Spo23927.1 (mRNA) | SpinachBase

Overview


Name	Spo23927.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	NifU-like protein 4
Location	Super_scaffold_96 : 199357 .. 209305 (-)
Sequence length	1571

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTAGCGATTTGTAAGCACAAGCGCAAAAATAAAAACAAATAAAGTCCAACAAAAACAGTAGAGAGGCTTTTCATCATCATCATCATCCGTCGTCTTTTACCGCCAAACAACAGTAGAGAGGCTTTCAACTCCTTCCAGACACCTTTGAATCTTTGCCACCAATTCAATTCTCAAAACCCGTCGATTGTTTGAGCGGGGGAAAGACAAAATGAGGGTTTTCAGGCAGCTGAGATTAGCTCATCACGCTTTCGTCGCCGTTAATTCAAACCCTTTCCTCAACCGCTGCATGAACTTTCGATCGGTGGTCTCATCTTCATCATCACTGTTATCTAGTTTCCATGCTTCCGATTCTTCATACGCTTCCAATTTCGTAAATTTGAAGAATTCACCTCGCCACCATTTGAATTTGAAGCCATGGGGGCCGTTTCTAGGTCAGATTTTTATTTTTTTGGAAATACTTGGTAATTGATGTTGAAAATTTGGGCAAATTGCTTGTTGTTTTCTGGTATTGTTTAAATATTTGGTTGTAACAATGATTCTTGCGGTTTAATGAGTGTATGTTATGAAAGTGTATTTGAAATGATGAGATCAAGAATATACTCCGTATGTAACTATGTTTTTTTAACACAAACACCGATTTTGAACAGGGCAAAGGAGGACGATGTTTATTCAAACACAGCCGACTCCGAATCCGGCATCATTGATGTTCTATCCGGGGAAGTCAGTTATGGAAATTGGGAGTTCGGACTTTCCGAATGCTCGCACTGCCATGAACTCACCTTTAGCAAAATCACTTTTTGGGATTGATGGTATGCTTGTTTAATTACTCCTTGTTTTATTTTATTTTGGTGCGGATGAGCCATAAGTGACCTACAAATTAAAAATTGGGAGGAGGATTTGAATATGAGACCTATTGTGCACATACCCTCTATCTTAACCACTGGGCAAAGACCTCGTTGGTAGTACTCATGTTTTTTAGTATGAAGTATTGTGATGTATGTTATGTTTTCTATTTTAGGATAGCAACCACCTTAGAGTATATACTATGTATTTGACATTTATGTTTGTCACCATCTTTTAGAAATATTTCAAAATATGTTACTCTCATTGTTTCTAAATACTTCATCCGTTTCTTATTAGTTGATAGGTTTTTAGCACTTTTCACACAAGTTACTTTGACTTCCTTTTGTGATTTACACTTAGAAAAAACTAATGTTGGATTTTGTTAGATTCGTATCAATGAATATTTTCCAAATACTATAACTCTTTGTAATTTTTACTTGTTCATATCAACTTTTTATAATTTTACTTTCTCATAATTGAAGATATTAATGTTTGAAATCATGCATTAGCAAGGCCATACGTGGTTTGATCATATATTTATTCGAAATGTGAATGGAGTTATTGTGGTAACACAAGGAACATTCAATTTTTTACTTTAAAAACCATATGTAGAAAGGTTTGTGTTTTGGGATGACCTAAAATAGGATTGTGGCCTATTATTGAGGGACAATGGGAGCCCCTGTGATGAGGTTTCTTAGCAATAACATCATTTTGGTTGTTATGTTTGACGTTATTGACTACAAAATTCAAAGGTTTTTGGTATAGAAATTGTGCATCTCTTGAGTTTTGACTTTCTATTTTTGATGTTCCACTCCTCGGTAACCAATCTACTCATTTCATATTTACTTGATTTTTACGGTTTCTAGTAGCACATGTGACTGTTTTTTCCCTTACATTGATGGTTGCCCCTAAAGAATTCCCAATTTTGTGTGGTTTACAAAAAAAAGGATGCCAATTTGCATGCTTATGTTTTTGGGGTCTTTTGTTCTTGGTAACCTACAGATACACAAAGCTTGTACTTCTATCTTGGGAGGGTATCTCATTTGGTATATTACTTTGGATCCTTTTTCCCTCCTGCTCCTTAGTAACCATCTAATGTTTAGTAGAATTTAATACTTGATGGCAGCATTAGGGTCTTTATTCGGTCAAGCTGGTAATTGTAGTCTTGTTGACTTACCTCTTCAGAATGCTCAGTGTCATGGTCTCGGGAATGGAATGTACTGTTTTGTGGAGGATTTCTTGAATTTGGTGTATTTTGTAGAAGATAAAGAGTTGTTTCTTATCATTTCCCTCTAAGTTTGGAGTCTTCTAGGTTAGTGTGGTCTACCCCCTTTCTTTAGAGAGCTTGTAGTAAACTCTCTCGGATGTTATTTAAGTTCTGGAGTACTGAGTACTGACAAGAATGTGAAGAGGAGTAGAGTTTTTAGATTTATGAGGAAGTCAAAATCTGTCAAAGGATAGGTTTAATTTGCAGAACAATGTTTATGGGGATGTTGGAGGCCTAAAAAGGGAGACTATTCAGAGGCTCACAAAGACTAGTGGTTAGGGAGTGAGGGATTTCTGGCAATTGAATTGGTTACTTGGTTAAATCATGTAAAAAATTTGAGGGGGGTAAGATATATTTTACTTCATTGTGTAAACTTTTTTTTGGATGATGAAGGGATTTAATAGAAACAAAATGGTATATTTAGGATGGAGGACTGGAGGGCATAGCGTTTGGATGATTAGTGAAAGCGTGTTTCTTTTGTTTTTATTTTTGTTACTTTTTTCCTAGCATACTTAACGTCTTAACCATAAAAGGTGACCCGTCATCTTGAAGCCTATGCCTTACTTGAAATTGATAGTTTGGTTGGATGTTAATTATCGAGCATGATTTATTCTATATGTTAGACAGTCTTTGTTGGATATTGTGGCTACTGCTAGACAGACTTTGGTGTTTATTATGGATTATTGTGTGTAATGCTCTTTGATACAGAAGCTGGATTTGGCATAGTGCAAGGAAGAGTGCCCAAGATGACAGTTGACTATTATGCAAAAACATAGAAATACTACTCTGATGCGTTATTGACTTGGCATGTCAATACTTTGTGACCAGGCTACCTATTTCCTACTAAGATGAGGAGACTTGCATCTAGTTTAGTTTATTCCTTGGTTTGTTGGAAGATTGCTAGGGATTTCCTAATGAAGAGAATCCCTAGTTAGATGCACCCTCATTCGTCATCTCGGACACTTTCAAAGAAGGAAACAGTTTGACCAGAAGCACCAATTAAGGCTTTGTTGTAGTATTTCTTCCCCCCCTTTCACCCTTCGATTCAGCCTAACAATTTCACTTTGTCCATTGAAAACATCGAATCTCATAGTAGCCTCCGATGAGATATGATTTCCACAAAATATGCCAAGCTGGTGCTAGAGAATTAAAACGTGTGGGACATTTTAATAATCATTTTGGGATTAAGGCTTATGATAGTGGGAAGAGAGAGGTTGTGGGGCCATGACTTATGATAGTGGGAAGAGAGAGGTAAAAGTATTTGTAGCTCCATGCCATAAGTGTGACAATTAAACTGAGACGGAGGGAGCATCACTTAATCCAAGGGCCATAAAGCCCATGATACTATTAATTTATATTATAATAATTTTAGTTCTCATCTTACCTTCTTTTAGGGGAATATTAAAGCTTACATAATTGGTGAAAGAATACTGCATTATAAGTACTAAAAATATACTTAAAAGTATATTTTTTTCTTACAACAAAAAGTTAACTTTGCTAAAAATTCCGGTTGGCACTTGGTACAATGGGCCAAACAAAGTAAACGGTTTCTATTTCTTGAGAGTGCTTATTTTGTGGCCACACAAAATATTTTGTCACAAATGTTTCTCCAGAACAGTTTTGGAAAACAACTCCTGGGAAATGAAAATTATTTTCTAAGAAGCTTGGCCAAAACAAACCCTTAACGGCGCTTCTTTCTAGGATAGGTGATTGTTGTGACCTTGTAATCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTCATTCTCTCTCATTTTCTACTGTTTCCAAATTCGTGACAAGACTACTTGCCTCAATGGTTTTATCTATTCTCCCCCCACTAGTGGTAATTTCCTTATCTCAAAGAAAGACGGGGAAAAAGAATTCTCTTGATTTAGCTTGAAAACATTATCATTTTACATTTCTACGCCTTTTATGCTTAGGAGGTTGAGAAGCCGCCTTTCGTGTTATTTTTCCTTTTCCGTAAACAATTGGTATCCCTTTGATGCTTGTTTTTAGCATGTTCTTATCACTTATCCCCAAAAGAGAGAAAAAGATATGCTCATGTATTTTTTGAAAGGGGACATTTAGTTTACACAAAAGGAAAGGGAAAGAAATCAAGACAAGGAAGTTTTATGCTTGTTTGAGTTTAGTAAGGGATTCCTTCTTAAATATTTGGTTTAAGAAAACAAAATTGACTTTTTTCAATCAATTTTGAACTTCTTTCCTTATCATTGTCATCATCATAAACTTACTCTTTAGGCCACCATTATCTACCCCACAAATCTTCTCTTCGACCATCATCAACCCCAGTCCCAACCAGTGTATAAAAAAGCGCAAAGCGCACTAAAGCGATATGAGTCCTAAAGCTTAAGCGCAAGCGCAAGGTGCACGCTTCATAGAAGTGAAGCGCACTTTTAAAGAACTAAAGGTTTTTTTACTATTATGCATATATATCTTACTAAAATAATCATAAAAATATGTAAACACTATATTTGCTTCCAAAATATTACTCTTTGCTTTAACAAAAATAAAGCATATAACATTGTGTTTATCCAAAAGCTAGGGTCGGCTGTTGTGACTGTTGTCTTCTTCTTTTCTTCTTTTTCCTTTTCTTTTGGACTCATGGTCTACTTTTTATTGTTAAGGATTAATAGGGAGTGGTCCAAAACACAATAACAACATATAAACAAGCTTTCAACGTAAAGTAATAAAAAAATAAAAGAATTTCAATGAAGCGCCAAAAGCGCGCTTTTTGCGCTTTGCGGGCTTCATGTGCTTAAGCGCTTCGGCGGGCTTAATCACAAGAGCTTCGCTCGGACCTAATTAAGCGTTTTTCCCTAGAGCTTTGAGCTTCAGGGCTTAAGCGCGCTTTTTTAAACACTGGTCCCAACCTTCAGCTTCATACCACCATACTCTACGTGACAACCTAAAACATCTTTTTGGATAAATACGAGTTTGAGATGAGAATAAAGAAGATCAAAGAGTGGAATGGTGCATGAATTATTGCCTCATGTTAATCATCTTTGACTTGAATTCCAAATAAGTTTGATGCATAGATTAAAAAGGATGACGATTAGTAAATATAAAAGCTCTCTACTCCCGCTAGAGATTTGTAGGTTGTTTGACCAAATCTGATGAGTACTTCGGTCGAACCTACCCAGAGGTTGTTTTGGTATAACTTGCTGGTGGCATTGATTCATTTTCTGAGGCTATAAGTAGTTTTAGGGTAGCTTCTTTGTATGTACATTTAATTTCCTACATTTTCAAATAGTTTTTAGAGAGAGAAAGAAGAGAAACACCCTAATGCTCAAAATTAGTGTGCACATTATCACCAACGTCATGTCTTCGAAGCACCTCTCTCCGCATGAACTTGTGAAGGACTTCTCTTCACCACGATGCACATAATCATCATCATCATCTACATTTTTTTTTCAACCACCTTTTCCATGGTGGTTTGCCCATTCAGTTTTTCGCTCACAAATGGAATATGGCCTGCGATGGTTTACTTCTCATTCTTTCTCTCACCTTGTTTTTAGGGATCTAACCCGACGCTGATACCATGTTGAAATTATAATAGAGATTAGAGGGGAAAGAATATAGCAAAGTTATACTACTATTTCATTCAATCCAATTAATTAAGTTACATTAAAAGACCTTTATAGGCTCATAAAACATACTACAGTGCTAGAATGTGGAATAACCCACCTACACATTATTGCCCACTAATAATATTCATAAATAATAGTGTTCCTAAAATTAAGGGACACTAGCACACTAATTTTGAGCTTAACTTTTAACAGTTTGTACCTTTAGTGCTTTTGAAAAACAAATCAACTTGTCAAACTTGCAATTTGACATCCCCATCCCCATGTCCATGTTCAATCTTTAGCTTTCATCGCACCACCATACCTCTCTTTGACAACATATGCTACAGGTGCTCCGTTAAACATATTGCATCCTCATTCTCTTTCTCACCATCTCTGTCCTCTCTCTCACACATTCACCACAATCACCGTGAAACCACCGTAATCTCATTGTTTCTCAGCTGCACAATGTATAGGTTGGGCAAGATTTTAGTCTTTGGTGGTCGGCCGTAACAGATCTGAAACCTTAACGACCGATTTAAAAACCAACTTTTATCATTCTTGATTGGGTTGGTGAGTAATGATTCCTTAATTGTTCGGTTGGTTCATAAGTGCTCTCTCATTGTCCTTGTGGTGGTGATTTTCTGGCAGTTCCTATTTTAGTGATTACCATGATGGTAATTCAGGTTTAATGGTGTGCAGTGTATTGATTTCGTGGTTTAGATGGTGGCTATGTTGGTGGTAATTCGGGTTTAGAACTTTTGGGCAGGCTAGTGATGGTGGTGCTTAGGTTGTGGCACCTTTTGGTGGAAGGTGGTTGTTGACACTATAATGATGGTTTCGGTCAGGCTTAGGTCATACCGCGGCAACTAGACACTAGCTAAGGAAAACATCAAAAAGGCTGCTGATTCTCTTTTATTTTCTTAAAACGTGGGTACCAAATACCTCATAATTACAATTTCGTCGTTTTGTGTGCTTGGCTTTTGCTCTATTTTTCTTAACAAGTCTTTTCTACCGAGTTAGTCAGTGGCTTAATCTGCTACTCTAAAAATCATGGTAGACGTATATGGGTGAAATTTTAAATACTCAATGCTATTTTGACATTCGATGATGTTTGTTGTGACCATATAAGTTACTCATTTTACAGGAGTTACACGAGTCTTCTTTGGGTCCGACTTTGTAACAGTCACAAAGTCTGATGACATTTCATGGGATCTTCTGAAACCGGAGATTTTTGCTGCAGTTATGGATTTCTATACATCTGGTCAGCCTTTGTTTCTGGATGAAAGCACCGCAGCTTCCAAGGACACAGCTATTCATGAAGTAAGTGCTTGGACCTTCCATTTTCTCATGTTCTGTTACTGTTAAGGGTTCTTTCGGTTCACCTGATTTTGACTGAAATAAATTTGTAACTTATTTTGTTTGAACTTATTTTTCCTGAAACACTATTTTGTAAGTTAAAGATCTGGAATTTGTAATTCAGAAAACTTGCATCCCATTCAATACAGTTCTTTTGAACTTTGAAAACCAGCAGAAACTTTGCTTAAGCTCAGAGCAGAGACTGTAAGGCCCATTAAACAACTGTGAGCTGTCTTACTCTCAGGCAATTTGTTCATGGTAAATAAGCTATATTGCAGGATGATTCAGAAACTGTTGCTATGATAAAAGAGCTTTTGGAGACTCGCATACGGCCAGCAGTGCAGGATGATGGTGGTGATATTGTGTATAGAGGATTTGATACGTATGTTTCTGTGTCTCTGCACAAAATTTAGGAATGTTCTTTGGTCTAATCTTAGTGTTTATCGCATTTGACACTTTTTGGTTTTTTCCCCAGGGAGACTGGAATAGTCAAATTGCAGATGCAGGGAGCATGCAGTGGCTGTCCTAGTTCATCTGTGACTTTAAAATCTGGCATTGAGAACATGCTAATGCACTATGTGCCTGAGGTGAGCCTCCTTTCTTACGTCATTTAGATTGATACCACGTATGAGAATGTAAAAGATAAATGATAAATTAGTTCACAATTACCACCTATTTGTATATACTGTACTTTTTTATGTTTACATTAATTCTTCTGTGGACTAGAAGTTGCAGTTTGTGGAGCCAATCTGCTTGTGCTTGGTTAATATTCTATGTGTGACTGACGAATCTTCACTTGTATCTTTCTATAAAGGGTTATAACATAGACTAGCAATTATTTCTTACCTTGTGAGTGTAGATAATAAGCAGAGGTCCACATTTCAACGTTCCGTGGATATCTTGTTTCTCATCCTGAGCATTTGCTTAAACCAGCCAAGCCTACATTTAGAAGTATTTTCTGCTAGTTGGTCCTCTCCCTTGCATTGAACATGTTTAACTTCGACCTTTTATTTCAGCTTCTCTTATTTATGGATGCTTCACCTTATATGCTTGGTTTTGCGATGGAAACAAGTTTCTTTGCTATGGATGCCGTCAATTGTCTTATAGATCAGACAAGAGATATGTATAACTCCCTTAGATCAGACAAGATAATTAGATAAACATGATTTTTGTGGATTGTGCTGTCTCGCTTGTTTGACAGACATGAAGATACATGAATTTGCAGCTATTTTTTTCAAGCTGTCTAGGAAACTGTCTCAATCATTGTGTGAAATATAGCTCTTAGATTGTTTGACATATATAACTCAAGAATACCTCCTGACGACCTCTTAAGTGAATTGACTAGGATTTTGCACAAACTTCAAAACCAAAACACAGATTGCTATATCAGATGGACATATCTGATACCTGTTTTAGTTGCTGCAAGATTGAGCAAGTTATCCATTATGTTTTTGAGAACTTCCTAATGGGCCTTGTTAAATCCTTCAACCATGCATTGGTCCTTATTAGTTTGAACTTTGAAGTAGTGTTTTTTTAGGATGCTAATTCTCCATCGATCTTCTTCAGTCTCCTGCATACTTATTAGTTAACGAAAATACCTTTAGATCTGTCATCTCATAGCACTGCATCATCTCTCTCAAAAGCAGAAGTACAACTGGGATTGTTACCATCTGTGTTTTTTTTGTTTTTTTGATAGATCAGTGAGACTGATTACAATATCAAGTATCTCTCATCATTGTGCTTCCCTGTTTCTAATTTAAAGTGTGCGCGTACTCAAGCCCTGTTTGGTTCAACTTGTTTTCACTTATTTCAGGCAAAATAAGTTTGTTTCAGACATTTTACACACAAAATAAAACAATTATAGACAAAAAGTTCAGAATCAATATGTTGAGTCAAACAGAGCCTAAGATATCTTTCAAAGCCTTTGTACTCAAAAAGTCATTTATCCAACTTTACTAAGGTATTGAAGCCTGCTTAAAGCCATATAGATCCTCTTTGAGCTTCAACACTTGTTTCTTCTTGCCCCTTCATCTCAAATATAGGAGTAGCTTCCTCTATATATCAACCCTTTGAGGCTTGGATGCAAAGGCTTTAATGGAGAATTCAGTCAACCCATAGATTTTTTTAAAAAAAAGAAAAGAAAAAAGAACCTCTTCTAGTTTTTGCATATGAAGTCGTGTCATGTGTGTACTCCAATGACATACGAAGTATGTTATAAACAAAATTTGTGTTCAGACTCAGAATTGTCCTTATTATTTTACTTTTTTGCTGAAAGTTCTTGATTTCTACTTTAAGGTCAAAGGGGTGGAACAAGAGTTGGACGAGGAGGAAGAAGAGGCTGCTGCACTGAAATAGAGCTGCTTCTTGATATTTCATCCAAACAAACGCTTAAAAATGACGAGGATAGAGGGTTAATGGGTTTATACTGACGATTATTCACATGTTAACGAGGGACATCTTTGTATTATGATTGAGTTCAAAAGTTGCACGTGTAGTATACATCTGTAGATGTCAATAATCTGAGAATATGTATCAATTTTGTTTGAAAATTTACAGTCTCTTATTCAACCTTGAATGTAGATGAGCTACAGATAGGTAATTTATATGCTACATTGAAGCAGCGTTAACATTTCGTAGGATATACAGCGGTTAGTCAATAGTTGCCTGCATTTCTTGCATTCATTCTCGTAGTGCTGCGAAAATAATACGAACTACTTTGTTAGACTTCATTTATTTTCGTTTTGCAGACGCAAACCAAAAACTCTTATTGGTTATTACCTTTTTTTTTTTTTAATCTCTGCTTCTGCGAATAATGATTAGACAATGAGCTTCAATCGTTTTATGATTTAGGCTTATACTCCCTCCGTCCCGGAATATTC

