKHKCEGVAPMFRIFNDISSLGAC 1312

Query: 173  FNFLSRSHVKKDGNSVAHHLAR 195
             +  S SHV++ GN+VAH LAR
Sbjct: 1313 LDVFSVSHVRRAGNTVAHLLAR 1334

[Close]

BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUB5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g056350 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.600e-10
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 1


		  
Query: 66  PPPTGLIKVNVDASLSEEGWVGLGTVARNDKGEVLFSAVRRIRARWSPVVAESKAAFFGL 125
           PPP G++K N D +    G +GLG V RN +G V+ + V R+RA W    AE  AA  G+
Sbjct: 218 PPPRGVVKFNSDVAFLAGGMIGLGAVGRNAEGVVVAAVVTRVRAEWDVKTAELAAAKLGI 277

Query: 126 KKASEHGLFDVILESDS 143
             AS  G +DV+LESDS
Sbjct: 278 STASRLGYWDVMLESDS 294

The following BLAST results are available for this feature:

BLAST of Spo22694.1 vs. NCBI nr
BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
BLAST of Spo22694.1 vs. ExPASy Swiss-Prot
BLAST of Spo22694.1 vs. TAIR (Arabidopsis)

BLAST of Spo22694.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731338769\|ref\|XP_010680492.1\|	1.6e-32	54.2	PREDICTED: uncharacterized pro...	[more]
gi\|731377399\|ref\|XP_010667861.1\|	3.6e-32	50.6	PREDICTED: uncharacterized pro...	[more]
gi\|731322533\|ref\|XP_010671945.1\|	1.8e-31	48.9	PREDICTED: uncharacterized pro...	[more]
gi\|731318547\|ref\|XP_010669786.1\|	2.4e-31	52.0	PREDICTED: uncharacterized pro...	[more]
gi\|731328399\|ref\|XP_010675026.1\|	3.1e-31	53.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo22694.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
F4NCJ4_BETVU	5.3e-30	52.7	Uncharacterized protein OS=Bet...	[more]
F4NCJ6_BETVU	5.5e-27	47.8	Uncharacterized protein OS=Bet...	[more]
F4NCJ0_BETVU	3.5e-26	44.2	Uncharacterized protein OS=Bet...	[more]
F4NCI7_BETVU	6.1e-18	39.4	Uncharacterized protein OS=Bet...	[more]
A0A0J8CUB5_BETVU	3.6e-10	46.7	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo22694.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo22694.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 71..199 score: 4.68
None	No IPR available	PANTHER	PTHR33033	FAMILY NOT NAMED	coord: 66..195 score: 4.9
None	No IPR available	PFAM	PF13456	RVT_3	coord: 75..195 score: 8.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding