Spo23841.1 (mRNA) | SpinachBase

Overview


Name	Spo23841.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	F-box protein interaction domain protein
Location	chr2 : 53849778 .. 53851323 (-)
Sequence length	720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATAGCAGGCAAACCCTAGCAGTAGATTGTCTGTACAACACAGTGATGGAGGAAATACTGCCAAGACTCCAGGTAAAATCCCTAATTCGTTTCAAATCTGTTTGCAAGGATCGGCTGTTTACTATTTCTAAAGGTTCATTTGCAAAATCCCAGATTAAATTATGTATCCCCTCCCATCAAATTATCGTGTTAACCACTAGTCCGATTGAATCCATTAAACAACTTAATTCCTTTTACTTGTTAAACCGCGATGATGAACCCAGCGACCACCTGAAACAGTTGATGAATTTAGATGATGATGATTTCCATAATAATGTTCTAGACCTACTCATAGTGGGTACTTGTAAAGGTCTTGTATGCTTGTATTTCCGAGGAAAATGTGGTTTCTGCCGTATTTGGAATCCTGCTACGAATCAATATCGCGATATTGTTAATCCAGATGATCATCAAGGATGGGGGGTTCAATCTCATGGGTTCGGATATGTATCTTCTACTGATGATTACAAGATTGTTTCTTGGTCTACAAGTATTAAGGACTCTATAAAACGTCTTTATGTTTTTTCGTTGAAAGCTGGTAATTGGAAAAGTGTTTCTAGCCTTTTTAAAATGCGAATGCCTGATGGTATTGAAAAATCTGTGTTGGTTGATGAGAGTGTATTTTGGATTTGTCAGAAAGGGGGAATTTTGGTGTAATGTGCAACACATTCTTTGCTTTGATTTGGGTACCGAAAAATTTAAAGAAATCCCATGGATGGATTCGATGAATGCTAGATATGACACTACCATCAAACTTTCTGCAATCAATGGATATTTGTCATTCATTTGTCCCTGTAGAAGTATAACTAAGGATGTGGATGTTTGGATGTTGAAACAATCTGGGAATTGTGATTCCATGGAGAAACTATTCTCTTTAAGTTTAAGTAGAGGTATGTCTTTGATTACCATCTTTGAGAATGGTAAGTGTTTGGTCCGATATGAAAACAACAAGGTAAAAGTAAATCTGCTCAATATAATTGATCCAATTCATGGAGCTCTTGAACAAATTCAATCAAGTATTGAATTTCCTGAAATTGTAAAAATGGCATGTGATTATGTTGGGAGTCTTATTTCACCTTTTGGAGAAGATGAAGTGAACAATGAAGAAGTCATGCACAAGTACAAAAAGGCCAAGTAATGTTCCCTTTTAAAACTACTATATCATCATTTTTTTTTTTTGGTTCTACTACAAGGAGTTCCCACCGCCTTCGGCGAGGTAATCTCCCGTGGGAGTTTGCATGGGTACCTCGATGGGCAGCATCCCTCCCAGTTGAGATTTTTTCCATTCCCAAGGCTCGAACCCGAGACCTTGATTAAGGAGCAAGAGACCCTTAACCACTCATGCCAACCTCAATTGGTACTATATCATCATATTTAAAACTATGCTGGTGTACTTTTAAGTGATTAATTAATGTATTCATTCATTCTGCTTAATTAATTTCAGCGAAAACAGAATTCTTTTAAGACAGCAGCAACTGAAGAGGAAGAAGAAGAAAGATGGTAA

mRNA sequence

ATGGATGATAGCAGGCAAACCCTAGCAGTAGATTGTCTGTACAACACAGTGATGGAGGAAATACTGCCAAGACTCCAGGTAAAATCCCTAATTCGTTTCAAATCTGTTTGCAAGGATCGGCTGTTTACTATTTCTAAAGGTTCATTTGCAAAATCCCAGATTAAATTATGTATCCCCTCCCATCAAATTATCGTGTTAACCACTAGTCCGATTGAATCCATTAAACAACTTAATTCCTTTTACTTGTTAAACCGCGATGATGAACCCAGCGACCACCTGAAACAGTTGATGAATTTAGATGATGATGATTTCCATAATAATGTTCTAGACCTACTCATAGTGGGTACTTGTAAAGGTCTTGTATGCTTGTATTTCCGAGGAAAATGTGGTTTCTGCCGTATTTGGAATCCTGCTACGAATCAATATCGCGATATTGTTAATCCAGATGATCATCAAGGATGGGGGGTTCAATCTCATGGGTTCGGATATGTATCTTCTACTGATGATTACAAGATTGTTTCTTGGTCTACAAGTATTAAGGACTCTATAAAACGTCTTTATGTTTTTTCGTTGAAAGCTGGTAATTGGAAAAGTGTTTCTAGCCTTTTTAAAATGCGAATGCCTGATGGTATTGAAAAATCTGTGTTGGTTGATGAGAGTCGAAAACAGAATTCTTTTAAGACAGCAGCAACTGAAGAGGAAGAAGAAGAAAGATGGTAA

Coding sequence (CDS)

ATGGATGATAGCAGGCAAACCCTAGCAGTAGATTGTCTGTACAACACAGTGATGGAGGAAATACTGCCAAGACTCCAGGTAAAATCCCTAATTCGTTTCAAATCTGTTTGCAAGGATCGGCTGTTTACTATTTCTAAAGGTTCATTTGCAAAATCCCAGATTAAATTATGTATCCCCTCCCATCAAATTATCGTGTTAACCACTAGTCCGATTGAATCCATTAAACAACTTAATTCCTTTTACTTGTTAAACCGCGATGATGAACCCAGCGACCACCTGAAACAGTTGATGAATTTAGATGATGATGATTTCCATAATAATGTTCTAGACCTACTCATAGTGGGTACTTGTAAAGGTCTTGTATGCTTGTATTTCCGAGGAAAATGTGGTTTCTGCCGTATTTGGAATCCTGCTACGAATCAATATCGCGATATTGTTAATCCAGATGATCATCAAGGATGGGGGGTTCAATCTCATGGGTTCGGATATGTATCTTCTACTGATGATTACAAGATTGTTTCTTGGTCTACAAGTATTAAGGACTCTATAAAACGTCTTTATGTTTTTTCGTTGAAAGCTGGTAATTGGAAAAGTGTTTCTAGCCTTTTTAAAATGCGAATGCCTGATGGTATTGAAAAATCTGTGTTGGTTGATGAGAGTCGAAAACAGAATTCTTTTAAGACAGCAGCAACTGAAGAGGAAGAAGAAGAAAGATGGTAA

Protein sequence

MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIKDSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDESRKQNSFKTAATEEEEEERW

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23841	Spo23841	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23841.1	Spo23841.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23841.1.CDS.2	Spo23841.1.CDS.2	CDS
Spo23841.1.CDS.1	Spo23841.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23841.1.exon.2	Spo23841.1.exon.2	exon
Spo23841.1.exon.1	Spo23841.1.exon.1	exon

Homology

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BLAST of Spo23841.1 vs. NCBI nr
Match: gi|902207685|gb|KNA15761.1| (hypothetical protein SOVF_095260 [Spinacia oleracea])

HSP 1 Score: 446.8 bits (1148), Expect = 2.400e-122
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 1


		  
Query: 1   MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPS 60
           MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKD LFTISKGSFAKSQIKLCIPS
Sbjct: 1   MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDWLFTISKGSFAKSQIKLCIPS 60

Query: 61  HQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGL 120
           HQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGL
Sbjct: 61  HQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGL 120

Query: 121 VCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIK 180
           VCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIK
Sbjct: 121 VCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIK 180

Query: 181 DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES 221
           DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES
Sbjct: 181 DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES 220

[Close]

BLAST of Spo23841.1 vs. NCBI nr
Match: gi|902153564|gb|KNA05717.1| (hypothetical protein SOVF_187030 isoform B [Spinacia oleracea])

HSP 1 Score: 119.4 bits (298), Expect = 8.600e-24
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1


		  
Query: 3   DSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQ 62
           DS QTL ++   + ++EEIL RL VKSLIRFKSVCK  L  IS   FAKS +K  +   Q
Sbjct: 19  DSTQTLTLNLPDHILIEEILARLPVKSLIRFKSVCKYWLSIISSRKFAKSHLKFSVLRLQ 78

Query: 63  IIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLD---DDDFHNNVLDLLIVGTCKG 122
            + L     +   + N    L+   + S  +K L+ L     +DF       ++VG+C G
Sbjct: 79  FLFLPYCH-DYCGKGNGGNFLSLPYKESCSVKDLVRLGCGYIEDFP------VLVGSCHG 138

Query: 123 LVCL----YFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSW 182
           L+C+     + GK G   +WNPAT ++R+I NPD+     V+++GFGYVSS DDYKI S 
Sbjct: 139 LICVCDKEEYAGKFG---LWNPATEEHREITNPDNIP--DVKAYGFGYVSSIDDYKIAST 198

Query: 183 STSIKDSIKRLYVFSLKAGNWKSVSSLF 204
             +     +  YVFS + G WK +   F
Sbjct: 199 FATRSGKFRGFYVFSARNGKWKRIVGKF 214

[Close]

BLAST of Spo23841.1 vs. NCBI nr
Match: gi|902153563|gb|KNA05716.1| (hypothetical protein SOVF_187030 isoform A [Spinacia oleracea])

HSP 1 Score: 119.4 bits (298), Expect = 8.600e-24
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1


		  
Query: 3   DSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQ 62
           DS QTL ++   + ++EEIL RL VKSLIRFKSVCK  L  IS   FAKS +K  +   Q
Sbjct: 19  DSTQTLTLNLPDHILIEEILARLPVKSLIRFKSVCKYWLSIISSRKFAKSHLKFSVLRLQ 78

Query: 63  IIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLD---DDDFHNNVLDLLIVGTCKG 122
            + L     +   + N    L+   + S  +K L+ L     +DF       ++VG+C G
Sbjct: 79  FLFLPYCH-DYCGKGNGGNFLSLPYKESCSVKDLVRLGCGYIEDFP------VLVGSCHG 138

Query: 123 LVCL----YFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSW 182
           L+C+     + GK G   +WNPAT ++R+I NPD+     V+++GFGYVSS DDYKI S 
Sbjct: 139 LICVCDKEEYAGKFG---LWNPATEEHREITNPDNIP--DVKAYGFGYVSSIDDYKIAST 198

Query: 183 STSIKDSIKRLYVFSLKAGNWKSVSSLF 204
             +     +  YVFS + G WK +   F
Sbjct: 199 FATRSGKFRGFYVFSARNGKWKRIVGKF 214

[Close]

BLAST of Spo23841.1 vs. NCBI nr
Match: gi|902195583|gb|KNA12883.1| (hypothetical protein SOVF_121230 [Spinacia oleracea])

HSP 1 Score: 105.9 bits (263), Expect = 9.800e-20
Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 1


		  
Query: 17  VMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIVLTTSPIESIKQ 76
           + E ILPR  VKSLI FKSVCK     IS   FAKSQ++    S   ++ T         
Sbjct: 16  IFEHILPRFPVKSLIGFKSVCKTWYNLISTIEFAKSQLQFSSSSPNFMISTFCSGRD--- 75

Query: 77  LNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCLYFRGKC---GFCR 136
               YLL+  DE + +LK+L+ L D  F N +    +VG C GLVCL+F        +  
Sbjct: 76  -GELYLLSY-DEHNGNLKELVQL-DTQFTNTMGKANLVGCCNGLVCLFFDDDAYCIEYFT 135

Query: 137 IWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVS--WSTSIKDSIKRLYVFSL 196
           +WNPAT+++R I  P   +   +   GFGY  + DDYKIV+  +S    +S  +++VFSL
Sbjct: 136 VWNPATHKHRRIRPPSRER---LCKCGFGYTIALDDYKIVAAFFSYGGDESSTQIWVFSL 194

Query: 197 KAGNWKSV 200
           + G WK +
Sbjct: 196 QIGKWKQI 194

[Close]

BLAST of Spo23841.1 vs. NCBI nr
Match: gi|731354996|ref|XP_010688903.1| (PREDICTED: F-box/kelch-repeat protein At3g23880-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 105.1 bits (261), Expect = 1.700e-19
Identity = 79/203 (38.92%), Postives = 103/203 (50.74%), Query Frame = 1


