Spo23917.1 (mRNA) | SpinachBase

Overview


Name	Spo23917.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	DnaJ/Hsp40 cysteine-rich domain superfamily protein
Location	Super_scaffold_96 : 178802 .. 181184 (+)
Sequence length	999

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACCCCACCAACTATGATGGTTACAACAAACCAGCACCACAGAAAACCCAAATAAAAATAGTTGTGTTTCTTCTCTCATCTTTTGCCTATGGCTAGGAACGAAGAACCCAAGTAATCAAACAAAACTGCAAAATTGGTGAAGAAATGGTAACACCAGCAACTTCTGGGCTTCATTCTCCATTTGTTTGTTCATCTCGCAAACTATCTGCGTTCAACTCTTCTTCCATTTTACCCTCTAAATTACCAAGAAATCAACGCTCACCAACTTCTTATCCATGCATTCGAGCTGCTGATCTTGATCAAAACACAGTATGTAATTTAATTATAAATCCCTCTAATTAATCAAATTAATATTCAATTTGATTTGTAATAATAATGCTATTTGTTTTTTGCAGATAGTAGCAATTTCAGTTGGAGTTGTGAGTGTTGCCATTGGGATTGGCATTCCTGTTTTTTATGAAACACAAATTAACAATGCTGTAAGTCTTTTTTGTTTTGTTTTGTTTGGTTAATTTAAAGTGTTTAATAGAAGTATAAAATACCACTTGTGCTCTGTAATCAAGTTACTCAATGGTAAGCTCATTATTTTAGAGTGATGATTAAGTCATTATTACCCGATTCGCTAGTATCAGATTGGTACGAGTTTGCAGTTCGTTGCCTAATTTGCATTTTCATGTTATAATTGGCCTTTTTGTGGAGTGATTAAGGAATGAGGTAACATTGAGTTACTAGAGTGGGAGTCACATTGGTTTCTTAAGAGCGACACCTATTTAGGAACGTATGAAGTTAGTTAAAGCGACAAATATTTAGGAACGTATGAAGTTAGTTAAAGCGACAAATATTTAGGAACGTATGAAGTTAGTTAAAGCGACAAATATTTAGGAACGGGGGAGCATCAGGGCATACATCAGTTAAACTTCATACGGAGCATTACTTTGTAGTCAATTTTCGTTTGCTATTTTCAAATTATAATCTGCAGATGTTTGTACCATTACTTATGTTTGTAAATTCAATTCACATAATTTCTTGTTCAGACTTACAAGTTGATGTTGTTCATCAAATAGGCCGAGTTCGATTCTCAAGTTATTTTCTAAATAAAATTTTCAGTTCAGTTGAAAAATGGAAAGATAACAACAACAAATCTAGGGAGAAAAACACAAGGTTCTTCGAGTAATTTGCGATTATAAGCACAATCCCTCTTTTTTTTCGTGTTTTGTCTGTGAATGCGCAAGAAAACAGAAATGGGGCGTGTTATTTTGACATTATGAGATTGAATATGATGGCTTGTTTGTTGTAGGCAAAGCGAGAGAACACACAACCTTGCTTTCCATGCAACGGCTCTGGAGCTCGTAAGTCTCCCTCCCTCCCTCCATCACTATTGTTTTTGATATTTGTAGAAACTCTAGTTTCATTGCAGCCTGTAATGCAAGATCAGTTCCTTATTTTCTACTTGGTACTAGACAGTAGACCATGTATTTCAAATTGAGGTGTAAAAAGATGGAAAAGAGCAACTACTATAAATGATTAAATGGTACTTCAGTGTAAATCACAGCATACTTGGTACTGAAATTTCTGGCAATGTGTTGTTGATTAATGACTATGCAAAACTTGGGATACTATACTTGGACAAAGTAAAGCATATCACAGTTAGAACATTCAATAGATAGTGATCATGTATAAGTTGTTCAAGCTAAGGATATATTTCCTTCCCTAGAGAAATGCAGGTTCTGCGCAGGGACGGGCAATGTGACAGTAGATCTTGGTGGGGATGAGAAAGAAGTTTCTAAATGTATCAACTGTGATGCCCTTGGTTCTCTAACATGCACTACATGTCAAGGCTCAGGAATTCAACCTAGGTATCTTGACCGAAGGTATGCTTTTTAGTTTTTACAATCATCAAACCTTTCCACCTTACAAAATTAAGTTTCTCCACAAGTTACAATAGTTCAGATCTGAACAATTTGCCGCGTTTTTCTTGGTAATCAGGGAATTCAAAGATGACGACTAAACATCTTTGCACGGCGGATATTCAACATAAGGATCGAACCAGAGTCGGGCAGTTAATCTTGTCTTGCCAAATACCATAGATTTTTTTGTAATATGTTATACCTATTCTAACAGCATTTTTCTTCAACCTGGAAATACTTGTCAATCTTCTCATTCGATTTATCGATTAATGAACTCATTATGTTTCCCTTGTAAATCAAAAAGTTTGTCATTTTTGATGTTGTTAATCCCTGCACCATTTTGTTTCCTCTTTGTGTATACCATTGAGTGATGTTAATCACAGGTCATAGCCCCAGTAAAAGCGATCATCCCTCATTTATCATATCAAAAAACTATGTACAAAATGAGATATGATTTACTTACTTGGGATAAGAA

