Spo23558.1 (mRNA) | SpinachBase

Overview


Name	Spo23558.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	GrpE protein homolog
Location	chr2 : 51463035 .. 51467932 (+)
Sequence length	1697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATATACCTAATAATTTTCAGGACCTAAAATGGTACAAGTACAAGTAAAACCATTTGTGTCATTGGGTTGGATGATTTGGATTTTAGATCCATTCCTCCCACTCTCCCATAATACTCCCAAACGCAATTCCATACAAGAACATCCTTCTAGAACTCTCTTTGCCTTCTAATTCTCCCCCTCTCCACCTGCAGTTTCAATTTCAGTTTCAAATACCCAAATCAATCTTCATTTTCTCAATTTCAATCAAAAAAATTAGATAAAAAATGGCTATTTCTCTCTCAAACACAAGCACTTCATTTTTGTGCGCCCCATTTTCAGTTTCAGGTGTCAAACGACCTTCAAAATCCCACAAACCCCTAACCTTACCTGTTCAATCTTCTCCCAGAAATAAGAATCTAAATCTCGCAACAAATTCTCTCTCATCTTCTCTTCTTCTCCAAAACCGCCATTGTTATGATGATTTCAGGTGCTGTTTCTCCTTTCAGGAAGAACAAGACTCTACTACCACTGTAAGCTTCTTTGTTTTTCTCTTTTAATCTGTTTTTCCTTCTGGGTTTTTGTTTAATTTGTTCATAAAGTTGCAAACCTTGCTGGGTTTGAGTTAGATTTACTTAATTTTTGACATTTCTGTGAATTTTGATTGAACATGTAATGTCACTCACTCCTGCTGATGCATTATGCTAAATAATTGTTGATTTTGAATACAACATACAGTTTGGGATTAATGGAACAATTGGCATTTGATTTTGAATACAACATACAGTTTGGGAGTAATGGAACAATTAGCATTTAGAATCTACTGGAAATTTGATACTGAGGGGCAAATTATTTGGATGTATTTCATTGGTAATTAGTATTCATTTCTTATGATTTGAATTCTTTTGGGTTTTTTTTTTCAGTTTGTTCATAAAGTGAGCAAAATTTGCTGGGTTTGAGTTAAATTTGCTTAATTCCTGACATTTTTTGTGAATTTTGATTGAACTTGTAGTGCCACTCACTGCTGTTGATGTGTCTATTCTAAATTTCTCTGTAACAATGTTTGATTTTGAATATAACATACAATTATTATTTGAATTTAGAATCTACTGGAAATTTGAAGTCTCCAAATCTATTGGTAATTGGTATTCATTTCTTATGATTTGAATTCTTTTTACTGGTGATTTTAGATGGATGAGGAAATGCTAGAGGAGGAAGTCGGGGAAACAGAAGAAGAGACAAGTACCAAGAATATGTGGGAAAGTGTGGAAACTCTCACTAAATATTATAAGGAGGCTGTTTTAGCTGGGGATTATCAGACCATTACGGAAATAGAGACCGCCTTTTACCGACTAGAAACAGAAAAGAACGAGTTGGTTGAGAAATTATCAACTTTGACAGAAGAGATAACTTCTGGAAAGGATAGATTTATCCGCCTGCAAGCTGACTTTGATAACTTTAGAAGGAGATCAGATAAAGAGAGACTATCAGTTCGAAGCGATGCACAGGGAGAAGTAATTGAGAGTCTTCTTCCAATGGTGGACAATTTTGAGAGGGCGAAGCAACAGTTAAAACCAGAAACGGATAAGGAAAAACAAATTGATACAAGTTATCAGGGCATATACAAGCAGTTTGTAGAGATCATGAGGAGTTTGCGCGTAGCTGTTGTAGCTACCGTAGGGAAGCCTTTTGATCCATCGGTAAGTCTTATATCTTGACTGATCATTATTCGTTAGTCACCAACTTTATTATTTTACTATGCCTTTGTTCTGATTTATGGTGATGTGCTCTTGGTGATGTGCTCTTGATCAATTTTATAGCATTTGATTTATGTTATCTAAACCTGCAAATTCTTTAAGATAATTGTGGCTGCATAGAACTCCTTTTAAGTCATATGTATGGTGATGTGCTCTTGATGACTTTATAGCATTTGATTTATATTCTCTAAACCTGCAAATTCATTAGGATAATTGTGACTGCATAGAACTCCTTTTAAGTCATACGTAGTGTTTGCTGAAATTGTTGGATTTAAGTATTTAACCACCAATATATCTTATCACTATTTGAAGCCGTATTCTTGTTAGAAGCTTATCACCCTAAAGCATGCTTAAGATTGGCCGTGATTGTGAAATTGGCAAGTTTAGTTTTGCACTTTCGCATACTGTTGCATCTTTGTGATCAATATCGGAACTTCTGTTACTTTATCTTCTTTTTCTTTTGCATTTTGTGCTTTGGGTTTTTATCAAGAGATCTTCATAGAGCTATTCAGCACAAGAGTACTAGTGCCAATCGATTCCAGCATGTGTTTCCTTCCACCCTATGCTTACTGCTTATTTCCCACGTGTTACTTTAAGCGGTTTCATAAAGTGAGTAAACTAATTGATTAATTGAAACTTAGGAAACTAATTGATCGTGGCCTGCATAGTAGTCCACTAATAACCCACTAACTCAACTAAACAATTAAACCGACTTCCTAGTTCCTAATAACTTGCCACTAACTAATTTACTTGACAAGTAACATGTGTCCCTAAACTTTAGGAACACTTTGGAGGACCAGTTCCAACAATGGTTGAGGTAGCTAGTGCCCCTTGTATGGAGCTGTAGAGTGAGAATCATCTTGCCCGCTCATGTAGTGTAATACGTGTCCAGATGGCAGCTTAGTTACGATTCATATCATGGCCGTTGAGGCAGAAACATGGACTGTGTTGAAACTAGATCCTCCATGCAGGGCAAAGCAATTCCTTTATTGATGATTTACTTTTACAAGAATTCCAGTTATAAATAAAAGGCTACCCAAATGGTCATTTCTCATTGGCTGTTGGGTCCATTTGTTCCTTTATAGTTTATCCTCGGGGGCACACGGAGATTTCAACCATAGTAACCACATCCACGGTATCACTTGTCAGAAGATTCTCTGGTTTTGGGGACTATAACAGTATGGTTTGGCGGAAGGGATATTTGATACCACTGGAGTAATGTATTAAGGGATAATAAAAGTCAAACTAAAAAAATATAAGGTAATGGGATGGAATTGTGGGAAAGAGAATAAGTTAGTGTTGGTAAGAAGAAAAGAAAAGGAAAGGGGAAAAGTGACCATTCTTATGGGGGTAATAGTTGCCCACCATCCAAGTAGGGTGATTATTACTCTCATTTGTGGGGTAATAGCTTCCCCCTTCCTCCCTTCTCCTCAAAACACCACCACTTCTCATCATAATACCACCACACAACCCTCCTACAACCACCTCAATTCACCTTTATTTTTTTTCATTAAGGTGGTTTGACTTTTATTACCCTTTTAATCCATTATACCCAATCCATTACCCCCTTAATCCATTACACCCAATCCAAGCATGCCTCTTAAGTAGAAACTCAGGACAATACATGCCTTTGGAAGTTGACCAACTAACATAGGCCAGTATCAAGGGTTAAAAAGTTTTGGGTAGGTATAAAAAACTTACAGATTCGCTGAAGTTTAATATTTTGCCGGTGCCTTGATCTGCAATGATCTAAACTCAACCGCTTTCTTTGGGTAGGATTTAAAATTTTCTGGTGCATTGGATAGAATAATCACATCCAGTTGGTGTTCTGTTGAAAAAACAAGGCATGATTTTGTAATTTCTTTTGCGTTAGATAGGTTGAGACTTTGATTTCCACTACCGCTGAGTAAATGATTGTTTAGCTACATGGATATTAGCAATGTTACCTAATTCCCTAATCGCCCCACGAAACCGAGAACCGAAAAAGCGAACTACAACTTGAAACTAGTATATTTTTGGTTTTATTTAGCAAATTAGATAGCGAATTAAGAAACCCGTACCCAATCTCATACTAGCGAATCAGGTAACAATGAATATTGGCAGTAATGCTATGGAAGTTTGTATTTTATTTTTGTGTCGTGGCTCTGATATTAGTGATATCCAATATTAGTGTTTGATTGGAGCAACTTGAAATACAGGGGTACAACGTAGAAAAATCCAAAACTTAAAGAGTTGCTGAAGTTAACATTTTGCCGGTGCCTTGATCCGCAGTGATCTAAACTCACTGTTTTCTTTGGATAGGAATTTAAAATTTCCTGATTTTGTAGTTAAGACTCTGATTTCCACGACTGCTTGGTAAATTAATCGCTTACTTACATGGATATTACTATATTAGCAGTAATTCTATGGAAGTTTGTATTTTATTTAGTGATACCCATTATTAGTGTTTGATTGGAGCAACCTTGAACTTTTATTTTCTTGATGTAGCTGCACGAGGCCATTGCTAGAGAGGAGTCTGAAGAGTTCAAAGAAGGAATTGTAACTCAAGAATACAGACGTGGGTTTCTTCTTGGTGATCGACTTCTGAGACCAGCAATGGTGAAAGTTTCTTCAGGTCCTGGTAAGAAGAAGAAAGATGATGCAGCGGCTACTCAGATATCACCAGAGCAACCGGCTGCAGCTGCTGCTGTGGATGGACATTGATGCACAATGCTGCATTTTTGTTGAATGTGAAAAACTTTTGCTTCTTTTAGGTACCATCTCTTAATATTTATAAAACCCTAATGATTTATTGGTCGATATTGTACATTAGGCTTTCTTGGCATCCATCCTTACTAGACCTGTCAAACGGGTCGGTCGGGTCGGGTTGTAAAAATTATTTTCGGGGTTCGAATTAATCCAGGTCGGTCACTTTTGGATTTGGGTTTACAAATGCTTTTAAGACCCAGAACTTTCGGGTTCGGGTCGACTAACAGGTTTAGAGATTTTAAAACGCGTATTATATCTTCCTGGTGCATTGGATAGAATAATCACATTCAGTTGATGCAGCTACGTACTTTTGCTTCTTTTAGATACCATCTCAGGAATTTTTATAAAACCCTAATGATTTGTTGGTCGATATTGTAATTTTTACATCACCTGTTTTAGGATTCTTAGCATCCAT