		  
Query: 6   QTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIV 65
           QT+      + +MEEILPRL VK LI FK V K     IS  +FAKS +K          
Sbjct: 40  QTITPTLPDHILMEEILPRLPVKHLITFKLVSKQWNHVISSYTFAKSHLKFAYFLLDQFF 99

Query: 66  LTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCLYF 125
           L           + F+ L R +E S  + +L+ +D      + +   +VG C GLVC  +
Sbjct: 100 LINPRSNLFCDWDHFFYLLRYNESSS-VNELVGID---VSVSFMFPTLVGCCNGLVCFTY 159

Query: 126 ---RGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQ---SHGFGYVSSTDDYKIVSWSTSI 185
              R  C FC +WNPAT + RDI NP      GV    ++GFGYVSS DDYKI S   S 
Sbjct: 160 QKDRTSC-FC-LWNPATRKCRDISNPG-----GVMFALAYGFGYVSSIDDYKIFSSFGSK 219

Query: 186 KDSIKRLYVFSLKAGNWKSVSSL 203
            D     +VFS K G W+S++ L
Sbjct: 220 TDQFPAFFVFSWKEGKWRSINGL 231

[Close]

BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8E9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_095260 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.600e-122
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 1


		  
Query: 1   MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPS 60
           MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKD LFTISKGSFAKSQIKLCIPS
Sbjct: 1   MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDWLFTISKGSFAKSQIKLCIPS 60

Query: 61  HQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGL 120
           HQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGL
Sbjct: 61  HQIIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGL 120

Query: 121 VCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIK 180
           VCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIK
Sbjct: 121 VCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIK 180

Query: 181 DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES 221
           DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES
Sbjct: 181 DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES 220

[Close]

BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEM2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187030 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.000e-24
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1


		  
Query: 3   DSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQ 62
           DS QTL ++   + ++EEIL RL VKSLIRFKSVCK  L  IS   FAKS +K  +   Q
Sbjct: 19  DSTQTLTLNLPDHILIEEILARLPVKSLIRFKSVCKYWLSIISSRKFAKSHLKFSVLRLQ 78

Query: 63  IIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLD---DDDFHNNVLDLLIVGTCKG 122
            + L     +   + N    L+   + S  +K L+ L     +DF       ++VG+C G
Sbjct: 79  FLFLPYCH-DYCGKGNGGNFLSLPYKESCSVKDLVRLGCGYIEDFP------VLVGSCHG 138

Query: 123 LVCL----YFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSW 182
           L+C+     + GK G   +WNPAT ++R+I NPD+     V+++GFGYVSS DDYKI S 
Sbjct: 139 LICVCDKEEYAGKFG---LWNPATEEHREITNPDNIP--DVKAYGFGYVSSIDDYKIAST 198

Query: 183 STSIKDSIKRLYVFSLKAGNWKSVSSLF 204
             +     +  YVFS + G WK +   F
Sbjct: 199 FATRSGKFRGFYVFSARNGKWKRIVGKF 214

[Close]

BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGN5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187030 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.000e-24
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 1


		  
Query: 3   DSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQ 62
           DS QTL ++   + ++EEIL RL VKSLIRFKSVCK  L  IS   FAKS +K  +   Q
Sbjct: 19  DSTQTLTLNLPDHILIEEILARLPVKSLIRFKSVCKYWLSIISSRKFAKSHLKFSVLRLQ 78

Query: 63  IIVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLD---DDDFHNNVLDLLIVGTCKG 122
            + L     +   + N    L+   + S  +K L+ L     +DF       ++VG+C G
Sbjct: 79  FLFLPYCH-DYCGKGNGGNFLSLPYKESCSVKDLVRLGCGYIEDFP------VLVGSCHG 138

Query: 123 LVCL----YFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSW 182
           L+C+     + GK G   +WNPAT ++R+I NPD+     V+++GFGYVSS DDYKI S 
Sbjct: 139 LICVCDKEEYAGKFG---LWNPATEEHREITNPDNIP--DVKAYGFGYVSSIDDYKIAST 198

Query: 183 STSIKDSIKRLYVFSLKAGNWKSVSSLF 204
             +     +  YVFS + G WK +   F
Sbjct: 199 FATRSGKFRGFYVFSARNGKWKRIVGKF 214

[Close]

BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R046_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_121230 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 6.900e-20
Identity = 73/188 (38.83%), Postives = 102/188 (54.26%), Query Frame = 1


		  
Query: 17  VMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIVLTTSPIESIKQ 76
           + E ILPR  VKSLI FKSVCK     IS   FAKSQ++    S   ++ T         
Sbjct: 16  IFEHILPRFPVKSLIGFKSVCKTWYNLISTIEFAKSQLQFSSSSPNFMISTFCSGRD--- 75

Query: 77  LNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCLYFRGKC---GFCR 136
               YLL+  DE + +LK+L+ L D  F N +    +VG C GLVCL+F        +  
Sbjct: 76  -GELYLLSY-DEHNGNLKELVQL-DTQFTNTMGKANLVGCCNGLVCLFFDDDAYCIEYFT 135

Query: 137 IWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIVS--WSTSIKDSIKRLYVFSL 196
           +WNPAT+++R I  P   +   +   GFGY  + DDYKIV+  +S    +S  +++VFSL
Sbjct: 136 VWNPATHKHRRIRPPSRER---LCKCGFGYTIALDDYKIVAAFFSYGGDESSTQIWVFSL 194

Query: 197 KAGNWKSV 200
           + G WK +
Sbjct: 196 QIGKWKQI 194

[Close]

BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BM56_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g204180 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.200e-19
Identity = 79/203 (38.92%), Postives = 103/203 (50.74%), Query Frame = 1


		  
Query: 6   QTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIV 65
           QT+      + +MEEILPRL VK LI FK V K     IS  +FAKS +K          
Sbjct: 40  QTITPTLPDHILMEEILPRLPVKHLITFKLVSKQWNHVISSYTFAKSHLKFAYFLLDQFF 99

Query: 66  LTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCLYF 125
           L           + F+ L R +E S  + +L+ +D      + +   +VG C GLVC  +
Sbjct: 100 LINPRSNLFCDWDHFFYLLRYNESSS-VNELVGID---VSVSFMFPTLVGCCNGLVCFTY 159

Query: 126 ---RGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQ---SHGFGYVSSTDDYKIVSWSTSI 185
              R  C FC +WNPAT + RDI NP      GV    ++GFGYVSS DDYKI S   S 
Sbjct: 160 QKDRTSC-FC-LWNPATRKCRDISNPG-----GVMFALAYGFGYVSSIDDYKIFSSFGSK 219

Query: 186 KDSIKRLYVFSLKAGNWKSVSSL 203
            D     +VFS K G W+S++ L
Sbjct: 220 TDQFPAFFVFSWKEGKWRSINGL 231

[Close]

BLAST of Spo23841.1 vs. ExPASy Swiss-Prot
Match: FBK67_ARATH (F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana GN=At3g23880 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.200e-9
Identity = 68/216 (31.48%), Postives = 93/216 (43.06%), Query Frame = 1


		  
Query: 17  VMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIVLTTSPIESIKQ 76
           +MEEIL RL VKSL RFK VC      IS+  FA          H +I+ T+    S K 
Sbjct: 18  MMEEILLRLPVKSLTRFKCVCSSWRSLISETLFAL--------KHALILETSKATTSTKS 77

Query: 77  LNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLL------IVGTCKGLVCLYFRGKCG 136
                  +R    S  +  L N        +  +LL      +VGTC GLVC +      
Sbjct: 78  PYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKS 137

Query: 137 FCRIWNPATN-QYR----DIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIKDSIKR 196
              +WNP    Q R    D+   DD     V ++GFGY  S DDYK+V+           
Sbjct: 138 L-YLWNPTIKLQQRLSSSDLETSDDE---CVVTYGFGYDESEDDYKVVALLQQRHQVKIE 197

Query: 197 LYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDESR 222
             ++S +   W+S +S      P G+   V+ D+SR
Sbjct: 198 TKIYSTRQKLWRSNTS-----FPSGV---VVADKSR 213

[Close]

BLAST of Spo23841.1 vs. TAIR (Arabidopsis)
Match: AT3G23880.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.800e-11
Identity = 68/216 (31.48%), Postives = 93/216 (43.06%), Query Frame = 1


		  
Query: 17  VMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIVLTTSPIESIKQ 76
           +MEEIL RL VKSL RFK VC      IS+  FA          H +I+ T+    S K 
Sbjct: 18  MMEEILLRLPVKSLTRFKCVCSSWRSLISETLFAL--------KHALILETSKATTSTKS 77

Query: 77  LNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLL------IVGTCKGLVCLYFRGKCG 136
                  +R    S  +  L N        +  +LL      +VGTC GLVC +      
Sbjct: 78  PYGVITTSRYHLKSCCIHSLYNASTVYVSEHDGELLGRDYYQVVGTCHGLVCFHVDYDKS 137

Query: 137 FCRIWNPATN-QYR----DIVNPDDHQGWGVQSHGFGYVSSTDDYKIVSWSTSIKDSIKR 196
              +WNP    Q R    D+   DD     V ++GFGY  S DDYK+V+           
Sbjct: 138 L-YLWNPTIKLQQRLSSSDLETSDDE---CVVTYGFGYDESEDDYKVVALLQQRHQVKIE 197

Query: 197 LYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDESR 222
             ++S +   W+S +S      P G+   V+ D+SR
Sbjct: 198 TKIYSTRQKLWRSNTS-----FPSGV---VVADKSR 213

[Close]

BLAST of Spo23841.1 vs. TAIR (Arabidopsis)
Match: AT1G33530.1 (F-box family protein)

HSP 1 Score: 48.9 bits (115), Expect = 5.000e-6
Identity = 48/170 (28.24%), Postives = 73/170 (42.94%), Query Frame = 1


		  
Query: 4   SRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQI 63
           S  TLAV+ L + ++EEIL RL VK L+R KS+ K     I     A+  ++L    + +
Sbjct: 89  SETTLAVE-LPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGL 148

Query: 64  IVLTTSPIESIKQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCL 123
             +  +   S  +       +R           +N D DD       L + G+C GLVC+
Sbjct: 149 KEIKITVERSTSKSICIKFFSRRSG-----MNAINSDSDDL------LRVPGSCNGLVCV 208

Query: 124 YFRGKCGFCRIWNPATNQYRDIVNPDDHQGWGVQSHGFGYVSSTDDYKIV 174
           Y      +  + NP T   R +  P   +     S GFG    T  YK++
Sbjct: 209 YELDSV-YIYLLNPMTGVTRTLTPPRGTK----LSVGFGIDVVTGTYKVM 241

[Close]

BLAST of Spo23841.1 vs. TAIR (Arabidopsis)
Match: AT3G06240.1 (F-box family protein)

HSP 1 Score: 48.5 bits (114), Expect = 6.600e-6
Identity = 51/193 (26.42%), Postives = 89/193 (46.11%), Query Frame = 1


		  
Query: 18  MEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPSHQIIVLTTSPIESIKQL 77
           ++ IL    V+SL R   V    L+++   S       L    H        P++    +
Sbjct: 77  LDLILRNESVRSLHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNY------PLKDDPSI 136

Query: 78  NSFYLLNR-DDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKGLVCLYFRGKCGFCRIWN 137
            S  + N   D   D  + ++ L+   +  N ++  IVG+  GLVC+   G+ G   ++N
Sbjct: 137 FSEMIRNYVGDHLYDDRRVMLKLNAKSYRRNWVE--IVGSSNGLVCIS-PGE-GAVFLYN 196

Query: 138 PATNQYRDIVNPDDHQGWGV-------QSHGFGYVSSTDDYKIVSWSTSIKDSIKRLYVF 197
           P T   + +  P++ +   V       Q++GFG+   TDDYK+V    + +D I    V+
Sbjct: 197 PTTGDSKRL--PENFRPKSVEYERDNFQTYGFGFDGLTDDYKLVKLVATSED-ILDASVY 256

Query: 198 SLKAGNWKSVSSL 203
           SLKA +W+ + +L
Sbjct: 257 SLKADSWRRICNL 256

[Close]

BLAST of Spo23841.1 vs. TAIR (Arabidopsis)
Match: AT1G09650.1 (F-box and associated interaction domains-containing protein)

HSP 1 Score: 48.1 bits (113), Expect = 8.600e-6
Identity = 63/236 (26.69%), Postives = 93/236 (39.41%), Query Frame = 1


		  
Query: 1   MDDSRQTLAVDCLYNTVMEEILPRLQVKSLIRFKSVCKDRLFTISKGSFAKSQIKLCIPS 60
           M   ++ L ++ L + V+E IL RL    L+RFK+V K    TI    F + Q      S
Sbjct: 1   MSKKQRCLMMESLPHEVVECILERLDADPLLRFKAVSKQWKSTIESPFFQRRQFTQRQQS 60

Query: 61  HQIIVLTTSPIESI-KQLNSFYLLNRDDEPSDHLKQLMNLDDDDFHNNVLDLLIVGTCKG 120
               VL  S    I  ++ +   L      S  +      ++++     +      +C G
Sbjct: 61  GNPDVLMVSRCADINSEIEALTTLVLGSSSSVKIPTPWEEEEEEDKEYSVS---QDSCDG 120

Query: 121 LVCLYFRGKCGFCRIWNPATNQYRDIVNPDDHQ------------GWGVQSHGFGYVSST 180
           LVCL+ + K GF  ++NPAT  Y  +      Q            G+ V   GFG    T
Sbjct: 121 LVCLFDKFKSGF--VFNPATRWYHPLPLCQLQQLLIAIGDGFYDLGYRVSRLGFGKDKLT 180

Query: 181 DDYKIVSWSTSIK---DSIKRLYVFSLKAGNWKSVSSLFKMRMPDGIEKSVLVDES 221
             YK V    SI+   ++     VF      W+ VS     R+  G    V VD S
Sbjct: 181 GTYKPVWLYNSIEIGLENATTCEVFDFSTNAWRYVSPAAPYRIV-GCPAPVCVDGS 230

The following BLAST results are available for this feature:

BLAST of Spo23841.1 vs. NCBI nr
BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
BLAST of Spo23841.1 vs. ExPASy Swiss-Prot
BLAST of Spo23841.1 vs. TAIR (Arabidopsis)

BLAST of Spo23841.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902207685\|gb\|KNA15761.1\|	2.4e-122	99.5	hypothetical protein SOVF_0952...	[more]
gi\|902153564\|gb\|KNA05717.1\|	8.6e-24	39.4	hypothetical protein SOVF_1870...	[more]
gi\|902153563\|gb\|KNA05716.1\|	8.6e-24	39.4	hypothetical protein SOVF_1870...	[more]
gi\|902195583\|gb\|KNA12883.1\|	9.8e-20	38.8	hypothetical protein SOVF_1212...	[more]
gi\|731354996\|ref\|XP_010688903.1\|	1.7e-19	38.9	PREDICTED: F-box/kelch-repeat ...	[more]

BLAST of Spo23841.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R8E9_SPIOL	1.6e-122	99.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9QEM2_SPIOL	6.0e-24	39.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9QGN5_SPIOL	6.0e-24	39.4	Uncharacterized protein OS=Spi...	[more]
A0A0K9R046_SPIOL	6.9e-20	38.8	Uncharacterized protein OS=Spi...	[more]
A0A0J8BM56_BETVU	1.2e-19	38.9	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo23841.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
FBK67_ARATH	1.2e-9	31.4	F-box/kelch-repeat protein At3...	[more]

BLAST of Spo23841.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G23880.1	6.8e-11	31.4	F-box and associated interacti...	[more]
AT1G33530.1	5.0e-6	28.2	F-box family protein	[more]
AT3G06240.1	6.6e-6	26.4	F-box family protein	[more]
AT1G09650.1	8.6e-6	26.6	F-box and associated interacti...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 115..202 score: 2.1
None	No IPR available	PANTHER	PTHR31790	FAMILY NOT NAMED	coord: 17..197 score: 6.7
None	No IPR available	PANTHER	PTHR31790:SF15	SUBFAMILY NOT NAMED	coord: 17..197 score: 6.7