Spo23542.1 (mRNA)

Overview
NameSpo23542.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr6 : 24279063 .. 24281773 (+)
Sequence length1470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTTCATCAATTCCTAGATTCCTTTCGTTCGCAATTAGATTAAATAACCCACCATTTTCACTTATTACAAGAATCAACTTTTCAACTGCAGAAGAATTTTGCACCCATCTCTTAAATTACCCTCAACACCCTGAAAAAACCCTAGTGAAAATTACTTCTCAATTAGATGTTCAATGTGTTGGTGAGGTTTTGCATAGATTTTCCTCAAATCAACCTCAATTGGGTCTTCGTTTTTTCATATGGGCTGGTCTCCAGCCTAAGTATAGGCATACTCAATATATGTATAGCTCAGCTTGTAAGTTGCTCCAAATTCGCCGAAACCCGGGTAGGATTAGAGAGATTCTTGAGCGTTATTTGGTTGAAGGCTGTCAAACTAATGCGAAATTGTTTAAAGTTGTTCTTAATTTGTGTAGAGAAGCTAGGATTGCTGATGAGGGTTTGTGGGTATTGAGAAAGATGGGTGACTTTGATTGTCGACCGGATTCGACCATGTATAATGTGGTTATTGGGTTGTTTTGTGATAAGGGGGATCTTGATATGGCAATGGGGTTGATGAGGGAGATGGAATCATGTAATTTGTGTCCTGATATGATTACTTATATGTCAATGCTAAAGGGGTTTTCCTATGCTGGCAGATTGGAAGATGCTTGTCAGTTGTTTATGACTATGAAAGTTCATGGATGTGTTCCAAACTTGGTGACGTACTCTGCTCTCCTTGATGGGCTTTGTAGAGTTGGTAGTTTCGAGAGAGCGTTGGAGTTGTTGGCTGAGATGGAAAAGGAAGGTGGGGAGTGTACTCCAAATGTTATTACGTATACGTCAGTCATTCAGAGCTTGTGTGAAAATGGCAAGTCTATGCAGGCATTGCCGATTTTGGAGCGAATGGAGAGTTTTAAGTGCCATCCTAATAGGATAACTATGAGTGTGTTGATCCAAGGACTTTGTGGTGAAGGGTACATAGACAAGGCATTTAAACTTGTTAGTAATGTAGTTGTTGGAAGTCACGTCCCACGAGGTGAATGCTATAGTTCCCTTGTGATCTCTTTGTTGAGGATCAAAAGATTTGAGGAGGCAGATAAGCTTTTTATGTGGATGTTGGGAAGTGATATGAGGCCAGATGGGTTAGCATGTAGTGTCTTGATGAAGGATTTGTGTTTCAAAGGAAGATTTGTGGATGCTTTTAGTCTATATGAGGATATTGAGAAGAAGGGTTTTGTACTGACAATTGATTCTGATATATATTCAGCACTACTTCTTGGTCTTTGTGAGAAAAACCGTGAGGTGGAGGTGGCAAAACTGGCCAATTTTATGGTTGAGAAAGGAATTAAAATCAATGCTTCTTATATTGATGATATTCACAAGCACCTAAAAGGATCAATCAGGATGGAGTCACTTGCAGAATTGAGTGAGAATAGAAAATAAGGCTGAACCACACATTCTTTTTTTAGTTACATTCCTTGTTACTTGTATCCCCAGAGGACTTTTCGTGTTATAAAGTTAAGCTACTCATTGGCAACAGAAAATTCCTTTGTGAGACGTATCATTACTGAGGCAGAGTTTCCATTTGGCGGTACATGGTAAGCATCCCATGCAATATTTAGTTGATCTCTCTTCACTCTTCAATGTATTGTATATTATTGTTTGTAAAATACTGGAGTGATGTGAGGAATGCAGGGGAATAGGAACGAAATGTATTAGTCTACTGGATGTATATTTGGATCCTGGTCAATTGTTTGTTTGAAACCGTAAGACATTAGTCTTCCAAAATTTTGTTGAGAAATGACCTTATATTTGGCCGGATTTTGTTATCCTGACTTTGCCTTCGGCTCCTTAGTGGTATCCACCATGGTATGCAGGCTGGGCCACCCCAACCCCCTCCCACTTTTCGGGAAATATATTGTGCTAAGTTGGTTTTCCTGCAGGAGTGGCACATAACATTGCATATTCAATCTTCAGCAAGGACTTCAGAGGACCTTTCAATAACGCAGGCTTCTTGGCCGACATAGTCCTACGAACAAAAAGTAATTGGATGGCAACTATTTTTTGTTCGTAGGTCTCTGTCGGCCAAGCAGTCTGCGTTATTGGAAGCTCCTCTGAAGTCCTCGCTGAAGATTGAATATGCATTGTATATGTGACACTCTTGCTAGAAAACCAACTTAGCACAATATATTTCCTGAAAAGTGGGAAGAATTCTCAGCATAATAATCCTAAAAGAAACACTACTGCCTAATTGCCTTGTCATTTTCCTTTATATGCCAAGTCCTTCACCAAATAGTGAATTGAAGATATTATATATTACTCGTGGTTTCATGGAAAAACAATAAAGAACATAGCTATAAAATTTGGAAAGATTAATAATACTACCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCTCCGCCCCCTACAACAACAACAAAGGCCCTAAACCTGTCCGGTATGGCTGTATCAGGCAAAGAAATGGTCATGCTTCATCCTACTAGTTTGTAGGAGTTTCTTGTGGAACCTTGTGAATCATACTTGTAATTAAATCTTTGTTCGGAATTCTGTATCAGTAATATTCACAATAAAATTTCATATCGGCTTCAAAACTCTATATAGTAGAGTGATCATGCTTATTTGGCCGAATGTCTTACATTATGGTCTCTTCTTGTTACCCATTTATGTGAAATCTAATTAACCAAAATTGCTGTTTTCCAGA

