Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAATGATTTCTCTATAATTAAAAGCGGTCCCTTTTGTCATCTTCCTTTTCCAGATGTACACTTTCTTCCTTCTCGCAATCTCTAACAACATAGACACAGTTTAATTAGTGATTCTTGGATTTCCTTTGTTCTTTTTAGGTTAGTGGGTCATAATCTTACCTTTTCGATCCTAATCATTCACTAATTATCGTTCTTTTTCCAAGGTTCTACAGTATCAACTCTTTCTATGTAAGTTCATCCATTTCTTGATAGTATGTTCTTTCTTTTCATACTTTATTGGTTTATTTACTGATTTATTTATATGGGGTAATAATATTTAGAATTTGTGGGTTATTTTGGTACCAACGCATTGTCATATTTACCTATTTATAGCTATGAATAATAATGAAGAATTTAAGATCAAAGGATCTAAATAATTTGTATTTTTTTTCCAAGTTAAGAAATTTGGAATCTGAAATCCCTTTCCAAACCCACCAAGTTTGACTTTTAGTTGTATCATCCACTTTTGACTTGTAATTTTGCAAAAAGAGGAAATTTTATTGATTGAAGATGGTATGAAGGTTCTTGAAACTGTGTTTTTTTGGGTCTTTATCAATTTTTTCCAAGAACTTTATGTTTAAAAGGGTTGTGGAATATGATTCTGAAAAGATAGAAAAACTTGACATAAATGGTCTGTTCTTTCTAGGTTGGCAAGTGTCATAGAAGGAGTTGATGAAAGAATTGGGTGAAAATTTCTGCTAGTTGAAGAAGATGGGGTCATTTAAAGGTCATGTAGTTCCAGGAACACTGTTTTTGCTGGTGGGTTTATGGCATATGTGGTGCAGTGTGTACAGATATGTGAGAAGTCCGAATACATTCCGGATCCGGGTATGGAATCCGGTGCCGGGTTTTGATGGGAGGATCAAGTACTTGGAATTGTATGTGGTTGTGATTGGTTCTTTTATTGATTTGTGCATAGAACTTGTGTATTCACCTCATCTCAAGTACTTTGTAAATGGGGTTTTGAATCCTTCTCATATGAATAATTTTGAGCACTCTGGGATGCTTATCATGTTCTTCATCTTCGGCCTCGTCGGTCTTTTATCAGTAAAGACAAGGTCTGTTTCTCTTTCTTTCTTGCCTTTTGAATCAAATATTGCATCCTGTAATTGTTTTATATTTTCAGAAAAAAATAGTGGGAATTGGGAATTATATAATCTATTTGTTGGGGTTGATTATGGCATGTCAAAATCTTAAAACTAGTTTACTTTATGTGTAGTGCCCTTAAAATATTTTTGGAGCTTTATTTTCTTTATTTTACAACTTTTTCTAGCATCAAATGAAATTGTTTTGGTAGGGACAATCACGATAGTTTTTGAATTAAAACTTAATTTAGTAGTTGTTGAACATCATAGCTCTATAAAGTGTCATTGTAGTTTTTCTGCTTGATTTCTCTGATGTCAAAAAAAGAAGTCTTTCCTCATTTCCCCCCCCAAAAGGTTGAAACAACAGTAGCATTTATTGATCAGTTGATGTTAGTTTTGCCACTTCTTACTTTTTGAGTTGAGTAGTAATTTGGTGAATTTTATTTCTTTACTAATCTGTACTCTGTAGTAAGTGCTAAGCCACATGCGCAAGAAGGAAAGGCGGTATATAGACCAGGTTTAGCCTTGGTAAACGGTTTGCTTCATAATTCTAAGTTTGCTGGTTCTTGATAGTGTTCACTTAACAGCCTGTTAGTGAAATACTTAAATCTGCTTGAGAGGCTATAATGGAAATAATGACAAAATCAACCTCTTGAAATGGTTTATGTTTGTCAACACTATAAGTATTTCTTTTAATAAAGGTGCTTAAAAGGAAGAAAGTTATACGGTTTGAATGTTTTTTTTAGTTAGAAAGTTCATGTTAGGTTATTAGAGACTGAACGACCGTAATATATCTGAATCTGAAGTGCATTACTTCGTCAGACTCCCACTTTAGATGGATCCCTTTTATGTTGGAAGCTCTGAGCTTCTTTTTTTCTGATAAGTTGACAAAATTCTAAGTAAATGTTACTCGTACTAAAGAGGAAAGTGAAATTTAGAATAGGACATCCCAAAATAGGATTCAAAATATTCAAGATATTTGAAGGATTGTCTGCAGTGTCATGGTTTATGCATATTGTTTCATAGTAGTATGAAATATTATGTTTTCGTCTTAGCCAATCAAACTCTAGCTTATGTCTTCTTACTGGGTATCCTTAAACTTGAAGGTAGTACTTCTTTTTTGAAAGAGAAGTTAATACTTCTGTTGCTTCAGTTATTCAATATTCTGATGGAATTCAGCAAAAAGAAGGGAAAGCAATTTGTGTCAACAGAGGATAGTTTTCATGTCTTGACTCATGACTCATGAGTAGCAACCTGAGTTACAAGCTACAATGACTAGTTCGCCTTTGTACTACTTTTGAACTGGTGTATATGATCTGTTTATTAGCCGTAGCCGTAGCCATAGCCATAGCCATAGAGAACATTCTCATGCTCATTTTTTAACTATTGGCTGGAACTTTGGGCTTCGTTTTCTGGATCACAGTGTTCTACTTGCGGAAATAAGATGTTAACTTAGGGTGCGTTCTATTCACCCGATTTTCACATATTTTTTCTGAACTTATTAGAACTTATCAAAATTTATTTTAGTTATAAGTTGGACTTAAGTATCCCTTATTTTTCCTGAATTTATCTTATCTGATTTTTTCTAAACTTAATTGAACTTATTTTCCCCGAAATAAGTGTAAATAAGATGAACAGAACAGAGCCTTTAACCAATAAATGAGACAAAGGAAGTAATAAATGAGAAAAATGCTCACAACTATCTGAATAATACATTACCTCTGAATTACTAATTCTAGTTGAACATCTGACAGTCTCAGTGACACTTATTTCTGAAAATATAGCTAACCACGTAATGTTTTCCGTTCTTCAGCATTCTTCCCTTACCAGACGGAGCACTTACTTTGATCGGTGCAACAGCGTTCTCATCAGAGTACCTACTGTTTTACTTCCACTCAACAAATCACAAAGGCCTAGAAGGCTACTATCACTACATCCTAGTTCTCCTGATAGGCTTGTGTGTTCTAACTAGCGTTGTTGGCACACTTGTACCATCAAATTTCCCGCTTGATTTATCAAATAGTATTGCCATAACTCTACAAGGCCTTTGGTTTTACCAGACTGCGTTCACACTTTACGGCCCCATGATGCCACACGGGTGCCAACTTAAAGGAGATGACATTGTTTGTCATTCAGCTGATAGTCAAATAAGAGGAGAGTTGCTTGCAAATTTCCAGCTATTTTCAATGGTTGTTGGTGTTTTTGCTGTAATCTCTGTATTTTACAGTTTTGCCACTTCGAGATTTGGCCATTCTAGTCAGGAGAGGTTGCAGGAAGCTGATGGTGATTTGTAGATATTAAAGTAGGTAATGCCATTTTCCCTTCTACACTCCTTGTTGATTTTGTCTTTCTGTAGGCAGTTACAGATGCATTAGAAGATTTTGCTGGTTTTGACTGCTCTTTTTTTTTCCGTCTTTCCTGAAAGTTTAATACTACAAGCAATTTTTGTTGGATATTATTATACACGAAGTACGTAATAACATTAGCGTTATGAGTTTATTTCAGGTAAAATTACAGTAAAATTACAACCTATGTAAGGGAGCGTTCTATTCATCTGATTTTACTTATTTTTCTCGAACTTATCTTATCTGAACTTATCTGAACATAACTGAATTTATATGAACTTATTAGTACTTAACAAAACTTATTTTATTTATAAATTGTACTTTGCCAACCCTTATTTTTCTTGAACTTATTTGAACTTATTTTTCCTGAAATCAGTGGAAATGAGGTGAACAAAACAGAGCCTAGTTGTCACTTTGATTAATAATTTAAGTCACTAGCGTGACAACTAAATCCGAACTGAGATACTAACTCATTATTTAACATTTTCATTCATTGTATCTTATAAGAAGTATATGTTTCTTGTGATGCAGCAGAGATATTCGTAAAAAGTTGAAGGCAGGAATTATGGCAAGGGTAGTGTTGAGTTAACCGAGACCTTGAAAACACGAGGTGACCATCTGTGGAGTTGGATTTTCTTATTGTGCAGCATTCCATTGATTTATATACATGTAATGCTCTTTTGATCCTTAAGAGTTGCTTAGGGGGTCATTTGAGTGCTACCTTTTTTTAGGGTTAGCAATGACATCTTATTTTTGTGTTCCACATGTTTTACTACAAGTCTGTTGATATGTTAAGAATTCTTCTTTTTTGTTTGTTTTTGGGGCTACAAATGTAAGTTACTACTGACTAACGCGTATTGTAATCGCACTTTGTTTACCCTAATTATTTACAAGTACCTTCGTGAGAATAAAAGGTCTTGCATGCACTAGGTGTATAATAAAGTTATTGAACAAATGAACACAGGGTAATTTTT GTAAATGATTTCTCTATAATTAAAAGCGGTCCCTTTTGTCATCTTCCTTTTCCAGATGTACACTTTCTTCCTTCTCGCAATCTCTAACAACATAGACACAGTTTAATTAGTGATTCTTGGATTTCCTTTGTTCTTTTTAGGTTAGTGGGTCATAATCTTACCTTTTCGATCCTAATCATTCACTAATTATCGTTCTTTTTCCAAGGTTCTACAGTATCAACTCTTTCTATGTTGGCAAGTGTCATAGAAGGAGTTGATGAAAGAATTGGGTGAAAATTTCTGCTAGTTGAAGAAGATGGGGTCATTTAAAGGTCATGTAGTTCCAGGAACACTGTTTTTGCTGGTGGGTTTATGGCATATGTGGTGCAGTGTGTACAGATATGTGAGAAGTCCGAATACATTCCGGATCCGGGTATGGAATCCGGTGCCGGGTTTTGATGGGAGGATCAAGTACTTGGAATTGTATGTGGTTGTGATTGGTTCTTTTATTGATTTGTGCATAGAACTTGTGTATTCACCTCATCTCAAGTACTTTGTAAATGGGGTTTTGAATCCTTCTCATATGAATAATTTTGAGCACTCTGGGATGCTTATCATGTTCTTCATCTTCGGCCTCGTCGGTCTTTTATCAGTAAAGACAAGCATTCTTCCCTTACCAGACGGAGCACTTACTTTGATCGGTGCAACAGCGTTCTCATCAGAGTACCTACTGTTTTACTTCCACTCAACAAATCACAAAGGCCTAGAAGGCTACTATCACTACATCCTAGTTCTCCTGATAGGCTTGTGTGTTCTAACTAGCGTTGTTGGCACACTTGTACCATCAAATTTCCCGCTTGATTTATCAAATAGTATTGCCATAACTCTACAAGGCCTTTGGTTTTACCAGACTGCGTTCACACTTTACGGCCCCATGATGCCACACGGGTGCCAACTTAAAGGAGATGACATTGTTTGTCATTCAGCTGATAGTCAAATAAGAGGAGAGTTGCTTGCAAATTTCCAGCTATTTTCAATGGTTGTTGGTGTTTTTGCTGTAATCTCTGTATTTTACAGTTTTGCCACTTCGAGATTTGGCCATTCTAGTCAGGAGAGGTTGCAGGAAGCTGATGGTGATTTGTAGATATTAAAGTAGCAGAGATATTCGTAAAAAGTTGAAGGCAGGAATTATGGCAAGGGTAGTGTTGAGTTAACCGAGACCTTGAAAACACGAGGTGACCATCTGTGGAGTTGGATTTTCTTATTGTGCAGCATTCCATTGATTTATATACATGTAATGCTCTTTTGATCCTTAAGAGTTGCTTAGGGGGTCATTTGAGTGCTACCTTTTTTTAGGGTTAGCAATGACATCTTATTTTTGTGTTCCACATGTTTTACTACAAGTCTGTTGATATGTTAAGAATTCTTCTTTTTTGTTTGTTTTTGGGGCTACAAATGTAAGTTACTACTGACTAACGCGTATTGTAATCGCACTTTGTTTACCCTAATTATTTACAAGTACCTTCGTGAGAATAAAAGGTCTTGCATGCACTAGGTGTATAATAAAGTTATTGAACAAATGAACACAGGGTAATTTTT ATGGGGTCATTTAAAGGTCATGTAGTTCCAGGAACACTGTTTTTGCTGGTGGGTTTATGGCATATGTGGTGCAGTGTGTACAGATATGTGAGAAGTCCGAATACATTCCGGATCCGGGTATGGAATCCGGTGCCGGGTTTTGATGGGAGGATCAAGTACTTGGAATTGTATGTGGTTGTGATTGGTTCTTTTATTGATTTGTGCATAGAACTTGTGTATTCACCTCATCTCAAGTACTTTGTAAATGGGGTTTTGAATCCTTCTCATATGAATAATTTTGAGCACTCTGGGATGCTTATCATGTTCTTCATCTTCGGCCTCGTCGGTCTTTTATCAGTAAAGACAAGCATTCTTCCCTTACCAGACGGAGCACTTACTTTGATCGGTGCAACAGCGTTCTCATCAGAGTACCTACTGTTTTACTTCCACTCAACAAATCACAAAGGCCTAGAAGGCTACTATCACTACATCCTAGTTCTCCTGATAGGCTTGTGTGTTCTAACTAGCGTTGTTGGCACACTTGTACCATCAAATTTCCCGCTTGATTTATCAAATAGTATTGCCATAACTCTACAAGGCCTTTGGTTTTACCAGACTGCGTTCACACTTTACGGCCCCATGATGCCACACGGGTGCCAACTTAAAGGAGATGACATTGTTTGTCATTCAGCTGATAGTCAAATAAGAGGAGAGTTGCTTGCAAATTTCCAGCTATTTTCAATGGTTGTTGGTGTTTTTGCTGTAATCTCTGTATTTTACAGTTTTGCCACTTCGAGATTTGGCCATTCTAGTCAGGAGAGGTTGCAGGAAGCTGATGGTGATTTGTAG MGSFKGHVVPGTLFLLVGLWHMWCSVYRYVRSPNTFRIRVWNPVPGFDGRIKYLELYVVVIGSFIDLCIELVYSPHLKYFVNGVLNPSHMNNFEHSGMLIMFFIFGLVGLLSVKTSILPLPDGALTLIGATAFSSEYLLFYFHSTNHKGLEGYYHYILVLLIGLCVLTSVVGTLVPSNFPLDLSNSIAITLQGLWFYQTAFTLYGPMMPHGCQLKGDDIVCHSADSQIRGELLANFQLFSMVVGVFAVISVFYSFATSRFGHSSQERLQEADGDL Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo23219.1 vs. NCBI nr
Match: gi|902204442|gb|KNA14867.1| (hypothetical protein SOVF_103380 [Spinacia oleracea]) HSP 1 Score: 562.0 bits (1447), Expect = 5.800e-157 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of Spo23219.1 vs. NCBI nr
