Spo23610.1 (mRNA) | SpinachBase

Overview


Name	Spo23610.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transmembrane protein 50a, putative
Location	chr2 : 51398697 .. 51404102 (-)
Sequence length	1171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCGACCACTTGATCTTGAAGGTGATAAGTCGCAACAAATATCTTTTGAATTCCATGCATGTCTTATATTTTTTCCCCTTATAAGCATCACAATCTTACTCTTTACCGACTCACGTTGCGTTTAGCCGTTTAGGGGTCACAAAATGACACTGAAGTAAAAGTTCTCAACAACACCTTATTCTTAAATCTTAATAAGCCTGTTGACAACAAGTAGAAGAAAAACCCATCAATCATTCCCATTTCCCAGCTTCCACTACACGTAAAACCAAACAAAAGAATGGATATACCGGAGCTACTTGCAATATTCGGGCCGGGTATCGCCGGCGCCGTATTCGGGGCGGGCTGGTGGTTTTGGGTTGACGCCGTGGTTTGCAGCTCCATCGTCGTCTCTTTCGTCCACTATCTCCCTGGTATCTCTCTCTCTTTCTTTTCTCTCTCCTCAATCTTTCTCCCCCCAAAACTCACTGATTTTAGGGTTTCTGCTTTGGTAATGTTTTTGATTAGGAATATTTGCATCTTTGGCGGCTTTGATGTTCAATTGTGTGAGGAAAGAAGACATCGATTACTCCCCTTACGATGATGGGGAGTGGAGGTATTTTTCCTTTTCTTTGAATCAAACTTCTGACTTTTTGATTTTCTATTGCAATTCGTAGTGTTTTTAGTGTTGTGTCTAATTTGATTGCTCAATGCCATAATTTTTTTATGCTGAAGTGTTTGATTTGATGATGATGATCAGAGATTTTGGCTTTGATGTTATTCTCATCATCTGATCATATATTAGAGTGGTTTATTGTAATCGTATGATCTTATCTGCATATATTAGAGTGTTTTATTGTAATCATATGATCTTATCTACATATTGGTTCTGCTTGAAAAACAGATACTTTTTTGTTTCACTCTTCTTTATCTTATCATCATTTTCGAAATTCTCTGATCACAGATACGTCCCTCGTGGATTGTGGTCACAGTAGGGAAATTTGATTAATTTTACTTTGTTGGCAAATGAGTACTTTGTTTTATGGAGTTGTGGGTTGGTTTAGGTCTCCTGTAGAAAAGATTGTTGGATGGGTATCGTCGATGATGGTAGAGTTATGTTTATAGATACTGAAACGTAGCTTGCAGCGAACTAGGATAATTACTTCTATGAGTAATCTTTTATAATTAATTGACATGGGATGGAAGTATGGAATTGAAGAGAAATGAATTGATGGGGTGGAAATGCTTGCTTATCTTATAGACTGGTAGCTATTAGCTAGACAGAATGTGGTAGAACTATTGGAATGTGTATTGCTGCTTGCATGTGAAATTTTGGATATCAACTCAGCTGCTACTGCTAGCCTATAACTATTTTAATATGCTTATATGTTCTTCTAAACGATATCGCAGATTGAAGCTCTGGCTTTTCCTTGCTTATGTCGTATCTTTTGTGTCACTTGCGGCATCAGTTGGGCTGCTTATACAAGATGCCATGTTGCCTTCTGGACCATCAACATGGACTGGGGTTGCGGGTGTCTTGCAGTGTGTATTTGTGCTGATTAGGTTGGTATTGTTTTTCTGACATTCAATTTACTTTCTTTTCTGTCAATTTTATTTGTATGCATTTGACACATTTTGATGCTCCATTTTGGCATTTTTTGAAGTATACATCTTCCTCGCACTGTTTTATACCCTTCCTCCCAAAGAAAATGCATAATTTGAAACTTGGGATTGCTTTCTTTGTTTTAGACTCATTATGTGGTTATAGAACTTGGATAACTGGTATGGAGGAAATGGTCATTAAACACATTCTAGCCCACTATGTTAACAAGATAAGAGCTGAGTGTCTGAGTGCTTCAAGTTTAGTTAAGAATGAGGTGCCTTGTCATCTACAACAAGGGAAAATAGTAAAATTGGAAAGTTTTGATTTTTTGGAAGTTAACTTTCAGTTAGTTTAAAATTATATAAAAGATCCATCAAGTTTGGATGATCCTTGACCTTTTAACTTCACTTCTATTTTTAATTTTGAGTGTGTGTGTTGGGAAAGGGGCCTTTAAGTTTGAACTTCACTTACGAATATGCTCTTGTGTTTCTAAGTTCAAAGAATCATCAAGTTTGGGTGATCCTTATATGGATGCACATGCACTTTCAGTCTTACAGACCTTTTAACTTCACTTCTTTTTGTTCTTGTTTTTTTGTTTTGTTTTTTGTGTGTCTAAGTTTGTTTATTTTCCCATGGCTGACTCTTGGTTTTACCTGAATCTAGTACCCGTAACTTGGTGCATAGCATTTGATAGTAGCATAAGAACCAAGATTCATTTCTCTTCTCAAATGTTACTCATGACCAAGAACCCCTTATAAACACCCGTTGAAGATCTCAGTTAAAGTTGCATGAATGCTTCCTAACTTCTTAGCAACATTGTGTTGTTATGTGAGTCATACGACTCGTGTGAAGGCCCCTTTAAGGGTATAAACCCTCTCATGTGATCTTTACTTTGGGTAATCTAAAGCATACTCATAGCAAATTAATGCCTACAAAATTGATTGCATTGGGTAAAATTCATAAGCCATGACTAAAATCATATGCCATGAACTAGTGGAATTCTATTTAACCATGGGAGGGTATTTTTCTTTTTCTTTGGGGGGGGGGGGGGTGGAGGGATTGAAGGGCAATCTCGAGTTGCTGATGTGATGATAGTGGACATGATCTAGTAGTGGTTTTAAGACCCACCTAATAACTCCTGTTAGAAGACCATGATGATTCCCAATAAAAATTGGATAGAAGTCGCGTTGACAGCGAAGAAGCTTCAGATGTTAACTCTTAGTGAACCTTGCCCCTGACAGACTCGTTACAAATTGATGTGCATGAGACACTTTTAGAGTTAGAGAAAACCTCAGTGTGACTTGGAGGGAATTATATATTTTATGAAGATCCCTAGACACTAGTCATAATATAATCTCCTAATGACGGCAGAAAATCTCAAGTGACTTGCTAGAATCATTCTAAAGGTGATATCCTCTAACAATGGCCCTAGATATAAATAGGAACATTTTCTTAATCTTTTTCTAATGGATAATAGGAAAGTCTTCTATCTATAAGTATTTGACCAATCATGCCAGATGTCAACATCCTAGAATGGAGCTTGTTTCAAATTGGTAAGTTAGACTGTAATAGGAGATGCTGAACTCAATAATTCCTAAGAAATTTCCATTTTGAAGGATATAACTTTTGTAGATCTATCTCGAGGCACTAGTAAAGGTTAATAGAATCTTTTGTCCATCAATAGGCAGGTCCTCCGTAGATGAACGTAGCCCATTACTGATCACTTTTCACCAAATTATAAGTCATATATGTAGACCTTTTTCGGGCACAGAATCTTCCATCGAAATTTGTGGCAAACTCTCTTGTGCCATGGTTTCTTAAGTGGTTAATAATGACCATTGGTTGCTTAAGTGGTTAATGATGACCCATGGCTGCTTAAGTGGTTGATAATGACCATTGTTTTCATAAAATGTTTTAGGACCACTGTTAGGTCTAAATGAAGTTTGTAAGAAAGCATCCTTAGATCTAACAGTTGCTACGAATCAAAATTATGGAGAGGGGCACTTTAGGTAGTATCTTAAGTTAGTTATGGGTAGCTTGGGGAATAACTTAGGGAGCTAGCTAGGGAAAGGAGTGTTATATACAGAGCATATTAGAGTTAGGGAAAGGCATGTTTGATTAGAGTATTTCGGGTTAGCTTAGTAAGCTAAATTGGGAGAGAATCCACCTCTCAAAAGTGGAATTGTCATTCACATTTGCTGTAACTTCCATCTTAATCAAATCATCATCTTCATCCAATTTTCTGACATTAATGATGCTCAAGCTATGTTAATTCATAGCAACAACCAATAGATTAATGATGCGAGATTGATGATTCTACCAACAACATTGAGCCCTCTCAATGCGAGATTGTTTGTTTCTTCCCACTTTTATTGTTTTTGGCTTTTCGTTCAACCTTCTAAATAAAATCACTCTTCTATAAAGACTAACATGAAAGGAGGGTATTTTTGGTGATGAAAAAGAAGTCAAAATATATAAAGCCTTTTGCGAAAATATTTCCCTTGTGCGTGCCTTTGCCTCATGACTCACACCTCGACACAGGAAACTTTTTGTGCCTCAGAGTACTCCATGCTTAGCCTTTCCCCATGGGACATTGCTTCCATTCTCTCAAACCAGAGAGTAATTTGAAACTACGAAAGTTTTTTCTTTTTCATTTTTTTGTTTTAGGTCAAGAAATCTCTCTTTGGAGTTTGGAGGAAAATAACATTCTTGCCATATTTCTTTTCACTGTACAAATTGAATTATTTTGGTTAACAATGAAACGAGTTGGCTTTATTGTCTACAATTAGGCGAAATACACGTTTTGTGAATGAACTATGAGAAATTGGATACTTTGTGCCATGTGGAAAGCCTCTACGCTTATAAGGTATTTTCAAGTAATAAATATTTAAGAACACAAATAAGATCCCATCCATTATACTTCATACTCCTCTGTATGATTTCCCTTGTAGGTCCTTTTTACTTTAGTCTATGATGCGTGCTTGTGTATTCTGGCTTCTGCCTGCTTGCTCTAGTAACTGCATGCATTGCCGCTCTGTTAACGTTCACGTTTCCTTTGTCCTGAGTCTATGACTCTCCTGAGACTTCTGATCTTTAAACCTTTGATTGTGTGGTTGAAATACAACTTTGGCGAATCAACAGTCGATATACTTTGTTTACTTTTATCATGCTTGCTCTGCCAAGGGTTTGTTTTGCACTTAGATATCTGCAGTCAATTACTGGGTTACTGGGTTACTGGGTATGTACAACCTATCAAGTCTTTTGTTTGCTCACAATTTGATACATTTTTTTTGTTTTGGTTTGATAGTGGGTTGATCTATTGGACTTCACATTCCGAGTAGCTGGCTACATATTGAAGGTGTTTGAGACTTGTACTTATTTTAACTCGAATGTGCAGTAAAATAGTAGTTCATCTTTGTGTAAATGTTTGTAATATGCAACTGGCTATGAGCAACTAAGACGAGCCTAACTTCAATTTCTGGAATCTCTTGGTTCTTATGCTGTGAGGTGGTGTTTGGTATAATTGTTGAGCATTTCTAGGCTTGGGAATACTACATATAATCTTAAACTTTTATTCTACATAATCTTGTCACTTAAAGCATTATCAAACATATCCGCTTATACTAACTCCGTTTCAAAATGATTTTTACATTTTCCATTGTAGTCTGTTTCATAATGTTCTTTGCATTGTATTTCATACTATTGTTTGACATGAAAATTTACTATTTTACCTTTGTTACTGCAACATTTCTTATACTTCATTCATTTTTTTGTTATACCCACACGCTTTTTGTAAATTTCTCTTATTTTATCCATATTTTATTAT

mRNA sequence

GCCCGACCACTTGATCTTGAAGGTGATAAGTCGCAACAAATATCTTTTGAATTCCATGCATGTCTTATATTTTTTCCCCTTATAAGCATCACAATCTTACTCTTTACCGACTCACGTTGCGTTTAGCCGTTTAGGGGTCACAAAATGACACTGAAGTAAAAGTTCTCAACAACACCTTATTCTTAAATCTTAATAAGCCTGTTGACAACAAGTAGAAGAAAAACCCATCAATCATTCCCATTTCCCAGCTTCCACTACACGTAAAACCAAACAAAAGAATGGATATACCGGAGCTACTTGCAATATTCGGGCCGGGTATCGCCGGCGCCGTATTCGGGGCGGGCTGGTGGTTTTGGGTTGACGCCGTGGTTTGCAGCTCCATCGTCGTCTCTTTCGTCCACTATCTCCCTGGAATATTTGCATCTTTGGCGGCTTTGATGTTCAATTGTGTGAGGAAAGAAGACATCGATTACTCCCCTTACGATGATGGGGAGTGGAGATTGAAGCTCTGGCTTTTCCTTGCTTATGTCGTATCTTTTGTGTCACTTGCGGCATCAGTTGGGCTGCTTATACAAGATGCCATGTTGCCTTCTGGACCATCAACATGGACTGGGGTTGCGGGTGTCTTGCAGTGTGTATTTGTGCTGATTAGTGGGTTGATCTATTGGACTTCACATTCCGAGTAGCTGGCTACATATTGAAGGTGTTTGAGACTTGTACTTATTTTAACTCGAATGTGCAGTAAAATAGTAGTTCATCTTTGTGTAAATGTTTGTAATATGCAACTGGCTATGAGCAACTAAGACGAGCCTAACTTCAATTTCTGGAATCTCTTGGTTCTTATGCTGTGAGGTGGTGTTTGGTATAATTGTTGAGCATTTCTAGGCTTGGGAATACTACATATAATCTTAAACTTTTATTCTACATAATCTTGTCACTTAAAGCATTATCAAACATATCCGCTTATACTAACTCCGTTTCAAAATGATTTTTACATTTTCCATTGTAGTCTGTTTCATAATGTTCTTTGCATTGTATTTCATACTATTGTTTGACATGAAAATTTACTATTTTACCTTTGTTACTGCAACATTTCTTATACTTCATTCATTTTTTTGTTATACCCACACGCTTTTTGTAAATTTCTCTTATTTTATCCATATTTTATTAT

Coding sequence (CDS)

ATGGATATACCGGAGCTACTTGCAATATTCGGGCCGGGTATCGCCGGCGCCGTATTCGGGGCGGGCTGGTGGTTTTGGGTTGACGCCGTGGTTTGCAGCTCCATCGTCGTCTCTTTCGTCCACTATCTCCCTGGAATATTTGCATCTTTGGCGGCTTTGATGTTCAATTGTGTGAGGAAAGAAGACATCGATTACTCCCCTTACGATGATGGGGAGTGGAGATTGAAGCTCTGGCTTTTCCTTGCTTATGTCGTATCTTTTGTGTCACTTGCGGCATCAGTTGGGCTGCTTATACAAGATGCCATGTTGCCTTCTGGACCATCAACATGGACTGGGGTTGCGGGTGTCTTGCAGTGTGTATTTGTGCTGATTAGTGGGTTGATCTATTGGACTTCACATTCCGAGTAG

Protein sequence

MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRKEDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCVFVLISGLIYWTSHSE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23610	Spo23610	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23610.1	Spo23610.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23610.1.utr5p.1	Spo23610.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23610.1.CDS.4	Spo23610.1.CDS.4	CDS
Spo23610.1.CDS.3	Spo23610.1.CDS.3	CDS
Spo23610.1.CDS.2	Spo23610.1.CDS.2	CDS
Spo23610.1.CDS.1	Spo23610.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23610.1.utr3p.1	Spo23610.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23610.1.exon.4	Spo23610.1.exon.4	exon
Spo23610.1.exon.3	Spo23610.1.exon.3	exon
Spo23610.1.exon.2	Spo23610.1.exon.2	exon
Spo23610.1.exon.1	Spo23610.1.exon.1	exon

Homology

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BLAST of Spo23610.1 vs. NCBI nr
Match: gi|902195578|gb|KNA12878.1| (hypothetical protein SOVF_121180 [Spinacia oleracea])

HSP 1 Score: 280.4 bits (716), Expect = 1.600e-72
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. NCBI nr
Match: gi|731310686|ref|XP_010671732.1| (PREDICTED: transmembrane protein 50 homolog isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 265.8 bits (678), Expect = 4.200e-68
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPG AGAVFGAGWWFWVDAVVCS++ VSFVHYLPGIFASL+ALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGFAGAVFGAGWWFWVDAVVCSAVAVSFVHYLPGIFASLSALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLFLAYV+SFVSLAASVGLLIQDA++P+GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPTGPSAWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. NCBI nr
Match: gi|510937263|gb|AGN52920.1| (hypothetical protein [Silene latifolia])

HSP 1 Score: 261.9 bits (668), Expect = 6.100e-67
Identity = 121/135 (89.63%), Postives = 132/135 (97.78%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           M+I ELLAIFGPGI+GAVFGAGWWFWVDAVVCS++ +SF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MEISELLAIFGPGISGAVFGAGWWFWVDAVVCSAVTISFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVV+FVSLAASVGLLIQDA++PSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDALVPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSH E
Sbjct: 121 FVLISGLIYWTSHLE 135

[Close]

BLAST of Spo23610.1 vs. NCBI nr
Match: gi|697161168|ref|XP_009589362.1| (PREDICTED: transmembrane protein 50 homolog [Nicotiana tomentosiformis])

HSP 1 Score: 259.6 bits (662), Expect = 3.000e-66
Identity = 122/135 (90.37%), Postives = 129/135 (95.56%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD PEL AIFGPG++GAVFGAGWWFWVDAVVCSS+ VSF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MDFPELWAIFGPGVSGAVFGAGWWFWVDAVVCSSVKVSFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVVSFVSLAASVGLLIQDA+  SGPS WTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAASVGLLIQDALGKSGPSAWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. NCBI nr
Match: gi|1000977990|ref|XP_015571620.1| (PREDICTED: transmembrane protein 50A [Ricinus communis])

HSP 1 Score: 257.7 bits (657), Expect = 1.100e-65
Identity = 119/135 (88.15%), Postives = 129/135 (95.56%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD+PEL AIFGPG+AGAVFGAGWWFWVDAVVCS++ VSFVHYLPGIFAS+AALMFNCVRK
Sbjct: 1   MDLPELWAIFGPGVAGAVFGAGWWFWVDAVVCSAVKVSFVHYLPGIFASIAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPY++GEWRLKLWLF AYVVSFVSLAASVGLLIQD+++ SGPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLVKSGPSVWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R041_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121180 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.100e-72
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D757_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g000430 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.900e-68
Identity = 123/135 (91.11%), Postives = 131/135 (97.04%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MDIPELLAIFGPG AGAVFGAGWWFWVDAVVCS++ VSFVHYLPGIFASL+ALMFNCVRK
Sbjct: 1   MDIPELLAIFGPGFAGAVFGAGWWFWVDAVVCSAVAVSFVHYLPGIFASLSALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLFLAYV+SFVSLAASVGLLIQDA++P+GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPTGPSAWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: R9UE90_SILLA (Uncharacterized protein OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.200e-67
Identity = 121/135 (89.63%), Postives = 132/135 (97.78%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           M+I ELLAIFGPGI+GAVFGAGWWFWVDAVVCS++ +SF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MEISELLAIFGPGISGAVFGAGWWFWVDAVVCSAVTISFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVV+FVSLAASVGLLIQDA++PSGPSTWTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDALVPSGPSTWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSH E
Sbjct: 121 FVLISGLIYWTSHLE 135

[Close]

BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: M1CNS7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027793 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.000e-65
Identity = 121/135 (89.63%), Postives = 128/135 (94.81%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD  EL AIFGPG+AGAVFGAGWWFWVDAVVCSS+ +SF+HYLPGIFASLAALMFNCVRK
Sbjct: 1   MDFSELWAIFGPGVAGAVFGAGWWFWVDAVVCSSVKISFLHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVVSFVSLAASVGLLIQDA+  SGPS WTGVAGVLQCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVSFVSLAASVGLLIQDALGKSGPSAWTGVAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Match: A0A067GZQ4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032718mg PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.800e-65
Identity = 119/135 (88.15%), Postives = 129/135 (95.56%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD+ EL AIFGPG+AGAVFGAGWWFW+DAVVCSS+ VSFVHYLPGIFASLAALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGVAGAVFGAGWWFWIDAVVCSSVKVSFVHYLPGIFASLAALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPY++GEWRLKLWLFLAYVVSFVSLAASVGLLIQD+++ +GPS WTG AGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFLAYVVSFVSLAASVGLLIQDSLVKTGPSAWTGTAGVLQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGLIYWTSHSE
Sbjct: 121 FVLISGLIYWTSHSE 135

[Close]

BLAST of Spo23610.1 vs. TAIR (Arabidopsis)
Match: AT1G36980.1 (unknown protein)

HSP 1 Score: 250.0 bits (637), Expect = 8.400e-67
Identity = 116/135 (85.93%), Postives = 126/135 (93.33%), Query Frame = 1

		  
Query: 1   MDIPELLAIFGPGIAGAVFGAGWWFWVDAVVCSSIVVSFVHYLPGIFASLAALMFNCVRK 60
           MD+ EL AIFGPG +GAVFG GWWFWVDAVVCSSI V FVHYLPGIFASL ALMFNCVRK
Sbjct: 1   MDLAELWAIFGPGFSGAVFGTGWWFWVDAVVCSSIQVPFVHYLPGIFASLGALMFNCVRK 60

Query: 61  EDIDYSPYDDGEWRLKLWLFLAYVVSFVSLAASVGLLIQDAMLPSGPSTWTGVAGVLQCV 120
           EDIDYSPYD+GEWRLKLWLF+AYVV+FVSLAASVGLLIQD+++ +GPSTWTGVAGV QCV
Sbjct: 61  EDIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCV 120

Query: 121 FVLISGLIYWTSHSE 136
           FVLISGL+YWTSHSE
Sbjct: 121 FVLISGLMYWTSHSE 135

The following BLAST results are available for this feature:

BLAST of Spo23610.1 vs. NCBI nr
BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
BLAST of Spo23610.1 vs. ExPASy Swiss-Prot
BLAST of Spo23610.1 vs. TAIR (Arabidopsis)

BLAST of Spo23610.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902195578\|gb\|KNA12878.1\|	1.6e-72	100.	hypothetical protein SOVF_1211...	[more]
gi\|731310686\|ref\|XP_010671732.1\|	4.2e-68	91.1	PREDICTED: transmembrane prote...	[more]
gi\|510937263\|gb\|AGN52920.1\|	6.1e-67	89.6	hypothetical protein [Silene l...	[more]
gi\|697161168\|ref\|XP_009589362.1\|	3.0e-66	90.3	PREDICTED: transmembrane prote...	[more]
gi\|1000977990\|ref\|XP_015571620.1\|	1.1e-65	88.1	PREDICTED: transmembrane prote...	[more]

BLAST of Spo23610.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R041_SPIOL	1.1e-72	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D757_BETVU	2.9e-68	91.1	Uncharacterized protein OS=Bet...	[more]
R9UE90_SILLA	4.2e-67	89.6	Uncharacterized protein OS=Sil...	[more]
M1CNS7_SOLTU	1.0e-65	89.6	Uncharacterized protein OS=Sol...	[more]
A0A067GZQ4_CITSI	1.8e-65	88.1	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo23610.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo23610.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT1G36980.1	8.4e-67	85.9	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007919	Uncharacterised protein family UPF0220	PANTHER	PTHR13180	SMALL MEMBRANE PROTEIN-RELATED	coord: 8..135 score: 2.0
IPR007919	Uncharacterised protein family UPF0220	PFAM	PF05255	UPF0220	coord: 13..133 score: 8.8
None	No IPR available	PANTHER	PTHR13180:SF3	SUBFAMILY NOT NAMED	coord: 8..135 score: 2.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
cellular_component	GO:0016021	integral component of membrane