mRNA sequence

ACTTAGCGATTTGTAAGCACAAGCGCAAAAATAAAAACAAATAAAGTCCAACAAAAACAGTAGAGAGGCTTTTCATCATCATCATCATCCGTCGTCTTTTACCGCCAAACAACAGTAGAGAGGCTTTCAACTCCTTCCAGACACCTTTGAATCTTTGCCACCAATTCAATTCTCAAAACCCGTCGATTGTTTGAGCGGGGGAAAGACAAAATGAGGGTTTTCAGGCAGCTGAGATTAGCTCATCACGCTTTCGTCGCCGTTAATTCAAACCCTTTCCTCAACCGCTGCATGAACTTTCGATCGGTGGTCTCATCTTCATCATCACTGTTATCTAGTTTCCATGCTTCCGATTCTTCATACGCTTCCAATTTCGTAAATTTGAAGAATTCACCTCGCCACCATTTGAATTTGAAGCCATGGGGGCCGTTTCTAGGGCAAAGGAGGACGATGTTTATTCAAACACAGCCGACTCCGAATCCGGCATCATTGATGTTCTATCCGGGGAAGTCAGTTATGGAAATTGGGAGTTCGGACTTTCCGAATGCTCGCACTGCCATGAACTCACCTTTAGCAAAATCACTTTTTGGGATTGATGGAGTTACACGAGTCTTCTTTGGGTCCGACTTTGTAACAGTCACAAAGTCTGATGACATTTCATGGGATCTTCTGAAACCGGAGATTTTTGCTGCAGTTATGGATTTCTATACATCTGGTCAGCCTTTGTTTCTGGATGAAAGCACCGCAGCTTCCAAGGACACAGCTATTCATGAAGATGATTCAGAAACTGTTGCTATGATAAAAGAGCTTTTGGAGACTCGCATACGGCCAGCAGTGCAGGATGATGGTGGTGATATTGTGTATAGAGGATTTGATACGGAGACTGGAATAGTCAAATTGCAGATGCAGGGAGCATGCAGTGGCTGTCCTAGTTCATCTGTGACTTTAAAATCTGGCATTGAGAACATGCTAATGCACTATGTGCCTGAGGTCAAAGGGGTGGAACAAGAGTTGGACGAGGAGGAAGAAGAGGCTGCTGCACTGAAATAGAGCTGCTTCTTGATATTTCATCCAAACAAACGCTTAAAAATGACGAGGATAGAGGGTTAATGGGTTTATACTGACGATTATTCACATGTTAACGAGGGACATCTTTGTATTATGATTGAGTTCAAAAGTTGCACGTGTAGTATACATCTGTAGATGTCAATAATCTGAGAATATGTATCAATTTTGTTTGAAAATTTACAGTCTCTTATTCAACCTTGAATGTAGATGAGCTACAGATAGGTAATTTATATGCTACATTGAAGCAGCGTTAACATTTCGTAGGATATACAGCGGTTAGTCAATAGTTGCCTGCATTTCTTGCATTCATTCTCGTAGTGCTGCGAAAATAATACGAACTACTTTGTTAGACTTCATTTATTTTCGTTTTGCAGACGCAAACCAAAAACTCTTATTGGTTATTACCTTTTTTTTTTTTTAATCTCTGCTTCTGCGAATAATGATTAGACAATGAGCTTCAATCGTTTTATGATTTAGGCTTATACTCCCTCCGTCCCGGAATATTC

Coding sequence (CDS)

ATGAGGGTTTTCAGGCAGCTGAGATTAGCTCATCACGCTTTCGTCGCCGTTAATTCAAACCCTTTCCTCAACCGCTGCATGAACTTTCGATCGGTGGTCTCATCTTCATCATCACTGTTATCTAGTTTCCATGCTTCCGATTCTTCATACGCTTCCAATTTCGTAAATTTGAAGAATTCACCTCGCCACCATTTGAATTTGAAGCCATGGGGGCCGTTTCTAGGGCAAAGGAGGACGATGTTTATTCAAACACAGCCGACTCCGAATCCGGCATCATTGATGTTCTATCCGGGGAAGTCAGTTATGGAAATTGGGAGTTCGGACTTTCCGAATGCTCGCACTGCCATGAACTCACCTTTAGCAAAATCACTTTTTGGGATTGATGGAGTTACACGAGTCTTCTTTGGGTCCGACTTTGTAACAGTCACAAAGTCTGATGACATTTCATGGGATCTTCTGAAACCGGAGATTTTTGCTGCAGTTATGGATTTCTATACATCTGGTCAGCCTTTGTTTCTGGATGAAAGCACCGCAGCTTCCAAGGACACAGCTATTCATGAAGATGATTCAGAAACTGTTGCTATGATAAAAGAGCTTTTGGAGACTCGCATACGGCCAGCAGTGCAGGATGATGGTGGTGATATTGTGTATAGAGGATTTGATACGGAGACTGGAATAGTCAAATTGCAGATGCAGGGAGCATGCAGTGGCTGTCCTAGTTCATCTGTGACTTTAAAATCTGGCATTGAGAACATGCTAATGCACTATGTGCCTGAGGTCAAAGGGGTGGAACAAGAGTTGGACGAGGAGGAAGAAGAGGCTGCTGCACTGAAATAG

Protein sequence

MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNSPRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo23927	Spo23927	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo23927.1	Spo23927.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23927.1.utr5p.1	Spo23927.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23927.1.CDS.6	Spo23927.1.CDS.6	CDS
Spo23927.1.CDS.5	Spo23927.1.CDS.5	CDS
Spo23927.1.CDS.4	Spo23927.1.CDS.4	CDS
Spo23927.1.CDS.3	Spo23927.1.CDS.3	CDS
Spo23927.1.CDS.2	Spo23927.1.CDS.2	CDS
Spo23927.1.CDS.1	Spo23927.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23927.1.utr3p.1	Spo23927.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo23927.1.exon.6	Spo23927.1.exon.6	exon
Spo23927.1.exon.5	Spo23927.1.exon.5	exon
Spo23927.1.exon.4	Spo23927.1.exon.4	exon
Spo23927.1.exon.3	Spo23927.1.exon.3	exon
Spo23927.1.exon.2	Spo23927.1.exon.2	exon
Spo23927.1.exon.1	Spo23927.1.exon.1	exon

Homology

[Close]

BLAST of Spo23927.1 vs. NCBI nr
Match: gi|902166896|gb|KNA07288.1| (hypothetical protein SOVF_173320 [Spinacia oleracea])

HSP 1 Score: 549.3 bits (1414), Expect = 3.900e-153
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1

		  
Query: 1   MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS 60
           MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS
Sbjct: 1   MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS 60

Query: 61  PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL 120
           PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL
Sbjct: 61  PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL 120

Query: 121 AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS 180
           AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS
Sbjct: 121 AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS 180

Query: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS 240
           KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS
Sbjct: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK 279
           SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK 278

[Close]

BLAST of Spo23927.1 vs. NCBI nr
Match: gi|731334392|ref|XP_010678203.1| (PREDICTED: nifU-like protein 4, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 453.8 bits (1166), Expect = 2.200e-124
Identity = 233/278 (83.81%), Postives = 248/278 (89.21%), Query Frame = 1