Match: gi|731332909|ref|XP_010677458.1| (PREDICTED: transmembrane protein 45B-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 503.8 bits (1296), Expect = 1.900e-139 Identity = 242/275 (88.00%), Postives = 257/275 (93.45%), Query Frame = 1
BLAST of Spo23219.1 vs. NCBI nr
Match: gi|470128448|ref|XP_004300153.1| (PREDICTED: transmembrane protein 45B-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 431.4 bits (1108), Expect = 1.200e-117 Identity = 199/268 (74.25%), Postives = 229/268 (85.45%), Query Frame = 1
BLAST of Spo23219.1 vs. NCBI nr
Match: gi|720082247|ref|XP_010242529.1| (PREDICTED: transmembrane protein 45B-like [Nelumbo nucifera]) HSP 1 Score: 418.7 bits (1075), Expect = 7.900e-114 Identity = 196/272 (72.06%), Postives = 229/272 (84.19%), Query Frame = 1
BLAST of Spo23219.1 vs. NCBI nr
Match: gi|1000965222|ref|XP_015575134.1| (PREDICTED: transmembrane protein 45B [Ricinus communis]) HSP 1 Score: 418.3 bits (1074), Expect = 1.000e-113 Identity = 190/268 (70.90%), Postives = 231/268 (86.19%), Query Frame = 1
BLAST of Spo23219.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7V6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_103380 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 4.000e-157 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of Spo23219.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CH64_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g107680 PE=4 SV=1) HSP 1 Score: 503.8 bits (1296), Expect = 1.300e-139 Identity = 242/275 (88.00%), Postives = 257/275 (93.45%), Query Frame = 1
BLAST of Spo23219.1 vs. UniProtKB/TrEMBL
Match: B9S1J1_RICCO (Transmembrane protein 45a, putative OS=Ricinus communis GN=RCOM_0865410 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 7.200e-114 Identity = 190/268 (70.90%), Postives = 231/268 (86.19%), Query Frame = 1
BLAST of Spo23219.1 vs. UniProtKB/TrEMBL
Match: A0A067KGS4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10819 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.600e-113 Identity = 190/262 (72.52%), Postives = 232/262 (88.55%), Query Frame = 1
BLAST of Spo23219.1 vs. UniProtKB/TrEMBL
Match: W9SFT3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022842 PE=4 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 2.700e-113 Identity = 194/275 (70.55%), Postives = 229/275 (83.27%), Query Frame = 1
BLAST of Spo23219.1 vs. ExPASy Swiss-Prot
Match: TM45A_HUMAN (Transmembrane protein 45A OS=Homo sapiens GN=TMEM45A PE=2 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.600e-16 Identity = 65/211 (30.81%), Postives = 103/211 (48.82%), Query Frame = 1