mRNA sequence

ATGGCGATTTCATCAATTCCTAGATTCCTTTCGTTCGCAATTAGATTAAATAACCCACCATTTTCACTTATTACAAGAATCAACTTTTCAACTGCAGAAGAATTTTGCACCCATCTCTTAAATTACCCTCAACACCCTGAAAAAACCCTAGTGAAAATTACTTCTCAATTAGATGTTCAATGTGTTGGTGAGGTTTTGCATAGATTTTCCTCAAATCAACCTCAATTGGGTCTTCGTTTTTTCATATGGGCTGGTCTCCAGCCTAAGTATAGGCATACTCAATATATGTATAGCTCAGCTTGTAAGTTGCTCCAAATTCGCCGAAACCCGGGTAGGATTAGAGAGATTCTTGAGCGTTATTTGGTTGAAGGCTGTCAAACTAATGCGAAATTGTTTAAAGTTGTTCTTAATTTGTGTAGAGAAGCTAGGATTGCTGATGAGGGTTTGTGGGTATTGAGAAAGATGGGTGACTTTGATTGTCGACCGGATTCGACCATGTATAATGTGGTTATTGGGTTGTTTTGTGATAAGGGGGATCTTGATATGGCAATGGGGTTGATGAGGGAGATGGAATCATGTAATTTGTGTCCTGATATGATTACTTATATGTCAATGCTAAAGGGGTTTTCCTATGCTGGCAGATTGGAAGATGCTTGTCAGTTGTTTATGACTATGAAAGTTCATGGATGTGTTCCAAACTTGGTGACGTACTCTGCTCTCCTTGATGGGCTTTGTAGAGTTGGTAGTTTCGAGAGAGCGTTGGAGTTGTTGGCTGAGATGGAAAAGGAAGGTGGGGAGTGTACTCCAAATGTTATTACGTATACGTCAGTCATTCAGAGCTTGTGTGAAAATGGCAAGTCTATGCAGGCATTGCCGATTTTGGAGCGAATGGAGAGTTTTAAGTGCCATCCTAATAGGATAACTATGAGTGTGTTGATCCAAGGACTTTGTGGTGAAGGGTACATAGACAAGGCATTTAAACTTGTTAGTAATGTAGTTGTTGGAAGTCACGTCCCACGAGGTGAATGCTATAGTTCCCTTGTGATCTCTTTGTTGAGGATCAAAAGATTTGAGGAGGCAGATAAGCTTTTTATGTGGATGTTGGGAAGTGATATGAGGCCAGATGGGTTAGCATGTAGTGTCTTGATGAAGGATTTGTGTTTCAAAGGAAGATTTGTGGATGCTTTTAGTCTATATGAGGATATTGAGAAGAAGGGTTTTGTACTGACAATTGATTCTGATATATATTCAGCACTACTTCTTGGTCTTTGTGAGAAAAACCGTGAGGTGGAGGTGGCAAAACTGGCCAATTTTATGGTTGAGAAAGGAATTAAAATCAATGCTTCTTATATTGATGATATTCACAAGCACCTAAAAGGATCAATCAGGATGGAGTCACTTGCAGAATTGAAAAATTCCTTTGTGAGACGTATCATTACTGAGGCAGAGTTTCCATTTGGCGGTACATGA

Coding sequence (CDS)

ATGGCGATTTCATCAATTCCTAGATTCCTTTCGTTCGCAATTAGATTAAATAACCCACCATTTTCACTTATTACAAGAATCAACTTTTCAACTGCAGAAGAATTTTGCACCCATCTCTTAAATTACCCTCAACACCCTGAAAAAACCCTAGTGAAAATTACTTCTCAATTAGATGTTCAATGTGTTGGTGAGGTTTTGCATAGATTTTCCTCAAATCAACCTCAATTGGGTCTTCGTTTTTTCATATGGGCTGGTCTCCAGCCTAAGTATAGGCATACTCAATATATGTATAGCTCAGCTTGTAAGTTGCTCCAAATTCGCCGAAACCCGGGTAGGATTAGAGAGATTCTTGAGCGTTATTTGGTTGAAGGCTGTCAAACTAATGCGAAATTGTTTAAAGTTGTTCTTAATTTGTGTAGAGAAGCTAGGATTGCTGATGAGGGTTTGTGGGTATTGAGAAAGATGGGTGACTTTGATTGTCGACCGGATTCGACCATGTATAATGTGGTTATTGGGTTGTTTTGTGATAAGGGGGATCTTGATATGGCAATGGGGTTGATGAGGGAGATGGAATCATGTAATTTGTGTCCTGATATGATTACTTATATGTCAATGCTAAAGGGGTTTTCCTATGCTGGCAGATTGGAAGATGCTTGTCAGTTGTTTATGACTATGAAAGTTCATGGATGTGTTCCAAACTTGGTGACGTACTCTGCTCTCCTTGATGGGCTTTGTAGAGTTGGTAGTTTCGAGAGAGCGTTGGAGTTGTTGGCTGAGATGGAAAAGGAAGGTGGGGAGTGTACTCCAAATGTTATTACGTATACGTCAGTCATTCAGAGCTTGTGTGAAAATGGCAAGTCTATGCAGGCATTGCCGATTTTGGAGCGAATGGAGAGTTTTAAGTGCCATCCTAATAGGATAACTATGAGTGTGTTGATCCAAGGACTTTGTGGTGAAGGGTACATAGACAAGGCATTTAAACTTGTTAGTAATGTAGTTGTTGGAAGTCACGTCCCACGAGGTGAATGCTATAGTTCCCTTGTGATCTCTTTGTTGAGGATCAAAAGATTTGAGGAGGCAGATAAGCTTTTTATGTGGATGTTGGGAAGTGATATGAGGCCAGATGGGTTAGCATGTAGTGTCTTGATGAAGGATTTGTGTTTCAAAGGAAGATTTGTGGATGCTTTTAGTCTATATGAGGATATTGAGAAGAAGGGTTTTGTACTGACAATTGATTCTGATATATATTCAGCACTACTTCTTGGTCTTTGTGAGAAAAACCGTGAGGTGGAGGTGGCAAAACTGGCCAATTTTATGGTTGAGAAAGGAATTAAAATCAATGCTTCTTATATTGATGATATTCACAAGCACCTAAAAGGATCAATCAGGATGGAGTCACTTGCAGAATTGAAAAATTCCTTTGTGAGACGTATCATTACTGAGGCAGAGTTTCCATTTGGCGGTACATGA

Protein sequence

MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQCVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERYLVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALLLGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAELKNSFVRRIITEAEFPFGGT
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo23542Spo23542gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo23542.1Spo23542.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23542.1.exon.1Spo23542.1.exon.1exon
Spo23542.1.exon.2Spo23542.1.exon.2exon
Spo23542.1.exon.3Spo23542.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo23542.1.CDS.1Spo23542.1.CDS.1CDS
Spo23542.1.CDS.2Spo23542.1.CDS.2CDS
Spo23542.1.CDS.3Spo23542.1.CDS.3CDS


Homology
BLAST of Spo23542.1 vs. NCBI nr
Match: gi|902209324|gb|KNA16182.1| (hypothetical protein SOVF_091390 [Spinacia oleracea])

HSP 1 Score: 958.0 bits (2475), Expect = 6.400e-276
Identity = 469/473 (99.15%), Postives = 470/473 (99.37%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ 60
           MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ
Sbjct: 1   MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ 60

Query: 61  CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY 120
           CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY
Sbjct: 61  CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY 120

Query: 121 LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL 180
           LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL
Sbjct: 121 LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL 180

Query: 181 DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL 240
           DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL
Sbjct: 181 DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL 240

Query: 241 LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF 300
           LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF
Sbjct: 241 LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF 300

Query: 301 KCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA 360
           KCHPNRITMSVLIQGLCGEGYI KAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA
Sbjct: 301 KCHPNRITMSVLIQGLCGEGYIHKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA 360

Query: 361 DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL 420
           DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL
Sbjct: 361 DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL 420

Query: 421 LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAELKNS 474
           LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL  +
Sbjct: 421 LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAELSEN 473

BLAST of Spo23542.1 vs. NCBI nr
Match: gi|731331620|ref|XP_010676754.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 758.4 bits (1957), Expect = 7.500e-216
Identity = 366/470 (77.87%), Postives = 412/470 (87.66%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ 60
           MAISS+   +S   R+ +PPF L   INFSTAEEFCTHLLN+P++PEKTL++I +QLD +
Sbjct: 1   MAISSLRGIVSSTFRVKSPPFLLTKTINFSTAEEFCTHLLNHPKNPEKTLIRIAAQLDSK 60

Query: 61  CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY 120
           CV EVLHRF SN+PQLGLRFFIWAGLQPKYRHTQYMYS ACKLLQIRRNPGRIREILE Y
Sbjct: 61  CVSEVLHRFCSNEPQLGLRFFIWAGLQPKYRHTQYMYSLACKLLQIRRNPGRIREILECY 120

Query: 121 LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL 180
            VEG  TN KLFKVVLNLCREAR ADEGLWVLRKMG+FDCRPDSTMYNVVIGLFC+KGDL
Sbjct: 121 RVEGYLTNVKLFKVVLNLCREARTADEGLWVLRKMGEFDCRPDSTMYNVVIGLFCEKGDL 180

Query: 181 DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL 240
           DMA+GLMREMESCNLCPDMIT+MSMLKGF   GRLEDAC+LF  MK HGC PNLV YSAL
Sbjct: 181 DMAIGLMREMESCNLCPDMITFMSMLKGFCNVGRLEDACELFKIMKSHGCTPNLVVYSAL 240

Query: 241 LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF 300
           LDGLCRVGSFE+A+ELL EMEKEGGEC+P+VITYTSV++SLCE+GKS++AL IL+RME  
Sbjct: 241 LDGLCRVGSFEKAMELLGEMEKEGGECSPSVITYTSVVRSLCEHGKSVEALSILDRMEGS 300

Query: 301 KCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA 360
           KC PNR+TMSVLIQGLCGEGY DKAFKLVS+VV   HV   ECYSSLVISLLRI RFEEA
Sbjct: 301 KCQPNRVTMSVLIQGLCGEGYPDKAFKLVSDVVARGHVSGSECYSSLVISLLRINRFEEA 360

Query: 361 DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL 420
            KLF WML + +RPDGLA S+L+KD+C K RF+DAFSLYEDI KK  V+TIDSDI+S LL
Sbjct: 361 HKLFKWMLDNAVRPDGLASSILIKDMCLKERFIDAFSLYEDIAKKDTVVTIDSDIFSILL 420

Query: 421 LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
           +GLC++N EVE+AKLA+ MVEKGI+INASY+D I+KHLKGSI MESLA+L
Sbjct: 421 VGLCQQNHEVELAKLASLMVEKGIQINASYVDVIYKHLKGSICMESLAQL 470

BLAST of Spo23542.1 vs. NCBI nr
Match: gi|567895518|ref|XP_006440247.1| (hypothetical protein CICLE_v10019985mg [Citrus clementina])

HSP 1 Score: 528.5 bits (1360), Expect = 1.300e-146
Identity = 254/466 (54.51%), Postives = 334/466 (71.67%), Query Frame = 1

		  

Query: 5   SIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQCVGE 64
           S+ R LS ++ + N     +     S AE F THL   P + EKTL  + ++LD  CV E
Sbjct: 5   SLSRILSSSVNIKNSKIFALHFTTASPAERFYTHLQKNPNNIEKTLATVKAKLDSTCVIE 64

Query: 65  VLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERYLVEG 124
           VLHR   +Q Q+G+RFFIWA LQ  YRH+ +MY+ AC++ +I++NP  I +++E Y  EG
Sbjct: 65  VLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEG 124

Query: 125 CQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDLDMAM 184
           C  + K+ KV+ NLC +AR+A+E +WVLRKM +FD RPD+ +YN VI LFC+KGD+  A 
Sbjct: 125 CVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD 184

Query: 185 GLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSALLDGL 244
            LM+ M   +L PD+ITY+SM+KGF  AGRLEDAC LF  MK HGC  NLV YSALLDG+
Sbjct: 185 ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244

Query: 245 CRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESFKCHP 304
           CR+GS ERALELL EMEKEGG+C+PNV+TYTSVIQ  C  G   +AL IL+RME+F C P
Sbjct: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAFGCAP 304

Query: 305 NRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEADKLF 364
           NR+T+S LI+G C EG +D+A++L+  VV G  V  G CYSSLV+ L+R KR +EA+KLF
Sbjct: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364

Query: 365 MWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALLLGLC 424
             ML S ++PDGLACSV++++LC +G+ ++ F LYEDIEK GF+ ++DSDI+S LLLGLC
Sbjct: 365 SKMLASGVKPDGLACSVMIRELCLRGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLC 424

Query: 425 EKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
            KN  VE AKLA FM++K I +   Y+D I +HLK S   E +  L
Sbjct: 425 RKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEELITNL 470

BLAST of Spo23542.1 vs. NCBI nr
Match: gi|590676512|ref|XP_007039757.1| (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 528.5 bits (1360), Expect = 1.300e-146
Identity = 257/472 (54.45%), Postives = 346/472 (73.31%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRI--NFSTAEEFCTHLLNYPQHPEKTLVKITSQLD 60
           M I S+ RF+S +I  ++ P  + T +    S+A++F THL     + EKTL  + S+LD
Sbjct: 1   MPILSLSRFISISI--SSKPNKIFTFLFSTASSADKFFTHLQKKQSNIEKTLALVNSKLD 60

Query: 61  VQCVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILE 120
             CV EVL R   ++ Q+GLRFFIWAGLQ  YRH+ YMYS AC+ L+I++NP  + +++E
Sbjct: 61  SNCVCEVLERCCFDKSQMGLRFFIWAGLQSNYRHSSYMYSKACEFLKIKQNPFLVLDVIE 120

Query: 121 RYLVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKG 180
            Y VE C  N K+FKVVLNLCREARI DE L VLRKM +F+ RPD+T YNVVI L C+KG
Sbjct: 121 AYKVEKCLVNVKMFKVVLNLCREARITDEALLVLRKMPEFNLRPDTTTYNVVIRLICEKG 180

Query: 181 DLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYS 240
           D+DMA  LM++M   +L PDMITY++M+KGF  AGRLEDAC LF  M+ HGC PN V YS
Sbjct: 181 DMDMADKLMKDMGLIDLYPDMITYLAMIKGFCNAGRLEDACGLFQVMREHGCFPNAVAYS 240

Query: 241 ALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERME 300
           ALL+G+CR GS E+ALELL EMEKEG  C+PNVITYTSVIQS CE G++ +AL +L+RM 
Sbjct: 241 ALLEGICRYGSVEKALELLGEMEKEGDGCSPNVITYTSVIQSFCEKGQTTKALRVLDRMG 300

Query: 301 SFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFE 360
           +  C PNR+T+S LI+ LC EG++++A+KL+  VV G  V  G+CYSSLV+SL+RIKR +
Sbjct: 301 TCGCAPNRVTVSTLIKRLCAEGHVEEAYKLIDKVVPGGGVSDGDCYSSLVVSLIRIKRLD 360

Query: 361 EADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSA 420
           EA+KLF  ML +  +PD +ACS++++++C +GR +D F LYE+IE+  ++ +ID+DIYS 
Sbjct: 361 EAEKLFRKMLATGAKPDSIACSIMIREICQEGRVLDGFYLYEEIERMRYLSSIDADIYSI 420

Query: 421 LLLGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
           LL+GLC ++  VE AKLA  M+EK I++ A Y+D I +HLK     + + EL
Sbjct: 421 LLVGLCRQSHSVEAAKLARSMLEKRIRLKAPYVDKIIEHLKNCGDKQLVTEL 470

BLAST of Spo23542.1 vs. NCBI nr
Match: gi|568846594|ref|XP_006477135.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Citrus sinensis])

HSP 1 Score: 524.6 bits (1350), Expect = 1.800e-145
Identity = 253/466 (54.29%), Postives = 332/466 (71.24%), Query Frame = 1

		  

Query: 5   SIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQCVGE 64
           S+ R LS ++ + N     +     S AE F THL   P + EKTL  + ++LD  CV E
Sbjct: 5   SLSRILSSSVNIKNSKIFALHFTTASPAERFYTHLQKNPNNIEKTLATVKAKLDSTCVIE 64

Query: 65  VLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERYLVEG 124
           VLHR   +Q Q+G+RFFIWA LQ  YRH+ +MY+ AC++ +I++NP  I +++E Y  EG
Sbjct: 65  VLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEG 124

Query: 125 CQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDLDMAM 184
           C  + K+ KV+ NLC +AR+A+E +WVLRKM +FD RPD+ +YN VI LFC+KGD+  A 
Sbjct: 125 CVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD 184

Query: 185 GLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSALLDGL 244
            LM+ M   +L PD+ITY+SM+KGF  AGRLEDAC LF  MK HGC  NLV YSALLDG+
Sbjct: 185 ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244

Query: 245 CRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESFKCHP 304
           CR+GS ERALELL EMEKEGG+C+PNV+TYTSVIQ  C  G   +AL IL+RME+  C P
Sbjct: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAP 304

Query: 305 NRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEADKLF 364
           NR+T+S LI+G C EG +D+A++L+  VV G  V  G CYSSLV+ L+R KR +EA+KLF
Sbjct: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364

Query: 365 MWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALLLGLC 424
             ML S ++PDGLACSV++++LC  G+ ++ F LYEDIEK GF+ ++DSDI+S LLLGLC
Sbjct: 365 SKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLC 424

Query: 425 EKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
            KN  VE AKLA FM++K I +   Y+D I +HLK S   E +  L
Sbjct: 425 RKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEELITNL 470

BLAST of Spo23542.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBN6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_091390 PE=4 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 4.500e-276
Identity = 469/473 (99.15%), Postives = 470/473 (99.37%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ 60
           MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ
Sbjct: 1   MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ 60

Query: 61  CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY 120
           CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY
Sbjct: 61  CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY 120

Query: 121 LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL 180
           LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL
Sbjct: 121 LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL 180

Query: 181 DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL 240
           DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL
Sbjct: 181 DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL 240

Query: 241 LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF 300
           LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF
Sbjct: 241 LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF 300

Query: 301 KCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA 360
           KCHPNRITMSVLIQGLCGEGYI KAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA
Sbjct: 301 KCHPNRITMSVLIQGLCGEGYIHKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA 360

Query: 361 DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL 420
           DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL
Sbjct: 361 DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL 420

Query: 421 LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAELKNS 474
           LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL  +
Sbjct: 421 LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAELSEN 473

BLAST of Spo23542.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F8W0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g102790 PE=4 SV=1)

HSP 1 Score: 758.4 bits (1957), Expect = 5.200e-216
Identity = 366/470 (77.87%), Postives = 412/470 (87.66%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQ 60
           MAISS+   +S   R+ +PPF L   INFSTAEEFCTHLLN+P++PEKTL++I +QLD +
Sbjct: 1   MAISSLRGIVSSTFRVKSPPFLLTKTINFSTAEEFCTHLLNHPKNPEKTLIRIAAQLDSK 60

Query: 61  CVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERY 120
           CV EVLHRF SN+PQLGLRFFIWAGLQPKYRHTQYMYS ACKLLQIRRNPGRIREILE Y
Sbjct: 61  CVSEVLHRFCSNEPQLGLRFFIWAGLQPKYRHTQYMYSLACKLLQIRRNPGRIREILECY 120

Query: 121 LVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDL 180
            VEG  TN KLFKVVLNLCREAR ADEGLWVLRKMG+FDCRPDSTMYNVVIGLFC+KGDL
Sbjct: 121 RVEGYLTNVKLFKVVLNLCREARTADEGLWVLRKMGEFDCRPDSTMYNVVIGLFCEKGDL 180

Query: 181 DMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSAL 240
           DMA+GLMREMESCNLCPDMIT+MSMLKGF   GRLEDAC+LF  MK HGC PNLV YSAL
Sbjct: 181 DMAIGLMREMESCNLCPDMITFMSMLKGFCNVGRLEDACELFKIMKSHGCTPNLVVYSAL 240

Query: 241 LDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESF 300
           LDGLCRVGSFE+A+ELL EMEKEGGEC+P+VITYTSV++SLCE+GKS++AL IL+RME  
Sbjct: 241 LDGLCRVGSFEKAMELLGEMEKEGGECSPSVITYTSVVRSLCEHGKSVEALSILDRMEGS 300

Query: 301 KCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEA 360
           KC PNR+TMSVLIQGLCGEGY DKAFKLVS+VV   HV   ECYSSLVISLLRI RFEEA
Sbjct: 301 KCQPNRVTMSVLIQGLCGEGYPDKAFKLVSDVVARGHVSGSECYSSLVISLLRINRFEEA 360

Query: 361 DKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALL 420
            KLF WML + +RPDGLA S+L+KD+C K RF+DAFSLYEDI KK  V+TIDSDI+S LL
Sbjct: 361 HKLFKWMLDNAVRPDGLASSILIKDMCLKERFIDAFSLYEDIAKKDTVVTIDSDIFSILL 420

Query: 421 LGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
           +GLC++N EVE+AKLA+ MVEKGI+INASY+D I+KHLKGSI MESLA+L
Sbjct: 421 VGLCQQNHEVELAKLASLMVEKGIQINASYVDVIYKHLKGSICMESLAQL 470

BLAST of Spo23542.1 vs. UniProtKB/TrEMBL
Match: V4T030_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019985mg PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 8.800e-147
Identity = 254/466 (54.51%), Postives = 334/466 (71.67%), Query Frame = 1

		  

Query: 5   SIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQCVGE 64
           S+ R LS ++ + N     +     S AE F THL   P + EKTL  + ++LD  CV E
Sbjct: 5   SLSRILSSSVNIKNSKIFALHFTTASPAERFYTHLQKNPNNIEKTLATVKAKLDSTCVIE 64

Query: 65  VLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERYLVEG 124
           VLHR   +Q Q+G+RFFIWA LQ  YRH+ +MY+ AC++ +I++NP  I +++E Y  EG
Sbjct: 65  VLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEG 124

Query: 125 CQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDLDMAM 184
           C  + K+ KV+ NLC +AR+A+E +WVLRKM +FD RPD+ +YN VI LFC+KGD+  A 
Sbjct: 125 CVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD 184

Query: 185 GLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSALLDGL 244
            LM+ M   +L PD+ITY+SM+KGF  AGRLEDAC LF  MK HGC  NLV YSALLDG+
Sbjct: 185 ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244

Query: 245 CRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESFKCHP 304
           CR+GS ERALELL EMEKEGG+C+PNV+TYTSVIQ  C  G   +AL IL+RME+F C P
Sbjct: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEAFGCAP 304

Query: 305 NRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEADKLF 364
           NR+T+S LI+G C EG +D+A++L+  VV G  V  G CYSSLV+ L+R KR +EA+KLF
Sbjct: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364

Query: 365 MWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALLLGLC 424
             ML S ++PDGLACSV++++LC +G+ ++ F LYEDIEK GF+ ++DSDI+S LLLGLC
Sbjct: 365 SKMLASGVKPDGLACSVMIRELCLRGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLC 424

Query: 425 EKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
            KN  VE AKLA FM++K I +   Y+D I +HLK S   E +  L
Sbjct: 425 RKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEELITNL 470

BLAST of Spo23542.1 vs. UniProtKB/TrEMBL
Match: A0A061G4E0_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_015917 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 8.800e-147
Identity = 257/472 (54.45%), Postives = 346/472 (73.31%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRI--NFSTAEEFCTHLLNYPQHPEKTLVKITSQLD 60
           M I S+ RF+S +I  ++ P  + T +    S+A++F THL     + EKTL  + S+LD
Sbjct: 1   MPILSLSRFISISI--SSKPNKIFTFLFSTASSADKFFTHLQKKQSNIEKTLALVNSKLD 60

Query: 61  VQCVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILE 120
             CV EVL R   ++ Q+GLRFFIWAGLQ  YRH+ YMYS AC+ L+I++NP  + +++E
Sbjct: 61  SNCVCEVLERCCFDKSQMGLRFFIWAGLQSNYRHSSYMYSKACEFLKIKQNPFLVLDVIE 120

Query: 121 RYLVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKG 180
            Y VE C  N K+FKVVLNLCREARI DE L VLRKM +F+ RPD+T YNVVI L C+KG
Sbjct: 121 AYKVEKCLVNVKMFKVVLNLCREARITDEALLVLRKMPEFNLRPDTTTYNVVIRLICEKG 180

Query: 181 DLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYS 240
           D+DMA  LM++M   +L PDMITY++M+KGF  AGRLEDAC LF  M+ HGC PN V YS
Sbjct: 181 DMDMADKLMKDMGLIDLYPDMITYLAMIKGFCNAGRLEDACGLFQVMREHGCFPNAVAYS 240

Query: 241 ALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERME 300
           ALL+G+CR GS E+ALELL EMEKEG  C+PNVITYTSVIQS CE G++ +AL +L+RM 
Sbjct: 241 ALLEGICRYGSVEKALELLGEMEKEGDGCSPNVITYTSVIQSFCEKGQTTKALRVLDRMG 300

Query: 301 SFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFE 360
           +  C PNR+T+S LI+ LC EG++++A+KL+  VV G  V  G+CYSSLV+SL+RIKR +
Sbjct: 301 TCGCAPNRVTVSTLIKRLCAEGHVEEAYKLIDKVVPGGGVSDGDCYSSLVVSLIRIKRLD 360

Query: 361 EADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSA 420
           EA+KLF  ML +  +PD +ACS++++++C +GR +D F LYE+IE+  ++ +ID+DIYS 
Sbjct: 361 EAEKLFRKMLATGAKPDSIACSIMIREICQEGRVLDGFYLYEEIERMRYLSSIDADIYSI 420

Query: 421 LLLGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
           LL+GLC ++  VE AKLA  M+EK I++ A Y+D I +HLK     + + EL
Sbjct: 421 LLVGLCRQSHSVEAAKLARSMLEKRIRLKAPYVDKIIEHLKNCGDKQLVTEL 470

BLAST of Spo23542.1 vs. UniProtKB/TrEMBL
Match: A0A067FDR3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011905mg PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 1.300e-145
Identity = 253/466 (54.29%), Postives = 332/466 (71.24%), Query Frame = 1

		  

Query: 5   SIPRFLSFAIRLNNPPFSLITRINFSTAEEFCTHLLNYPQHPEKTLVKITSQLDVQCVGE 64
           S+ R LS ++ + N     +     S AE F THL   P + EKTL  + ++LD  CV E
Sbjct: 5   SLSRILSSSVNIKNSKIFALHFTTASPAERFYTHLQKNPNNIEKTLATVKAKLDSTCVIE 64

Query: 65  VLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILERYLVEG 124
           VLHR   +Q Q+G+RFFIWA LQ  YRH+ +MY+ AC++ +I++NP  I +++E Y  EG
Sbjct: 65  VLHRCFPSQSQMGIRFFIWAALQSSYRHSSFMYNRACEMSRIKQNPSIIIDVVEAYKEEG 124

Query: 125 CQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGDLDMAM 184
           C  + K+ KV+ NLC +AR+A+E +WVLRKM +FD RPD+ +YN VI LFC+KGD+  A 
Sbjct: 125 CVVSVKMMKVIFNLCEKARLANEAMWVLRKMPEFDLRPDTIIYNNVIRLFCEKGDMIAAD 184

Query: 185 GLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSALLDGL 244
            LM+ M   +L PD+ITY+SM+KGF  AGRLEDAC LF  MK HGC  NLV YSALLDG+
Sbjct: 185 ELMKGMGLIDLYPDIITYVSMIKGFCNAGRLEDACGLFKVMKRHGCAANLVAYSALLDGI 244

Query: 245 CRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPILERMESFKCHP 304
           CR+GS ERALELL EMEKEGG+C+PNV+TYTSVIQ  C  G   +AL IL+RME+  C P
Sbjct: 245 CRLGSMERALELLGEMEKEGGDCSPNVVTYTSVIQIFCGKGMMKEALGILDRMEALGCAP 304