mRNA sequence

GAATATACCTAATAATTTTCAGGACCTAAAATGGTACAAGTACAAGTAAAACCATTTGTGTCATTGGGTTGGATGATTTGGATTTTAGATCCATTCCTCCCACTCTCCCATAATACTCCCAAACGCAATTCCATACAAGAACATCCTTCTAGAACTCTCTTTGCCTTCTAATTCTCCCCCTCTCCACCTGCAGTTTCAATTTCAGTTTCAAATACCCAAATCAATCTTCATTTTCTCAATTTCAATCAAAAAAATTAGATAAAAAATGGCTATTTCTCTCTCAAACACAAGCACTTCATTTTTGTGCGCCCCATTTTCAGTTTCAGGTGTCAAACGACCTTCAAAATCCCACAAACCCCTAACCTTACCTGTTCAATCTTCTCCCAGAAATAAGAATCTAAATCTCGCAACAAATTCTCTCTCATCTTCTCTTCTTCTCCAAAACCGCCATTGTTATGATGATTTCAGGTGCTGTTTCTCCTTTCAGGAAGAACAAGACTCTACTACCACTATGGATGAGGAAATGCTAGAGGAGGAAGTCGGGGAAACAGAAGAAGAGACAAGTACCAAGAATATGTGGGAAAGTGTGGAAACTCTCACTAAATATTATAAGGAGGCTGTTTTAGCTGGGGATTATCAGACCATTACGGAAATAGAGACCGCCTTTTACCGACTAGAAACAGAAAAGAACGAGTTGGTTGAGAAATTATCAACTTTGACAGAAGAGATAACTTCTGGAAAGGATAGATTTATCCGCCTGCAAGCTGACTTTGATAACTTTAGAAGGAGATCAGATAAAGAGAGACTATCAGTTCGAAGCGATGCACAGGGAGAAGTAATTGAGAGTCTTCTTCCAATGGTGGACAATTTTGAGAGGGCGAAGCAACAGTTAAAACCAGAAACGGATAAGGAAAAACAAATTGATACAAGTTATCAGGGCATATACAAGCAGTTTGTAGAGATCATGAGGAGTTTGCGCGTAGCTGTTGTAGCTACCGTAGGGAAGCCTTTTGATCCATCGCTGCACGAGGCCATTGCTAGAGAGGAGTCTGAAGAGTTCAAAGAAGGAATTGTAACTCAAGAATACAGACGTGGGTTTCTTCTTGGTGATCGACTTCTGAGACCAGCAATGGTGAAAGTTTCTTCAGGTCCTGGTAAGAAGAAGAAAGATGATGCAGCGGCTACTCAGATATCACCAGAGCAACCGGCTGCAGCTGCTGCTGTGGATGGACATTGATGCACAATGCTGCATTTTTGTTGAATGTGAAAAACTTTTGCTTCTTTTAGGTACCATCTCTTAATATTTATAAAACCCTAATGATTTATTGGTCGATATTGTACATTAGGCTTTCTTGGCATCCATCCTTACTAGACCTGTCAAACGGGTCGGTCGGGTCGGGTTGTAAAAATTATTTTCGGGGTTCGAATTAATCCAGGTCGGTCACTTTTGGATTTGGGTTTACAAATGCTTTTAAGACCCAGAACTTTCGGGTTCGGGTCGACTAACAGGTTTAGAGATTTTAAAACGCGTATTATATCTTCCTGGTGCATTGGATAGAATAATCACATTCAGTTGATGCAGCTACGTACTTTTGCTTCTTTTAGATACCATCTCAGGAATTTTTATAAAACCCTAATGATTTGTTGGTCGATATTGTAATTTTTACATCACCTGTTTTAGGATTCTTAGCATCCAT

Coding sequence (CDS)

ATGGCTATTTCTCTCTCAAACACAAGCACTTCATTTTTGTGCGCCCCATTTTCAGTTTCAGGTGTCAAACGACCTTCAAAATCCCACAAACCCCTAACCTTACCTGTTCAATCTTCTCCCAGAAATAAGAATCTAAATCTCGCAACAAATTCTCTCTCATCTTCTCTTCTTCTCCAAAACCGCCATTGTTATGATGATTTCAGGTGCTGTTTCTCCTTTCAGGAAGAACAAGACTCTACTACCACTATGGATGAGGAAATGCTAGAGGAGGAAGTCGGGGAAACAGAAGAAGAGACAAGTACCAAGAATATGTGGGAAAGTGTGGAAACTCTCACTAAATATTATAAGGAGGCTGTTTTAGCTGGGGATTATCAGACCATTACGGAAATAGAGACCGCCTTTTACCGACTAGAAACAGAAAAGAACGAGTTGGTTGAGAAATTATCAACTTTGACAGAAGAGATAACTTCTGGAAAGGATAGATTTATCCGCCTGCAAGCTGACTTTGATAACTTTAGAAGGAGATCAGATAAAGAGAGACTATCAGTTCGAAGCGATGCACAGGGAGAAGTAATTGAGAGTCTTCTTCCAATGGTGGACAATTTTGAGAGGGCGAAGCAACAGTTAAAACCAGAAACGGATAAGGAAAAACAAATTGATACAAGTTATCAGGGCATATACAAGCAGTTTGTAGAGATCATGAGGAGTTTGCGCGTAGCTGTTGTAGCTACCGTAGGGAAGCCTTTTGATCCATCGCTGCACGAGGCCATTGCTAGAGAGGAGTCTGAAGAGTTCAAAGAAGGAATTGTAACTCAAGAATACAGACGTGGGTTTCTTCTTGGTGATCGACTTCTGAGACCAGCAATGGTGAAAGTTTCTTCAGGTCCTGGTAAGAAGAAGAAAGATGATGCAGCGGCTACTCAGATATCACCAGAGCAACCGGCTGCAGCTGCTGCTGTGGATGGACATTGA

Protein sequence

MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQNRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVLAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKKKDDAAATQISPEQPAAAAAVDGH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23558	Spo23558	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23558.1	Spo23558.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23558.1.exon.1	Spo23558.1.exon.1	exon
Spo23558.1.exon.2	Spo23558.1.exon.2	exon
Spo23558.1.exon.3	Spo23558.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23558.1.utr5p.1	Spo23558.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23558.1.CDS.1	Spo23558.1.CDS.1	CDS
Spo23558.1.CDS.2	Spo23558.1.CDS.2	CDS
Spo23558.1.CDS.3	Spo23558.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23558.1.utr3p.1	Spo23558.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo23558.1 vs. NCBI nr
Match: gi|902195589|gb|KNA12889.1| (hypothetical protein SOVF_121270 [Spinacia oleracea])

HSP 1 Score: 561.2 bits (1445), Expect = 1.200e-156
Identity = 303/323 (93.81%), Postives = 304/323 (94.12%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQN 60
           MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQN
Sbjct: 1   MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQN 60

Query: 61  RHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVL 120
           RHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVL
Sbjct: 61  RHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVL 120

Query: 121 AGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKER 180
           AGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRS KER
Sbjct: 121 AGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSGKER 180

Query: 181 LSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVA 240
           LSVRSDAQGE                  LKPETDKEKQIDTSYQGIYKQFVEIMRSLRVA
Sbjct: 181 LSVRSDAQGE------------------LKPETDKEKQIDTSYQGIYKQFVEIMRSLRVA 240

Query: 241 VVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKK 300
           VVATVGKPFDPSLHEAIAREESEEFKEGIVTQE+RRGFLLGDRLLRPAMVKVSSGPGKKK
Sbjct: 241 VVATVGKPFDPSLHEAIAREESEEFKEGIVTQEFRRGFLLGDRLLRPAMVKVSSGPGKKK 300

Query: 301 KDDAAATQISPEQPAAAAAVDGH 324
           KDDAAATQISPEQPAAAAAVDGH
Sbjct: 301 KDDAAATQISPEQPAAAAAVDGH 305

[Close]

BLAST of Spo23558.1 vs. NCBI nr
Match: gi|731310710|ref|XP_010672791.1| (PREDICTED: grpE protein homolog, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 408.3 bits (1048), Expect = 1.300e-110
Identity = 240/327 (73.39%), Postives = 266/327 (81.35%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNL----NLATNSLSSSL 60
           MA+SLS+T   FLCA FS    K+ SKS K LT  +QSS +N       +L   SLSS L
Sbjct: 1   MAVSLSSTPP-FLCASFS--STKQLSKSPK-LTFFIQSSSKNHQFLSLSSLLPFSLSSPL 60

Query: 61  LLQNRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYK 120
           L QN H   DF  CF+ QE  DS+  MDEE  +EE GETEE T    +WESVETLT++YK
Sbjct: 61  LPQNGHGGRDFSYCFASQE--DSSIIMDEETQDEEDGETEE-TGANKVWESVETLTRFYK 120

Query: 121 EAVLAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRS 180
           EAVLAGDYQTITEIET FYRLETEKN+LVEKL+T+ EEITSGKDR IRLQADFDNFR+RS
Sbjct: 121 EAVLAGDYQTITEIETVFYRLETEKNDLVEKLATMKEEITSGKDRHIRLQADFDNFRKRS 180

Query: 181 DKERLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRS 240
           +KERLSVRSDAQGEVIES L MVD+FERAKQQ+KPETD+EKQIDTSYQGIYKQFVEIMRS
Sbjct: 181 EKERLSVRSDAQGEVIESFLSMVDSFERAKQQIKPETDREKQIDTSYQGIYKQFVEIMRS 240

Query: 241 LRVAVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGP 300
           LRVA +ATVGKPFDPSLHEAIAREES+EFKEGI+ QE+RRGFLLGDRLLRPA VKVSSGP
Sbjct: 241 LRVASIATVGKPFDPSLHEAIAREESDEFKEGIIIQEFRRGFLLGDRLLRPATVKVSSGP 300

Query: 301 GKKKKDDAAATQISPEQPAAAAAVDGH 324
           GKKK  ++AATQ S EQP AAA  D H
Sbjct: 301 GKKK--ESAATQTSSEQPVAAATADEH 318

[Close]

BLAST of Spo23558.1 vs. NCBI nr
Match: gi|255545570|ref|XP_002513845.1| (PREDICTED: protein GrpE [Ricinus communis])

HSP 1 Score: 295.8 bits (756), Expect = 9.100e-77
Identity = 180/325 (55.38%), Postives = 232/325 (71.38%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAP--FSVSGVKRPSKS--HKPLTLPVQSSPRNKNLNLATNSLSSSL 60
           MA+S SN S   L AP   S S   +P K+   K + LP+Q    +  L+L+ +++S+S 
Sbjct: 1   MAVSFSNHS---LLAPPRLSPSFSAKPPKTLETKSILLPLQF--HHSKLHLSNSTISNSS 60

Query: 61  LLQNRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYK 120
            + N H        +   ++    T  +E   + +    +++T  K++  S+  L   YK
Sbjct: 61  PVTNNHIERRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHL-PSLTKLINIYK 120

Query: 121 EAVLAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRS 180
           EA+L GD +T+T+IE     +E    ELV+K+S L+ EITSGK+++IRLQADFDNFR+RS
Sbjct: 121 EAILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKRS 180

Query: 181 DKERLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRS 240
           +KER ++RSDAQGEVIESLLPMVD+FERAKQQ+KPET+ EK+IDTSYQGIYKQFVEIMRS
Sbjct: 181 EKERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMRS 240

Query: 241 LRVAVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGP 300
           L+VAVVATVGKPFDPSLHEAIAREES+E+KEGI+ QE+RRGFLLG RLLRPAMVKVS+GP
Sbjct: 241 LQVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAGP 300

Query: 301 GKKKKDDAAATQISPEQPAAAAAVD 322
           G+KK        +  EQPA AA VD
Sbjct: 301 GRKK------APVGAEQPATAAGVD 313

[Close]

BLAST of Spo23558.1 vs. NCBI nr
Match: gi|802634724|ref|XP_012078137.1| (PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas])

HSP 1 Score: 294.7 bits (753), Expect = 2.000e-76
Identity = 187/322 (58.07%), Postives = 227/322 (70.50%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAP-FSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQ 60
           MA+S S ++ S L  P FS S   +P K+ +  TL    S R  N     +S      +Q
Sbjct: 1   MAVS-SFSNLSLLAPPRFSASFSAKPPKTLETKTLLTLQSLRLCNSIKGFHSSPLRNDVQ 60

Query: 61  NRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAV 120
            R     F+  FS   E  + TT D+E   +   +  E+ +       +E L   YK AV
Sbjct: 61  GR----SFKAYFS--AEDYAPTTKDKEENHQNGMKASEKAADGKTVVGLENLIDIYKAAV 120

Query: 121 LAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKE 180
           L GD +TI +IE     +E+E  ELV+++S L+ EI SGK+++IRLQADFDNFR+RS+KE
Sbjct: 121 LHGDERTIADIEARIKIIESENYELVQRVSALSAEIASGKEKYIRLQADFDNFRKRSEKE 180

Query: 181 RLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRV 240
           RL+VRSDAQGEVIESLLPMVDNFERAKQQLKPET+KEK+IDTSYQGIYKQFVEIMRSL+V
Sbjct: 181 RLNVRSDAQGEVIESLLPMVDNFERAKQQLKPETEKEKKIDTSYQGIYKQFVEIMRSLQV 240

Query: 241 AVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKK 300
           AVVATVGKPFDPSLHEAIAREES+E++EGI+ QE+RRGFLLGDRLLRPAMVKVSSGPG+K
Sbjct: 241 AVVATVGKPFDPSLHEAIAREESQEYEEGIIIQEFRRGFLLGDRLLRPAMVKVSSGPGRK 300

Query: 301 KKDDAAATQISPEQPAAAAAVD 322
           K        I+ EQ A AA VD
Sbjct: 301 K------APINAEQSATAAGVD 309

[Close]

BLAST of Spo23558.1 vs. NCBI nr
Match: gi|225459431|ref|XP_002285824.1| (PREDICTED: grpE protein homolog, mitochondrial [Vitis vinifera])

HSP 1 Score: 293.9 bits (751), Expect = 3.400e-76
Identity = 164/247 (66.40%), Postives = 199/247 (80.57%), Query Frame = 1


		  
Query: 77  QDST--TTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVLAGDYQTITEIETAF 136
           QDST  T  +EE    +V  ++ E   K +   +++L K YK+AVL GD + ++EIE   
Sbjct: 53  QDSTPYTNNEEEGSRYDVKTSKSEADQKPL-SVLKSLIKAYKDAVLDGDEKAVSEIEAMI 112

Query: 137 YRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIES 196
             +E+EK EL +K+S L+ EITSGK+++IRLQADFDNFR+RS+KERL+VR+DAQGEV+ES
Sbjct: 113 DTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRTDAQGEVVES 172

Query: 197 LLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLH 256
           LLPM+DNFERAKQQ+KPET+KEK+IDTSYQGIYKQFVEIMRS  VA VATVGKPFDP+LH
Sbjct: 173 LLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATVGKPFDPALH 232

Query: 257 EAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKKKDDAAATQISPEQP 316
           EAIAREES+EFKEGI+ QE RRGFLLGDRLLRPAMVKVS+GPG+KK   +A    S  QP
Sbjct: 233 EAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKK--TSAVADKSTGQP 292

Query: 317 AAAAAVD 322
           A AA VD
Sbjct: 293 ATAAGVD 296

[Close]

BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1S8_SPIOL (GrpE protein homolog OS=Spinacia oleracea GN=SOVF_121270 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 8.100e-157
Identity = 303/323 (93.81%), Postives = 304/323 (94.12%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQN 60
           MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQN
Sbjct: 1   MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQN 60

Query: 61  RHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVL 120
           RHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVL
Sbjct: 61  RHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVL 120

Query: 121 AGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKER 180
           AGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRS KER
Sbjct: 121 AGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSGKER 180

Query: 181 LSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVA 240
           LSVRSDAQGE                  LKPETDKEKQIDTSYQGIYKQFVEIMRSLRVA
Sbjct: 181 LSVRSDAQGE------------------LKPETDKEKQIDTSYQGIYKQFVEIMRSLRVA 240

Query: 241 VVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKK 300
           VVATVGKPFDPSLHEAIAREESEEFKEGIVTQE+RRGFLLGDRLLRPAMVKVSSGPGKKK
Sbjct: 241 VVATVGKPFDPSLHEAIAREESEEFKEGIVTQEFRRGFLLGDRLLRPAMVKVSSGPGKKK 300

Query: 301 KDDAAATQISPEQPAAAAAVDGH 324
           KDDAAATQISPEQPAAAAAVDGH
Sbjct: 301 KDDAAATQISPEQPAAAAAVDGH 305

[Close]

BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D2Q2_BETVU (GrpE protein homolog OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000510 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 8.700e-111
Identity = 240/327 (73.39%), Postives = 266/327 (81.35%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAPFSVSGVKRPSKSHKPLTLPVQSSPRNKNL----NLATNSLSSSL 60
           MA+SLS+T   FLCA FS    K+ SKS K LT  +QSS +N       +L   SLSS L
Sbjct: 1   MAVSLSSTPP-FLCASFS--STKQLSKSPK-LTFFIQSSSKNHQFLSLSSLLPFSLSSPL 60

Query: 61  LLQNRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYK 120
           L QN H   DF  CF+ QE  DS+  MDEE  +EE GETEE T    +WESVETLT++YK
Sbjct: 61  LPQNGHGGRDFSYCFASQE--DSSIIMDEETQDEEDGETEE-TGANKVWESVETLTRFYK 120

Query: 121 EAVLAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRS 180
           EAVLAGDYQTITEIET FYRLETEKN+LVEKL+T+ EEITSGKDR IRLQADFDNFR+RS
Sbjct: 121 EAVLAGDYQTITEIETVFYRLETEKNDLVEKLATMKEEITSGKDRHIRLQADFDNFRKRS 180

Query: 181 DKERLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRS 240
           +KERLSVRSDAQGEVIES L MVD+FERAKQQ+KPETD+EKQIDTSYQGIYKQFVEIMRS
Sbjct: 181 EKERLSVRSDAQGEVIESFLSMVDSFERAKQQIKPETDREKQIDTSYQGIYKQFVEIMRS 240

Query: 241 LRVAVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGP 300
           LRVA +ATVGKPFDPSLHEAIAREES+EFKEGI+ QE+RRGFLLGDRLLRPA VKVSSGP
Sbjct: 241 LRVASIATVGKPFDPSLHEAIAREESDEFKEGIIIQEFRRGFLLGDRLLRPATVKVSSGP 300

Query: 301 GKKKKDDAAATQISPEQPAAAAAVDGH 324
           GKKK  ++AATQ S EQP AAA  D H
Sbjct: 301 GKKK--ESAATQTSSEQPVAAATADEH 318

[Close]

BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
Match: B9RJC6_RICCO (GrpE protein homolog OS=Ricinus communis GN=RCOM_1033170 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 6.300e-77
Identity = 180/325 (55.38%), Postives = 232/325 (71.38%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAP--FSVSGVKRPSKS--HKPLTLPVQSSPRNKNLNLATNSLSSSL 60
           MA+S SN S   L AP   S S   +P K+   K + LP+Q    +  L+L+ +++S+S 
Sbjct: 1   MAVSFSNHS---LLAPPRLSPSFSAKPPKTLETKSILLPLQF--HHSKLHLSNSTISNSS 60

Query: 61  LLQNRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYK 120
            + N H        +   ++    T  +E   + +    +++T  K++  S+  L   YK
Sbjct: 61  PVTNNHIERRSFKAYLATDDSSPDTNNEEGSDQNDKKALQKQTDAKHL-PSLTKLINIYK 120

Query: 121 EAVLAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRS 180
           EA+L GD +T+T+IE     +E    ELV+K+S L+ EITSGK+++IRLQADFDNFR+RS
Sbjct: 121 EAILLGDERTVTDIEARIKIIENTNYELVQKVSDLSTEITSGKEKYIRLQADFDNFRKRS 180

Query: 181 DKERLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRS 240
           +KER ++RSDAQGEVIESLLPMVD+FERAKQQ+KPET+ EK+IDTSYQGIYKQFVEIMRS
Sbjct: 181 EKERHTIRSDAQGEVIESLLPMVDSFERAKQQIKPETEMEKKIDTSYQGIYKQFVEIMRS 240

Query: 241 LRVAVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGP 300
           L+VAVVATVGKPFDPSLHEAIAREES+E+KEGI+ QE+RRGFLLG RLLRPAMVKVS+GP
Sbjct: 241 LQVAVVATVGKPFDPSLHEAIAREESQEYKEGIIIQEFRRGFLLGGRLLRPAMVKVSAGP 300

Query: 301 GKKKKDDAAATQISPEQPAAAAAVD 322
           G+KK        +  EQPA AA VD
Sbjct: 301 GRKK------APVGAEQPATAAGVD 313

[Close]

BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
Match: A0A067K9H6_JATCU (GrpE protein homolog OS=Jatropha curcas GN=JCGZ_12024 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.400e-76
Identity = 187/322 (58.07%), Postives = 227/322 (70.50%), Query Frame = 1


		  
Query: 1   MAISLSNTSTSFLCAP-FSVSGVKRPSKSHKPLTLPVQSSPRNKNLNLATNSLSSSLLLQ 60
           MA+S S ++ S L  P FS S   +P K+ +  TL    S R  N     +S      +Q
Sbjct: 1   MAVS-SFSNLSLLAPPRFSASFSAKPPKTLETKTLLTLQSLRLCNSIKGFHSSPLRNDVQ 60

Query: 61  NRHCYDDFRCCFSFQEEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAV 120
            R     F+  FS   E  + TT D+E   +   +  E+ +       +E L   YK AV
Sbjct: 61  GR----SFKAYFS--AEDYAPTTKDKEENHQNGMKASEKAADGKTVVGLENLIDIYKAAV 120

Query: 121 LAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKE 180
           L GD +TI +IE     +E+E  ELV+++S L+ EI SGK+++IRLQADFDNFR+RS+KE
Sbjct: 121 LHGDERTIADIEARIKIIESENYELVQRVSALSAEIASGKEKYIRLQADFDNFRKRSEKE 180

Query: 181 RLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRV 240
           RL+VRSDAQGEVIESLLPMVDNFERAKQQLKPET+KEK+IDTSYQGIYKQFVEIMRSL+V
Sbjct: 181 RLNVRSDAQGEVIESLLPMVDNFERAKQQLKPETEKEKKIDTSYQGIYKQFVEIMRSLQV 240

Query: 241 AVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKK 300
           AVVATVGKPFDPSLHEAIAREES+E++EGI+ QE+RRGFLLGDRLLRPAMVKVSSGPG+K
Sbjct: 241 AVVATVGKPFDPSLHEAIAREESQEYEEGIIIQEFRRGFLLGDRLLRPAMVKVSSGPGRK 300

Query: 301 KKDDAAATQISPEQPAAAAAVD 322
           K        I+ EQ A AA VD
Sbjct: 301 K------APINAEQSATAAGVD 309

[Close]

BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
Match: E0CRD7_VITVI (GrpE protein homolog OS=Vitis vinifera GN=VIT_18s0001g04190 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.400e-76
Identity = 164/247 (66.40%), Postives = 199/247 (80.57%), Query Frame = 1


		  
Query: 77  QDST--TTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVLAGDYQTITEIETAF 136
           QDST  T  +EE    +V  ++ E   K +   +++L K YK+AVL GD + ++EIE   
Sbjct: 53  QDSTPYTNNEEEGSRYDVKTSKSEADQKPL-SVLKSLIKAYKDAVLDGDEKAVSEIEAMI 112

Query: 137 YRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIES 196
             +E+EK EL +K+S L+ EITSGK+++IRLQADFDNFR+RS+KERL+VR+DAQGEV+ES
Sbjct: 113 DTIESEKAELAQKVSALSAEITSGKEKYIRLQADFDNFRKRSEKERLTVRTDAQGEVVES 172

Query: 197 LLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLH 256
           LLPM+DNFERAKQQ+KPET+KEK+IDTSYQGIYKQFVEIMRS  VA VATVGKPFDP+LH
Sbjct: 173 LLPMIDNFERAKQQIKPETEKEKKIDTSYQGIYKQFVEIMRSCHVAAVATVGKPFDPALH 232

Query: 257 EAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKKKDDAAATQISPEQP 316
           EAIAREES+EFKEGI+ QE RRGFLLGDRLLRPAMVKVS+GPG+KK   +A    S  QP
Sbjct: 233 EAIAREESQEFKEGIIIQEIRRGFLLGDRLLRPAMVKVSTGPGRKK--TSAVADKSTGQP 292

Query: 317 AAAAAVD 322
           A AA VD
Sbjct: 293 ATAAGVD 296

[Close]

BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
Match: GRPE_PROM0 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9301) GN=grpE PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.300e-34
Identity = 74/176 (42.05%), Postives = 119/176 (67.61%), Query Frame = 1


		  
Query: 125 QTITEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVR 184
           Q   EI T   +     N+   +L  L +E  + K++++R+ ADFDNFR+R  +++  ++
Sbjct: 42  QKTEEINTEELKNTISNNDA--RLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLK 101

Query: 185 SDAQGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVAT 244
                + + ++LP+VDNFERA+QQLKPE+++ + +  SYQG+YKQ VE+++   V+ +  
Sbjct: 102 IQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRV 161

Query: 245 VGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKK 301
           VG+ FDP+LHEA+ RE SEEF+E  + +E +RG+ L  ++LR A+ KVS GPGK+K
Sbjct: 162 VGQQFDPNLHEAVLREPSEEFEEDFIIEELQRGYHLEGKVLRHALAKVSMGPGKQK 215

[Close]

BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
Match: GRPE_PROM3 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9303) GN=grpE PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.300e-34
Identity = 75/178 (42.13%), Postives = 120/178 (67.42%), Query Frame = 1


		  
Query: 138 ETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESLLP 197
           E    +L ++ S+L EE  + + +++R+ ADFDNFR+R  +++  +R       +  +LP
Sbjct: 47  EARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRLQLICTTLSEILP 106

Query: 198 MVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLHEAI 257
           +VDNFERA+QQL+P+ ++ + +  SYQG+YKQ VE+++ L VA +  VG+ FDP+LHEA+
Sbjct: 107 VVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVEVLKQLGVASMRVVGQAFDPTLHEAV 166

Query: 258 AREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKKKDDAAATQISPEQPA 316
           +RE SEE  E +VT+E +RG+ L  R+LR A+VKVS GPG +     ++ Q + +  A
Sbjct: 167 SREPSEEHPEDVVTEELQRGYHLNGRVLRHALVKVSMGPGPQSGASPSSAQSNDDSTA 224