		  
Query: 1   MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS 60
           MR FR+LRLAH AF+AVNSNP  NR +NFRS+ +SSS     FHA D SY+ NF     S
Sbjct: 1   MRGFRKLRLAHQAFMAVNSNPLSNRYINFRSLFTSSSPFPFKFHAFDYSYSPNFA----S 60

Query: 61  PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL 120
             H+++LKP  PF GQRR MFIQTQPTPNPASLMFYPGK VMEIGSSDFPNARTAMNSPL
Sbjct: 61  SLHYMSLKPRAPFQGQRRMMFIQTQPTPNPASLMFYPGKPVMEIGSSDFPNARTAMNSPL 120

Query: 121 AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS 180
           A+S+FGIDGVTRVFFGSDFVTVTKSDD SWD+LKPEIFAAVMDFYTSGQPLFLDESTAAS
Sbjct: 121 ARSIFGIDGVTRVFFGSDFVTVTKSDDASWDILKPEIFAAVMDFYTSGQPLFLDESTAAS 180

Query: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS 240
           KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVY+GFD ETGIVKLQMQGACSGCPS
Sbjct: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYKGFDLETGIVKLQMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK 279
           SSVTLKSGIENMLMHYVPEVKGVEQELD E+EEA AL+
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDAEDEEATALE 274

[Close]

BLAST of Spo23927.1 vs. NCBI nr
Match: gi|1009119405|ref|XP_015876364.1| (PREDICTED: nifU-like protein 4, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 370.5 bits (950), Expect = 2.500e-99
Identity = 187/244 (76.64%), Postives = 212/244 (86.89%), Query Frame = 1

		  
Query: 32  VVSSSSSLLSSFHASDSSYASNFVNLKNSPRHHLNLKPWGPFLGQRRTMFIQTQPTPNPA 91
           + S+SSS  ++ + SD      FV+L+NS    L    WGP  GQ+R+MFIQTQ TPNP 
Sbjct: 42  ISSASSSAATTSYFSDQLIPYGFVSLRNSAVSPLPYGKWGPG-GQKRSMFIQTQSTPNPL 101

Query: 92  SLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDISWD 151
           SLMFYPGK VME+GS+DFPN+R+AMNSPLAK++FGIDGVTRVFFGSDFVTVTK++D+SWD
Sbjct: 102 SLMFYPGKPVMEVGSADFPNSRSAMNSPLAKAIFGIDGVTRVFFGSDFVTVTKTEDVSWD 161

Query: 152 LLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDD 211
           LLKPEIFAA+MD+Y+SGQPLFLD  TAA+KDTAIHEDDSE VAMIKELLETRIRPAVQDD
Sbjct: 162 LLKPEIFAAIMDYYSSGQPLFLDSETAAAKDTAIHEDDSEIVAMIKELLETRIRPAVQDD 221

Query: 212 GGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEE 271
           GGDI YRGFD ETG VKL+MQGACSGCPSS+VTLKSGIENMLMHYVPEVK VE+ELD EE
Sbjct: 222 GGDIEYRGFDPETGTVKLRMQGACSGCPSSAVTLKSGIENMLMHYVPEVKSVEEELDAEE 281

Query: 272 EEAA 276
           EEAA
Sbjct: 282 EEAA 284

[Close]

BLAST of Spo23927.1 vs. NCBI nr
Match: gi|225464130|ref|XP_002264979.1| (PREDICTED: nifU-like protein 4, mitochondrial [Vitis vinifera])

HSP 1 Score: 368.2 bits (944), Expect = 1.200e-98
Identity = 183/239 (76.57%), Postives = 209/239 (87.45%), Query Frame = 1

		  
Query: 37  SSLLSSFHASDSSYASNFVNLKNSPRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFY 96
           SS  ++ +  + + +S F + K+S     +L  W  F GQRRTMFIQTQ TPNPASLMFY
Sbjct: 32  SSFTTTSYLENPTSSSRFTSFKSS-----SLPKWSHFGGQRRTMFIQTQSTPNPASLMFY 91

Query: 97  PGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPE 156
           PGK VME+GS+DFPN+R+AM+SPLAKSL+GIDG+TRVFFGSDF+TVTKSDD SWD +KPE
Sbjct: 92  PGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDFITVTKSDDASWDFIKPE 151

Query: 157 IFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIV 216
           IFAA+MDFY+SG+PLFLD +TAA+ DTAIHEDDSETVAMIKELLETRIRPAVQDDGGDI 
Sbjct: 152 IFAAIMDFYSSGKPLFLDSNTAAAMDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIE 211

Query: 217 YRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAA 276
           YRGFD ETGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELD E+E+ A
Sbjct: 212 YRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAEDEDVA 265

[Close]

BLAST of Spo23927.1 vs. NCBI nr
Match: gi|698565498|ref|XP_009773276.1| (PREDICTED: nifU-like protein 4, mitochondrial [Nicotiana sylvestris])

HSP 1 Score: 367.5 bits (942), Expect = 2.100e-98
Identity = 185/240 (77.08%), Postives = 206/240 (85.83%), Query Frame = 1

		  
Query: 33  VSSSSSLLSSFHASDSSYASNFVNLKNSPRHHLNLKPWGPFLGQRRTMFIQTQPTPNPAS 92
           +S+S   L +  +      S F +LK S     +  PW  F GQ+RTMFIQTQ TPNP S
Sbjct: 33  ISTSRRFLYALSSKAPINLSVFTSLKPSQFPSSHPSPWSHFGGQKRTMFIQTQSTPNPLS 92

Query: 93  LMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDISWDL 152
           LMFYPGK V+E GS+DFPNAR+AMNSPLAK+LFGIDG+TRVFFGSDFVTVTKS+D SWD 
Sbjct: 93  LMFYPGKPVLEAGSADFPNARSAMNSPLAKALFGIDGITRVFFGSDFVTVTKSEDASWDF 152

Query: 153 LKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDDG 212
           LKPEIFAA+MDFY+SG+PLFLD STAAS DTAIH+DDSETVAMIKELLETRIRPAVQDDG
Sbjct: 153 LKPEIFAAIMDFYSSGKPLFLDSSTAASMDTAIHDDDSETVAMIKELLETRIRPAVQDDG 212

Query: 213 GDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEEE 272
           GDIVYRGFD +TGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQE+DE+EE
Sbjct: 213 GDIVYRGFDLDTGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEMDEDEE 272

[Close]

BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKR9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_173320 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 2.700e-153
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1

		  
Query: 1   MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS 60
           MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS
Sbjct: 1   MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS 60

Query: 61  PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL 120
           PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL
Sbjct: 61  PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL 120

Query: 121 AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS 180
           AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS
Sbjct: 121 AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS 180

Query: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS 240
           KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS
Sbjct: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK 279
           SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK 278

[Close]

BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CG89_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g112430 PE=4 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.600e-124
Identity = 233/278 (83.81%), Postives = 248/278 (89.21%), Query Frame = 1

		  
Query: 1   MRVFRQLRLAHHAFVAVNSNPFLNRCMNFRSVVSSSSSLLSSFHASDSSYASNFVNLKNS 60
           MR FR+LRLAH AF+AVNSNP  NR +NFRS+ +SSS     FHA D SY+ NF     S
Sbjct: 1   MRGFRKLRLAHQAFMAVNSNPLSNRYINFRSLFTSSSPFPFKFHAFDYSYSPNFA----S 60

Query: 61  PRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPL 120
             H+++LKP  PF GQRR MFIQTQPTPNPASLMFYPGK VMEIGSSDFPNARTAMNSPL
Sbjct: 61  SLHYMSLKPRAPFQGQRRMMFIQTQPTPNPASLMFYPGKPVMEIGSSDFPNARTAMNSPL 120

Query: 121 AKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAAS 180
           A+S+FGIDGVTRVFFGSDFVTVTKSDD SWD+LKPEIFAAVMDFYTSGQPLFLDESTAAS
Sbjct: 121 ARSIFGIDGVTRVFFGSDFVTVTKSDDASWDILKPEIFAAVMDFYTSGQPLFLDESTAAS 180

Query: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPS 240
           KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVY+GFD ETGIVKLQMQGACSGCPS
Sbjct: 181 KDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYKGFDLETGIVKLQMQGACSGCPS 240

Query: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAALK 279
           SSVTLKSGIENMLMHYVPEVKGVEQELD E+EEA AL+
Sbjct: 241 SSVTLKSGIENMLMHYVPEVKGVEQELDAEDEEATALE 274

[Close]

BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
Match: F6HVQ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0106g00620 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.600e-99
Identity = 183/239 (76.57%), Postives = 209/239 (87.45%), Query Frame = 1

		  
Query: 37  SSLLSSFHASDSSYASNFVNLKNSPRHHLNLKPWGPFLGQRRTMFIQTQPTPNPASLMFY 96
           SS  ++ +  + + +S F + K+S     +L  W  F GQRRTMFIQTQ TPNPASLMFY
Sbjct: 32  SSFTTTSYLENPTSSSRFTSFKSS-----SLPKWSHFGGQRRTMFIQTQSTPNPASLMFY 91

Query: 97  PGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDISWDLLKPE 156
           PGK VME+GS+DFPN+R+AM+SPLAKSL+GIDG+TRVFFGSDF+TVTKSDD SWD +KPE
Sbjct: 92  PGKPVMEVGSADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDFITVTKSDDASWDFIKPE 151

Query: 157 IFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIV 216
           IFAA+MDFY+SG+PLFLD +TAA+ DTAIHEDDSETVAMIKELLETRIRPAVQDDGGDI 
Sbjct: 152 IFAAIMDFYSSGKPLFLDSNTAAAMDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIE 211

Query: 217 YRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAA 276
           YRGFD ETGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELD E+E+ A
Sbjct: 212 YRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAEDEDVA 265

[Close]

BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
Match: B9SG71_RICCO (HIRA-interacting protein, putative OS=Ricinus communis GN=RCOM_1086350 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.300e-98
Identity = 189/246 (76.83%), Postives = 211/246 (85.77%), Query Frame = 1

		  
Query: 34  SSSSSLLSSFHASDSSYASNFVNLKNS----PRHHLNLKPWGPFLGQRRTMFIQTQPTPN 93
           S++ ++ SS H  +  + S+F +L++S    PR H        F GQRRTMFIQTQ TPN
Sbjct: 30  SANQTMSSSLHRDN--HISDFRSLRSSLLPQPRTH--------FTGQRRTMFIQTQSTPN 89

Query: 94  PASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDDIS 153
           P+SLMFYPGK VME+GS DFPNAR A+NSPLAKSL+GIDG TRVFFGSDF+TVTKSDD+S
Sbjct: 90  PSSLMFYPGKPVMEVGSVDFPNARAALNSPLAKSLYGIDGTTRVFFGSDFITVTKSDDVS 149

Query: 154 WDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQ 213
           WDLLKPEIFAA+MDFY+SGQPLFLD   AASKDTAIH+DDSETVAMIKELLETRIRPAVQ
Sbjct: 150 WDLLKPEIFAAIMDFYSSGQPLFLDSEIAASKDTAIHKDDSETVAMIKELLETRIRPAVQ 209

Query: 214 DDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDE 273
           DDGGDI YRGFD ETGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQELD 
Sbjct: 210 DDGGDIEYRGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQELDA 265

Query: 274 EEEEAA 276
           E+E+AA
Sbjct: 270 EDEDAA 265

[Close]

BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UWA7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G303900 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 3.300e-98
Identity = 191/265 (72.08%), Postives = 220/265 (83.02%), Query Frame = 1

		  
Query: 16  AVNSNPFLNRCMNFRSVVSSSSSLL-----SSFHASDSSYASNFVNLKNSPRHHLNLKPW 75
           +V  +  ++R + F S  S + SLL     SS  AS+S + ++  +LK           W
Sbjct: 20  SVAPSELISRRLMFSS--SRTPSLLAVGNPSSVLASNSEFLASLPSLK-----------W 79

Query: 76  GPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGV 135
             F+GQRR+MFIQTQ TPNP+SLMFYPGK+VME+GS+DFPNAR+AMNSPLAK+L+GIDG+
Sbjct: 80  NHFIGQRRSMFIQTQSTPNPSSLMFYPGKAVMEVGSADFPNARSAMNSPLAKALYGIDGI 139

Query: 136 TRVFFGSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDS 195
           TRVFFGSDF+TVTKSDD SWDLLKPEIFAA+MDFY+SGQPLFLD  TA+S DTAIHEDDS
Sbjct: 140 TRVFFGSDFITVTKSDDASWDLLKPEIFAAIMDFYSSGQPLFLDSKTASSMDTAIHEDDS 199

Query: 196 ETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIE 255
           ETVAMIKELLETRIRPAVQDDGGDI YRGFD + GIVKL+MQGACSGCPSSSVTLKSGIE
Sbjct: 200 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPDIGIVKLKMQGACSGCPSSSVTLKSGIE 259

Query: 256 NMLMHYVPEVKGVEQELDEEEEEAA 276
           NMLMHYVPEVKGVEQE D E+E+AA
Sbjct: 260 NMLMHYVPEVKGVEQEFDAEDEDAA 271

[Close]

BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
Match: NIFU4_ARATH (NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.100e-94
Identity = 185/249 (74.30%), Postives = 204/249 (81.93%), Query Frame = 1

		  
Query: 31  SVVSSSSSLLSSFHASDSSYASNFVN--LKNSPRHHLN----LKPWGPFLGQRRTMFIQT 90
           +V SSSSS L     S    A+N +N   K+S    LN     + W    GQRRTMFIQT
Sbjct: 25  TVTSSSSSSLLLSRRSLFISATNLLNSRTKDSALPSLNSSLLAQKWNFLGGQRRTMFIQT 84

Query: 91  QPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTK 150
           Q TPNP+SLMFYPGK VME+GS+DFPN R+A+ SPLAKS++ IDGV RVFFGSDFVTVTK
Sbjct: 85  QSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDFVTVTK 144

