Spo24012.1 (mRNA) | SpinachBase

Overview


Name	Spo24012.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RING/FYVE/PHD zinc finger superfamily protein
Location	SpoScf_00396 : 327886 .. 330447 (-)
Sequence length	1689

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAAGGAGAAGAACAAAAACAGAACCATTTGAATGCTTTCCTTAGCACTTCCATTCCCTTCCCTTCCCTTCTTAAACGACCTTACTCAATCTCTTGCTTCATCACCTTTCACGATTCCATTAATTCTTCAATTTTGAGGATTCTTTTCTTCTACTTTTTCGATTCATTTCCTCTTTTGTAAGTCACTTTCTCATTATTCTTGCTTTTTAATTCATTAAAATCTGTCATCTTTTTCTGTTTTCTGGGTTTTTTTTCAGTCCAACCGCCTTTTTTACATGCTTTTTCAGTTAGAATCTCTTTTTTATTTTTTATTTTTTTTGGGAAAGGTGAAGTACTTTTTGGATTAATTTCACAGCCTTTTCCTCCTTTTTTTTGGTATAGTATAATCTTATAATTTGGCAGTTTAATTGTAATTGTTATAGTAGTATAATTGAATAATAAAGGGGTTGTTAGAATTTTCAGGAGTTGTAAGAAGTGAATTATTCAAGAGTGAAAATTGAATAGATATAGTTGGTGTGGTTGTAAGATGGGTGATCATTTAGCGTTACTGGTGAACCGGTTGCTAACAGAATCAACTATACACGCCGCAATCGAGAGTCGAAACTGCGCAAAGGAGATTGAACAAGGCAAGGATATTGACTACTTTATGCCCAAGGAAGTTGATGATGACAGAGAGTTATCATCTCCTAGGAAATTGGTGGAGTGTAGAATTTGCCAAGATGAAGATTTTGATTCTAATATGGAGACACCTTGTTCTTGTTGCGGCAGTTTAAAGGTTGAGTACATAATTATGTTTGATGGGTTTCATTGAAGGCGATTAGTGTTTTGTATAATATACAAATACACCCATACATATACTTAACAAGTTGACATAATGGTTGCAGTATGCTCATCGTAGATGTGTACAGAGGTGGTGTAACGAGAAGGGTGACACCATTTGTGAAATATGCCACCAGGTTGGATTTCAATCTTATTTTGCCTCATCATTCCTTGTCTTTTCAGTTTGTACAACTCTGGTTACATGAACACGATACAGACAAATGTGCACGCTTGATGTTTAGTTTTTATTGCAGCAATTCAAACCAGGTTACTCAGCACCCCCACCTCTATTTCGATATGGACGTATTCCAGTGAATTTCAGGTAAATTTGTTAGTTATCAACTTATGATTACATGGAGTTGAAAGCTCGGTTAGATAGGATTGACTAACATGAAATTAGTACCAGAAGAAACTGGCAGATAAGCAGAAGAGAGTTGGGTCAGTCGTCACAGTTGATGGAAGCAGTTTCTTCAACTGATGAAACTCTTTTAGACTCTGACTTTGAACAACCTTGTTCAAGAAGTCTTTTGTGTCGATTTACTGTTGCAGTGATTGTAAGAACTCTTTCTCTGCTACGGAGTATTATTTTCTCAGTTATGATTTGTATCAACCTCTTTTATTTTACTTGCAACAACAGTTCATTGGTCTGCTGATTTTACGGCATACTCTGCCAATAATGGTTGGTGGTGCTGATGAGTTTGTTCTTCCTCTATTCATTGTAAGTAAATATTTGGTACCAAAAGACCTCGCTGAATAAACATTGTCCTTTAATTCTGATGTTAATGTTGTTTTAATTGGTTTCAGCTTGCACTACTCAGAATTGTAGGTATTTTAATGCTTGTGTATGTTACCATGATGGCAATTACTGGACTAAGACGACAGAGGAACCATGATGATGTATGTATCACGCATTACGTATTAACGCCTACTTGTTTGTTGTTTTAATATTAGTGGTTTTTCTACTACTCTACTTAATCTTTCCCATGTATTAATTAATAACTTACAGGAATCCCCTAGTATATCGGAAAATGAGCACTCTGATTTGCAACAACAGCCTTCTCATGTGATCCAAATATCATGATCCATCGCCACTAGAACCATTTATGGACTTATCTGCAGATCAATCTCACGACTGTGAACCAAATGATGAGGGCATTTTCACCCCTTTTTACGCAAGGAACACACGGTTTGACTTAATTAGTTTTGCCCAATACTTAAACCTACAGATACAGAACAATGTGTACATGAATATGTATATATACACAACAATATGTAATTGATGCTCCCACCTGTCAAGGTTGAGGTGAATACTAGATAAATCAAGTGTAAATAAATAGTGTGCCAGCATTCTTCTATCTTCTGCTGCATTTCTAGTACTACTGACTAGTATTTTTCTCGCTCCCTCGTAACTACCCTTATGCTTCCAAGATCGGTTCATGAAACCCATCTCCAATTCTCCACACTCTTTCAAACCCCAACATTTGACATATTTCATATTATTTCTACATTGACTTAGAGTTATTACATACCAAACAAGTTATTTAAGGACAGTGGTGCATAAGATATTTGCTACCAAAAGTTGGAAAAATAACAAATAAAGCCTGAATACTTGACTTGTGTAATTAAGAAAAACTAAACTATCTTAATTAGTGGCTACGTACTTGATTTTTCTTTTGCTATTAGTAGTAGCTAGTACGCAGGGAGTACTATATATGGTAAGTTATAATTTTGAAGAAACC

mRNA sequence

AAGAAAAAGGAGAAGAACAAAAACAGAACCATTTGAATGCTTTCCTTAGCACTTCCATTCCCTTCCCTTCCCTTCTTAAACGACCTTACTCAATCTCTTGCTTCATCACCTTTCACGATTCCATTAATTCTTCAATTTTGAGGATTCTTTTCTTCTACTTTTTCGATTCATTTCCTCTTTTGAGTTGTAAGAAGTGAATTATTCAAGAGTGAAAATTGAATAGATATAGTTGGTGTGGTTGTAAGATGGGTGATCATTTAGCGTTACTGGTGAACCGGTTGCTAACAGAATCAACTATACACGCCGCAATCGAGAGTCGAAACTGCGCAAAGGAGATTGAACAAGGCAAGGATATTGACTACTTTATGCCCAAGGAAGTTGATGATGACAGAGAGTTATCATCTCCTAGGAAATTGGTGGAGTGTAGAATTTGCCAAGATGAAGATTTTGATTCTAATATGGAGACACCTTGTTCTTGTTGCGGCAGTTTAAAGTATGCTCATCGTAGATGTGTACAGAGGTGGTGTAACGAGAAGGGTGACACCATTTGTGAAATATGCCACCAGCAATTCAAACCAGGTTACTCAGCACCCCCACCTCTATTTCGATATGGACGTATTCCAGTGAATTTCAGAAGAAACTGGCAGATAAGCAGAAGAGAGTTGGGTCAGTCGTCACAGTTGATGGAAGCAGTTTCTTCAACTGATGAAACTCTTTTAGACTCTGACTTTGAACAACCTTGTTCAAGAAGTCTTTTGTGTCGATTTACTGTTGCAGTGATTTTCATTGGTCTGCTGATTTTACGGCATACTCTGCCAATAATGGTTGGTGGTGCTGATGAGTTTGTTCTTCCTCTATTCATTCTTGCACTACTCAGAATTGTAGGTATTTTAATGCTTGTGTATGTTACCATGATGGCAATTACTGGACTAAGACGACAGAGGAACCATGATGATGAATCCCCTAGTATATCGGAAAATGAGCACTCTGATTTGCAACAACAGCCTTCTCATGTGATCCAAATATCATGATCCATCGCCACTAGAACCATTTATGGACTTATCTGCAGATCAATCTCACGACTGTGAACCAAATGATGAGGGCATTTTCACCCCTTTTTACGCAAGGAACACACGGTTTGACTTAATTAGTTTTGCCCAATACTTAAACCTACAGATACAGAACAATGTGTACATGAATATGTATATATACACAACAATATGTAATTGATGCTCCCACCTGTCAAGGTTGAGGTGAATACTAGATAAATCAAGTGTAAATAAATAGTGTGCCAGCATTCTTCTATCTTCTGCTGCATTTCTAGTACTACTGACTAGTATTTTTCTCGCTCCCTCGTAACTACCCTTATGCTTCCAAGATCGGTTCATGAAACCCATCTCCAATTCTCCACACTCTTTCAAACCCCAACATTTGACATATTTCATATTATTTCTACATTGACTTAGAGTTATTACATACCAAACAAGTTATTTAAGGACAGTGGTGCATAAGATATTTGCTACCAAAAGTTGGAAAAATAACAAATAAAGCCTGAATACTTGACTTGTGTAATTAAGAAAAACTAAACTATCTTAATTAGTGGCTACGTACTTGATTTTTCTTTTGCTATTAGTAGTAGCTAGTACGCAGGGAGTACTATATATGGTAAGTTATAATTTTGAAGAAACC

Coding sequence (CDS)

ATGGGTGATCATTTAGCGTTACTGGTGAACCGGTTGCTAACAGAATCAACTATACACGCCGCAATCGAGAGTCGAAACTGCGCAAAGGAGATTGAACAAGGCAAGGATATTGACTACTTTATGCCCAAGGAAGTTGATGATGACAGAGAGTTATCATCTCCTAGGAAATTGGTGGAGTGTAGAATTTGCCAAGATGAAGATTTTGATTCTAATATGGAGACACCTTGTTCTTGTTGCGGCAGTTTAAAGTATGCTCATCGTAGATGTGTACAGAGGTGGTGTAACGAGAAGGGTGACACCATTTGTGAAATATGCCACCAGCAATTCAAACCAGGTTACTCAGCACCCCCACCTCTATTTCGATATGGACGTATTCCAGTGAATTTCAGAAGAAACTGGCAGATAAGCAGAAGAGAGTTGGGTCAGTCGTCACAGTTGATGGAAGCAGTTTCTTCAACTGATGAAACTCTTTTAGACTCTGACTTTGAACAACCTTGTTCAAGAAGTCTTTTGTGTCGATTTACTGTTGCAGTGATTTTCATTGGTCTGCTGATTTTACGGCATACTCTGCCAATAATGGTTGGTGGTGCTGATGAGTTTGTTCTTCCTCTATTCATTCTTGCACTACTCAGAATTGTAGGTATTTTAATGCTTGTGTATGTTACCATGATGGCAATTACTGGACTAAGACGACAGAGGAACCATGATGATGAATCCCCTAGTATATCGGAAAATGAGCACTCTGATTTGCAACAACAGCCTTCTCATGTGATCCAAATATCATGA

Protein sequence

MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESPSISENEHSDLQQQPSHVIQIS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24012	Spo24012	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24012.1	Spo24012.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24012.1.utr5p.2	Spo24012.1.utr5p.2	five_prime_UTR
Spo24012.1.utr5p.1	Spo24012.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24012.1.CDS.7	Spo24012.1.CDS.7	CDS
Spo24012.1.CDS.6	Spo24012.1.CDS.6	CDS
Spo24012.1.CDS.5	Spo24012.1.CDS.5	CDS
Spo24012.1.CDS.4	Spo24012.1.CDS.4	CDS
Spo24012.1.CDS.3	Spo24012.1.CDS.3	CDS
Spo24012.1.CDS.2	Spo24012.1.CDS.2	CDS
Spo24012.1.CDS.1	Spo24012.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24012.1.utr3p.1	Spo24012.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24012.1.exon.8	Spo24012.1.exon.8	exon
Spo24012.1.exon.7	Spo24012.1.exon.7	exon
Spo24012.1.exon.6	Spo24012.1.exon.6	exon
Spo24012.1.exon.5	Spo24012.1.exon.5	exon
Spo24012.1.exon.4	Spo24012.1.exon.4	exon
Spo24012.1.exon.3	Spo24012.1.exon.3	exon
Spo24012.1.exon.2	Spo24012.1.exon.2	exon
Spo24012.1.exon.1	Spo24012.1.exon.1	exon

Homology

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BLAST of Spo24012.1 vs. NCBI nr
Match: gi|902225193|gb|KNA19979.1| (hypothetical protein SOVF_056410 [Spinacia oleracea])

HSP 1 Score: 518.1 bits (1333), Expect = 9.100e-144
Identity = 257/258 (99.61%), Postives = 258/258 (100.00%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60
           MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC
Sbjct: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60

Query: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120
           RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF
Sbjct: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120

Query: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF 180
           RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF
Sbjct: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF 180

Query: 181 IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESP 240
           IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESP
Sbjct: 181 IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESP 240

Query: 241 SISENEHSDLQQQPSHVI 259
           SISENEHSDLQQQPSH+I
Sbjct: 241 SISENEHSDLQQQPSHMI 258

[Close]

BLAST of Spo24012.1 vs. NCBI nr
Match: gi|731340973|ref|XP_010681681.1| (PREDICTED: uncharacterized protein LOC104896612 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 377.5 bits (968), Expect = 1.900e-101
Identity = 200/267 (74.91%), Postives = 227/267 (85.02%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCA-KEIEQGKDIDYFMPKEVDDDRELSSPRKLVE 60
           MGDHLALLVNRLLTESTIHAAIESRN A KE+E G++ +   P E +DD  LSSPRKLVE
Sbjct: 1   MGDHLALLVNRLLTESTIHAAIESRNQATKEVENGENFEPSKPNEDNDDC-LSSPRKLVE 60

Query: 61  CRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPL 120
           CRICQDEDFDSN+ETPCSCCGSLKYAHRRCVQRWCNEKGDT+CEICHQ F+PGYSAPPPL
Sbjct: 61  CRICQDEDFDSNLETPCSCCGSLKYAHRRCVQRWCNEKGDTMCEICHQPFRPGYSAPPPL 120

Query: 121 FRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVI 180
           FRYGRIP+N RR+WQISRR+L + SQLM+ V +TD  LL+SD E+P SRS+L RFTVAVI
Sbjct: 121 FRYGRIPINLRRSWQISRRDLVE-SQLMQEV-ATDHALLNSDIEEPSSRSILFRFTVAVI 180

Query: 181 FIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDD-- 240
           F+GLLILRHTLP MVGG +EFVL LFILA +R+ GIL+LVYVTMMA+TGLRRQ   D+  
Sbjct: 181 FLGLLILRHTLPFMVGGDNEFVLSLFILAAIRVSGILLLVYVTMMAVTGLRRQSYQDETS 240

Query: 241 ---ESPSISENEHSDLQQQPSHVIQIS 262
              E+ S  E+EH DL +QPSHVIQIS
Sbjct: 241 SVPETSSDEEDEHLDL-EQPSHVIQIS 263

[Close]

BLAST of Spo24012.1 vs. NCBI nr
Match: gi|720086217|ref|XP_010243775.1| (PREDICTED: uncharacterized protein LOC104587750 [Nelumbo nucifera])

HSP 1 Score: 286.6 bits (732), Expect = 4.400e-74
Identity = 156/270 (57.78%), Postives = 196/270 (72.59%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDY---FMPKEVDDDRELSSPRKL 60
           MGDH  LLV+RLLTEST+ AAIESRN +         D    F P ++D     SSPRKL
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNRSLHSTPSAVEDMTTQFSPDKMDTSHG-SSPRKL 60

Query: 61  VECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPP 120
           VECRICQDED DSNMETPC+CCGSLKYAHRRC+QRWCNEKGDT+CEICHQQFKPGY+APP
Sbjct: 61  VECRICQDEDVDSNMETPCACCGSLKYAHRRCIQRWCNEKGDTMCEICHQQFKPGYTAPP 120

Query: 121 PLFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQ---PCSRSLLCRF 180
            LFRYG IP+NFR NW+ISRR+L     +  A+ +TD   LD D+++     SRSL+C  
Sbjct: 121 QLFRYGGIPMNFRGNWEISRRDLHNPQFI--AMVATDRDFLDPDYDEYTVSTSRSLMCCR 180

Query: 181 TVAVIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRN 240
            VA+IF+ LL+LRHTLPI++ G +E   PLF+L LLR VGIL+ +Y+ + A+T L+R+R 
Sbjct: 181 IVAIIFMVLLVLRHTLPIVLSGIEECSFPLFMLLLLRSVGILLPIYIMVKAVTALQRRR- 240

Query: 241 HDDESPSI---SENEHSDLQQQP-SHVIQI 261
              E P++   SE E+   Q QP +H+I++
Sbjct: 241 QQQEIPTLITTSEGENQQPQLQPHAHLIRV 266

[Close]

BLAST of Spo24012.1 vs. NCBI nr
Match: gi|661896150|emb|CDP00728.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 282.0 bits (720), Expect = 1.100e-72
Identity = 147/253 (58.10%), Postives = 187/253 (73.91%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60
           MGDH  LLV+RLLTEST+ AAIES+N   +    ++ D  +   + D     +PRK+VEC
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESQNRLLQSVPLRNDDMAVDCTLKDTGADLTPRKMVEC 60

Query: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120
           RICQDED+DSNMETPCSCCGSLKYAHRRCVQRWCNEKGDT+CEICHQ FKPGY+APPP+F
Sbjct: 61  RICQDEDWDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTVCEICHQHFKPGYTAPPPIF 120

Query: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPC---SRSLLCRFTVA 180
           R G IP+NFR NW+I+RR+L     +  AV STD+ L+D D+++     SRS++C  +VA
Sbjct: 121 RLGGIPMNFRGNWEIARRDLNNPRLI--AVVSTDQNLIDPDYDEYAVSNSRSMMCCRSVA 180

Query: 181 VIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITG-LRRQRNHD 240
           +IF+ LLILRHTLP++V  A  + LPL +L LLR+VGI++ +YV M A+ G LRR+ N  
Sbjct: 181 MIFMVLLILRHTLPVIVNRAGNYTLPLILLLLLRVVGIILPIYVIMKAVIGVLRRRHNQV 240

Query: 241 DESPSISENEHSD 250
           + S S S    SD
Sbjct: 241 NVSLSSSSLSSSD 251

[Close]

BLAST of Spo24012.1 vs. NCBI nr
Match: gi|719961788|ref|XP_010254599.1| (PREDICTED: uncharacterized protein LOC104595509 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 280.0 bits (715), Expect = 4.200e-72
Identity = 151/271 (55.72%), Postives = 194/271 (71.59%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKD---IDYFMPKEVDDDRELSSPRKL 60
           MGDH  LLV+RLLTEST+ AAIESRN + +            F P ++D   ++SSPRKL
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNGSLQATASAVEAMATQFSPSKMDIS-QVSSPRKL 60

Query: 61  VECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPP 120
           VECRICQDED DSNMETPCSCCGSLKYAHRRC+QRWCNEKGDT+CEICHQQFKPGY+APP
Sbjct: 61  VECRICQDEDVDSNMETPCSCCGSLKYAHRRCIQRWCNEKGDTMCEICHQQFKPGYTAPP 120

Query: 121 PLFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQ---PCSRSLLCRF 180
            LFRYG IP+NFR NW+ISRR+L     +   + +TD + L  D+++     SRSL+C  
Sbjct: 121 QLFRYGGIPMNFRGNWEISRRDLHNPRFI--TMVATDRSFLSPDYDEYSVSTSRSLICCR 180

Query: 181 TVAVIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRN 240
           TVA+IF+ LL+LRH LP++V G  E+   L ++ LLR  GIL+ +Y+ + A+  ++R+R 
Sbjct: 181 TVAIIFMVLLVLRHALPVIVSGTGEYSFTLLMMLLLRTAGILLPIYIMLRAVIAIQRRR- 240