Query: 305 NRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRIKRFEEADKLF 364
           NR+T+S LI+G C EG +D+A++L+  VV G  V  G CYSSLV+ L+R KR +EA+KLF
Sbjct: 305 NRVTISTLIKGFCVEGNLDEAYQLIDKVVAGGSVSSGGCYSSLVVELVRTKRLKEAEKLF 364

Query: 365 MWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIYSALLLGLC 424
             ML S ++PDGLACSV++++LC  G+ ++ F LYEDIEK GF+ ++DSDI+S LLLGLC
Sbjct: 365 SKMLASGVKPDGLACSVMIRELCLGGQVLEGFCLYEDIEKIGFLSSVDSDIHSVLLLGLC 424

Query: 425 EKNREVEVAKLANFMVEKGIKINASYIDDIHKHLKGSIRMESLAEL 471
            KN  VE AKLA FM++K I +   Y+D I +HLK S   E +  L
Sbjct: 425 RKNHSVEAAKLARFMLKKRIWLQGPYVDKIVEHLKKSGDEELITNL 470

BLAST of Spo23542.1 vs. ExPASy Swiss-Prot
Match: PP422_ARATH (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana GN=At5g47360 PE=2 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.000e-111
Identity = 214/463 (46.22%), Postives = 293/463 (63.28%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRIN-FSTAEEFCTHLLNYPQHPEKTLVKITSQLDV 60
           M  S I R +S ++R      S +  +   S AE     L     + EK L     QLD 
Sbjct: 1   MPNSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDS 60

Query: 61  QCVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILER 120
            C+ EVL R   NQ Q GLRFFIWAG    +RH+ YMY+ AC +L+IR  P  I+ ++E 
Sbjct: 61  SCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIES 120

Query: 121 YLVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGD 180
           Y  E C  N K  ++VL LC +A +ADE LWVLRK  +F+   D+  YN+VI LF DKGD
Sbjct: 121 YRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGD 180

Query: 181 LDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSA 240
           L++A  L++EM+   L PD+ITY SM+ G+  AG+++DA +L   M  H CV N VTYS 
Sbjct: 181 LNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSR 240

Query: 241 LLDGLCRVGSFERALELLAEMEKE--GGECTPNVITYTSVIQSLCENGKSMQALPILERM 300
           +L+G+C+ G  ERALELLAEMEKE  GG  +PN +TYT VIQ+ CE  +  +AL +L+RM
Sbjct: 241 ILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300

Query: 301 ESFKCHPNRITMSVLIQGLCGEGYIDKAF-KLVSNVVVGSHVPRGECYSSLVISLLRIKR 360
            +  C PNR+T  VLIQG+       KA  KL+  +V    V   EC+SS  +SL+R+KR
Sbjct: 301 GNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKR 360

Query: 361 FEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIY 420
           +EEA+K+F  ML   +RPDGLACS + ++LC   R++D F LY++IEKK    TIDSDI+
Sbjct: 361 WEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIH 420

Query: 421 SALLLGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLK 460
           + LLLGLC++    E AKLA  M++K +++  S+++ I + LK
Sbjct: 421 AVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALK 463

BLAST of Spo23542.1 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.800e-42
Identity = 102/334 (30.54%), Postives = 171/334 (51.20%), Query Frame = 1

		  

Query: 116 ILERYLVEGCQTNAKLFKVVLN-LCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLF 175
           +++R +  G Q N   +  VLN +C+  + A   + +LRKM + + + D+  Y+++I   
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGL 274

Query: 176 CDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNL 235
           C  G LD A  L  EME      D+ITY +++ GF  AGR +D  +L   M      PN+
Sbjct: 275 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 334

Query: 236 VTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPIL 295
           VT+S L+D   + G    A +LL EM + G    PN ITY S+I   C+  +  +A+ ++
Sbjct: 335 VTFSVLIDSFVKEGKLREADQLLKEMMQRG--IAPNTITYNSLIDGFCKENRLEEAIQMV 394

Query: 296 ERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRI 355
           + M S  C P+ +T ++LI G C    ID   +L   + +   +     Y++LV    + 
Sbjct: 395 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 454

Query: 356 KRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSD 415
            + E A KLF  M+   +RPD ++  +L+  LC  G    A  ++  IEK    + +D  
Sbjct: 455 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS--KMELDIG 514

Query: 416 IYSALLLGLCEKNREVEVAKLANFMVEKGIKINA 449
           IY  ++ G+C  ++  +   L   +  KG+K++A
Sbjct: 515 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543

BLAST of Spo23542.1 vs. ExPASy Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.600e-40
Identity = 92/334 (27.54%), Postives = 178/334 (53.29%), Query Frame = 1

		  

Query: 115 EILERYLVEGCQTNAKLFKVVLNL-CREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGL 174
           E+L+R L   C  +   + +++   CR++ +    + +L +M D  C PD   YNV++  
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVG-HAMKLLDEMRDRGCTPDVVTYNVLVNG 284

Query: 175 FCDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPN 234
            C +G LD A+  + +M S    P++IT+  +L+     GR  DA +L   M   G  P+
Sbjct: 285 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 344

Query: 235 LVTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPI 294
           +VT++ L++ LCR G   RA+++L +M + G  C PN ++Y  ++   C+  K  +A+  
Sbjct: 345 VVTFNILINFLCRKGLLGRAIDILEKMPQHG--CQPNSLSYNPLLHGFCKEKKMDRAIEY 404

Query: 295 LERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLR 354
           LERM S  C+P+ +T + ++  LC +G ++ A ++++ +      P    Y++++  L +
Sbjct: 405 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 464

Query: 355 IKRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDS 414
             +  +A KL   M   D++PD +  S L+  L  +G+  +A   + + E+ G  +  ++
Sbjct: 465 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG--IRPNA 524

Query: 415 DIYSALLLGLCEKNREVEVAKLANFMVEKGIKIN 448
             +++++LGLC+  +         FM+ +G K N
Sbjct: 525 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553

BLAST of Spo23542.1 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.900e-40
Identity = 100/331 (30.21%), Postives = 168/331 (50.76%), Query Frame = 1

		  

Query: 116 ILERYLVEGCQTNAKLFKVVLN-LCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLF 175
           +++R +  G Q N   +  VL  +C+  + A   + +LRKM +   + D+  Y+++I   
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-LAMELLRKMEERKIKLDAVKYSIIIDGL 258

Query: 176 CDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNL 235
           C  G LD A  L  EME      D+I Y ++++GF YAGR +D  +L   M      P++
Sbjct: 259 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 318

Query: 236 VTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPIL 295
           V +SAL+D   + G    A EL  EM + G   +P+ +TYTS+I   C+  +  +A  +L
Sbjct: 319 VAFSALIDCFVKEGKLREAEELHKEMIQRG--ISPDTVTYTSLIDGFCKENQLDKANHML 378

Query: 296 ERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRI 355
           + M S  C PN  T ++LI G C    ID   +L   + +   V     Y++L+     +
Sbjct: 379 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 438

Query: 356 KRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSD 415
            + E A +LF  M+   +RPD ++  +L+  LC  G    A  ++E IEK    + +D  
Sbjct: 439 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS--KMELDIG 498

Query: 416 IYSALLLGLCEKNREVEVAKLANFMVEKGIK 446
           IY+ ++ G+C  ++  +   L   +  KG+K
Sbjct: 499 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524

BLAST of Spo23542.1 vs. ExPASy Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.000e-39
Identity = 97/341 (28.45%), Postives = 173/341 (50.73%), Query Frame = 1

		  

Query: 111 GRIRE---ILERYLVEGCQTNAKLFKVVLN-LCREARIADEGLWVLRKMGDFDCRPDSTM 170
           G++ E   +++R +  GCQ +   +  ++N +CR    +   L +LRKM + + + D   
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS-LALDLLRKMEERNVKADVFT 231

Query: 171 YNVVIGLFCDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMK 230
           Y+ +I   C  G +D A+ L +EME+  +   ++TY S+++G   AG+  D   L   M 
Sbjct: 232 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 291

Query: 231 VHGCVPNLVTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGK 290
               VPN++T++ LLD   + G  + A EL  EM   G   +PN+ITY +++   C   +
Sbjct: 292 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNR 351

Query: 291 SMQALPILERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSS 350
             +A  +L+ M   KC P+ +T + LI+G C    +D   K+  N+     V     YS 
Sbjct: 352 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 411

Query: 351 LVISLLRIKRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKG 410
           LV    +  + + A++LF  M+   + PD +   +L+  LC  G+   A  ++ED++K  
Sbjct: 412 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 471

Query: 411 FVLTIDSDIYSALLLGLCEKNREVEVAKLANFMVEKGIKIN 448
             L I   +Y+ ++ G+C+  +  +   L   +  KG+K N
Sbjct: 472 MDLGI--VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507

BLAST of Spo23542.1 vs. TAIR (Arabidopsis)
Match: AT5G47360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 405.2 bits (1040), Expect = 5.700e-113
Identity = 214/463 (46.22%), Postives = 293/463 (63.28%), Query Frame = 1

		  

Query: 1   MAISSIPRFLSFAIRLNNPPFSLITRIN-FSTAEEFCTHLLNYPQHPEKTLVKITSQLDV 60
           M  S I R +S ++R      S +  +   S AE     L     + EK L     QLD 
Sbjct: 1   MPNSLISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDS 60

Query: 61  QCVGEVLHRFSSNQPQLGLRFFIWAGLQPKYRHTQYMYSSACKLLQIRRNPGRIREILER 120
            C+ EVL R   NQ Q GLRFFIWAG    +RH+ YMY+ AC +L+IR  P  I+ ++E 
Sbjct: 61  SCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIES 120

Query: 121 YLVEGCQTNAKLFKVVLNLCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLFCDKGD 180
           Y  E C  N K  ++VL LC +A +ADE LWVLRK  +F+   D+  YN+VI LF DKGD
Sbjct: 121 YRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGD 180

Query: 181 LDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNLVTYSA 240
           L++A  L++EM+   L PD+ITY SM+ G+  AG+++DA +L   M  H CV N VTYS 
Sbjct: 181 LNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSR 240

Query: 241 LLDGLCRVGSFERALELLAEMEKE--GGECTPNVITYTSVIQSLCENGKSMQALPILERM 300
           +L+G+C+ G  ERALELLAEMEKE  GG  +PN +TYT VIQ+ CE  +  +AL +L+RM
Sbjct: 241 ILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300

Query: 301 ESFKCHPNRITMSVLIQGLCGEGYIDKAF-KLVSNVVVGSHVPRGECYSSLVISLLRIKR 360
            +  C PNR+T  VLIQG+       KA  KL+  +V    V   EC+SS  +SL+R+KR
Sbjct: 301 GNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKR 360

Query: 361 FEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSDIY 420
           +EEA+K+F  ML   +RPDGLACS + ++LC   R++D F LY++IEKK    TIDSDI+
Sbjct: 361 WEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIH 420

Query: 421 SALLLGLCEKNREVEVAKLANFMVEKGIKINASYIDDIHKHLK 460
           + LLLGLC++    E AKLA  M++K +++  S+++ I + LK
Sbjct: 421 AVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALK 463

BLAST of Spo23542.1 vs. TAIR (Arabidopsis)
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 2.100e-43
Identity = 102/334 (30.54%), Postives = 171/334 (51.20%), Query Frame = 1

		  

Query: 116 ILERYLVEGCQTNAKLFKVVLN-LCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLF 175
           +++R +  G Q N   +  VLN +C+  + A   + +LRKM + + + D+  Y+++I   
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTA-LAMELLRKMEERNIKLDAVKYSIIIDGL 274

Query: 176 CDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNL 235
           C  G LD A  L  EME      D+ITY +++ GF  AGR +D  +L   M      PN+
Sbjct: 275 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 334

Query: 236 VTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPIL 295
           VT+S L+D   + G    A +LL EM + G    PN ITY S+I   C+  +  +A+ ++
Sbjct: 335 VTFSVLIDSFVKEGKLREADQLLKEMMQRG--IAPNTITYNSLIDGFCKENRLEEAIQMV 394

Query: 296 ERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRI 355
           + M S  C P+ +T ++LI G C    ID   +L   + +   +     Y++LV    + 
Sbjct: 395 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 454

Query: 356 KRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSD 415
            + E A KLF  M+   +RPD ++  +L+  LC  G    A  ++  IEK    + +D  
Sbjct: 455 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS--KMELDIG 514

Query: 416 IYSALLLGLCEKNREVEVAKLANFMVEKGIKINA 449
           IY  ++ G+C  ++  +   L   +  KG+K++A
Sbjct: 515 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543

BLAST of Spo23542.1 vs. TAIR (Arabidopsis)
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 168.7 bits (426), Expect = 8.900e-42
Identity = 92/334 (27.54%), Postives = 178/334 (53.29%), Query Frame = 1

		  

Query: 115 EILERYLVEGCQTNAKLFKVVLNL-CREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGL 174
           E+L+R L   C  +   + +++   CR++ +    + +L +M D  C PD   YNV++  
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVG-HAMKLLDEMRDRGCTPDVVTYNVLVNG 284

Query: 175 FCDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPN 234
            C +G LD A+  + +M S    P++IT+  +L+     GR  DA +L   M   G  P+
Sbjct: 285 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 344

Query: 235 LVTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPI 294
           +VT++ L++ LCR G   RA+++L +M + G  C PN ++Y  ++   C+  K  +A+  
Sbjct: 345 VVTFNILINFLCRKGLLGRAIDILEKMPQHG--CQPNSLSYNPLLHGFCKEKKMDRAIEY 404

Query: 295 LERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLR 354
           LERM S  C+P+ +T + ++  LC +G ++ A ++++ +      P    Y++++  L +
Sbjct: 405 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 464

Query: 355 IKRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDS 414
             +  +A KL   M   D++PD +  S L+  L  +G+  +A   + + E+ G  +  ++
Sbjct: 465 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG--IRPNA 524

Query: 415 DIYSALLLGLCEKNREVEVAKLANFMVEKGIKIN 448
             +++++LGLC+  +         FM+ +G K N
Sbjct: 525 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 553

BLAST of Spo23542.1 vs. TAIR (Arabidopsis)
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 4.400e-41
Identity = 100/331 (30.21%), Postives = 168/331 (50.76%), Query Frame = 1

		  

Query: 116 ILERYLVEGCQTNAKLFKVVLN-LCREARIADEGLWVLRKMGDFDCRPDSTMYNVVIGLF 175
           +++R +  G Q N   +  VL  +C+  + A   + +LRKM +   + D+  Y+++I   
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTA-LAMELLRKMEERKIKLDAVKYSIIIDGL 258

Query: 176 CDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMKVHGCVPNL 235
           C  G LD A  L  EME      D+I Y ++++GF YAGR +D  +L   M      P++
Sbjct: 259 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 318

Query: 236 VTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGKSMQALPIL 295
           V +SAL+D   + G    A EL  EM + G   +P+ +TYTS+I   C+  +  +A  +L
Sbjct: 319 VAFSALIDCFVKEGKLREAEELHKEMIQRG--ISPDTVTYTSLIDGFCKENQLDKANHML 378

Query: 296 ERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSSLVISLLRI 355
           + M S  C PN  T ++LI G C    ID   +L   + +   V     Y++L+     +
Sbjct: 379 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 438

Query: 356 KRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKGFVLTIDSD 415
            + E A +LF  M+   +RPD ++  +L+  LC  G    A  ++E IEK    + +D  
Sbjct: 439 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKS--KMELDIG 498

Query: 416 IYSALLLGLCEKNREVEVAKLANFMVEKGIK 446
           IY+ ++ G+C  ++  +   L   +  KG+K
Sbjct: 499 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524

BLAST of Spo23542.1 vs. TAIR (Arabidopsis)
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases)

HSP 1 Score: 164.5 bits (415), Expect = 1.700e-40
Identity = 97/341 (28.45%), Postives = 173/341 (50.73%), Query Frame = 1

		  

Query: 111 GRIRE---ILERYLVEGCQTNAKLFKVVLN-LCREARIADEGLWVLRKMGDFDCRPDSTM 170
           G++ E   +++R +  GCQ +   +  ++N +CR    +   L +LRKM + + + D   
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS-LALDLLRKMEERNVKADVFT 231

Query: 171 YNVVIGLFCDKGDLDMAMGLMREMESCNLCPDMITYMSMLKGFSYAGRLEDACQLFMTMK 230
           Y+ +I   C  G +D A+ L +EME+  +   ++TY S+++G   AG+  D   L   M 
Sbjct: 232 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 291

Query: 231 VHGCVPNLVTYSALLDGLCRVGSFERALELLAEMEKEGGECTPNVITYTSVIQSLCENGK 290
               VPN++T++ LLD   + G  + A EL  EM   G   +PN+ITY +++   C   +
Sbjct: 292 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYCMQNR 351

Query: 291 SMQALPILERMESFKCHPNRITMSVLIQGLCGEGYIDKAFKLVSNVVVGSHVPRGECYSS 350
             +A  +L+ M   KC P+ +T + LI+G C    +D   K+  N+     V     YS 
Sbjct: 352 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 411

Query: 351 LVISLLRIKRFEEADKLFMWMLGSDMRPDGLACSVLMKDLCFKGRFVDAFSLYEDIEKKG 410
           LV    +  + + A++LF  M+   + PD +   +L+  LC  G+   A  ++ED++K  
Sbjct: 412 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 471

Query: 411 FVLTIDSDIYSALLLGLCEKNREVEVAKLANFMVEKGIKIN 448
             L I   +Y+ ++ G+C+  +  +   L   +  KG+K N
Sbjct: 472 MDLGI--VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507

The following BLAST results are available for this feature:
BLAST of Spo23542.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902209324|gb|KNA16182.1|6.4e-27699.1hypothetical protein SOVF_0913... [more]
gi|731331620|ref|XP_010676754.1|7.5e-21677.8PREDICTED: pentatricopeptide r... [more]
gi|567895518|ref|XP_006440247.1|1.3e-14654.5hypothetical protein CICLE_v10... [more]
gi|590676512|ref|XP_007039757.1|1.3e-14654.4Tetratricopeptide repeat-like ... [more]
gi|568846594|ref|XP_006477135.1|1.8e-14554.2PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo23542.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RBN6_SPIOL4.5e-27699.1Uncharacterized protein OS=Spi... [more]
A0A0J8F8W0_BETVU5.2e-21677.8Uncharacterized protein OS=Bet... [more]
V4T030_9ROSI8.8e-14754.5Uncharacterized protein OS=Cit... [more]
A0A061G4E0_THECC8.8e-14754.4Tetratricopeptide repeat-like ... [more]
A0A067FDR3_CITSI1.3e-14554.2Uncharacterized protein OS=Cit... [more]
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BLAST of Spo23542.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP422_ARATH1.0e-11146.2Pentatricopeptide repeat-conta... [more]
PPR39_ARATH3.8e-4230.5Pentatricopeptide repeat-conta... [more]
PPR28_ARATH1.6e-4027.5Pentatricopeptide repeat-conta... [more]
PPR37_ARATH7.9e-4030.2Pentatricopeptide repeat-conta... [more]
PPR38_ARATH3.0e-3928.4Putative pentatricopeptide rep... [more]
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BLAST of Spo23542.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G47360.15.7e-11346.2Tetratricopeptide repeat (TPR)... [more]
AT1G12775.12.1e-4330.5Pentatricopeptide repeat (PPR)... [more]
AT1G09900.18.9e-4227.5Pentatricopeptide repeat (PPR-... [more]
AT1G12620.14.4e-4130.2Pentatricopeptide repeat (PPR)... [more]
AT1G12700.11.7e-4028.4ATP binding;nucleic acid bindi... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 379..407
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 159..191
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 269..317
score: 2.6E-13coord: 197..246
score: 1.6
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 272..305
score: 3.0E-5coord: 166..198
score: 1.0E-5coord: 235..266
score: 2.8E-8coord: 200..233
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 198..232
score: 11.937coord: 305..339
score: 8.374coord: 270..304
score: 10.928coord: 163..197
score: 11.192coord: 128..162
score: 7.673coord: 412..446
score: 8.484coord: 340..374
score: 8.67coord: 233..267
score: 12.079coord: 375..409
score: 8
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..55
score: 3.7E-178coord: 71..483
score: 3.7E
NoneNo IPR availablePANTHERPTHR24015:SF719SUBFAMILY NOT NAMEDcoord: 1..55
score: 3.7E-178coord: 71..483
score: 3.7E