[Close]

BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
Match: GRPE_SYNS9 (Protein GrpE OS=Synechococcus sp. (strain CC9902) GN=grpE PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.500e-34
Identity = 79/181 (43.65%), Postives = 123/181 (67.96%), Query Frame = 1


		  
Query: 128 TEIETAFYRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDA 187
           TEI+ A  RL+    +L ++L++L +E  + + +++R+ ADFDNFR+R  +++  +R   
Sbjct: 43  TEIDPA-NRLQ----QLEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARDQDDLRQQL 102

Query: 188 QGEVIESLLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGK 247
               +  +LP+VDNFERA+QQL PE ++ + +  SYQG+YKQ V++++   VA +  VG+
Sbjct: 103 VCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQ 162

Query: 248 PFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKKKDDAAAT 307
            FDP+LHEA+ REE++E  E IV +E +RG+    R+LR AMVKVS GPG +   DAA+ 
Sbjct: 163 EFDPTLHEAVLREENQEHAEDIVCEELQRGYHRDGRVLRHAMVKVSMGPGPESSSDAASE 218

Query: 308 Q 309
           Q
Sbjct: 223 Q 218

[Close]

BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
Match: GRPE_PROMM (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9313) GN=grpE PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.500e-34
Identity = 78/189 (41.27%), Postives = 123/189 (65.08%), Query Frame = 1


		  
Query: 138 ETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESLLP 197
           E    +L ++ S+L EE  + + +++R+ ADFDNFR+R  +++  +R       +  +LP
Sbjct: 47  EARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRFQLICTTLSEILP 106

Query: 198 MVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLHEAI 257
           +VDNFERA+QQL+P+ ++ + +  SYQG+YKQ V++++ + VA +  VG+ FDP+LHEA+
Sbjct: 107 VVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVDVLKQMGVASMRVVGQVFDPTLHEAV 166

Query: 258 AREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKK---------KDDAAAT- 315
           +RE SEE  E +VT+E +RG+ L  R+LR A+VKVS GPG +           DD+ AT 
Sbjct: 167 SREPSEEHPEDVVTEELQRGYHLNGRVLRHALVKVSMGPGPQSGASPSSAQPNDDSTATF 226

[Close]

BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
Match: GRPE_SYNSC (Protein GrpE OS=Synechococcus sp. (strain CC9605) GN=grpE PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.500e-34
Identity = 78/177 (44.07%), Postives = 116/177 (65.54%), Query Frame = 1


		  
Query: 143 ELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESLLPMVDNF 202
           +L ++LS L +E  +   +++R+ ADFDNFR+R  +++  +R       +  +LP+VDNF
Sbjct: 49  QLEQELSALKQEHDTLNSQYMRIAADFDNFRKRQSRDQDDMRKQLVCSTLTEILPVVDNF 108

Query: 203 ERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLHEAIAREES 262
           ERA+QQL PE ++ + +  SYQG+YKQ VE+++   VA +  VG+ FDP+LHEA+ REES
Sbjct: 109 ERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKQQGVARMDVVGQEFDPNLHEAVLREES 168

Query: 263 EEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKKKDDA-AATQISPEQPAAAA 319
            EF E +V++E +RG+    R+LR AMVKVS GPG      A A    +P+Q A  A
Sbjct: 169 SEFAEDVVSEELQRGYHRDGRVLRHAMVKVSMGPGPSDPGSAPAEAAAAPDQTAEEA 225

[Close]

BLAST of Spo23558.1 vs. TAIR (Arabidopsis)
Match: AT1G36390.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 233.8 bits (595), Expect = 1.500e-61
Identity = 123/215 (57.21%), Postives = 173/215 (80.47%), Query Frame = 1


		  
Query: 97  EETSTKNMWESVETLTKYYKEAVLAGDYQTITEIETAFYRLETEKNELVEKLSTLTEEIT 156
           EE ++K   + V+TL + YK+A+L GD  ++TEIET F ++E EKN++ +K+ +L+ +I 
Sbjct: 65  EEANSKQQAD-VKTLIRSYKQALLNGDETSVTEIETMFCKIEKEKNKMDQKVLSLSMKIA 124

Query: 157 SGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESLLPMVDNFERAKQQLKPETDKE 216
           S K+  IRLQADFDN R++ DK+RLS  S+A+ ++++SLLP++D+FE+AK Q++ +TDKE
Sbjct: 125 SEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPIIDSFEKAKLQVRVDTDKE 184

Query: 217 KQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRR 276
           K+IDTSYQGIY+QFVE++R LRV+V+ATVGKPFDP LHEAI+REESE  K GI+T+E  +
Sbjct: 185 KKIDTSYQGIYRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITEELNK 244

Query: 277 GFLLGDRLLRPAMVKVSSGPGKKKKDDAAATQISP 312
           GF+LGDR+LRPA VKVS GP   KK  +AA +I+P
Sbjct: 245 GFVLGDRVLRPAKVKVSLGP-VNKKTPSAAEEITP 277

[Close]

BLAST of Spo23558.1 vs. TAIR (Arabidopsis)
Match: AT5G17710.2 (Co-chaperone GrpE family protein)

HSP 1 Score: 215.7 bits (548), Expect = 4.200e-56
Identity = 123/248 (49.60%), Postives = 174/248 (70.16%), Query Frame = 1


		  
Query: 75  EEQDSTTTMDEEMLEEEVGETEEETSTKNMWESVETLTKYYKEAVLAGDYQTITEIETAF 134
           +E D    ++ E    E GE EEE +       +  L K YKEA+   +   I EIE + 
Sbjct: 84  QETDGAVDVENENASAEEGEAEEEEAAV-----ITALLKSYKEALADNNEGKIAEIEASL 143

Query: 135 YRLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIES 194
             +E EK  L +K+++L+ E++  +DR IR+ ADFDNFR+R+++ERL++ S+AQGEV+E+
Sbjct: 144 KSIEDEKFLLADKVASLSNELSVERDRLIRISADFDNFRKRTERERLNLVSNAQGEVVEN 203

Query: 195 LLPMVDNFERAKQQLKPETDKEKQIDTSYQGIYKQFVEIMRSLRVAVVATVGKPFDPSLH 254
           LL ++DNFERAK Q+K ET+ E+++  SYQ IYKQFVEI+ SL V  V TVGK FDP LH
Sbjct: 204 LLAVLDNFERAKSQIKVETEGEEKVTNSYQSIYKQFVEILGSLGVIHVETVGKQFDPMLH 263

Query: 255 EAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSGPGKKK----KDDAAATQIS 314
           EAI RE+S E++EGIV +EYR+GFLLG+RLLRP+MVKVS+GPG +K    + + A  Q S
Sbjct: 264 EAIMREDSAEYEEGIVLEEYRKGFLLGERLLRPSMVKVSAGPGPEKPLEAEGEEATAQGS 323

Query: 315 PEQPAAAA 319
            E+ ++++
Sbjct: 324 AEEESSSS 326

[Close]

BLAST of Spo23558.1 vs. TAIR (Arabidopsis)
Match: AT4G26780.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 66.6 bits (161), Expect = 3.200e-11
Identity = 54/185 (29.19%), Postives = 85/185 (45.95%), Query Frame = 1


		  
Query: 136 RLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESL 195
           +L  EK EL   LS   EEI   KD+ +R  A+ +N   R+ ++  + +  A     +SL
Sbjct: 146 KLVAEKEEL---LSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSL 205

Query: 196 LPMVDNFERAKQQLKPETDK----------EKQIDTSYQGIY---KQFVEIMRSLRVAVV 255
           L + DN  RA   +K    K             + T  +G+    KQ  E+ +   +   
Sbjct: 206 LDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKY 265

Query: 256 ATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVSSG---PGKK 305
             + +PFDP+ H A+ +       EG V    + G+ L DR++RPA V V+ G     +K
Sbjct: 266 DPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVGVTQGGENQEEK 325

[Close]

BLAST of Spo23558.1 vs. TAIR (Arabidopsis)
Match: AT5G55200.1 (Co-chaperone GrpE family protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.300e-9
Identity = 49/174 (28.16%), Postives = 80/174 (45.98%), Query Frame = 1


		  
Query: 136 RLETEKNELVEKLSTLTEEITSGKDRFIRLQADFDNFRRRSDKERLSVRSDAQGEVIESL 195
           +L +EK +L   L    ++I   KD+F+R  A+  N   R+++   S +  A      SL
Sbjct: 121 KLVSEKEDL---LKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSL 180

Query: 196 LPMVDNFERAKQQLKPETDKEKQIDTS-------------YQGI---YKQFVEIMRSLRV 255
           L + DN ERA   +K    K   IDTS              +G+    KQ  E+ R   +
Sbjct: 181 LDVADNLERASSVVKESFSK---IDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGL 240

Query: 256 AVVATVGKPFDPSLHEAIAREESEEFKEGIVTQEYRRGFLLGDRLLRPAMVKVS 294
                + +PF+P+ H A+ +       +G +    + G+ L DR++RPA V V+
Sbjct: 241 VKEDPLNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVT 288

The following BLAST results are available for this feature:

BLAST of Spo23558.1 vs. NCBI nr
BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
BLAST of Spo23558.1 vs. TAIR (Arabidopsis)

BLAST of Spo23558.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195589\|gb\|KNA12889.1\|	1.2e-156	93.8	hypothetical protein SOVF_1212...	[more]
gi\|731310710\|ref\|XP_010672791.1\|	1.3e-110	73.3	PREDICTED: grpE protein homolo...	[more]
gi\|255545570\|ref\|XP_002513845.1\|	9.1e-77	55.3	PREDICTED: protein GrpE [Ricin...	[more]
gi\|802634724\|ref\|XP_012078137.1\|	2.0e-76	58.0	PREDICTED: grpE protein homolo...	[more]
gi\|225459431\|ref\|XP_002285824.1\|	3.4e-76	66.4	PREDICTED: grpE protein homolo...	[more]

BLAST of Spo23558.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1S8_SPIOL	8.1e-157	93.8	GrpE protein homolog OS=Spinac...	[more]
A0A0J8D2Q2_BETVU	8.7e-111	73.3	GrpE protein homolog OS=Beta v...	[more]
B9RJC6_RICCO	6.3e-77	55.3	GrpE protein homolog OS=Ricinu...	[more]
A0A067K9H6_JATCU	1.4e-76	58.0	GrpE protein homolog OS=Jatrop...	[more]
E0CRD7_VITVI	2.4e-76	66.4	GrpE protein homolog OS=Vitis ...	[more]

BLAST of Spo23558.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
GRPE_PROM0	4.3e-34	42.0	Protein GrpE OS=Prochlorococcu...	[more]
GRPE_PROM3	4.3e-34	42.1	Protein GrpE OS=Prochlorococcu...	[more]
GRPE_SYNS9	9.5e-34	43.6	Protein GrpE OS=Synechococcus ...	[more]
GRPE_PROMM	9.5e-34	41.2	Protein GrpE OS=Prochlorococcu...	[more]
GRPE_SYNSC	9.5e-34	44.0	Protein GrpE OS=Synechococcus ...	[more]

BLAST of Spo23558.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G36390.1	1.5e-61	57.2	Co-chaperone GrpE family prote...	[more]
AT5G17710.2	4.2e-56	49.6	Co-chaperone GrpE family prote...	[more]
AT4G26780.1	3.2e-11	29.1	Co-chaperone GrpE family prote...	[more]
AT5G55200.1	1.3e-9	28.1	Co-chaperone GrpE family prote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 163..179 score: 2.5E-25coord: 273..292 score: 2.5E-25coord: 191..206 score: 2.5E-25coord: 246..261 score: 2.5
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 74..294 score: 17
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 68..297 score: 1.5E
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 137..293 score: 1.2
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 249..292 scor
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10		coord: 239..296 score: 6.5
IPR009012	GrpE nucleotide exchange factor, head	unknown	SSF51064	Head domain of nucleotide exchange factor GrpE	coord: 240..295 score: 2.09
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 138..235 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 134..154 scor
None	No IPR available	PANTHER	PTHR21237:SF4	GRPE PROTEIN HOMOLOG	coord: 68..297 score: 1.5E
None	No IPR available	unknown	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 142..235 score: 1.57

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0048481	plant ovule development
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006950	response to stress
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005759	mitochondrial matrix
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0016853	isomerase activity