BLAST of Spo23219.1 vs. ExPASy Swiss-Prot
Match: TM45B_DANRE (Transmembrane protein 45B OS=Danio rerio GN=tmem45b PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.800e-15 Identity = 64/224 (28.57%), Postives = 104/224 (46.43%), Query Frame = 1
BLAST of Spo23219.1 vs. ExPASy Swiss-Prot
Match: TM45B_BOVIN (Transmembrane protein 45B OS=Bos taurus GN=TMEM45B PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.400e-14 Identity = 58/211 (27.49%), Postives = 105/211 (49.76%), Query Frame = 1
BLAST of Spo23219.1 vs. ExPASy Swiss-Prot
Match: TM45B_XENLA (Transmembrane protein 45B OS=Xenopus laevis GN=tmem45b PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.300e-14 Identity = 64/209 (30.62%), Postives = 105/209 (50.24%), Query Frame = 1
BLAST of Spo23219.1 vs. ExPASy Swiss-Prot
Match: TM45B_HUMAN (Transmembrane protein 45B OS=Homo sapiens GN=TMEM45B PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.100e-13 Identity = 64/212 (30.19%), Postives = 104/212 (49.06%), Query Frame = 1
BLAST of Spo23219.1 vs. TAIR (Arabidopsis)
Match: AT1G32120.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 395.6 bits (1015), Expect = 2.500e-110 Identity = 183/263 (69.58%), Postives = 220/263 (83.65%), Query Frame = 1
BLAST of Spo23219.1 vs. TAIR (Arabidopsis)
Match: AT1G55240.1 (Family of unknown function (DUF716) ) HSP 1 Score: 157.1 bits (396), Expect = 1.500e-38 Identity = 84/261 (32.18%), Postives = 150/261 (57.47%), Query Frame = 1
BLAST of Spo23219.1 vs. TAIR (Arabidopsis)
Match: AT1G55230.1 (Family of unknown function (DUF716) ) HSP 1 Score: 151.8 bits (382), Expect = 6.300e-37 Identity = 82/273 (30.04%), Postives = 150/273 (54.95%), Query Frame = 1
BLAST of Spo23219.1 vs. TAIR (Arabidopsis)
Match: AT5G19870.1 (Family of unknown function (DUF716) ) HSP 1 Score: 134.0 bits (336), Expect = 1.400e-31 Identity = 83/272 (30.51%), Postives = 148/272 (54.41%), Query Frame = 1
BLAST of Spo23219.1 vs. TAIR (Arabidopsis)
Match: AT1G49470.1 (Family of unknown function (DUF716) ) HSP 1 Score: 131.7 bits (330), Expect = 6.800e-31 Identity = 80/266 (30.08%), Postives = 132/266 (49.62%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo23219.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo23219.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo23219.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo23219.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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