Spo22919.1 (mRNA) | SpinachBase

Overview


Name	Spo22919.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	DNA polymerase III polC-type
Location	chr4 : 20825109 .. 20829204 (+)
Sequence length	1838

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTNGGGTAGTAGGTAAGTGTGAGAAATAATATAATATTGGTAAAGATTTCCATTTATAGAAGCGGTGTAAGTATTAAAAGACGGTCCAAAAAGAAAAGCGGTGCAAGTATTAAGGGACGGAGGGAGTATTATAAATATATGTTACATAAATGACATATTTGAGAACGAAATTGATTTGAACAGGTTCAAAACTACCCCCAATAGGCAAATATCCCACCACACCATCATTACGAGAGCTAATTTTATGGGATTGTGTAATTGCGTAGGCAAAAGTCCGTAAAACTATAGAAGGAATAGAAAAAAGAAATGAAAATGAATTGAAAAATCAGAAGTAAACCCGTAAAAAACGGAGCTAGATCTTGATCCGAGTTTGAAGGAGTGGGTGGGTTAATCCGGTCTCACAGCAATCATCCATTTTTCCAATGCTTGCGTCTCTTTCTCTCTCCTCGCACATGTGTTACGGTTGCTAATGCTTTTCTTGCCCCGCTTAACTGCCTTTTCTCTCCTCCTATAAAATTCGATTAACCCAAATTAAGAAAAACTACTTCCCTGGACGTTTCAACAAATGCAGTTCCTCCTCATTGGCAGTTGATTTCAAGGTTCGTCTTTTCTCTTACTCTTTCAACTGGGTTATTCAATGCATTTTTGTTGTATCAATTGTTTTGATTGATCAGGTTACATGATGTGCTTCAAGTTTCTAGCTTTGTGAAATGATGCTTAGATTTGATGAACTTAGACCCAGATTGCTATTTTGGTTAGTTTGGATTAAAATTGAAATCCCAATTCATTGAATTTTCTGGGTATTTGAGTGTTTGCTTGTTTGGACTTTTTATCTTTGTCATTTTCAAAATTTCAATTCTGTTTGCTTTCAATTGATGATTGAATTAATGAGTATTGTCTTATTGGAAATCTGCCAAGCCAGTGAATCATAGATTGGTATTTATGGTGATGATCTTTTTCCAATTACCTTTAGCAAGTCAAATGGTTAAAGAGCAGGGAAAATTGGATAATAGTTGGTTAATTTTATTTACTGCAACAGTGATCGGTTTGAATTAGGTTAGCAAGTAGCAATTTTGCATAATGTTGTCTTTTCCAGTGCTGTTGAAAAGTGATTTCTGTATGTGTTTGTGTGTCTGCATTGTGTTATATACTTATATGCGATTCACAGTCATGTCAGCCAATTATTGAATCCGGGTTTTAATGTTCGTCTGGTTATGGATCCAAGTATGAGACAACTTGATTTGGTGCCTGCATTGTGTTGGAGTATATGCACCTCATATTCTCATAGATTGACCATTGCCTCTTTCGAATCCCATAGCTGGTATACTAGGGATTTTTGTTGGTTTTTATCCAGAATATTGCTGGTTTCTTATTCAGATGTCGCCATGCCATTGCATGATAACTACATCCATCATCGGGATATCAACAAATGCTTGCAACAGTTCTTTGAAATGGACATGTTTCACATAGGGGTATTATTTGTTGGTGTCCAGTAGGTTGTTCCTGAATAAATGACCTGTTCATGGTACACAGCTTATGTGACATTTTAGGAGTATTTTGTTGTTAACATTATCAATCTTATATTCCACGAATAACATCCAGCAGAGAGATATTTGTGCTTTATTAAACAAAAGAGATGAGAGAGGGTCTTTTATTGGCCTAGATGATAAATTGCAGCTGCAGATTTATTAGTGGATTAAAATGGTTGTGGTTTTCCGACTTTGTATATTTTACTGTTGTCAATTTTGTTATTCTAATTGTCAGCATCTTGATCCTTGGTTCGAAATTGNATATTTTACTGTTGTCAATTTTGTTATTCTAATTGTCAGCATCTTGATCCTTGGTTCGAAATTGACAGGGGATCAGGCTAAAATTATTGCCGAGAAGTGAATGAATTAGTAATTTGAGAAACATGACTACTCTTTTTCCTGTTTGGATATAAGGTTTCCGCAGAAAATCAGCACAAATAGACTTAGCAAACTATTGCTCTTTTATCCATCTCCATCCATTATTCTGTTACATATGACAAGAAACTTCTTGTTTTTAATTTTAGTCTATTACTTAGGTTAAATGTTCTGCATTTTCAGGTAAACAAAAAAGTGGGAAAGGATCTGTCTGTTTTTACCCTTGTACTTATTTCAGATCTGTGCTTAGTTTGCGGAAGGAAACTTTTAGCTGGAGCTAATTTTTATTTTTTTGCTAACCTAAGATGGTGAACTTTTGTGCTAGTTGCATACCCTATAAGGTTGAACTCAGCAACTCACATTTTACATCCGTTGCAACTGCTATCATCAGGTCTGAACTATCTGTTTCTGATGCAAAATCCCTTGCTTTTCTGGTTTTGCCGGTGTTCGAACACTTTAAGTTCAGATGAGAACAGCCCCAATGTGTTACTCGATCTTGCGAGTCCCTAGATTCAGAGTTTGCTCTTTGGTTAATGCATGGTGGGAAGGCTCTGACTCTGTACGTCCAACATGTAGAAACGTATCCAATTTTAGGGTACTAAATTCCAGTGTTGGTGGTCGTGAAAGAAATGGAAGTTGGAGTCGGAGACCCTTAACAACTGCAGGTGAAGGAATTAGCAAAAACTCCTTGAGCAGTGCAGGCAATGTCAGGCTTGACTTATCAAATAAAGTAATTGCGAATACAACCACAGACTTGAAAAAAAGCGTAACTGATGGTAGCAATGCAGATATTCGACAACTGATAGCTGAAAATAAGGATTTGGCTAGCCTTGCAACTTTTATTGTCTTTGATCTTGAGACAACTGGCCTTGACAGAAAATCTGAAAGAATTATCGAGATTGCGCTTATGGACCTCGGTGGTGATGAACACAACACTTTTAGCACTCTAGTTAATCCTGATCGTAATGTCCTAAATTCAGACATCCATAATATTAAAACCGAGATGGTCAGAAATCGTGATGTTCCAAGGTATTTCAACTAGTATCTTCTACAAACTTGATTTTCACAAGTACATTTTGTTATTTGTGGTGTACCACTGTACAAAAGATTTGGCCTGCGCTTTGTTAACTAGTTACTGCTTTTTTAATATCTTCATACCATCTTAGAATAGATAGGAAATGTGTGATTGGCAGTTAATTCTCCCCCTGCCCCTGTAACTGAAGTTTGTCATGATAGTCACAAACTTAATTATGTAAGAGAATCTTACACCATGCGTAAATTTTCTACATTCAGTGTCATTCCTCACTCTTTCAGTCTCTTTCTGTTCCCTCTTTCCTTGAAATTTCCTCTTTCAAACACGCTATTAGCCTGATTTGTTTATTTTTCTTGTTGTTTATCTCATTACATAGCTTGAGTAGGATAATTTGAACTAATCCTCATGAATTTTAGATGACTATACCGGTAGAGTGATTTTGACGTGTTTTGGTTTGGATCTGATGTAGGATGGACCAACTTATTCCAATACTGCTACAGTATGTGAGAAGCCGTCAGAAGCCAGGGGGATATGTGGTGTTAGTCGCACATAACGCTAGAAGTTTTGACGTTCCGTTCCTGGTTAATGCATTTAAACGACATGGTTTTGAAATCCCTTCAAACTGGTTTTTTTTGGATACTCTTCCTTTAGGGCGTCAAGTACTGAAAGCCGCAGGTGTTGACTCTTTCTTTTCTTTATCTCCCTCCCCCCTCTTTTTTGGCTGAGTTATTGTCATCTTAAGTTGTCCTTTTGGTTGTCATCAGGAGTAACAACTGGGTGCCGGTTGCAAGGACTTCGTGAGCATTATGAAATCCAATTAGAAGGTCCAGAGCACAGAGCCATGTCAGACGTGCTTGTTTTATCACTGGTGTTTCAGAGAATTACCTTTGATCTCAAGCTTCCAATCCACGAGCTTGTGCAGAAGGCTTTTACTGCTGATGAATTAACAAGTAGCAGCGCGAAGAATAGAAGTGCAAAGAATAGAAGTCCGAAGAAGAAAAAAGACTCAAGCTAGCTAGTTCTGTTCTTCCTTGTTGTCATTACTACTGTATCATCCATTGTTGTTAATTTATGTGATTTAATTCTTCTAATTTTAGGTGAATCACTCATTGTAATCCCATTCTCTTGGGCATTTATAGAAATGAAAGCAAAATTTTAG

mRNA sequence

GTNGGGTAGTAGGTAAGTGTGAGAAATAATATAATATTGGTAAAGATTTCCATTTATAGAAGCGGTGTAAGTATTAAAAGACGGTCCAAAAAGAAAAGCGGTGCAAGTATTAAGGGACGGAGGGAGTATTATAAATATATGTTACATAAATGACATATTTGAGAACGAAATTGATTTGAACAGGTTCAAAACTACCCCCAATAGGCAAATATCCCACCACACCATCATTACGAGAGCTAATTTTATGGGATTGTGTAATTGCGTAGGCAAAAGTCCGTAAAACTATAGAAGGAATAGAAAAAAGAAATGAAAATGAATTGAAAAATCAGAAGTAAACCCGTAAAAAACGGAGCTAGATCTTGATCCGAGTTTGAAGGAGTGGGTGGGTTAATCCGGTCTCACAGCAATCATCCATTTTTCCAATGCTTGCGTCTCTTTCTCTCTCCTCGCACATGTGTTACGGTTGCTAATGCTTTTCTTGCCCCGCTTAACTGCCTTTTCTCTCCTCCTATAAAATTCGATTAACCCAAATTAAGAAAAACTACTTCCCTGGACGTTTCAACAAATGCAGTTCCTCCTCATTGGCAGTTGATTTCAAGGTCTGAACTATCTGTTTCTGATGCAAAATCCCTTGCTTTTCTGGTTTTGCCGGTGTTCGAACACTTTAAGTTCAGATGAGAACAGCCCCAATGTGTTACTCGATCTTGCGAGTCCCTAGATTCAGAGTTTGCTCTTTGGTTAATGCATGGTGGGAAGGCTCTGACTCTGTACGTCCAACATGTAGAAACGTATCCAATTTTAGGGTACTAAATTCCAGTGTTGGTGGTCGTGAAAGAAATGGAAGTTGGAGTCGGAGACCCTTAACAACTGCAGGTGAAGGAATTAGCAAAAACTCCTTGAGCAGTGCAGGCAATGTCAGGCTTGACTTATCAAATAAAGTAATTGCGAATACAACCACAGACTTGAAAAAAAGCGTAACTGATGGTAGCAATGCAGATATTCGACAACTGATAGCTGAAAATAAGGATTTGGCTAGCCTTGCAACTTTTATTGTCTTTGATCTTGAGACAACTGGCCTTGACAGAAAATCTGAAAGAATTATCGAGATTGCGCTTATGGACCTCGGTGGTGATGAACACAACACTTTTAGCACTCTAGTTAATCCTGATCGTAATGTCCTAAATTCAGACATCCATAATATTAAAACCGAGATGGTCAGAAATCGTGATGTTCCAAGGATGGACCAACTTATTCCAATACTGCTACAGTATGTGAGAAGCCGTCAGAAGCCAGGGGGATATGTGGTGTTAGTCGCACATAACGCTAGAAGTTTTGACGTTCCGTTCCTGGTTAATGCATTTAAACGACATGGTTTTGAAATCCCTTCAAACTGGTTTTTTTTGGATACTCTTCCTTTAGGGCGTCAAGTACTGAAAGCCGCAGGAGTAACAACTGGGTGCCGGTTGCAAGGACTTCGTGAGCATTATGAAATCCAATTAGAAGGTCCAGAGCACAGAGCCATGTCAGACGTGCTTGTTTTATCACTGGTGTTTCAGAGAATTACCTTTGATCTCAAGCTTCCAATCCACGAGCTTGTGCAGAAGGCTTTTACTGCTGATGAATTAACAAGTAGCAGCGCGAAGAATAGAAGTGCAAAGAATAGAAGTCCGAAGAAGAAAAAAGACTCAAGCTAGCTAGTTCTGTTCTTCCTTGTTGTCATTACTACTGTATCATCCATTGTTGTTAATTTATGTGATTTAATTCTTCTAATTTTAGGTGAATCACTCATTGTAATCCCATTCTCTTGGGCATTTATAGAAATGAAAGCAAAATTTTAG

Coding sequence (CDS)

ATGAGAACAGCCCCAATGTGTTACTCGATCTTGCGAGTCCCTAGATTCAGAGTTTGCTCTTTGGTTAATGCATGGTGGGAAGGCTCTGACTCTGTACGTCCAACATGTAGAAACGTATCCAATTTTAGGGTACTAAATTCCAGTGTTGGTGGTCGTGAAAGAAATGGAAGTTGGAGTCGGAGACCCTTAACAACTGCAGGTGAAGGAATTAGCAAAAACTCCTTGAGCAGTGCAGGCAATGTCAGGCTTGACTTATCAAATAAAGTAATTGCGAATACAACCACAGACTTGAAAAAAAGCGTAACTGATGGTAGCAATGCAGATATTCGACAACTGATAGCTGAAAATAAGGATTTGGCTAGCCTTGCAACTTTTATTGTCTTTGATCTTGAGACAACTGGCCTTGACAGAAAATCTGAAAGAATTATCGAGATTGCGCTTATGGACCTCGGTGGTGATGAACACAACACTTTTAGCACTCTAGTTAATCCTGATCGTAATGTCCTAAATTCAGACATCCATAATATTAAAACCGAGATGGTCAGAAATCGTGATGTTCCAAGGATGGACCAACTTATTCCAATACTGCTACAGTATGTGAGAAGCCGTCAGAAGCCAGGGGGATATGTGGTGTTAGTCGCACATAACGCTAGAAGTTTTGACGTTCCGTTCCTGGTTAATGCATTTAAACGACATGGTTTTGAAATCCCTTCAAACTGGTTTTTTTTGGATACTCTTCCTTTAGGGCGTCAAGTACTGAAAGCCGCAGGAGTAACAACTGGGTGCCGGTTGCAAGGACTTCGTGAGCATTATGAAATCCAATTAGAAGGTCCAGAGCACAGAGCCATGTCAGACGTGCTTGTTTTATCACTGGTGTTTCAGAGAATTACCTTTGATCTCAAGCTTCCAATCCACGAGCTTGTGCAGAAGGCTTTTACTGCTGATGAATTAACAAGTAGCAGCGCGAAGAATAGAAGTGCAAAGAATAGAAGTCCGAAGAAGAAAAAAGACTCAAGCTAG

Protein sequence

MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSRRPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNADIRQLIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNWFFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDLKLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo22919	Spo22919	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo22919.1	Spo22919.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22919.1.exon.1	Spo22919.1.exon.1	exon
Spo22919.1.exon.2	Spo22919.1.exon.2	exon
Spo22919.1.exon.3	Spo22919.1.exon.3	exon
Spo22919.1.exon.4	Spo22919.1.exon.4	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22919.1.utr5p.1	Spo22919.1.utr5p.1	five_prime_UTR
Spo22919.1.utr5p.2	Spo22919.1.utr5p.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22919.1.CDS.1	Spo22919.1.CDS.1	CDS
Spo22919.1.CDS.2	Spo22919.1.CDS.2	CDS
Spo22919.1.CDS.3	Spo22919.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo22919.1.utr3p.1	Spo22919.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo22919.1 vs. NCBI nr
Match: gi|902188288|gb|KNA11098.1| (hypothetical protein SOVF_138230 [Spinacia oleracea])

HSP 1 Score: 656.4 bits (1692), Expect = 2.800e-185
Identity = 335/339 (98.82%), Postives = 336/339 (99.12%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSR 60
           MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSR
Sbjct: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSR 60

Query: 61  RPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNADIRQLIAENKDLA 120
           RPLTTAGEGISKNSLSSA NVRLDLSNK I NTTTDLKKSVTDGSNADIRQLIAENKDLA
Sbjct: 61  RPLTTAGEGISKNSLSSAANVRLDLSNKAIVNTTTDLKKSVTDGSNADIRQLIAENKDLA 120

Query: 121 SLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEM 180
           SLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEM
Sbjct: 121 SLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEM 180

Query: 181 VRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW 240
           VRNRDVPRMDQLIPILLQYV+SRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW
Sbjct: 181 VRNRDVPRMDQLIPILLQYVKSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW 240

Query: 241 FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDL 300
           FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDL
Sbjct: 241 FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDL 300

Query: 301 KLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS 340
           KLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS
Sbjct: 301 KLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS 339

[Close]

BLAST of Spo22919.1 vs. NCBI nr
Match: gi|731326698|ref|XP_010674150.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 415.2 bits (1066), Expect = 1.100e-112
Identity = 227/348 (65.23%), Postives = 274/348 (78.74%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERN-GSWS 60
           MRTAPMC+S+LRVPRF+V SLVN W++G D++ PTC+   NFR+++SS+GGRE++ GSWS
Sbjct: 1   MRTAPMCFSVLRVPRFKVHSLVNTWFQGFDAIHPTCKLGYNFRLISSSIGGREKSSGSWS 60

Query: 61  RRPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNA------DIRQLI 120
           RRPLTT  EG  K  L+SA NVR DL +KVIA T+T+L   + +GSN+      D+RQLI
Sbjct: 61  RRPLTTGVEGKGKKPLNSAANVRHDLPDKVIATTSTNL---IIEGSNSQQVQCPDVRQLI 120

Query: 121 AENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDI 180
           AENKDLASLATFIVFDLETTGL R+ ERIIEIAL D+ G +++TF TL+NP R V N+ I
Sbjct: 121 AENKDLASLATFIVFDLETTGL-RRDERIIEIALQDIHGGDNSTFHTLINPGRAVPNAFI 180

Query: 181 HNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHG 240
           H I T MV    VPRM++LIP+LLQ+V+SRQKPGGYVV VAHNARSFDVPFLVN F+R G
Sbjct: 181 HGITTSMVSRPGVPRMEELIPLLLQFVKSRQKPGGYVVFVAHNARSFDVPFLVNEFRRCG 240

Query: 241 FEIPSNWFFLDTLPLGRQVLKAAGVTTG--CRLQGLREHYEIQLEGPEHRAMSDVLVLSL 300
           +EIPSNW FLDTLPLGRQV+K+AGV TG    LQGLRE+Y I+L+G  HRAM+DV +LSL
Sbjct: 241 WEIPSNWSFLDTLPLGRQVIKSAGVKTGGKASLQGLREYYGIELKGSAHRAMADVHILSL 300

Query: 301 VFQRITFDLKLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS 340
           V QR+T DL+LP   LVQK FTA+ELTSS+A          KKKKDSS
Sbjct: 301 VLQRLTIDLELPKAGLVQKTFTANELTSSNA----------KKKKDSS 334

[Close]

BLAST of Spo22919.1 vs. NCBI nr
Match: gi|566168899|ref|XP_006382426.1| (hypothetical protein POPTR_0005s02060g [Populus trichocarpa])

HSP 1 Score: 335.9 bits (860), Expect = 8.300e-89
Identity = 189/335 (56.42%), Postives = 231/335 (68.96%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGS--W 60
           MRT  MC+SIL+VPR R  +L N WWE S S+  TC   S+FR+L S   G E   S  W
Sbjct: 4   MRTVLMCFSILQVPRCRTHTLANFWWESSRSLNRTCGRNSSFRLLGSKANGMEGGYSKRW 63

Query: 61  SRRPLTTAGEGIS----KNSLSSAGNVRLDLSNKVIANTTTDLKKS-VTD---GSNADIR 120
            RRP++T   G S    K+  ++ G+  LD    V   +T ++KK+ V+D       DI+
Sbjct: 64  IRRPVSTKTGGESQTTRKSKSTTIGHEILD--ETVSTRSTLNIKKTEVSDFHRNQYCDIQ 123

Query: 121 QLIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLN 180
           Q IAEN+D+A L T IVFD+ETTG  R++ERIIEIAL DL G E++TF TLVNP R+V N
Sbjct: 124 QKIAENEDIAKLVTVIVFDIETTGFSRQNERIIEIALQDLQGGENSTFQTLVNPGRHVTN 183

Query: 181 SDIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFK 240
           SDIH+I T MV   DVPRM++LIPILLQYV+SRQKPGGYV+ VAHNAR+FDVPFLVN F 
Sbjct: 184 SDIHHITTHMVCRPDVPRMEELIPILLQYVKSRQKPGGYVMFVAHNARNFDVPFLVNEFG 243

Query: 241 RHGFEIPSNWFFLDTLPLGRQVLKAAG--VTTGCRLQGLREHYEIQLEGPEHRAMSDVLV 300
           RH FEIP NW F+DT PL R+VLK  G  VT+G  L+ L + Y IQ  G  HRAM+DV  
Sbjct: 244 RHHFEIPQNWLFVDTRPLAREVLKMEGLKVTSGTSLEALCKKYNIQFVGKAHRAMADVTA 303

Query: 301 LSLVFQRITFDLKLPIHELVQKAFTADELTSSSAK 324
           LSLV QR+TFDLKLP+  L+ K FT  ELTS+  K
Sbjct: 304 LSLVLQRLTFDLKLPLSGLIAKHFTPSELTSAKKK 336

[Close]

BLAST of Spo22919.1 vs. NCBI nr
Match: gi|743883068|ref|XP_011036925.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Populus euphratica])

HSP 1 Score: 324.3 bits (830), Expect = 2.500e-85
Identity = 186/337 (55.19%), Postives = 229/337 (67.95%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGS--W 60
           MRT  MC+SIL+VPR R+ +L N W E S S+  TC   S+FR+L S   G E   S  W
Sbjct: 1   MRTVLMCFSILQVPRCRIHNLANFWRESSRSLNRTCGKNSSFRLLGSKANGMEGGYSKRW 60

Query: 61  SRRPLTTAGEGIS----KNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSN------AD 120
            RRPL+T   G S    K   ++ G+  LD +     +T + LK   T+ S+       D
Sbjct: 61  IRRPLSTKTGGESQTTRKGKSTTIGHEILDRT----VSTRSTLKIEKTEVSDFHRNRYCD 120

Query: 121 IRQLIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNV 180
           I+Q IAE++D+A L T IVFD+ETTG  R++ERIIEIAL DL G E++TF TLVNP R+V
Sbjct: 121 IQQKIAESEDIAKLVTVIVFDIETTGFSRQNERIIEIALQDLQGGENSTFQTLVNPGRHV 180

Query: 181 LNSDIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNA 240
            NSDIH+I T+MV   DVPRM++LIPILLQYV+SRQK GGYV+ VAHNAR+FDVPFLVN 
Sbjct: 181 TNSDIHHITTQMVCRPDVPRMEELIPILLQYVKSRQKLGGYVMFVAHNARTFDVPFLVNE 240

Query: 241 FKRHGFEIPSNWFFLDTLPLGRQVLKAAG--VTTGCRLQGLREHYEIQLEGPEHRAMSDV 300
           F RH FEIP NW F+DT PL R++LK  G  VT+G  L+ L + Y IQ  G  HRAM+DV
Sbjct: 241 FGRHHFEIPQNWLFVDTRPLAREMLKMEGLKVTSGTSLEALCKKYNIQSVGKAHRAMADV 300

Query: 301 LVLSLVFQRITFDLKLPIHELVQKAFTADELTSSSAK 324
             LSLV QR+TFDLKLP+  LV K FT  ELTS+  K
Sbjct: 301 TALSLVLQRLTFDLKLPLSGLVAKHFTPSELTSAKKK 333

[Close]

BLAST of Spo22919.1 vs. NCBI nr
Match: gi|255542840|ref|XP_002512483.1| (PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Ricinus communis])

HSP 1 Score: 311.6 bits (797), Expect = 1.700e-81
Identity = 173/332 (52.11%), Postives = 223/332 (67.17%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGS--W 60
           MR  PMC+SIL+VPR R+ ++ N W E   S    C N S+FR+L S   G E   S  W
Sbjct: 1   MRIIPMCFSILQVPRCRLHTIANFWQESFHSSARKCGNKSSFRLLASKSDGLEGGYSRRW 60

Query: 61  SRRPLTTAGEGISKNSL--SSAGNVRLDLSNKVIANTTT--DLKKSVTDGSN---ADIRQ 120
            RRP++T  EG +K +   S + N+R ++ ++ ++ + T    K  +++  N    DIR+
Sbjct: 61  IRRPVSTKTEGTNKITQYDSKSTNIRHEILDETVSTSATLSISKTEISEYQNIRYCDIRR 120

Query: 121 LIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNS 180
            I EN DLA L T IVFDLETTG  R+ ERIIEIAL DL G E++TF TL+NP R V NS
Sbjct: 121 EILENNDLAKLVTVIVFDLETTGFSREYERIIEIALQDLHGGENSTFQTLINPGRIVPNS 180

Query: 181 DIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKR 240
            IH I T MV    VPRM+ LIPILLQY+RSRQKPGGYV+LVAHN RSFDVPFL+N FKR
Sbjct: 181 HIHGITTHMVCKPHVPRMEDLIPILLQYIRSRQKPGGYVLLVAHNGRSFDVPFLINEFKR 240

Query: 241 HGFEIPSNWFFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSL 300
            G ++P NW F+DTLPL R+ +K+ G+     LQGLRE + I+LEG  HRAMSDV +L+ 
Sbjct: 241 SGVDVPCNWLFMDTLPLARKWMKSKGLKISSSLQGLREAFGIKLEGSAHRAMSDVRLLAK 300

Query: 301 VFQRITFDLKLPIHELVQKAFTADELTSSSAK 324
           +FQ +TF+LK  +  LV ++FTA EL +   K
Sbjct: 301 LFQMLTFNLKTTLPSLVAESFTASELINVKKK 332

[Close]

BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QWN4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138230 PE=4 SV=1)

HSP 1 Score: 656.4 bits (1692), Expect = 1.900e-185
Identity = 335/339 (98.82%), Postives = 336/339 (99.12%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSR 60
           MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSR
Sbjct: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSWSR 60

Query: 61  RPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNADIRQLIAENKDLA 120
           RPLTTAGEGISKNSLSSA NVRLDLSNK I NTTTDLKKSVTDGSNADIRQLIAENKDLA
Sbjct: 61  RPLTTAGEGISKNSLSSAANVRLDLSNKAIVNTTTDLKKSVTDGSNADIRQLIAENKDLA 120

Query: 121 SLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEM 180
           SLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEM
Sbjct: 121 SLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDIHNIKTEM 180

Query: 181 VRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW 240
           VRNRDVPRMDQLIPILLQYV+SRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW
Sbjct: 181 VRNRDVPRMDQLIPILLQYVKSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW 240

Query: 241 FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDL 300
           FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDL
Sbjct: 241 FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFDL 300

Query: 301 KLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS 340
           KLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS
Sbjct: 301 KLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS 339

[Close]

BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CJE1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g076570 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 7.500e-113
Identity = 227/348 (65.23%), Postives = 274/348 (78.74%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERN-GSWS 60
           MRTAPMC+S+LRVPRF+V SLVN W++G D++ PTC+   NFR+++SS+GGRE++ GSWS
Sbjct: 1   MRTAPMCFSVLRVPRFKVHSLVNTWFQGFDAIHPTCKLGYNFRLISSSIGGREKSSGSWS 60

Query: 61  RRPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNA------DIRQLI 120
           RRPLTT  EG  K  L+SA NVR DL +KVIA T+T+L   + +GSN+      D+RQLI
Sbjct: 61  RRPLTTGVEGKGKKPLNSAANVRHDLPDKVIATTSTNL---IIEGSNSQQVQCPDVRQLI 120

Query: 121 AENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNSDI 180
           AENKDLASLATFIVFDLETTGL R+ ERIIEIAL D+ G +++TF TL+NP R V N+ I
Sbjct: 121 AENKDLASLATFIVFDLETTGL-RRDERIIEIALQDIHGGDNSTFHTLINPGRAVPNAFI 180

Query: 181 HNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHG 240
           H I T MV    VPRM++LIP+LLQ+V+SRQKPGGYVV VAHNARSFDVPFLVN F+R G
Sbjct: 181 HGITTSMVSRPGVPRMEELIPLLLQFVKSRQKPGGYVVFVAHNARSFDVPFLVNEFRRCG 240

Query: 241 FEIPSNWFFLDTLPLGRQVLKAAGVTTG--CRLQGLREHYEIQLEGPEHRAMSDVLVLSL 300
           +EIPSNW FLDTLPLGRQV+K+AGV TG    LQGLRE+Y I+L+G  HRAM+DV +LSL
Sbjct: 241 WEIPSNWSFLDTLPLGRQVIKSAGVKTGGKASLQGLREYYGIELKGSAHRAMADVHILSL 300

Query: 301 VFQRITFDLKLPIHELVQKAFTADELTSSSAKNRSAKNRSPKKKKDSS 340
           V QR+T DL+LP   LVQK FTA+ELTSS+A          KKKKDSS
Sbjct: 301 VLQRLTIDLELPKAGLVQKTFTANELTSSNA----------KKKKDSS 334

[Close]

BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
Match: U5G9K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s02060g PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 5.800e-89
Identity = 189/335 (56.42%), Postives = 231/335 (68.96%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGS--W 60
           MRT  MC+SIL+VPR R  +L N WWE S S+  TC   S+FR+L S   G E   S  W
Sbjct: 4   MRTVLMCFSILQVPRCRTHTLANFWWESSRSLNRTCGRNSSFRLLGSKANGMEGGYSKRW 63

Query: 61  SRRPLTTAGEGIS----KNSLSSAGNVRLDLSNKVIANTTTDLKKS-VTD---GSNADIR 120
            RRP++T   G S    K+  ++ G+  LD    V   +T ++KK+ V+D       DI+
Sbjct: 64  IRRPVSTKTGGESQTTRKSKSTTIGHEILD--ETVSTRSTLNIKKTEVSDFHRNQYCDIQ 123

Query: 121 QLIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLN 180
           Q IAEN+D+A L T IVFD+ETTG  R++ERIIEIAL DL G E++TF TLVNP R+V N
Sbjct: 124 QKIAENEDIAKLVTVIVFDIETTGFSRQNERIIEIALQDLQGGENSTFQTLVNPGRHVTN 183

Query: 181 SDIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFK 240
           SDIH+I T MV   DVPRM++LIPILLQYV+SRQKPGGYV+ VAHNAR+FDVPFLVN F 
Sbjct: 184 SDIHHITTHMVCRPDVPRMEELIPILLQYVKSRQKPGGYVMFVAHNARNFDVPFLVNEFG 243

Query: 241 RHGFEIPSNWFFLDTLPLGRQVLKAAG--VTTGCRLQGLREHYEIQLEGPEHRAMSDVLV 300
           RH FEIP NW F+DT PL R+VLK  G  VT+G  L+ L + Y IQ  G  HRAM+DV  
Sbjct: 244 RHHFEIPQNWLFVDTRPLAREVLKMEGLKVTSGTSLEALCKKYNIQFVGKAHRAMADVTA 303

Query: 301 LSLVFQRITFDLKLPIHELVQKAFTADELTSSSAK 324
           LSLV QR+TFDLKLP+  L+ K FT  ELTS+  K
Sbjct: 304 LSLVLQRLTFDLKLPLSGLIAKHFTPSELTSAKKK 336

[Close]

BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
Match: B9RFG4_RICCO (Exonuclease, putative OS=Ricinus communis GN=RCOM_1434480 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.200e-81
Identity = 173/332 (52.11%), Postives = 223/332 (67.17%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGS--W 60
           MR  PMC+SIL+VPR R+ ++ N W E   S    C N S+FR+L S   G E   S  W
Sbjct: 1   MRIIPMCFSILQVPRCRLHTIANFWQESFHSSARKCGNKSSFRLLASKSDGLEGGYSRRW 60

Query: 61  SRRPLTTAGEGISKNSL--SSAGNVRLDLSNKVIANTTT--DLKKSVTDGSN---ADIRQ 120
            RRP++T  EG +K +   S + N+R ++ ++ ++ + T    K  +++  N    DIR+
Sbjct: 61  IRRPVSTKTEGTNKITQYDSKSTNIRHEILDETVSTSATLSISKTEISEYQNIRYCDIRR 120

Query: 121 LIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNVLNS 180
            I EN DLA L T IVFDLETTG  R+ ERIIEIAL DL G E++TF TL+NP R V NS
Sbjct: 121 EILENNDLAKLVTVIVFDLETTGFSREYERIIEIALQDLHGGENSTFQTLINPGRIVPNS 180

Query: 181 DIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKR 240
            IH I T MV    VPRM+ LIPILLQY+RSRQKPGGYV+LVAHN RSFDVPFL+N FKR
Sbjct: 181 HIHGITTHMVCKPHVPRMEDLIPILLQYIRSRQKPGGYVLLVAHNGRSFDVPFLINEFKR 240

Query: 241 HGFEIPSNWFFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSL 300
            G ++P NW F+DTLPL R+ +K+ G+     LQGLRE + I+LEG  HRAMSDV +L+ 
Sbjct: 241 SGVDVPCNWLFMDTLPLARKWMKSKGLKISSSLQGLREAFGIKLEGSAHRAMSDVRLLAK 300

Query: 301 VFQRITFDLKLPIHELVQKAFTADELTSSSAK 324
           +FQ +TF+LK  +  LV ++FTA EL +   K
Sbjct: 301 LFQMLTFNLKTTLPSLVAESFTASELINVKKK 332

[Close]

BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
Match: A0A067JTU0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23253 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.900e-80
Identity = 174/337 (51.63%), Postives = 229/337 (67.95%), Query Frame = 1


		  
Query: 1   MRTAPMCYSILRVPRFRVCSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNG---S 60
           MR  PMC+SIL+VPR R+ +L N W E   S+   C + S+FR L+ S G     G    
Sbjct: 1   MRILPMCFSILQVPRCRIHTLANFWQESFHSLHRKCGDYSSFR-LHGSYGNALEGGYSRR 60

Query: 61  WSRRPLTTAGEG---ISKNSLSSAGN-VRLDLSNKVIANTTT--DLKKSVTDGSN---AD 120
           W RRPL+T  +G   I++NS SS    +R ++ ++ I N+ T    KK V +       +
Sbjct: 61  WIRRPLSTKTKGTKKITQNSDSSKSTTIRHEILDETILNSATVNANKKEVIEFQKIQYCN 120

Query: 121 IRQLIAENKDLASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDRNV 180
           I+Q IAEN DL+ L T I+FDLETTG  R++ERIIEIAL DL G E++TF TLVNP+R +
Sbjct: 121 IQQKIAENNDLSKLVTVIIFDLETTGFSRQNERIIEIALQDLQGGENSTFHTLVNPERYI 180

Query: 181 LNSDIHNIKTEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNA 240
            NS+IH I   MV    +PRM++LIPILLQY+RSRQKPGGYV+LVAHN R+FDVPFL   
Sbjct: 181 ANSNIHKITNHMVSRPGIPRMEELIPILLQYIRSRQKPGGYVLLVAHNGRTFDVPFLTQE 240

Query: 241 FKRHGFEIPSNWFFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLV 300
           F RHGF+IPSNW FLDT+PL R+ +K+ G++   +LQ + E   I+  GP HRAMSDV +
Sbjct: 241 FNRHGFDIPSNWLFLDTMPLVREWMKSEGLSCSRKLQDIAEKLLIKKTGPAHRAMSDVEL 300

Query: 301 LSLVFQRITFDLKLPIHELVQK-AFTADELTSSSAKN 325
           LSLVFQR+TF LKL +  +V + +FTA +LT+   K+
Sbjct: 301 LSLVFQRLTFRLKLSLANIVVRWSFTALDLTNGKKKS 336

[Close]

BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
Match: DPD1_ARATH (Exonuclease DPD1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=DPD1 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 4.100e-64
Identity = 145/332 (43.67%), Postives = 201/332 (60.54%), Query Frame = 1


		  
Query: 6   MCYSILRVPRFRV-------CSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSW 65
           MC SI +V R R+       C  V+ W + S S++          V  SSV G+ R   W
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKNSSSLKL-------LDVRASSVDGKAR---W 60

Query: 66  SRRPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNADIRQLIAENKD 125
            RR ++T  +G   N+ SS       L   V      D +         +++Q +A++KD
Sbjct: 61  IRRNVSTTTQGSRSNTKSSV------LGGTVPVTRIIDEESRTKVQPFGNLQQRLAQDKD 120

Query: 126 LASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDR-NVLNSDIHNIK 185
           L+ L T IV DLETTGL RK+ERIIEIA  D+ G  ++TF TLVNP    + N+ IH I+
Sbjct: 121 LSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGIR 180

Query: 186 TEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIP 245
            +MV   +VPRM++LIPI L+YV SRQKPGGYV+LVAHN +SFD  FL+N F R  +EIP
Sbjct: 181 NDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEIP 240

Query: 246 SNWFFLDTLPLGRQVLKAAGVTT--GCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQR 305
            NW  LD+LPL R+ +K+   T      L+ L ++Y +  EG  HRA+SDVL+LS VFQ+
Sbjct: 241 HNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQK 300

Query: 306 ITFDLKLPIHELVQKAFTADELTSSSAKNRSA 328
           +T DLKL + +LV +  TA +++++ AKN+ A
Sbjct: 301 LTIDLKLSLSDLVLRCHTASDISAAMAKNKKA 316

[Close]

BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
Match: DPO3_CALS4 (DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=polC PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.400e-11
Identity = 55/172 (31.98%), Postives = 91/172 (52.91%), Query Frame = 1


		  
Query: 125 FIVFDLETTGLDRKSERIIEIALMDLGGDE-HNTFSTLVNPDRNVLN--SDIHNIKTEMV 184
           F+VFD+ETTGL   ++ IIEI  + +   +  +TF T VNP   + +  + +  I   MV
Sbjct: 388 FVVFDIETTGLSNINDEIIEIGAVKIKNKKIVDTFETFVNPQIPISSFITKLTGIDESMV 447

Query: 185 RNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNWF 244
             +D P +++++P  L++ +         VLVAHNA +FDV F+ +  K+ G  + +   
Sbjct: 448 --KDAPLIEEVLPKFLEFAKG-------AVLVAHNA-NFDVSFIKSKAKKLGLTVENT-- 507

Query: 245 FLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVF 294
            LDTL L R + +        +L  L E +E++L    HRA+ D    + +F
Sbjct: 508 VLDTLELSRHLYQD---LKNYKLDTLAEFFEVKLL-HHHRAVEDAKATAEIF 543

[Close]

BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
Match: DPO3_CLOPE (DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) GN=polC PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.500e-10
Identity = 54/164 (32.93%), Postives = 89/164 (54.27%), Query Frame = 1


		  
Query: 125 FIVFDLETTGLDRKSERIIEIALMDL-GGDEHNTFSTLVNPDRNV--LNSDIHNIKTEMV 184
           ++VFD+ETTG   K+++IIEI  + L  G+  ++FST V+P  N+    +++ +I   MV
Sbjct: 435 YVVFDIETTGFSSKNDKIIEIGAVKLKDGEIVDSFSTFVDPKVNIPYKITELTSITQNMV 494

Query: 185 RNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNWF 244
             +  P +D+++P  +++V       G  VLVAHNA +FDV F+       G  + +   
Sbjct: 495 NGQ--PTIDEVLPKFMEFV-------GNSVLVAHNA-AFDVGFIKKNLMDMGKTLKNP-- 554

Query: 245 FLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSD 286
            +DT+PL R +          +L  + +H  I LE   HRA+ D
Sbjct: 555 VMDTVPLARYLYPD---LKKVKLNLVAKHLGISLEN-HHRAVDD 582

[Close]

BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
Match: DPO3_OCEIH (DNA polymerase III PolC-type OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=polC PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.000e-10
Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 1


		  
Query: 124 TFIVFDLETTGLDRKSERIIEIALMDL-GGDEHNTFSTLVNPDRNVLNS--DIHNIKTEM 183
           TF+VFD+ETTGL    + IIE+A + + GG+  + F +  NP   +  +  D+  I  +M
Sbjct: 413 TFVVFDVETTGLSAVYDTIIELAAVKIKGGEIVDRFESFANPHHALSQTTIDLTGITDDM 472

Query: 184 VRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSNW 243
           V   D P +  ++     ++       G  +LVAHNA SFD+ FL   F+R  +E  SN 
Sbjct: 473 V--NDAPEVADVLKDFHTWM-------GNDILVAHNA-SFDMGFLNQGFQRIDYEKASN- 532

Query: 244 FFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDV---------LVLSL 303
             +DTL L R +L         RL  L +H +I+L    HRA+ D          LV  L
Sbjct: 533 PVVDTLELARFLLPE---LRNHRLNTLCKHLDIELT-QHHRAIYDAEATGYLLWKLVQRL 591

Query: 304 VFQRITFDLKLPIH 306
           V + I+  L+L  H
Sbjct: 593 VEKEISNHLELNNH 591

[Close]

BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
Match: DPO3_STAEQ (DNA polymerase III PolC-type OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=polC PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.600e-10
Identity = 55/182 (30.22%), Postives = 95/182 (52.20%), Query Frame = 1


		  
Query: 123 ATFIVFDLETTGLDRKSERIIEIALMDL-GGDEHNTFSTLVNPDRNVLNSDIH--NIKTE 182
           AT++VFD+ETTGL  + ++IIE+A + +  G+  + F    NP   +  + I+  +I  +
Sbjct: 420 ATYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDD 479

Query: 183 MVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIPSN 242
           M+   D P +++++    ++V       G  + VAHNA SFD+ F+   ++R GF  PS 
Sbjct: 480 ML--TDAPEIEEVLTEFKEWV-------GDAIFVAHNA-SFDMGFIDTGYERLGFG-PST 539

Query: 243 WFFLDTLPLGRQVLKAAGVTTGCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQRITFD 302
              +DTL L R +    G      L  L + Y ++L    HRA+ D    + +F ++   
Sbjct: 540 NGVIDTLELSRTINTEYGKH---GLNFLAKKYGVELT-QHHRAIYDTEATAYIFIKMVQQ 586

[Close]

BLAST of Spo22919.1 vs. TAIR (Arabidopsis)
Match: AT5G26940.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 246.5 bits (628), Expect = 2.300e-65
Identity = 145/332 (43.67%), Postives = 201/332 (60.54%), Query Frame = 1


		  
Query: 6   MCYSILRVPRFRV-------CSLVNAWWEGSDSVRPTCRNVSNFRVLNSSVGGRERNGSW 65
           MC SI +V R R+       C  V+ W + S S++          V  SSV G+ R   W
Sbjct: 1   MCISISQVSRLRIHSFGSSCCERVHGWIKNSSSLKL-------LDVRASSVDGKAR---W 60

Query: 66  SRRPLTTAGEGISKNSLSSAGNVRLDLSNKVIANTTTDLKKSVTDGSNADIRQLIAENKD 125
            RR ++T  +G   N+ SS       L   V      D +         +++Q +A++KD
Sbjct: 61  IRRNVSTTTQGSRSNTKSSV------LGGTVPVTRIIDEESRTKVQPFGNLQQRLAQDKD 120

Query: 126 LASLATFIVFDLETTGLDRKSERIIEIALMDLGGDEHNTFSTLVNPDR-NVLNSDIHNIK 185
           L+ L T IV DLETTGL RK+ERIIEIA  D+ G  ++TF TLVNP    + N+ IH I+
Sbjct: 121 LSKLLTVIVSDLETTGLHRKNERIIEIAAQDIAGGGYSTFQTLVNPGVVPITNAHIHGIR 180

Query: 186 TEMVRNRDVPRMDQLIPILLQYVRSRQKPGGYVVLVAHNARSFDVPFLVNAFKRHGFEIP 245
            +MV   +VPRM++LIPI L+YV SRQKPGGYV+LVAHN +SFD  FL+N F R  +EIP
Sbjct: 181 NDMVCRPEVPRMEELIPIFLRYVESRQKPGGYVMLVAHNGKSFDFQFLINEFNRCSYEIP 240

Query: 246 SNWFFLDTLPLGRQVLKAAGVTT--GCRLQGLREHYEIQLEGPEHRAMSDVLVLSLVFQR 305
            NW  LD+LPL R+ +K+   T      L+ L ++Y +  EG  HRA+SDVL+LS VFQ+
Sbjct: 241 HNWLLLDSLPLARENMKSVEPTVKLSSSLEALADYYSLTREGDAHRALSDVLLLSKVFQK 300

Query: 306 ITFDLKLPIHELVQKAFTADELTSSSAKNRSA 328
           +T DLKL + +LV +  TA +++++ AKN+ A
Sbjct: 301 LTIDLKLSLSDLVLRCHTASDISAAMAKNKKA 316

The following BLAST results are available for this feature:

BLAST of Spo22919.1 vs. NCBI nr
BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
BLAST of Spo22919.1 vs. TAIR (Arabidopsis)

BLAST of Spo22919.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902188288\|gb\|KNA11098.1\|	2.8e-185	98.8	hypothetical protein SOVF_1382...	[more]
gi\|731326698\|ref\|XP_010674150.1\|	1.1e-112	65.2	PREDICTED: exonuclease DPD1, c...	[more]
gi\|566168899\|ref\|XP_006382426.1\|	8.3e-89	56.4	hypothetical protein POPTR_000...	[more]
gi\|743883068\|ref\|XP_011036925.1\|	2.5e-85	55.1	PREDICTED: exonuclease DPD1, c...	[more]
gi\|255542840\|ref\|XP_002512483.1\|	1.7e-81	52.1	PREDICTED: exonuclease DPD1, c...	[more]

BLAST of Spo22919.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QWN4_SPIOL	1.9e-185	98.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8CJE1_BETVU	7.5e-113	65.2	Uncharacterized protein OS=Bet...	[more]
U5G9K5_POPTR	5.8e-89	56.4	Uncharacterized protein OS=Pop...	[more]
B9RFG4_RICCO	1.2e-81	52.1	Exonuclease, putative OS=Ricin...	[more]
A0A067JTU0_JATCU	4.9e-80	51.6	Uncharacterized protein OS=Jat...	[more]

BLAST of Spo22919.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
DPD1_ARATH	4.1e-64	43.6	Exonuclease DPD1, chloroplasti...	[more]
DPO3_CALS4	1.4e-11	31.9	DNA polymerase III PolC-type O...	[more]
DPO3_CLOPE	1.5e-10	32.9	DNA polymerase III PolC-type O...	[more]
DPO3_OCEIH	2.0e-10	34.0	DNA polymerase III PolC-type O...	[more]
DPO3_STAEQ	2.6e-10	30.2	DNA polymerase III PolC-type O...	[more]

BLAST of Spo22919.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G26940.1	2.3e-65	43.6	Polynucleotidyl transferase, r...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	3.30.420.10		coord: 123..299 score: 1.0
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 122..299 score: 1.48
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 126..289 score: 4.2
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 124..302 score: 3.8
None	No IPR available	PANTHER	PTHR13058	THREE PRIME REPAIR EXONUCLEASE 1, 2	coord: 52..313 score: 2.8
None	No IPR available	PANTHER	PTHR13058:SF19	PROTEIN W02F12.4, ISOFORM D	coord: 52..313 score: 2.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0016740	transferase activity