Query: 241 HDDESPSIS-----ENEHSDLQQQPSHVIQI 261
              E P++S     ENE S LQ Q SH+I++
Sbjct: 241 QQLEIPTLSTASEGENEQSQLQSQ-SHLIRM 266

[Close]

BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RM29_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056410 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 6.300e-144
Identity = 257/258 (99.61%), Postives = 258/258 (100.00%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60
           MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC
Sbjct: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60

Query: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120
           RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF
Sbjct: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120

Query: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF 180
           RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF
Sbjct: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF 180

Query: 181 IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESP 240
           IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESP
Sbjct: 181 IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDDESP 240

Query: 241 SISENEHSDLQQQPSHVI 259
           SISENEHSDLQQQPSH+I
Sbjct: 241 SISENEHSDLQQQPSHMI 258

[Close]

BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3Q3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g142750 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.300e-101
Identity = 200/267 (74.91%), Postives = 227/267 (85.02%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCA-KEIEQGKDIDYFMPKEVDDDRELSSPRKLVE 60
           MGDHLALLVNRLLTESTIHAAIESRN A KE+E G++ +   P E +DD  LSSPRKLVE
Sbjct: 1   MGDHLALLVNRLLTESTIHAAIESRNQATKEVENGENFEPSKPNEDNDDC-LSSPRKLVE 60

Query: 61  CRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPL 120
           CRICQDEDFDSN+ETPCSCCGSLKYAHRRCVQRWCNEKGDT+CEICHQ F+PGYSAPPPL
Sbjct: 61  CRICQDEDFDSNLETPCSCCGSLKYAHRRCVQRWCNEKGDTMCEICHQPFRPGYSAPPPL 120

Query: 121 FRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVI 180
           FRYGRIP+N RR+WQISRR+L + SQLM+ V +TD  LL+SD E+P SRS+L RFTVAVI
Sbjct: 121 FRYGRIPINLRRSWQISRRDLVE-SQLMQEV-ATDHALLNSDIEEPSSRSILFRFTVAVI 180

Query: 181 FIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDD-- 240
           F+GLLILRHTLP MVGG +EFVL LFILA +R+ GIL+LVYVTMMA+TGLRRQ   D+  
Sbjct: 181 FLGLLILRHTLPFMVGGDNEFVLSLFILAAIRVSGILLLVYVTMMAVTGLRRQSYQDETS 240

Query: 241 ---ESPSISENEHSDLQQQPSHVIQIS 262
              E+ S  E+EH DL +QPSHVIQIS
Sbjct: 241 SVPETSSDEEDEHLDL-EQPSHVIQIS 263

[Close]

BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
Match: A0A068TZG5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032793001 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 7.600e-73
Identity = 147/253 (58.10%), Postives = 187/253 (73.91%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60
           MGDH  LLV+RLLTEST+ AAIES+N   +    ++ D  +   + D     +PRK+VEC
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESQNRLLQSVPLRNDDMAVDCTLKDTGADLTPRKMVEC 60

Query: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120
           RICQDED+DSNMETPCSCCGSLKYAHRRCVQRWCNEKGDT+CEICHQ FKPGY+APPP+F
Sbjct: 61  RICQDEDWDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTVCEICHQHFKPGYTAPPPIF 120

Query: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPC---SRSLLCRFTVA 180
           R G IP+NFR NW+I+RR+L     +  AV STD+ L+D D+++     SRS++C  +VA
Sbjct: 121 RLGGIPMNFRGNWEIARRDLNNPRLI--AVVSTDQNLIDPDYDEYAVSNSRSMMCCRSVA 180

Query: 181 VIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITG-LRRQRNHD 240
           +IF+ LLILRHTLP++V  A  + LPL +L LLR+VGI++ +YV M A+ G LRR+ N  
Sbjct: 181 MIFMVLLILRHTLPVIVNRAGNYTLPLILLLLLRVVGIILPIYVIMKAVIGVLRRRHNQV 240

Query: 241 DESPSISENEHSD 250
           + S S S    SD
Sbjct: 241 NVSLSSSSLSSSD 251

[Close]

BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
Match: A0A061E7A1_THECC (RING/FYVE/PHD zinc finger superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_010811 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.500e-72
Identity = 151/268 (56.34%), Postives = 188/268 (70.15%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60
           MGDH  LLV+RLLTEST+ AAIESRN + +      +D   P       +LSSPRK+VEC
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNKSLQATASA-VDDTEPVNSSPKVDLSSPRKIVEC 60

Query: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120
           RICQDED DSNMETPCSCCGSLKYAHRRCVQRWCNEKG+T CEICHQ FKPGY+APPPLF
Sbjct: 61  RICQDEDEDSNMETPCSCCGSLKYAHRRCVQRWCNEKGNTTCEICHQHFKPGYTAPPPLF 120

Query: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQ---PCSRSLLCRFTVA 180
           + G IP+N R NW+ISRREL  S  +  AV STD  LLDS +++     +RS +C  TVA
Sbjct: 121 QIGSIPMNLRGNWEISRRELNSSRFI--AVVSTDRNLLDSGYDEYSVSNTRSFICYRTVA 180

Query: 181 VIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDD 240
           +IF+ LLI+RHTLP+M+   + +   LF+L +LR VGI++ +YV +  +TG  R R   +
Sbjct: 181 IIFMLLLIMRHTLPVMLSRINGYSFLLFMLFVLRTVGIVLPLYVLVKVVTGFYRHRQQQE 240

Query: 241 ESPSI-----SENEHSDLQQQPSHVIQI 261
              S+      E EHS +Q Q SH+I +
Sbjct: 241 TPASLFTQSDEEPEHSSVQPQ-SHIINV 264

[Close]

BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R8H2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G181200 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.200e-70
Identity = 149/270 (55.19%), Postives = 189/270 (70.00%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQG--KDIDYFMPKEVDDDRELSSPRKLV 60
           MGDH  LLV+RL+TEST+ AAIESRN + +       D   F P        LSS  ++V
Sbjct: 1   MGDHFVLLVDRLITESTLEAAIESRNRSFQATASVVDDTKVFNPSP---KLNLSSLGEIV 60

Query: 61  ECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPP 120
           ECRICQDED DSNMETPC+CCGSLKYAHRRCVQRWCNEKG+T CEICHQQF+PGY+APPP
Sbjct: 61  ECRICQDEDVDSNMETPCACCGSLKYAHRRCVQRWCNEKGNTTCEICHQQFRPGYTAPPP 120

Query: 121 LFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQ---PCSRSLLCRFT 180
           LF  GRIP+NFR NW+ISRREL  S  +  AV STD +LLDS +++     +RSL     
Sbjct: 121 LFHIGRIPMNFRGNWEISRRELNNSGFI--AVVSTDHSLLDSRYDEYLASTTRSLTGYRM 180

Query: 181 VAVIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNH 240
           VA++F+ LL+LRH LP+++ G+D+F  PLFI  LLR +GI++ +YV    +T L R+R H
Sbjct: 181 VAILFMLLLVLRHILPVLLRGSDDFSFPLFISILLRTIGIILPMYVIFKTVTALLRRRQH 240

Query: 241 DDESPSI-----SENEHSDLQQQPSHVIQI 261
            +   S+      ENE + +Q QP H++ I
Sbjct: 241 QETPNSLFAESEEENEVAIMQTQP-HIVNI 264

[Close]

BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
Match: MARH2_RAT (E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.400e-8
Identity = 21/61 (34.43%), Postives = 34/61 (55.74%), Query Frame = 1

		  
Query: 49  RELSSPRKLVECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQ 108
           R L +P     CRIC +     N+ +PC C G+L   H+ C+++W +    + CE+CH +
Sbjct: 53  RALDTPSDCPFCRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTE 112

Query: 109 F 110
           F
Sbjct: 113 F 113

[Close]

BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
Match: MARH2_MOUSE (E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.600e-7
Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 1

		  
Query: 49  RELSSPRKLVECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQ 108
           R L S      CRIC +     N+ +PC C G+L   H+ C+++W +    + CE+CH +
Sbjct: 53  RALDSQSDCPFCRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTE 112

Query: 109 F 110
           F
Sbjct: 113 F 113

[Close]

BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
Match: MARH3_XENLA (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.000e-7
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 1

		  
Query: 60  CRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPL 119
           CRIC +     ++ +PC C G+L   HR C++ W +    + CE+CH +F      P PL
Sbjct: 70  CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFSV-ERKPRPL 129

Query: 120 FRYGRIP 127
             + R P
Sbjct: 130 VEWLRNP 135

[Close]

BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
Match: MARH3_XENTR (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.000e-7
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 1

		  
Query: 60  CRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPL 119
           CRIC +     ++ +PC C G+L   HR C++ W +    + CE+CH +F      P PL
Sbjct: 69  CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFSV-ERKPRPL 128

Query: 120 FRYGRIP 127
             + R P
Sbjct: 129 VEWLRNP 134

[Close]

BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
Match: MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.000e-6
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 1

		  
Query: 60  CRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPL 119
           CRIC +     ++ +PC C G+L   HR C++ W +    + CE+CH +F      P PL
Sbjct: 71  CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFAV-ERKPRPL 130

Query: 120 FRYGRIP 127
             + R P
Sbjct: 131 VEWLRNP 136

[Close]

BLAST of Spo24012.1 vs. TAIR (Arabidopsis)
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 235.3 bits (599), Expect = 4.100e-62
Identity = 133/271 (49.08%), Postives = 171/271 (63.10%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKE---VDDDRELSSPRK- 60
           MGDH  LLV+RL+TESTI AAI+SRN   +          +P E   + DD+ L   R  
Sbjct: 1   MGDHFVLLVDRLITESTIEAAIQSRNQMLQAN--------IPVEECTILDDKTLEMLRNG 60

Query: 61  ---LVECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGY 120
              + ECRIC DED DSNMETPCSC GS+KYAHRRCVQRWCNEKGDT CEICHQ+FKP Y
Sbjct: 61  DLSMAECRICHDEDLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFKPDY 120

Query: 121 SAPPPLFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCR 180
           +APPPL   G +P++FR NW IS+RE          V   D T +D  +    + S +C 
Sbjct: 121 TAPPPLLELGHVPLHFRGNWGISQRE-----HRFITVVPADSTFIDQPYPLSSTTSFICC 180

Query: 181 FTVAVIFIGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQR 240
            ++ +IF+ LLILRHTLP+++ G++  V PLF L  LRI+GI++ +YV   A+   RR  
Sbjct: 181 RSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAVATCRRHS 240

Query: 241 NHDDESPS-ISENEHSD---LQQQPSHVIQI 261
              D SPS  S +E +D   L Q  S++I +
Sbjct: 241 RTLDTSPSDDSSDEETDSWRLPQTQSYIIGV 258

[Close]

BLAST of Spo24012.1 vs. TAIR (Arabidopsis)
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.100e-46
Identity = 100/237 (42.19%), Postives = 143/237 (60.34%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLVEC 60
           MGDHL L+V+RL ++S +     +   A  + +       + + +    +L    K V+C
Sbjct: 1   MGDHLVLVVDRLSSDSGLGTVNRADPKADSVNEDG-----VSESISAGADLCES-KFVQC 60

Query: 61  RICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLF 120
           RIC DED D+NM+TPCSC G+LK+AH  CVQRWCNEKGDT+CEIC QQ+KPGY+AP  LF
Sbjct: 61  RICHDEDEDTNMDTPCSCSGTLKFAHHNCVQRWCNEKGDTVCEICRQQYKPGYTAPRQLF 120

Query: 121 RYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDFEQPCSRSLLCRFTVAVIF 180
            Y  I +NF  +W I   +L     L    +  D  L    F  P   SL+C   +A++F
Sbjct: 121 HYTGISMNFGSDWGIEGLDLRNPYFLTWGDADDDHDLY--SFHSP--TSLICCRLIALLF 180

Query: 181 IGLLILRHTLPIMVGGADEFVLPLFILALLRIVGILMLVYVTMMAITGLRRQRNHDD 238
           + LL LRH+LP+++GG D+F + L +L L+R +GIL++ YV   +   ++R R   D
Sbjct: 181 VLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSFIVIQRCRQERD 227

[Close]

BLAST of Spo24012.1 vs. TAIR (Arabidopsis)
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 138.7 bits (348), Expect = 5.300e-33
Identity = 92/251 (36.65%), Postives = 137/251 (54.58%), Query Frame = 1

		  
Query: 1   MGDHLALLVNRLLTESTIHAAIESRNCAKEI--EQGKDIDYFMPKEVDDDRELSSPR--- 60
           M DHL+L  +RL+T  ++ +  +S +  +     QG D+      E +  RE  +     
Sbjct: 1   MADHLSLCTDRLITSESLDSEKDSDSSGESSYRPQGTDLASSSVNETEVPREYYAVADEE 60

Query: 61  ----KLVECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKP 120
               + VECRICQ+ED   N+E PC+C GSLKYAHR+CVQRWCNEKGD  CEICHQ ++ 
Sbjct: 61  EPLLQSVECRICQEEDSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQH 120

Query: 121 GYSAPPPLFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDF----EQPCS 180
           GY+APPP      I ++   +W+ +   L  +   + A+++ +   L++D+    E   S
Sbjct: 121 GYTAPPPPPPDETI-IHIGDDWE-NGVPLDLTDPRILAMAAAERHFLEADYDEYSENNSS 180

Query: 181 RSLLCRFTVAVIFIGLLILRHTLPIMVGGADE-FVLPLFILALLRIVGILMLVYVTMMAI 238
            +  CR + A+I + LL+LR  L +     DE      F L LLR  G L+  Y+   AI
Sbjct: 181 GAAFCR-SAALILMALLLLRDALNLTTNPDDEDDPTAFFSLFLLRAAGFLLPCYIMAWAI 240

[Close]

BLAST of Spo24012.1 vs. TAIR (Arabidopsis)
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 6.900e-33
Identity = 81/202 (40.10%), Postives = 122/202 (60.40%), Query Frame = 1

		  
Query: 43  KEVDDDRELSSPRKLVECRICQDEDFDSNMETPCSCCGSLKYAHRRCVQRWCNEKGDTIC 102
           ++VDD+ E     + VECRICQ+ED   N+E+PCSC GSLKYAHR+CVQRWCNEKGDT C
Sbjct: 63  RDVDDEEEPLI--QSVECRICQEEDSVKNLESPCSCSGSLKYAHRKCVQRWCNEKGDTTC 122

Query: 103 EICHQQFKPGYSAPPPLFRYGRIPVNFRRNWQISRRELGQSSQLMEAVSSTDETLLDSDF 162
           EICH+ ++PGY+APPP      I ++   +W  +   L  +   + A+++ +    D+D+
Sbjct: 123 EICHKSYQPGYTAPPPPPADDTI-IDIGEDWG-NGVHLDLNDPRILAMAAAERHFFDADY 182

Query: 163 EQ----PCSRSLLCRFTVAVIFIGLLILRHTLPIMVGGAD---EFVLPLFILALLRIVGI 222
           ++      S +  CR + A+I + LL+LRH L +    +D   +     F L +LR  G 
Sbjct: 183 DEYADSNSSGAAFCR-SAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFMLRAAGF 242

Query: 223 LMLVYVTMMAITGLRRQRNHDD 238
           L+  Y+   AI+ L+R+R   +
Sbjct: 243 LLPCYIMAWAISILQRRRQRQE 259

[Close]

BLAST of Spo24012.1 vs. TAIR (Arabidopsis)
Match: AT2G02960.5 (RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.200e-31
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 1

		  
Query: 16  STIHAAIESRNCAKEIEQGKDIDYFMPKEVDDDRELSSPRKLV--ECRICQDEDFDSNME 75
           S ++A +E       +   K +D       DDD +  +   +V  ECRIC DE    N+E
Sbjct: 2   SPVNAEVEEMRSESPVVNDKALDIS-----DDDHDDENEPLIVSGECRICSDESPVENLE 61

Query: 76  TPCSCCGSLKYAHRRCVQRWCNEKGDTICEICHQQFKPGYSAPPPLFRYGRIPVNFRRNW 135
           +PC+C GSLKYAHR+CVQRWCNEKG+ ICEICHQ ++PGY+APPP  +     ++    W
Sbjct: 62  SPCACSGSLKYAHRKCVQRWCNEKGNIICEICHQPYQPGYTAPPPPLQPEETTIDIGGGW 121

Query: 136 QISRRELGQSSQLMEAVSSTDETLLDSDFEQ----PCSRSLLCRFTVAVIFIGLLILRHT 193
            IS  ++     L  A++  +   L+S++ +      S +  CR + A+I + LL+LRH 
Sbjct: 122 TISGLDVHDPRLL--AIAEAERRYLESEYVEYTASSASGAAFCR-SAALILMALLLLRHA 176

The following BLAST results are available for this feature:

BLAST of Spo24012.1 vs. NCBI nr
BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
BLAST of Spo24012.1 vs. TAIR (Arabidopsis)

BLAST of Spo24012.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902225193\|gb\|KNA19979.1\|	9.1e-144	99.6	hypothetical protein SOVF_0564...	[more]
gi\|731340973\|ref\|XP_010681681.1\|	1.9e-101	74.9	PREDICTED: uncharacterized pro...	[more]
gi\|720086217\|ref\|XP_010243775.1\|	4.4e-74	57.7	PREDICTED: uncharacterized pro...	[more]
gi\|661896150\|emb\|CDP00728.1\|	1.1e-72	58.1	unnamed protein product [Coffe...	[more]
gi\|719961788\|ref\|XP_010254599.1\|	4.2e-72	55.7	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo24012.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RM29_SPIOL	6.3e-144	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8C3Q3_BETVU	1.3e-101	74.9	Uncharacterized protein OS=Bet...	[more]
A0A068TZG5_COFCA	7.6e-73	58.1	Uncharacterized protein OS=Cof...	[more]
A0A061E7A1_THECC	6.5e-72	56.3	RING/FYVE/PHD zinc finger supe...	[more]
A0A0D2R8H2_GOSRA	1.2e-70	55.1	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo24012.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
MARH2_RAT	9.4e-8	34.4	E3 ubiquitin-protein ligase MA...	[more]
MARH2_MOUSE	3.6e-7	34.4	E3 ubiquitin-protein ligase MA...	[more]
MARH3_XENLA	8.0e-7	34.3	E3 ubiquitin-protein ligase MA...	[more]
MARH3_XENTR	8.0e-7	34.3	E3 ubiquitin-protein ligase MA...	[more]
MARH3_BOVIN	1.0e-6	34.3	E3 ubiquitin-protein ligase MA...	[more]

BLAST of Spo24012.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT2G01275.1	4.1e-62	49.0	RING/FYVE/PHD zinc finger supe...	[more]
AT5G38070.1	1.1e-46	42.1	RING/FYVE/PHD zinc finger supe...	[more]
AT3G47550.3	5.3e-33	36.6	RING/FYVE/PHD zinc finger supe...	[more]
AT5G62460.1	6.9e-33	40.1	RING/FYVE/PHD zinc finger supe...	[more]
AT2G02960.5	2.2e-31	39.3	RING/FYVE/PHD zinc finger supe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 60..105 score: 3.2
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 59..106 score: 4.3
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 52..112 score: 21
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 58..110 score: 4.8
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 111..226 score: 1.7
None	No IPR available	PANTHER	PTHR23012:SF89	SUBFAMILY NOT NAMED	coord: 45..260 score: 1.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 58..110 score: 1.77

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding