Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCCGTTTCCCCTTCTCCTTCTTGACGAAGGAAAATATCAAAAGGGATAATTTATTAAATAACGTAAATATTTCTAATGGTATAAATAAAGTCCCTCCAATTTCTGCACAACGAAATAGTAAAACTCTTCGGCTTTCTCTCTGCTTTCCCAAACCTTCAAAATCTAAGTAGAACATGCATAATTAGGAAATTTTTTTTCTTGATTTTTTTGTAAATAATTTTTTTTGTTTTTGGTTTTTTTGATAGAAAAATCTAGTAAAATTAGGTGGGTATAAATTACGGTTCAATCAATTCTGAAATGGAGCTGGAAGATGAATTGAATCAAATCGATTGGGATAATATGTTTGTTGATATTCCGTTTCTAGAAGACGACTTTCGAATCTTCGAAGACGTTTCTCCATCTCTGGAAGTTGTTGAAGATGAAGTAGCAACAACAACTAAAATCGCGAGTGGGCCCACCGTTGAGTCGTGGATTGAGGAGTTGTTGATGAAGGACGACGATGACGAACATAATAACAGTAATCAAGCAGCAGTAGAAGTATTGGGCGATGATTTCTTGTGGTCTGATCTACTGGTTGATTCGCATCAAGAGGATTGTCTTCCGTCCGATGATCACCGAGACTCATCATACGCTTCTCCTTCTCCAACTACACCTCCTTTTGAGGATAAGAATTCGTCTACTTGCTCCAATTCCGAGGGTAATGCTGTTCAAATTGCAACTACTAGTGATAATTATGATATTAGTGGTAAAGAAATCCCCAATTTTGAGTCGAATGGTGAAAATTGTAAGTCTGGGGATGATGCTTTGGACCTTGATGACTCTGATCGTGATCCTCTCTCGAAGAAACGTAAAAGGTAAGCCTCTAATAATACTTTTTAAAATTATTATTTTGTTGTTTTTGCTAAGGATTCATAATTACACGAATTTTATTATTATTCTGTTTGTAGAAATTATAAGTGAAGTTGTTGTTTTTGCTAATGATTCATAATTTATACCTTCGAATTACTCTTTTTTATTCATAAACAACGATTGATTTGAGTTTTGTTTTTTATTAGTGAATTTTTTGTTGTTCCTAACTCGTAGTTTATACCATCCGTTATAAGCAGTATCTAATTACGGAGTACTTATCTTATTACGGAGTAGTAAATAATTATTGATTTGAATTGTGTATTCCATATGTTTGGTTGTAATCTTGAAGTTGGAAATTTAATATAGAAATCCCTGGAAAGATGAGAAAATTAGTTGACTGGATACTTATTTAGTTATTTGATACTTGCCTTCTGAATTGTAAGTCACGTTGGTTTGTAGTTTAGAGCTGTCAAAAACTGACCCGACCTGAAAACCCGACTTGAACCGACCGAACCCGTAACCGACCATGACCCGAGCTTACGGTAAATCAGCTAACCCGAAACCCGACCTGTACCCGACCCGAAAAAACCGATAACCGATTTTAACCCGATGTTGTAACACCCGAACCCGACCCGAAAATGACCGATAACCGAACTTACCCGACCGAACAATGACCCGAACCCGATTCGATACCCGACCCGATGTCAACCCGAAACCGATTGTAACTCGATGAAACCTGCTATTGACCCGACCTGTGACAACCCGCTACCCGATTTACCCGAGTTATCAATGACACGACCAAATATTAACTTCAACGATAAATCTATTTTAATTTTTATTGCTAGATACTGAAAAATTTAACTCTAAAATAAGTTAAACAAAAATTTTTAGAATATAAAATAATTAAAATGTATAGGTTAATTATCAGACCCGAGTTTGACCCGTCCCTGAGAGTGATCCGACCTGAATACTATTTGATCTGATTATTATCCGATTCAAACTAAGACCCGAACCCGAAAATAAATGTGTTGCAAACCGACTTAAACCCGCCTCGATAAGACCCGAACCCGAAATTACCTGCTACAAACCGGCTTAAACCAGACTCGATAAGACCCGAACCCGAAATCAAACCTGACCGAAATGTGACCCGACCCGAACCCGACCTGAACCCGGGATAGGGAAAAACCCGACATGACCCGACCTGAAATCGACCCGACCGAACCCAAACTCAACCCGGATGGAATATTCACCCAACACAACCCGACCTGATCATGACCCGAGATCCGAGATGACCCGACCCAAACCCGACCCGATGACCTGTTTTGACAGCTCTAATGTTGTTATAAATAGTAATGTGACAATTAAATTCGGATGTAGTTTGAAGGTGGTTGGAGTCGTGTTCTCGTGTATTTGTAGTTAGAAGAATCACAGTAATTTTTGAGTAGGCATTGGCAATTTGGCATGTGTTGTATTAGAGTTAGTAGAATTTTTTCATGTTGTGTGTATGTGTGTAGTTGTTCAGTCTGTGTTATGTATAACCGTTGCTTGGCTTTTTAAAACGAAGATTGTATAACCGTTGCTTGGCTTTTTAAAACGAAGATTGTATAATAATGTGAAATGATTGTTGATCAGACAATTGAGAAATAGAGATGCAGCACTGCGATCTAGAGAAAGGAAAAAGATGTATGTGAAGGATCTGGAGATGAAGAGTAAATACATGGAAGCGGAATGTAGGAGATTAGGGAGGTTGCTTCAGTGTTGTTATGCTGAGAATCAGATGCTGCGTATTTCCCTGGGCAGTGCGTATGGTGCTTCCTTAACCAAGCCGGAGTCTGCCGTGCTCTTGTTGGGTATGAATTTCTTATATGTCTTATTCTTTGTTTATTATTTATCCTTCCAGCTCCTGTTCCTGCAATTTGCTCCTCTTCTTGATTTTAAACATAGCAGTTGATAGTAATGCCGTGATTCGAAAGTGTTACTTCATTGTATTATGTGTTTTCACCTTCGTGAACTTCCTTGATGTACTAATTGGGAAAGTTGGAATTCAGGTAACCTACATGTTCATTGTATTATGTGTTTCCACCTTTGTGAACTTCCTTGATGTTCTAATTGGGAAAGTTGAAATTCAGTTAACCTACATCCCTTTAGAGGGGTTGGCTGCATATTATGAGTTGACTCTCCTTTCTTCTATTGCCTACCTGCCTTTAAGGGGCTGGGCTGCATATTTTGCTTCTATGTTTAGGAGAAAGTCACATTTGTAGCATGTATTGTATGTATGTTAGTCTCTTAGATAACAAACAAAACACATGTTTAAATGTTTAATATCTTGTCTTTCACCTTGGAAAATAAGGGACCATCTTTAACTTCCTCCTGAACTTGACATGTTGCCAAATTATTAAGATCTATGAGTAAATATCATTTTAAGTTTTTAAGACAGGAGACATTATATACTTCAATGTTAAATCAAGATTGAAATCTCTCTCCCTTTTCTATGTGGACGTTATATATATCATCAATGACATGTTTTCAGCATTTTGGTAGATAGAGTTTTAGGACTCATTGTTGGTCATCATAATAAATTGATAGACGTATTTTGTCATAAGTCACCACGTACTATTTTCTCCCATTTTCTCTCGAAGCTGCTTGGTTAGTGATCTTCCACATTATCGAAAAATACTCTGTTTTTGCTCGAGATTGTCATTTCTTCTTCCTTGCTCATCCTGTTTTTATTGCATCCTTTTCACAGTTGTATGACCTTAATGGAAGACATTGAAAAATTCACACACTTGCATTTGATTCTTCTTCTATTTGAAAACTGATCTTCTTTTGCAGCGTGGATCGTTCATAGTGTTTGTATTTGCTTGAGCATGGTTCATAGTTCATATCATCAGACTTAGTAGTAGTAGTAGTTTCTTAATTTATGGTCTAATTCTGTCATTCCTCACATATGTTAATATGTATGGTGGTGGTTGTACAGAATCCCTGCTGTTGGTTTCCCTGGTTTGGTTAATGGTCAACATATGCCTGCTACCTCTACACAAACTGTCCCCCCAAAATCAGGGTGCAGTTCCACACGGAAGCGTGGAGAGAAAAGAACAGGAAAGCGCAGCAGCACCAAAAGGAAAGGTAACGAAGGTCACTGAACTGTGGGTGACCCTTTGTTTCATGAGGAGTAAGAGATGCAGAGCTTCAAGGACCAAGATGAAGTCTGATATGAACGCGCTGTGTCATGCATCAACTGAAACTCCTCTCTGTTGCTTCCAGTTTTCATGGTATCGCTGATGAATATTGGTTTCTCAGCTTTTACTTTTGCATAGAAGGTACAGAGAGAGGTGATGTAGGGGTTTCCCCCAGAGTATTTTGTATCAGTAACATCTCATGTTGGTTTATATCAGTATTTTATATTTCTGTTATTTTACTTACATTACTTTCACTTTCCCCCTCTTCCTTGTTTATTCTTTTAACTTCCCGTTCCTGTCTTGTTTGATTGGTCACATTGACAATTTCCTATGTCGATTCATGTTAGCCGACCCCAAATCATTTTGGGCCTAATGAGTGTGAATTTTACAAATTATACAGTTTGAATTTTACAATGGTAGGGATTATTTTATGATGCTTTCATCTTCT TCCCCGTTTCCCCTTCTCCTTCTTGACGAAGGAAAATATCAAAAGGGATAATTTATTAAATAACGTAAATATTTCTAATGGTATAAATAAAGTCCCTCCAATTTCTGCACAACGAAATAGTAAAACTCTTCGGCTTTCTCTCTGCTTTCCCAAACCTTCAAAATCTAAGTAGAACATGCATAATTAGGAAATTTTTTTTCTTGATTTTTTTGTAAATAATTTTTTTTGTTTTTGGTTTTTTTGATAGAAAAATCTAGTAAAATTAGGTGGGTATAAATTACGGTTCAATCAATTCTGAAATGGAGCTGGAAGATGAATTGAATCAAATCGATTGGGATAATATGTTTGTTGATATTCCGTTTCTAGAAGACGACTTTCGAATCTTCGAAGACGTTTCTCCATCTCTGGAAGTTGTTGAAGATGAAGTAGCAACAACAACTAAAATCGCGAGTGGGCCCACCGTTGAGTCGTGGATTGAGGAGTTGTTGATGAAGGACGACGATGACGAACATAATAACAGTAATCAAGCAGCAGTAGAAGTATTGGGCGATGATTTCTTGTGGTCTGATCTACTGGTTGATTCGCATCAAGAGGATTGTCTTCCGTCCGATGATCACCGAGACTCATCATACGCTTCTCCTTCTCCAACTACACCTCCTTTTGAGGATAAGAATTCGTCTACTTGCTCCAATTCCGAGGGTAATGCTGTTCAAATTGCAACTACTAGTGATAATTATGATATTAGTGGTAAAGAAATCCCCAATTTTGAGTCGAATGGTGAAAATTGTAAGTCTGGGGATGATGCTTTGGACCTTGATGACTCTGATCGTGATCCTCTCTCGAAGAAACGTAAAAGACAATTGAGAAATAGAGATGCAGCACTGCGATCTAGAGAAAGGAAAAAGATGTATGTGAAGGATCTGGAGATGAAGAGTAAATACATGGAAGCGGAATGTAGGAGATTAGGGAGGTTGCTTCAGTGTTGTTATGCTGAGAATCAGATGCTGCGTATTTCCCTGGGCAGTGCGTATGGTGCTTCCTTAACCAAGCCGGAGTCTGCCGTGCTCTTGTTGGAATCCCTGCTGTTGGTTTCCCTGGTTTGGTTAATGGTCAACATATGCCTGCTACCTCTACACAAACTGTCCCCCCAAAATCAGGGTGCAGTTCCACACGGAAGCGTGGAGAGAAAAGAACAGGAAAGCGCAGCAGCACCAAAAGGAAAGGTAACGAAGGTCACTGAACTGTGGGTGACCCTTTGTTTCATGAGGAGTAAGAGATGCAGAGCTTCAAGGACCAAGATGAAGTCTGATATGAACGCGCTGTGTCATGCATCAACTGAAACTCCTCTCTGTTGCTTCCAGTTTTCATGGTATCGCTGATGAATATTGGTTTCTCAGCTTTTACTTTTGCATAGAAGGTACAGAGAGAGGTGATGTAGGGGTTTCCCCCAGAGTATTTTGTATCAGTAACATCTCATGTTGGTTTATATCAGTATTTTATATTTCTGTTATTTTACTTACATTACTTTCACTTTCCCCCTCTTCCTTGTTTATTCTTTTAACTTCCCGTTCCTGTCTTGTTTGATTGGTCACATTGACAATTTCCTATGTCGATTCATGTTAGCCGACCCCAAATCATTTTGGGCCTAATGAGTGTGAATTTTACAAATTATACAGTTTGAATTTTACAATGGTAGGGATTATTTTATGATGCTTTCATCTTCT ATGGAGCTGGAAGATGAATTGAATCAAATCGATTGGGATAATATGTTTGTTGATATTCCGTTTCTAGAAGACGACTTTCGAATCTTCGAAGACGTTTCTCCATCTCTGGAAGTTGTTGAAGATGAAGTAGCAACAACAACTAAAATCGCGAGTGGGCCCACCGTTGAGTCGTGGATTGAGGAGTTGTTGATGAAGGACGACGATGACGAACATAATAACAGTAATCAAGCAGCAGTAGAAGTATTGGGCGATGATTTCTTGTGGTCTGATCTACTGGTTGATTCGCATCAAGAGGATTGTCTTCCGTCCGATGATCACCGAGACTCATCATACGCTTCTCCTTCTCCAACTACACCTCCTTTTGAGGATAAGAATTCGTCTACTTGCTCCAATTCCGAGGGTAATGCTGTTCAAATTGCAACTACTAGTGATAATTATGATATTAGTGGTAAAGAAATCCCCAATTTTGAGTCGAATGGTGAAAATTGTAAGTCTGGGGATGATGCTTTGGACCTTGATGACTCTGATCGTGATCCTCTCTCGAAGAAACGTAAAAGACAATTGAGAAATAGAGATGCAGCACTGCGATCTAGAGAAAGGAAAAAGATGTATGTGAAGGATCTGGAGATGAAGAGTAAATACATGGAAGCGGAATGTAGGAGATTAGGGAGGTTGCTTCAGTGTTGTTATGCTGAGAATCAGATGCTGCGTATTTCCCTGGGCAGTGCGTATGGTGCTTCCTTAACCAAGCCGGAGTCTGCCGTGCTCTTGTTGGAATCCCTGCTGTTGGTTTCCCTGGTTTGGTTAATGGTCAACATATGCCTGCTACCTCTACACAAACTGTCCCCCCAAAATCAGGGTGCAGTTCCACACGGAAGCGTGGAGAGAAAAGAACAGGAAAGCGCAGCAGCACCAAAAGGAAAGGTAACGAAGGTCACTGAACTGTGGGTGACCCTTTGTTTCATGAGGAGTAAGAGATGCAGAGCTTCAAGGACCAAGATGAAGTCTGATATGAACGCGCTGTGTCATGCATCAACTGAAACTCCTCTCTGTTGCTTCCAGTTTTCATGGTATCGCTGA MELEDELNQIDWDNMFVDIPFLEDDFRIFEDVSPSLEVVEDEVATTTKIASGPTVESWIEELLMKDDDDEHNNSNQAAVEVLGDDFLWSDLLVDSHQEDCLPSDDHRDSSYASPSPTTPPFEDKNSSTCSNSEGNAVQIATTSDNYDISGKEIPNFESNGENCKSGDDALDLDDSDRDPLSKKRKRQLRNRDAALRSRERKKMYVKDLEMKSKYMEAECRRLGRLLQCCYAENQMLRISLGSAYGASLTKPESAVLLLESLLLVSLVWLMVNICLLPLHKLSPQNQGAVPHGSVERKEQESAAAPKGKVTKVTELWVTLCFMRSKRCRASRTKMKSDMNALCHASTETPLCCFQFSWYR Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo23057.1 vs. NCBI nr
Match: gi|902156967|gb|KNA06067.1| (hypothetical protein SOVF_184540 [Spinacia oleracea]) HSP 1 Score: 699.1 bits (1803), Expect = 3.900e-198 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 1
BLAST of Spo23057.1 vs. NCBI nr
Match: gi|731314241|ref|XP_010684737.1| (PREDICTED: bZIP transcription factor 60 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 340.5 bits (872), Expect = 3.600e-90 Identity = 214/332 (64.46%), Postives = 244/332 (73.49%), Query Frame = 1
BLAST of Spo23057.1 vs. NCBI nr
Match: gi|397746447|gb|AFO63291.1| (bZIP12 [Tamarix hispida]) HSP 1 Score: 199.9 bits (507), Expect = 7.500e-48 Identity = 151/356 (42.42%), Postives = 207/356 (58.15%), Query Frame = 1
BLAST of Spo23057.1 vs. NCBI nr
Match: gi|297745615|emb|CBI40780.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 171.8 bits (434), Expect = 2.200e-39 Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 1
BLAST of Spo23057.1 vs. NCBI nr
Match: gi|595847476|ref|XP_007209330.1| (hypothetical protein PRUPE_ppa008311mg [Prunus persica]) HSP 1 Score: 161.8 bits (408), Expect = 2.300e-36 Identity = 131/348 (37.64%), Postives = 179/348 (51.44%), Query Frame = 1
BLAST of Spo23057.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFM6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184540 PE=4 SV=1) HSP 1 Score: 699.1 bits (1803), Expect = 2.800e-198 Identity = 359/359 (100.00%), Postives = 359/359 (100.00%), Query Frame = 1
BLAST of Spo23057.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D5B4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g013750 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 2.500e-90 Identity = 214/332 (64.46%), Postives = 244/332 (73.49%), Query Frame = 1
BLAST of Spo23057.1 vs. UniProtKB/TrEMBL
Match: I7D4B0_9CARY (BZIP12 OS=Tamarix hispida PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.200e-48 Identity = 151/356 (42.42%), Postives = 207/356 (58.15%), Query Frame = 1
BLAST of Spo23057.1 vs. UniProtKB/TrEMBL
Match: F6I6W6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00500 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.700e-46 Identity = 153/337 (45.40%), Postives = 202/337 (59.94%), Query Frame = 1
BLAST of Spo23057.1 vs. UniProtKB/TrEMBL
Match: M5W9Y4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008311mg PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.600e-36 Identity = 131/348 (37.64%), Postives = 179/348 (51.44%), Query Frame = 1
BLAST of Spo23057.1 vs. ExPASy Swiss-Prot
Match: BZP60_ARATH (bZIP transcription factor 60 OS=Arabidopsis thaliana GN=BZIP60 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.800e-24 Identity = 124/329 (37.69%), Postives = 164/329 (49.85%), Query Frame = 1
BLAST of Spo23057.1 vs. TAIR (Arabidopsis)
Match: AT1G42990.1 (basic region/leucine zipper motif 60) HSP 1 Score: 113.2 bits (282), Expect = 3.300e-25 Identity = 124/329 (37.69%), Postives = 164/329 (49.85%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23057.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23057.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23057.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo23057.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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