mRNA sequence

TGACCCCACCAACTATGATGGTTACAACAAACCAGCACCACAGAAAACCCAAATAAAAATAGTTGTGTTTCTTCTCTCATCTTTTGCCTATGGCTAGGAACGAAGAACCCAAGTAATCAAACAAAACTGCAAAATTGGTGAAGAAATGGTAACACCAGCAACTTCTGGGCTTCATTCTCCATTTGTTTGTTCATCTCGCAAACTATCTGCGTTCAACTCTTCTTCCATTTTACCCTCTAAATTACCAAGAAATCAACGCTCACCAACTTCTTATCCATGCATTCGAGCTGCTGATCTTGATCAAAACACAATAGTAGCAATTTCAGTTGGAGTTGTGAGTGTTGCCATTGGGATTGGCATTCCTGTTTTTTATGAAACACAAATTAACAATGCTGCAAAGCGAGAGAACACACAACCTTGCTTTCCATGCAACGGCTCTGGAGCTCAGAAATGCAGGTTCTGCGCAGGGACGGGCAATGTGACAGTAGATCTTGGTGGGGATGAGAAAGAAGTTTCTAAATGTATCAACTGTGATGCCCTTGGTTCTCTAACATGCACTACATGTCAAGGCTCAGGAATTCAACCTAGGTATCTTGACCGAAGGGAATTCAAAGATGACGACTAAACATCTTTGCACGGCGGATATTCAACATAAGGATCGAACCAGAGTCGGGCAGTTAATCTTGTCTTGCCAAATACCATAGATTTTTTTGTAATATGTTATACCTATTCTAACAGCATTTTTCTTCAACCTGGAAATACTTGTCAATCTTCTCATTCGATTTATCGATTAATGAACTCATTATGTTTCCCTTGTAAATCAAAAAGTTTGTCATTTTTGATGTTGTTAATCCCTGCACCATTTTGTTTCCTCTTTGTGTATACCATTGAGTGATGTTAATCACAGGTCATAGCCCCAGTAAAAGCGATCATCCCTCATTTATCATATCAAAAAACTATGTACAAAATGAGATATGATTTACTTACTTGGGATAAGAA

Coding sequence (CDS)

ATGGTAACACCAGCAACTTCTGGGCTTCATTCTCCATTTGTTTGTTCATCTCGCAAACTATCTGCGTTCAACTCTTCTTCCATTTTACCCTCTAAATTACCAAGAAATCAACGCTCACCAACTTCTTATCCATGCATTCGAGCTGCTGATCTTGATCAAAACACAATAGTAGCAATTTCAGTTGGAGTTGTGAGTGTTGCCATTGGGATTGGCATTCCTGTTTTTTATGAAACACAAATTAACAATGCTGCAAAGCGAGAGAACACACAACCTTGCTTTCCATGCAACGGCTCTGGAGCTCAGAAATGCAGGTTCTGCGCAGGGACGGGCAATGTGACAGTAGATCTTGGTGGGGATGAGAAAGAAGTTTCTAAATGTATCAACTGTGATGCCCTTGGTTCTCTAACATGCACTACATGTCAAGGCTCAGGAATTCAACCTAGGTATCTTGACCGAAGGGAATTCAAAGATGACGACTAA

Protein sequence

MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISVGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEKEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23917	Spo23917	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23917.1	Spo23917.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23917.1.exon.1	Spo23917.1.exon.1	exon
Spo23917.1.exon.2	Spo23917.1.exon.2	exon
Spo23917.1.exon.3	Spo23917.1.exon.3	exon
Spo23917.1.exon.4	Spo23917.1.exon.4	exon
Spo23917.1.exon.5	Spo23917.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23917.1.utr5p.1	Spo23917.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23917.1.CDS.1	Spo23917.1.CDS.1	CDS
Spo23917.1.CDS.2	Spo23917.1.CDS.2	CDS
Spo23917.1.CDS.3	Spo23917.1.CDS.3	CDS
Spo23917.1.CDS.4	Spo23917.1.CDS.4	CDS
Spo23917.1.CDS.5	Spo23917.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23917.1.utr3p.1	Spo23917.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo23917.1 vs. NCBI nr
Match: gi|902178145|gb|KNA09077.1| (hypothetical protein SOVF_156870 [Spinacia oleracea])

HSP 1 Score: 325.9 bits (834), Expect = 4.000e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

		  
Query: 1   MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS 60
           MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS
Sbjct: 1   MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS 60

Query: 61  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 120
           VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE
Sbjct: 61  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 120

Query: 121 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of Spo23917.1 vs. NCBI nr
Match: gi|802607462|ref|XP_012073817.1| (PREDICTED: protein SPA, chloroplastic [Jatropha curcas])

HSP 1 Score: 266.9 bits (681), Expect = 2.200e-68
Identity = 128/158 (81.01%), Postives = 141/158 (89.24%), Query Frame = 1

		  
Query: 2   VTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISV 61
           V P+ S  HSPF+C   KLS+F++SS+   K  RNQR P SYPCIRA +LDQNTIVAI+V
Sbjct: 3   VAPSISRFHSPFLCCPFKLSSFSASSVHFVKSARNQRFPASYPCIRAVELDQNTIVAITV 62

Query: 62  GVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEK 121
           GVVSVAIGIGIPVFYETQI+NAAKRENTQPCFPCNGSGAQKCRFC GTG+VTV+LGGDEK
Sbjct: 63  GVVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCNGSGAQKCRFCLGTGSVTVELGGDEK 122

Query: 122 EVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           EVS+CINCD +GSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 123 EVSRCINCDGVGSLTCTTCQGSGIQPRYLDRREFKDDD 160

[Close]

BLAST of Spo23917.1 vs. NCBI nr
Match: gi|731334397|ref|XP_010678205.1| (PREDICTED: protein disulfide-isomerase LQY1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 264.6 bits (675), Expect = 1.100e-67
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1

		  
Query: 3   TPATSGLHSPFVCSSRKLSAFNSSSILP-SKLPRNQRSPTS-YPCIRAADLDQNTIVAIS 62
           T A   L SPFVCS+RKLSAFNSSS L  + L RN RSPT+ YPCIRA DLDQNTIVAIS
Sbjct: 8   TAAIPALQSPFVCSTRKLSAFNSSSSLSHATLLRNPRSPTTTYPCIRAIDLDQNTIVAIS 67

Query: 63  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 122
           VG VSVAIGIGIPVFYETQI++AAKR+NTQPCFPC GSGAQ+CRFC GTGNVTV+LGGDE
Sbjct: 68  VGFVSVAIGIGIPVFYETQIDSAAKRDNTQPCFPCTGSGAQRCRFCLGTGNVTVELGGDE 127

Query: 123 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           KEVSKCINCD LG+LTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 128 KEVSKCINCDGLGTLTCTTCQGSGIQPRYLDRREFKDDD 166

[Close]

BLAST of Spo23917.1 vs. NCBI nr
Match: gi|661888966|emb|CDP07409.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 254.2 bits (648), Expect = 1.500e-64
Identity = 119/158 (75.32%), Postives = 140/158 (88.61%), Query Frame = 1

		  
Query: 2   VTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISV 61
           +TP+ S LHSPF+C   K+S+ +SS +L  K  RN+R PTSYPCIRA +LDQNTIVAI+V
Sbjct: 3   ITPSVSRLHSPFICCPLKISS-SSSGLLTQKSIRNRRCPTSYPCIRAIELDQNTIVAITV 62

Query: 62  GVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEK 121
           GV S+A+GIGIPVFYETQI++AAKRENTQPCFPCNGSGAQ CRFC GTG+V+V+LGG +K
Sbjct: 63  GVASIAVGIGIPVFYETQIDSAAKRENTQPCFPCNGSGAQTCRFCMGTGSVSVELGGGDK 122

Query: 122 EVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           EVS+CINC+ +GSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 123 EVSRCINCEGMGSLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of Spo23917.1 vs. NCBI nr
Match: gi|743851436|ref|XP_011028995.1| (PREDICTED: protein disulfide-isomerase LQY1-like [Populus euphratica])

HSP 1 Score: 253.4 bits (646), Expect = 2.500e-64
Identity = 122/158 (77.22%), Postives = 137/158 (86.71%), Query Frame = 1

		  
Query: 2   VTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISV 61
           V P+   LHSPF+C      +F+ SS   ++   +QRSP SYPCIRA DLDQNTIVAISV
Sbjct: 3   VAPSIPRLHSPFLCCPLNNISFSLSSFKSAR-HHHQRSPVSYPCIRAIDLDQNTIVAISV 62

Query: 62  GVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEK 121
           GVVS+A+GIGIPVFYE+QI+NAAKR+NTQPCFPCNGSGAQKCRFC GTG+VTV+LGGDEK
Sbjct: 63  GVVSIAVGIGIPVFYESQIDNAAKRDNTQPCFPCNGSGAQKCRFCLGTGSVTVELGGDEK 122

Query: 122 EVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           EVS+CINCD LGSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 123 EVSRCINCDGLGSLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPA2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_156870 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 2.800e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

		  
Query: 1   MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS 60
           MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS
Sbjct: 1   MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS 60

Query: 61  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 120
           VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE
Sbjct: 61  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 120

Query: 121 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
Match: A0A067KLC7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08228 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.500e-68
Identity = 128/158 (81.01%), Postives = 141/158 (89.24%), Query Frame = 1

		  
Query: 2   VTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISV 61
           V P+ S  HSPF+C   KLS+F++SS+   K  RNQR P SYPCIRA +LDQNTIVAI+V
Sbjct: 3   VAPSISRFHSPFLCCPFKLSSFSASSVHFVKSARNQRFPASYPCIRAVELDQNTIVAITV 62

Query: 62  GVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEK 121
           GVVSVAIGIGIPVFYETQI+NAAKRENTQPCFPCNGSGAQKCRFC GTG+VTV+LGGDEK
Sbjct: 63  GVVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCNGSGAQKCRFCLGTGSVTVELGGDEK 122

Query: 122 EVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           EVS+CINCD +GSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 123 EVSRCINCDGVGSLTCTTCQGSGIQPRYLDRREFKDDD 160

[Close]

BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB64_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g112450 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 7.700e-68
Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1

		  
Query: 3   TPATSGLHSPFVCSSRKLSAFNSSSILP-SKLPRNQRSPTS-YPCIRAADLDQNTIVAIS 62
           T A   L SPFVCS+RKLSAFNSSS L  + L RN RSPT+ YPCIRA DLDQNTIVAIS
Sbjct: 8   TAAIPALQSPFVCSTRKLSAFNSSSSLSHATLLRNPRSPTTTYPCIRAIDLDQNTIVAIS 67

Query: 63  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 122
           VG VSVAIGIGIPVFYETQI++AAKR+NTQPCFPC GSGAQ+CRFC GTGNVTV+LGGDE
Sbjct: 68  VGFVSVAIGIGIPVFYETQIDSAAKRDNTQPCFPCTGSGAQRCRFCLGTGNVTVELGGDE 127

Query: 123 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           KEVSKCINCD LG+LTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 128 KEVSKCINCDGLGTLTCTTCQGSGIQPRYLDRREFKDDD 166

[Close]

BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
Match: A0A068UGS0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024666001 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.000e-64
Identity = 119/158 (75.32%), Postives = 140/158 (88.61%), Query Frame = 1

		  
Query: 2   VTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISV 61
           +TP+ S LHSPF+C   K+S+ +SS +L  K  RN+R PTSYPCIRA +LDQNTIVAI+V
Sbjct: 3   ITPSVSRLHSPFICCPLKISS-SSSGLLTQKSIRNRRCPTSYPCIRAIELDQNTIVAITV 62

Query: 62  GVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEK 121
           GV S+A+GIGIPVFYETQI++AAKRENTQPCFPCNGSGAQ CRFC GTG+V+V+LGG +K
Sbjct: 63  GVASIAVGIGIPVFYETQIDSAAKRENTQPCFPCNGSGAQTCRFCMGTGSVSVELGGGDK 122

Query: 122 EVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           EVS+CINC+ +GSLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 123 EVSRCINCEGMGSLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
Match: M5XZ38_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012634mg PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.100e-64
Identity = 119/158 (75.32%), Postives = 133/158 (84.18%), Query Frame = 1

		  
Query: 2   VTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAISV 61
           + P+   LHSPF+C   KLS   SS  +  K   NQRSP SYPCIRA DLDQNT+VAISV
Sbjct: 3   LAPSIPRLHSPFLCCPLKLSTSPSSLCISHKFAGNQRSPRSYPCIRALDLDQNTVVAISV 62

Query: 62  GVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEK 121
           G+VSVA+GIGIPVFYETQI++AAKR+NTQPCFPC+G+GAQKCRFC GTG V V+LGGDEK
Sbjct: 63  GLVSVAVGIGIPVFYETQIDSAAKRDNTQPCFPCSGTGAQKCRFCTGTGTVVVELGGDEK 122

Query: 122 EVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           EVS CINCD +GS TCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 123 EVSNCINCDGVGSFTCTTCQGSGIQPRYLDRREFKDDD 160

[Close]

BLAST of Spo23917.1 vs. ExPASy Swiss-Prot
Match: SPA_SOLLC (Protein SPA, chloroplastic OS=Solanum lycopersicum GN=SPA PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.200e-60
Identity = 112/159 (70.44%), Postives = 127/159 (79.87%), Query Frame = 1

		  
Query: 1   MVTPATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSPTSYPCIRAADLDQNTIVAIS 60
           +  P+ S   SPF+ S  KL    SSS    K  +  R   SYPCI+A DLDQNT++AI+
Sbjct: 2   LTAPSLSRFKSPFISSPLKLPTL-SSSFFTQKFHQTCRRRNSYPCIKAVDLDQNTVIAIT 61

Query: 61  VGVVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDE 120
           VGV+SVAIG+GIPVFYETQI+NAAKRENTQPCFPC G+GAQKCRFC GTG+VTV+LGG E
Sbjct: 62  VGVLSVAIGVGIPVFYETQIDNAAKRENTQPCFPCTGTGAQKCRFCMGTGSVTVELGGGE 121

Query: 121 KEVSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
            EVS+CINCD  G LTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 122 TEVSRCINCDGAGGLTCTTCQGSGIQPRYLDRREFKDDD 159

[Close]

BLAST of Spo23917.1 vs. ExPASy Swiss-Prot
Match: LQY1_ARATH (Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana GN=LQY1 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.100e-56
Identity = 112/157 (71.34%), Postives = 126/157 (80.25%), Query Frame = 1

		  
Query: 4   PATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSP-TSYPCIRAADLDQNTIVAISVG 63
           P+   LHSPF+      +  + S+       RN RSP TSYP I+A +LD NT+VAISVG
Sbjct: 6   PSPPRLHSPFIHCPINFTPSSFSA-------RNLRSPSTSYPRIKA-ELDPNTVVAISVG 65

Query: 64  VVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEKE 123
           V SVA+GIGIPVFYETQI+NAAKRENTQPCFPCNG+GAQKCR C G+GNVTV+LGG EKE
Sbjct: 66  VASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKE 125

Query: 124 VSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           VS CINCD  GSLTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 126 VSNCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

[Close]

BLAST of Spo23917.1 vs. TAIR (Arabidopsis)
Match: AT1G75690.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 6.400e-58
Identity = 112/157 (71.34%), Postives = 126/157 (80.25%), Query Frame = 1

		  
Query: 4   PATSGLHSPFVCSSRKLSAFNSSSILPSKLPRNQRSP-TSYPCIRAADLDQNTIVAISVG 63
           P+   LHSPF+      +  + S+       RN RSP TSYP I+A +LD NT+VAISVG
Sbjct: 6   PSPPRLHSPFIHCPINFTPSSFSA-------RNLRSPSTSYPRIKA-ELDPNTVVAISVG 65

Query: 64  VVSVAIGIGIPVFYETQINNAAKRENTQPCFPCNGSGAQKCRFCAGTGNVTVDLGGDEKE 123
           V SVA+GIGIPVFYETQI+NAAKRENTQPCFPCNG+GAQKCR C G+GNVTV+LGG EKE
Sbjct: 66  VASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKE 125

Query: 124 VSKCINCDALGSLTCTTCQGSGIQPRYLDRREFKDDD 160
           VS CINCD  GSLTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 126 VSNCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

The following BLAST results are available for this feature:

BLAST of Spo23917.1 vs. NCBI nr
BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
BLAST of Spo23917.1 vs. ExPASy Swiss-Prot
BLAST of Spo23917.1 vs. TAIR (Arabidopsis)

BLAST of Spo23917.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902178145\|gb\|KNA09077.1\|	4.0e-86	100.	hypothetical protein SOVF_1568...	[more]
gi\|802607462\|ref\|XP_012073817.1\|	2.2e-68	81.0	PREDICTED: protein SPA, chloro...	[more]
gi\|731334397\|ref\|XP_010678205.1\|	1.1e-67	83.6	PREDICTED: protein disulfide-i...	[more]
gi\|661888966\|emb\|CDP07409.1\|	1.5e-64	75.3	unnamed protein product [Coffe...	[more]
gi\|743851436\|ref\|XP_011028995.1\|	2.5e-64	77.2	PREDICTED: protein disulfide-i...	[more]

BLAST of Spo23917.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QPA2_SPIOL	2.8e-86	100.	Uncharacterized protein OS=Spi...	[more]
A0A067KLC7_JATCU	1.5e-68	81.0	Uncharacterized protein OS=Jat...	[more]
A0A0J8CB64_BETVU	7.7e-68	83.6	Uncharacterized protein OS=Bet...	[more]
A0A068UGS0_COFCA	1.0e-64	75.3	Uncharacterized protein OS=Cof...	[more]
M5XZ38_PRUPE	5.1e-64	75.3	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo23917.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
SPA_SOLLC	2.2e-60	70.4	Protein SPA, chloroplastic OS=...	[more]
LQY1_ARATH	1.1e-56	71.3	Protein disulfide-isomerase LQ...	[more]

BLAST of Spo23917.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT1G75690.1	6.4e-58	71.3	DnaJ/Hsp40 cysteine-rich domai...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001305	Heat shock protein DnaJ, cysteine-rich domain	GENE3D	2.10.230.10		coord: 84..145 score: 2.
IPR001305	Heat shock protein DnaJ, cysteine-rich domain	unknown	SSF57938	DnaJ/Hsp40 cysteine-rich domain	coord: 87..146 score: 6.1
None	No IPR available	PANTHER	PTHR15852	FAMILY NOT NAMED	coord: 1..159 score: 1.2
None	No IPR available	PANTHER	PTHR15852:SF27	PROTEIN DISULFIDE-ISOMERASE LQY1	coord: 1..159 score: 1.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010206	photosystem II repair
biological_process	GO:0009657	plastid organization
biological_process	GO:0006457	protein folding
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003756	protein disulfide isomerase activity