Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCATCATCTTCCATTTTGTCAAACACCATTTCTTCATCTCTTAAAAACTGTCAAAAATCAAAATCTCTTGCATTTTCTCCTCTTAGATTTGGTCAGATTGGGGTTAAATCTTCTGGGTTTTCTCTCACTAATAAATCCCTCAAGTTTAAAGCTGCTAATCAGCTACCAGTCAGATCTTTTACTTGTAGAAGCTCTGCTGATCCTGCAGAATGTAAGTGTTAATTTCCTTTTTCTTACAAAATTCTTTTTTAATTTTTGATTTTAGAACTTTGTTGCTAATTTAATTGATTTTGTTGGGTGATTAGCAGCTGTTAAGGTTCATGAATTCTGTGTTTATGAGATGAATGAGCGCGATCGCGGTAGTCCTGCAGTTCTTAAACTTAGCCAGAAGCCTGTCTTTTCCCTTGGAGACTTGATTCCTTTCACCAACAAGGTATAAAGTTCTACTCTCTTTTTTTCTGCATGTTCTTCAATTTTCCTTTGTTTGTTGGAAAATCCTATGTTACTCAGACTCGGTTACTAGTATTCCAAATGTCCAACTTGCAAAGTTGTGATAATTTCCATGATTTTGGTAAAAAGAAAGTGTCAGAGTATCCATAACTCCGTACCCATATCCGAGTGTATTGGGGATCCGACATGGGTATTTGAGCCGAAATGAAGAGTCCTAGGAAAAATGTAAATTCTTGATCTTTTCTGGTATATTTTGACATGTTTAAAAGAAATTCAACTTCTATTGTGCATGATATAGAGAGTGATGGATAGCTCAGTTGGTTAGAGCTTCCATCCCTGTTCCACGTGATCCTGAGATGGATTCTCATCCCGGCTCCCTGTGGCTCATTCGCACCAAAAAAGAAATTATGTTGTGCATGATATAGCTTATTGGCAAATTCTTCGGTTCTTATTTGTCAATTGTCATACTTTTGTTAAACGAATACTATTGTTAAACAAAGACTAGAGTTTGTGTAAGTAAAAATCTAATAAGACCTGCTTTATTTTCTAAACTAATCAAAACCTAATAATATACAACATCAAAGCCGTAGTGACGTAGTCCCAAAATGATTTGGGGTCAGCTAACCTAAACCGTTATATATTGTCGATTTCTTAACAATAAGATTAAAATGATGTGTACAGAAAATTGACAGATTATGGTAATTAATAATTGTGATAAACAGTTATACACAGGGGACTTGGAAAAGAGGCTAGGAATATCAGCAGGAATCTGCATATTGATCCAAAACAAGCCAGAAATGAAAGGGGACAGATATGAGGCAATATTCAGCTTATACTTTGGAGATTATGGTCACATTTCAGTCCAAGGACCATACTTAACCTATGGTGAATCACACTTAGCCATAACAGGCGGTTCAGGGATTTTCGAGGGAGCGTATGGACAGGTGAAGCTGCAACAAATTGTGTACCCTTTCAAGATTTTCTACACATTTTACTTGAAGGGAATTAAGGGTGATTTGCCTAAAGAGCTTTTGTGTAAGCATGTTGAGCCACACCCGGATGTTGAGGCCTCTGCTGCTGCTAAGGCCACTCACCCTGAAGCTGCTATCCCTAATTTTACAGACTAATTTAGTGTTTAAGTGTTAAGTGAGTTGAGTTTATATGATTTGTTCCTTTAGGTTAAGGGGTGGTTTCTCTTGGTTGATGTTGATGTTGATCTTGTTCTAGTTTCTTAAGTATCAGGGAATGTAGCGGTTTTATTTGATGAATAAATTCTATTTGATGATCACCTTTGCTGTTATTGTTTTGATTTATTCCAGATCCCTCGATCGCTCATTGAATTAGTAAGACTTTATCGTTAATCATAAATGTAACATGATACCAATTGCTTGTTGGTTCAGTGGTGATTAGGGCTGAACTCGAACTTGGTAGGGCGAACCCGAGTTCGATCCCCCACAAGGCCACAACAACAATTAGAAGTGGACTAAAACCTATCCACTCATAACTCGCCCCGAATTCGGATTAGTGACCTCATCTCCAGCTGAACTTGGTAGGGCGAACCCGAGTTCGATCCCCCACAACAACAATTAGAAGTGGACTGAAACCTATCCACTCATAATTCGCCCCGATTTCGGATTAGTGACCTCATCTCCACATATTTCTAG ATGGCTGCATCATCTTCCATTTTGTCAAACACCATTTCTTCATCTCTTAAAAACTGTCAAAAATCAAAATCTCTTGCATTTTCTCCTCTTAGATTTGGTCAGATTGGGGTTAAATCTTCTGGGTTTTCTCTCACTAATAAATCCCTCAAGTTTAAAGCTGCTAATCAGCTACCAGTCAGATCTTTTACTTGTAGAAGCTCTGCTGATCCTGCAGAATCAGCTGTTAAGGTTCATGAATTCTGTGTTTATGAGATGAATGAGCGCGATCGCGGTAGTCCTGCAGTTCTTAAACTTAGCCAGAAGCCTGTCTTTTCCCTTGGAGACTTGATTCCTTTCACCAACAAGTTATACACAGGGGACTTGGAAAAGAGGCTAGGAATATCAGCAGGAATCTGCATATTGATCCAAAACAAGCCAGAAATGAAAGGGGACAGATATGAGGCAATATTCAGCTTATACTTTGGAGATTATGGTCACATTTCAGTCCAAGGACCATACTTAACCTATGGTGAATCACACTTAGCCATAACAGGCGGTTCAGGGATTTTCGAGGGAGCGTATGGACAGGTGAAGCTGCAACAAATTGTGTACCCTTTCAAGATTTTCTACACATTTTACTTGAAGGGAATTAAGGGTGATTTGCCTAAAGAGCTTTTGTGTAAGCATGTTGAGCCACACCCGGATGTTGAGGCCTCTGCTGCTGCTAAGGCCACTCACCCTGAAGCTGCTATCCCTAATTTTACAGACTAATTTAGTGTTTAAGTGTTAAGTGAGTTGAGTTTATATGATTTGTTCCTTTAGGTTAAGGGGTGGTTTCTCTTGGTTGATGTTGATGTTGATCTTGTTCTAGTTTCTTAAGTATCAGGGAATGTAGCGGTTTTATTTGATGAATAAATTCTATTTGATGATCACCTTTGCTGTTATTGTTTTGATTTATTCCAGATCCCTCGATCGCTCATTGAATTAGTAAGACTTTATCGTTAATCATAAATGTAACATGATACCAATTGCTTGTTGGTTCAGTGGTGATTAGGGCTGAACTCGAACTTGGTAGGGCGAACCCGAGTTCGATCCCCCACAAGGCCACAACAACAATTAGAAGTGGACTAAAACCTATCCACTCATAACTCGCCCCGAATTCGGATTAGTGACCTCATCTCCAGCTGAACTTGGTAGGGCGAACCCGAGTTCGATCCCCCACAACAACAATTAGAAGTGGACTGAAACCTATCCACTCATAATTCGCCCCGATTTCGGATTAGTGACCTCATCTCCACATATTTCTAG ATGGCTGCATCATCTTCCATTTTGTCAAACACCATTTCTTCATCTCTTAAAAACTGTCAAAAATCAAAATCTCTTGCATTTTCTCCTCTTAGATTTGGTCAGATTGGGGTTAAATCTTCTGGGTTTTCTCTCACTAATAAATCCCTCAAGTTTAAAGCTGCTAATCAGCTACCAGTCAGATCTTTTACTTGTAGAAGCTCTGCTGATCCTGCAGAATCAGCTGTTAAGGTTCATGAATTCTGTGTTTATGAGATGAATGAGCGCGATCGCGGTAGTCCTGCAGTTCTTAAACTTAGCCAGAAGCCTGTCTTTTCCCTTGGAGACTTGATTCCTTTCACCAACAAGTTATACACAGGGGACTTGGAAAAGAGGCTAGGAATATCAGCAGGAATCTGCATATTGATCCAAAACAAGCCAGAAATGAAAGGGGACAGATATGAGGCAATATTCAGCTTATACTTTGGAGATTATGGTCACATTTCAGTCCAAGGACCATACTTAACCTATGGTGAATCACACTTAGCCATAACAGGCGGTTCAGGGATTTTCGAGGGAGCGTATGGACAGGTGAAGCTGCAACAAATTGTGTACCCTTTCAAGATTTTCTACACATTTTACTTGAAGGGAATTAAGGGTGATTTGCCTAAAGAGCTTTTGTGTAAGCATGTTGAGCCACACCCGGATGTTGAGGCCTCTGCTGCTGCTAAGGCCACTCACCCTGAAGCTGCTATCCCTAATTTTACAGACTAA MAASSSILSNTISSSLKNCQKSKSLAFSPLRFGQIGVKSSGFSLTNKSLKFKAANQLPVRSFTCRSSADPAESAVKVHEFCVYEMNERDRGSPAVLKLSQKPVFSLGDLIPFTNKLYTGDLEKRLGISAGICILIQNKPEMKGDRYEAIFSLYFGDYGHISVQGPYLTYGESHLAITGGSGIFEGAYGQVKLQQIVYPFKIFYTFYLKGIKGDLPKELLCKHVEPHPDVEASAAAKATHPEAAIPNFTD Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo24067.1 vs. NCBI nr
Match: gi|902175484|gb|KNA08603.1| (hypothetical protein SOVF_161190 isoform B [Spinacia oleracea]) HSP 1 Score: 498.0 bits (1281), Expect = 9.300e-138 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of Spo24067.1 vs. NCBI nr
Match: gi|902175483|gb|KNA08602.1| (hypothetical protein SOVF_161190 isoform A [Spinacia oleracea]) HSP 1 Score: 491.9 bits (1265), Expect = 6.600e-136 Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Spo24067.1 vs. NCBI nr
Match: gi|731315704|ref|XP_010692616.1| (PREDICTED: allene oxide cyclase 2, chloroplastic-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 407.1 bits (1045), Expect = 2.200e-110 Identity = 204/249 (81.93%), Postives = 218/249 (87.55%), Query Frame = 1
BLAST of Spo24067.1 vs. NCBI nr
Match: gi|731315706|ref|XP_010692623.1| (PREDICTED: allene oxide cyclase 2, chloroplastic-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 403.3 bits (1035), Expect = 3.100e-109 Identity = 204/249 (81.93%), Postives = 218/249 (87.55%), Query Frame = 1
BLAST of Spo24067.1 vs. NCBI nr
Match: gi|470147833|ref|XP_004309482.1| (PREDICTED: allene oxide cyclase 3, chloroplastic-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 309.3 bits (791), Expect = 6.100e-81 Identity = 164/256 (64.06%), Postives = 191/256 (74.61%), Query Frame = 1
BLAST of Spo24067.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPJ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161190 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 6.500e-138 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 1
BLAST of Spo24067.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QMY9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_161190 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 4.600e-136 Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 1
BLAST of Spo24067.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D2V0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026470 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 2.200e-109 Identity = 204/249 (81.93%), Postives = 218/249 (87.55%), Query Frame = 1
BLAST of Spo24067.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QRT8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G046400 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 1.800e-79 Identity = 164/257 (63.81%), Postives = 196/257 (76.26%), Query Frame = 1
BLAST of Spo24067.1 vs. UniProtKB/TrEMBL
Match: A0A059BSG4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02479 PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 8.900e-79 Identity = 163/257 (63.42%), Postives = 195/257 (75.88%), Query Frame = 1
BLAST of Spo24067.1 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.900e-67 Identity = 140/252 (55.56%), Postives = 172/252 (68.25%), Query Frame = 1
BLAST of Spo24067.1 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 8.800e-64 Identity = 135/259 (52.12%), Postives = 174/259 (67.18%), Query Frame = 1
BLAST of Spo24067.1 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.300e-62 Identity = 129/254 (50.79%), Postives = 167/254 (65.75%), Query Frame = 1
BLAST of Spo24067.1 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.800e-62 Identity = 127/254 (50.00%), Postives = 164/254 (64.57%), Query Frame = 1
BLAST of Spo24067.1 vs. TAIR (Arabidopsis)
Match: AT1G13280.1 (allene oxide cyclase 4) HSP 1 Score: 256.5 bits (654), Expect = 1.700e-68 Identity = 140/252 (55.56%), Postives = 172/252 (68.25%), Query Frame = 1
BLAST of Spo24067.1 vs. TAIR (Arabidopsis)
Match: AT3G25780.1 (allene oxide cyclase 3) HSP 1 Score: 245.0 bits (624), Expect = 5.000e-65 Identity = 135/259 (52.12%), Postives = 174/259 (67.18%), Query Frame = 1
BLAST of Spo24067.1 vs. TAIR (Arabidopsis)
Match: AT3G25770.1 (allene oxide cyclase 2) HSP 1 Score: 241.1 bits (614), Expect = 7.200e-64 Identity = 129/254 (50.79%), Postives = 167/254 (65.75%), Query Frame = 1
BLAST of Spo24067.1 vs. TAIR (Arabidopsis)
Match: AT3G25760.1 (allene oxide cyclase 1) HSP 1 Score: 240.0 bits (611), Expect = 1.600e-63 Identity = 127/254 (50.00%), Postives = 164/254 (64.57%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24067.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo24067.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo24067.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo24067.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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