Query: 151 SDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRI 210
           SDD+SWD+LKPEIFAAVMDFY+SGQPLFLD   AA+KDTAI EDDSETVAMIKELLETRI
Sbjct: 145 SDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRI 204

Query: 211 RPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVE 270
           RPAVQDDGGDI Y GFD E+GIVKL+MQGACSGCPSSSVTLKSGIENMLMHYV EVKGVE
Sbjct: 205 RPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVE 264

Query: 271 QELDEEEEE 274
           QE D E+EE
Sbjct: 265 QEFDGEDEE 273

[Close]

BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
Match: NIFU5_ARATH (NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.300e-92
Identity = 181/245 (73.88%), Postives = 203/245 (82.86%), Query Frame = 1

		  
Query: 35  SSSSLLSSFHASDSSYASNF-VNLKNS----PRHHLNLKPWGPF--LGQRRTMFIQTQPT 94
           SSSSLL S  +   S A++F VN   S       + +     PF  + QRRTMFIQTQ T
Sbjct: 23  SSSSLLISRRSLFISAATHFPVNFSESITTNASRNCSRSSSFPFNWIEQRRTMFIQTQST 82

Query: 95  PNPASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDD 154
           PNP+SLMF PGK VMEIGS+DFPN+R+AM+SPLAK++F IDGV RVF+GSDFVTVTKSDD
Sbjct: 83  PNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDD 142

Query: 155 ISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPA 214
           ++WD+LKP+IFA VMDFY+SGQPLFLD    A+KDTAIHEDDSETVAMIKELLETRIRP+
Sbjct: 143 VTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPS 202

Query: 215 VQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEL 273
           VQDDGGDI Y GFDTETGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQE 
Sbjct: 203 VQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEF 262

[Close]

BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
Match: NFU1_HUMAN (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo sapiens GN=NFU1 PE=1 SV=2)

HSP 1 Score: 237.7 bits (605), Expect = 1.600e-61
Identity = 122/229 (53.28%), Postives = 160/229 (69.87%), Query Frame = 1

		  
Query: 53  NFVNLKNSPRHHLNLKPWGP----FLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSD 112
           N   +K  P H    +P  P    F    R MFIQTQ TPNP SL F PGK V+E  + D
Sbjct: 28  NPYTIKKQPLHQFVQRPLFPLPAAFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLETRTMD 87

Query: 113 FPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTK-SDDISWDLLKPEIFAAVMDFYTS 172
           FP    A  SPLA+ LF I+GV  VFFG DF+TVTK ++++ W+LLKP+I+A +MDF+ S
Sbjct: 88  FPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFAS 147

Query: 173 GQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIV 232
           G PL  +E+ +     A  E+D E VAMIKELL+TRIRP VQ+DGGD++Y+GF  E GIV
Sbjct: 148 GLPLVTEETPSGE---AGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGF--EDGIV 207

Query: 233 KLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEEEEAAA 277
           +L++QG+C+ CPSS +TLK+GI+NML  Y+PEV+GVEQ +D+E +E  A
Sbjct: 208 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVMDDESDEKEA 251

[Close]

BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
Match: NFU1_MOUSE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus musculus GN=Nfu1 PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 3.500e-61
Identity = 120/221 (54.30%), Postives = 155/221 (70.14%), Query Frame = 1

		  
Query: 58  KNSPRHHLNLKPW----GPFLGQRRTMFIQTQPTPNPASLMFYPGKSVMEIGSSDFPNAR 117
           K  P H    +P      P     R MFIQTQ TPNP SL F PGK V+E  + DFP   
Sbjct: 31  KKQPLHQYVRRPLFPLRAPLCNTVRFMFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPA 90

Query: 118 TAMNSPLAKSLFGIDGVTRVFFGSDFVTVTK-SDDISWDLLKPEIFAAVMDFYTSGQPLF 177
            A  SPLA+ LF I+GV  VFFG DF+TVTK ++++ W+LLKP+I+A +MDF+ SG PL 
Sbjct: 91  AAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLV 150

Query: 178 LDESTAASKDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQ 237
            +E+     +    EDD E VAMIKELL+TRIRP VQ+DGGD++YRGF  E GIV+L++Q
Sbjct: 151 TEETPPPPGEAGSEEDD-EVVAMIKELLDTRIRPTVQEDGGDVIYRGF--EDGIVRLKLQ 210

Query: 238 GACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDEEEEE 274
           G+C+ CPSS +TLKSGI+NML  Y+PEV+GVEQ +D++E +
Sbjct: 211 GSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQVMDDDESD 248

[Close]

BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.600e-61
Identity = 119/196 (60.71%), Postives = 147/196 (75.00%), Query Frame = 1

		  
Query: 77  RRTMFIQTQPTPNPASLMFYPGKSVMEIGSS-DFPNARTAMNSPLAKSLFGIDGVTRVFF 136
           RR+MFIQTQ TPNP SL F PG  V+  G++ DFPN  TA NSPLAK LF ++GV  VFF
Sbjct: 64  RRSMFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFF 123

Query: 137 GSDFVTVTKSDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAM 196
           G+DFVT++K +   W L+KPE+FA +MDF+ SG P+  D    A  DT I EDD ETV M
Sbjct: 124 GADFVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMM 183

Query: 197 IKELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMH 256
           IKELL+TRIRP VQ+DGGDIV+ G+  E G+VKL+MQG+CS CPSS VTLK+G++NML  
Sbjct: 184 IKELLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQF 243

Query: 257 YVPEVKGVEQELDEEE 272
           Y+PEV+ VEQ  DE +
Sbjct: 244 YIPEVESVEQVFDEAD 255

[Close]

BLAST of Spo23927.1 vs. TAIR (Arabidopsis)
Match: AT3G20970.1 (NFU domain protein 4)

HSP 1 Score: 347.8 bits (891), Expect = 6.100e-96
Identity = 185/249 (74.30%), Postives = 204/249 (81.93%), Query Frame = 1

		  
Query: 31  SVVSSSSSLLSSFHASDSSYASNFVN--LKNSPRHHLN----LKPWGPFLGQRRTMFIQT 90
           +V SSSSS L     S    A+N +N   K+S    LN     + W    GQRRTMFIQT
Sbjct: 25  TVTSSSSSSLLLSRRSLFISATNLLNSRTKDSALPSLNSSLLAQKWNFLGGQRRTMFIQT 84

Query: 91  QPTPNPASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTK 150
           Q TPNP+SLMFYPGK VME+GS+DFPN R+A+ SPLAKS++ IDGV RVFFGSDFVTVTK
Sbjct: 85  QSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDFVTVTK 144

Query: 151 SDDISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRI 210
           SDD+SWD+LKPEIFAAVMDFY+SGQPLFLD   AA+KDTAI EDDSETVAMIKELLETRI
Sbjct: 145 SDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRI 204

Query: 211 RPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVE 270
           RPAVQDDGGDI Y GFD E+GIVKL+MQGACSGCPSSSVTLKSGIENMLMHYV EVKGVE
Sbjct: 205 RPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVE 264

Query: 271 QELDEEEEE 274
           QE D E+EE
Sbjct: 265 QEFDGEDEE 273

[Close]

BLAST of Spo23927.1 vs. TAIR (Arabidopsis)
Match: AT1G51390.1 (NFU domain protein 5)

HSP 1 Score: 340.1 bits (871), Expect = 1.300e-93
Identity = 181/245 (73.88%), Postives = 203/245 (82.86%), Query Frame = 1

		  
Query: 35  SSSSLLSSFHASDSSYASNF-VNLKNS----PRHHLNLKPWGPF--LGQRRTMFIQTQPT 94
           SSSSLL S  +   S A++F VN   S       + +     PF  + QRRTMFIQTQ T
Sbjct: 23  SSSSLLISRRSLFISAATHFPVNFSESITTNASRNCSRSSSFPFNWIEQRRTMFIQTQST 82

Query: 95  PNPASLMFYPGKSVMEIGSSDFPNARTAMNSPLAKSLFGIDGVTRVFFGSDFVTVTKSDD 154
           PNP+SLMF PGK VMEIGS+DFPN+R+AM+SPLAK++F IDGV RVF+GSDFVTVTKSDD
Sbjct: 83  PNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDD 142

Query: 155 ISWDLLKPEIFAAVMDFYTSGQPLFLDESTAASKDTAIHEDDSETVAMIKELLETRIRPA 214
           ++WD+LKP+IFA VMDFY+SGQPLFLD    A+KDTAIHEDDSETVAMIKELLETRIRP+
Sbjct: 143 VTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPS 202

Query: 215 VQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEL 273
           VQDDGGDI Y GFDTETGIVKL+MQGACSGCPSSSVTLKSGIENMLMHYV EVKGVEQE 
Sbjct: 203 VQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEF 262

[Close]

BLAST of Spo23927.1 vs. TAIR (Arabidopsis)
Match: AT5G49940.1 (NIFU-like protein 2)

HSP 1 Score: 64.3 bits (155), Expect = 1.300e-10
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1

		  
Query: 204 IRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 263
           IRP +  DGG++     D    IV++++QGAC  CPSS++T+K GIE  LM  +PE+  V
Sbjct: 97  IRPYLMSDGGNVALHEIDGN--IVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAV 156

Query: 264 EQELDEE 271
           E   DEE
Sbjct: 157 EALPDEE 161

[Close]

BLAST of Spo23927.1 vs. TAIR (Arabidopsis)
Match: AT4G25910.1 (NFU domain protein 3)

HSP 1 Score: 63.9 bits (154), Expect = 1.800e-10
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1

		  
Query: 204 IRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 263
           +RP++  DGG++     D    +V L++QGAC  CPSSS+TLK GIE+ L   +PE+  V
Sbjct: 96  VRPSLMADGGNVALHEIDGL--VVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSV 155

Query: 264 EQELDEE 271
           EQ L+ E
Sbjct: 156 EQFLESE 160

[Close]

BLAST of Spo23927.1 vs. TAIR (Arabidopsis)
Match: AT4G01940.1 (NFU domain protein 1)

HSP 1 Score: 53.5 bits (127), Expect = 2.400e-7
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 1

		  
Query: 198 ELLETRIRPAVQDDGGDIVYRGFDTETGIVKLQMQGACSGCPSSSVTLKSGIENMLMH-Y 257
           +L+   +RP +  DGG++       E G+V L++QGAC+ CPSSS T+  GIE +L   +
Sbjct: 91  DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKF 150

Query: 258 VPEVKGVEQELDEEEEE 274
              +K + Q  DEE ++
Sbjct: 151 GDALKDIRQVFDEEVKQ 165

The following BLAST results are available for this feature:

BLAST of Spo23927.1 vs. NCBI nr
BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
BLAST of Spo23927.1 vs. TAIR (Arabidopsis)

BLAST of Spo23927.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902166896\|gb\|KNA07288.1\|	3.9e-153	100.	hypothetical protein SOVF_1733...	[more]
gi\|731334392\|ref\|XP_010678203.1\|	2.2e-124	83.8	PREDICTED: nifU-like protein 4...	[more]
gi\|1009119405\|ref\|XP_015876364.1\|	2.5e-99	76.6	PREDICTED: nifU-like protein 4...	[more]
gi\|225464130\|ref\|XP_002264979.1\|	1.2e-98	76.5	PREDICTED: nifU-like protein 4...	[more]
gi\|698565498\|ref\|XP_009773276.1\|	2.1e-98	77.0	PREDICTED: nifU-like protein 4...	[more]

BLAST of Spo23927.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QKR9_SPIOL	2.7e-153	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CG89_BETVU	1.6e-124	83.8	Uncharacterized protein OS=Bet...	[more]
F6HVQ1_VITVI	8.6e-99	76.5	Putative uncharacterized prote...	[more]
B9SG71_RICCO	3.3e-98	76.8	HIRA-interacting protein, puta...	[more]
A0A0D2UWA7_GOSRA	3.3e-98	72.0	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo23927.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
NIFU4_ARATH	1.1e-94	74.3	NifU-like protein 4, mitochond...	[more]
NIFU5_ARATH	2.3e-92	73.8	NifU-like protein 5, mitochond...	[more]
NFU1_HUMAN	1.6e-61	53.2	NFU1 iron-sulfur cluster scaff...	[more]
NFU1_MOUSE	3.5e-61	54.3	NFU1 iron-sulfur cluster scaff...	[more]
NFU1_DROME	4.6e-61	60.7	NFU1 iron-sulfur cluster scaff...	[more]

BLAST of Spo23927.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT3G20970.1	6.1e-96	74.3	NFU domain protein 4	[more]
AT1G51390.1	1.3e-93	73.8	NFU domain protein 5	[more]
AT5G49940.1	1.3e-10	46.2	NIFU-like protein 2	[more]
AT4G25910.1	1.8e-10	46.2	NFU domain protein 3	[more]
AT4G01940.1	2.4e-7	37.6	NFU domain protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PRODOM	PD002830		coord: 204..263 score: 3.0
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 196..264 score: 2.1
IPR014824	Scaffold protein Nfu/NifU, N-terminal	GENE3D	3.30.1370.70		coord: 79..170 score: 6.4
IPR014824	Scaffold protein Nfu/NifU, N-terminal	PFAM	PF08712	Nfu_N	coord: 82..168 score: 6.3
IPR014824	Scaffold protein Nfu/NifU, N-terminal	SMART	SM00932	Nfu_N_3a	coord: 82..168 score: 6.1
IPR014824	Scaffold protein Nfu/NifU, N-terminal	unknown	SSF110836	Hypothetical protein SAV1430	coord: 80..170 score: 1.06
IPR017065	NFU1 iron-sulfur cluster scaffold homologue	PANTHER	PTHR11178:SF1	NFU1 IRON-SULFUR CLUSTER SCAFFOLD HOMOLOG, MITOCHONDRIAL	coord: 18..276 score: 4.2E
None	No IPR available	unknown	Coil	Coil	coord: 260..278 scor
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 18..276 score: 4.2E
None	No IPR available	unknown	SSF117916	Fe-S cluster assembly (FSCA) domain-like	coord: 181..269 score: 5.45

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding