Spo24435.1 (mRNA) | SpinachBase

Overview


Name	Spo24435.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Auxin-binding protein 1
Location	SpoScf_00621 : 109158 .. 122762 (-)
Sequence length	1218

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCATTGCGATTTGCGAGAGCTCGAGCAGAAGCCGTGGAGAACCGCTGCGCGCGCTAGAGAGAAATGTGTAAGGCTTATCTACTTCCGATTGTGCTTCTCACTTGGGTTTTATTAGCAGTAACCCTTTTAGCTTCTGATTGCTCTATCAATGGTAACTTTTCAATTCTCATCCTACTTCTTCATTCCATTTTTTTACGGGTTTTTATTCTATTTTATTTATTCTTTATATAGTTTTTGCCAGCCATTTCATGTTAATTACCTAATTTTATATCTGGGTTTGTTTCAATTAGTTGGTTGTTCAATTGAATTACTGTTTTCCGCAATTTAAGTTCAATGCCACTATGCATATTTGATCCGTTAATTGAATTAGTGGAGAAGGGAAGGGAACATTGTTTTTTAGATTATGTATTGACTGTTGTTGATGATTAGTTAGGGTTTTAGTGGTTTGATTTTGGACAACAGTCTTGTCCTGAAAATGGTGTGTTCCCGGCCACCCGAGGTTTGTGTAAGAGTTCATGGTACTTTAGGAAAAAGAGAGGGGGAGGGAGGAGTCACAGGGTGCCTTTGATGAAATGGACAGGTACGACTTTTTCGATCACGTGCAGGTGTTAATGGTTGATTAGCAGTACATTTAACCATGTAACTAATCATTAAGACTAGTGTAGCGGTTAACTGACTAGCCTCGTTGTTTTCCCGGTATGGTTATTCAAGCTGTTTTACCATAATGGTCGATTGTATCTAACCGTTATTATTTATAATGTAATTTTAAGCATAGCTGTAATTGTTACCATTAACTGAGACGAAGTTTTTGGTCTTTATTACTAATTTATAGCTAACCGAACTGTTTTACCATAAACGGTGAACTTGGATAAAGGACGGGTTAAACAATTTGCACAGCTCTCTGCATTAGGGTACTACTGGAGTTTGGATTTTTTTACAACTTGTTGCATGATCTGTTAACTGTCATTTTGCATTTGGTAGGTAACATCTAGGTTGCACCAAAACGGATACGGATACGGACACAATACGGGTACGGGGATACACCATTTTAAAAATGACGGACACGGGGACACGGGAAATAATAATATTAAAATAATAAAATATAATATAAAAAAAAGATAAAATTACAATCATTTATAAAATAATATGCAAAAAGTAATTAAATTTATTAACGGCATTCAAATAAGAAAATAGAACTATTCTACACGATAATGACACGATAACCATCTCCTCCTACACCCCACATTTTTGTTCTTCCTTTGTAATAACTTTCACTCATTCTAGAAAGTAGACGGAGATTGTTGTGAACACCAATCCTTCATAAACATAAGATCATATTCATGTGATGATGGAGTAACCCACAAATGAGACCTTAATTAATGTCATGGTGGCTTGTGAATATGGTCATATGTTTATGAAGGTTGTTAATTAGGAGACATTCGAAAGAATTGTGAAAAAGAAAGAAGTAATTGAAATATGTGTTCAAGATGTGTCCAAAATGTGTCCATCGTGTATCCGGTCGTGTGTCTCGTGTACTAATTTTTCAAAAAGAACCGGACACGTGATTTCGCGTGTCAGACACATATTTTCGCGTGTCCAAGGCGTGTCGGTGTCCAATACGTGTCGGACACGGGACACGGCAGCCCAATGGCGTGTCCGTGCTTCCTAGGGTAACATTAGTATAACTAACATGCTAAAGCTTTCCCCTCAAAAAAATAAAATCAAGCTGAAGCTTTTGGGTGAGGTATTATTCTGATTTTCTCTGTTGCACACTGCGACCGGTTGGCAAGTGCAACTTTTTTTCTTGCTCCCACACTCCTTGTTCACATCTCCTACTCTCTAATTCCCATTTCTTGAGTTGTAGTAAAAACAGGTCAACTTATATTACATGTCATCGAATTATGAGAAAGCATTAGCTAATAAATAAGTACATATCAAGTGTATACTAATTTCAAAAACTGTCACGATGCAGATGCTTTTAAGACATTATGTGGCAAGTAATTTGATACCATCCTACCATTTTTCGGTATAGTACTAGCATCATCTTTTCCCAAATGCCGACATGAGATTCTGTATAGTTAATCCGACCCAAAAACAGTGTGTTTTGCCAAAAAAATCCCCAAGATTACTTTACTGAAGCAATAGTAGATGATACGTAAGTACGTAATGTCGCTAGCAGAAGTAAAATAAGCACCAAAGGAGGTTTTCCTTTATCTTTCCTGTCTTAATTTGTCTACCTAGAGCATGGGGTTCTGCTACGTGTAGTACTCTAAACTAGTCTCTAGTGCTCTACTGCACTAGCAAACATTTTGGCAAGTCACAACCTTGAGGAGAAGATTCTTAAAGCTCCTTGCTATCCTAGGTTGGGGTTTTAGAAGTACGAGCTTAGTATTAATCCGAGCTATTCTTGTTGGGTATTACTCCCTAATGGGTGCTAAGAAAGGAACTCTGTGGCATTTAGAGAATGAAGACAAGGTGATTTTATGGAGGGACACTTGGATTTTGGAGACGAAAACTTGGTTTTTGGGGTGGTATAAATGATTTGAAGGTCAATGGCATTCTTGATTATAGTATTGATAGTTGAAATATGCAGTAATTTCTAAGTCGTTTCTTCTGTTTGAGCAGGAGAGTATATAATCCTTTCCAATAGCCTTATTCTAGCAGGCTTTGAAGATGTGGAAAAATATATGGTTTTGGGAAAGGTCTTGAGTATAGTAGTGCTACTTGATCTATGCAGTGGATTTCTAAGAGTGGATAAGTTGTTTCTTCTGTTTGAGCAGGGGAGTATGTTAGCCATCCCGATTCGCCTTATTCTAAGAGGATGTTGAAGATGTGCAAAACATGATGGTTTTGGGGTTTGATTCCTAGGGCTAAGATTTTGCATAGAGAACATGTATGGAGCTTTTCCAATAAAGTGAGGGATGATCTGTCAGACCACAATGGGACAGGTTTTGTGTTTGTTATGGCGAGGAAGTGTCTCTATTACATGCTATTAGGGTCCGCAATTCTGCATCATTGCATAGGAGTTGTGGCTGGATGCTGATATAGTAAGGATTTGATTAAGGCTTGCAAAGCGGAGATTGATTCTCTTGGGAGGGCCTTTTTGACATTTGTTGGAGCATCGGGGCCTCAAATTGATGAACTTTTGAGGGTGAAGCAGCAACTCGTTGCATACTACAACTTACGTTGATAGAATGTATTCTAAGCCACTAGAGGTGTTGGAGAGGCTGTAGAGATTTAGTTGGGAGGTAGTGAAAAGTGGCTTATATCCATCATATTCAGGTATACTACATGTTAGATGCAAATAACTTTTGGAGGTCGGTACGCGGACTGGCGTGGTGGTAGACTGGTAGGTCAAAGTTTGTTCAACCTAAGTTCCTGAATTGTGTGCATTTGTTCAATGCGGTCATGATGGCAAGTTCCAAGTTCCAAGACCCATTTTGAATTGTATTTGAAAAAATCTCGTGAAACTGTCCACATATGATTGTAAGCAACTAAGCACAATATTAGAAGCTATTACTCCTTCCGAATACTCGCAACACTTTTGTTTGTGCGTAGTTTTAGGTAAGTTTGTGGTACTACATGAAAACGAATAAATTAAAAATGGGGTTAATAGTGATATTGTAATGGTTTATGTGAGAGAGAAACAATAAAGAATTGGTGCAAGTGGGGCAAAAAAGAAAGAAAAATAATAAAGAATTAGTGGTCCTATGCCAAAAGAGGAAGTGTTGCAAGTATTCACAAACAGCAGAAAGAGGCAAGTGTTGCAAGTATTCAGAAACGGAGGGAGTATTATTGGACTATTGCTGGCTCTACTGTGTGCTGGAGAAAAGGGCCTTTCTGATCCCTGCAGTAAGCAAAAAATATTGTGGAAATTATTCAGAAACTATACAAGATGGTATTTTATTGAGCGAAACTTAGTGTTGTCTTTCTGTTATTTGTTGCATAAAAACTTAAAAAGGATACTATTTATTGCGACGTTACTAACACCGGGCGTTTATCTAAAACTCTGACCTTTATAATGTTTAATGTTAGATATAAAGATGGAATACATTCTTTTTGTTGAATACTCATTAAAAGGAGATGAAGGTTTGGTGTAATGCAGGCAATCCATTATATTCGTCTCCCTGGCCTTCTTTGAGGTCTTGTTTCCTTTTGTTTATAGAAAGATTTTTAGGATGTAGATTTCATTTTCTTACTTTACCACGATCTTTGACATAGATGCATCATTTCTGACATGTATGGTATGTCAAGTAATGTTTAAAGAAAAATGTTTCTAGCACTAGATTCAGAAATCTACTGTCTTGTGTCCTTCAAATTATTAACTTGTACTAGTATATTACTTTTAGACCCAATAATTTCTTTTCAATAGTTTGCTATTGATGCAGGATTTCCACTAGTGAGGAATATAAGTGCGCTTCCACAAAGTAACTATGGTAGAGAAGGCCTCTCTCACATCACCCTGGCTGGGTCTCTCATCCATGGAATGAAAGAGGCAAGTCATATGGTTATTGCTATAGATTTTCATTCGCTGCTGATTTCTCCTTTCCGTAGTATCTAGAAGCTTTCAAGTTCCGTATTAACAAACATTATATACAAATATATATTTTCTAAAGGTGTGTTAATTATTTGGAATTCTCAGATGCTTTTGTATTTTCAAATATCAGACTGTCAGTCATTGATGAATGTGTTATTCTGTGTGAAAACTTGTCCTAGAGTCTGAACAGATATTGCTGTGGAGGTGTGTTGCTTTTTAATACTTGTGTTGTGGATAGGTCCGTGCTATGTTCTACTGATACCTAAGAAACCTTCTGAACATGTGCTAAAACCTTCCTTAGGTTTTTTGTCTTTTTATTGGAGGATAGGACTCTACACTTACCTTTCTTACAATTTGCACTTTCCAAAATAGTTGTGGCCTATGTGGGGTCTTGAAAGTCATGTAAGCCACCAGCCCACCAGGTTTGAACTTAAACATAGAACCAAGTTCAGCTCTTGAAACACACATGTAATATTTTTTGCTTGTCTAGCGCTTGATTACAATTTTTAAATTCAAGTCGACTCTTGGTGTTTGGTTTATTCGTGCGGTAAGTCTTTGGGTATGAATGCACGAGGGTTTGCGAAACTGGTTTATGAAGATTGTGGCAAGTATTTAGGAAGGCATACAAGAGTTTGAAAATGAAAGGGGTCTACAGTGATTGGCGTAAGTTGGATAGGATACGAAGTTCACAGAATGATAAGTTTTGTTGAAAACTCCCTCAATCTGTTCTTTTAAAGGTATAAATGATAGGATTACTCCAGGTTTATCAGTTTATTACTAAGAATGATAAGGTAGGTTGAGTAGTTAAGAGTTACAAACGAATGACAAAGTATTTAGAATAGGATTAGGGAAAGATGATCACGAGCCTTGGGTGTGTTACAGTGGCCAGTGAGAATGAAGATGATGGTTTCCTTTTTTTTTTCTTTAATAAATAAAGGAATCGTGCGACCAGGAATGAATGCACGAATGTTTTCGTTACTGGAATAATGTTTAGGAAACTAACTTTTTATTTTTTTGAGGGGATAAGAAACTAACTTTATAAAATACTAATATTTAGGAAATTAACTTTATAGAAAATTAAGCATATATTACTAAATACTTGTTTTAGTTATTGTTAAAATATATATATTGTTGCTAATAAAATATGGGCTATTACACTCCGCCCCCCTTATCCAGGTCTTCCTCTAGGTGCTTCTTTCGTCCAAGATCCATTTTTTTAAGGATGAAAAACTAAGCTCTACTTTAGAAAAGTGGAAGAAATTTGGAGTTCATTGTTTGGAGTTGAATATTTCTATGATACCAACTTGTGCCTTCTCTTATTGAATTGATAAGCTCGACCCTTTTCTGTAATAAACACTGTGAAACATGACAGAAGAATCTCAATTTTTGTGGTTGTTCTGGTTAACCACAAAAGCATACTGTTTGAGTGAGGTGATTGGAATCAGAACTTTTTAAGGGAATTATAATGGTTAGGTGTAAACAAAAGGTGACAATAATTAAGACGGTATGTAGAGATCACATTAGTATATGAAATTATGAATTCTTATGGTTGTGGTTTTAAGATCCCAATGGCCTAATTTTTGCATGTTTAATTTTGGCAGATAGAGATATGGCTTCAAACCTTTTCTCCTGGATCACACACACCAATTCACAGGCACTCATGTGAAGAAGTTTTTGTTGTCCTGAAGGGTACTGGTACACTCTATCTTGCTTCAGACTCGCATAGAAAATATCCTGACAACCCTAAGATGTATCCTGTCTTTGCAAACAGCACCTTCATTGTTCCTGTTAATGATGCTCACCAGGTAACTGATATGTGCCTATTTGGTGTTAATATCTAAATTGTTTATGGAAAATATGGGAACAATAGATGTGTTCTACCCAGATACTAGTCTATTCTCTTTGTAGTGGCTTTACTTCAGTTACCAAAATGACACAAAAAAGAATGTTCAATAATTTATTCTTCGAAGGTCACTGTATGTTACTAAGTGGACATCAGACATCAGAATACATGTCTCAATCTCATACACTGGGTTGGGAATAGATTGAACGGTGGTACCAAATCAGGCCTGTTAAGTCCAATTGGCTATTAAAGATGTTTTAGTACTCATACGAGTTCAAGGTTAGAACTCTAGAAACTCCTTGGATGGCTTGAGTTTTTGAGCTTTGGTGATCTTATTATCCCTCTTCGATAGAGATTTAACACAATTACACTAATGAAGTACTCTCTCTATTTCACAAAGATGGTTACACTTTACTTTTCACAAAAACCCAAAAAATGTTTAGAAGTAGTGGAATATTGTAAAAAAGGATAGTAGAGTAATGTAAGTAGTAGAATGTTGTAAGAAAAGATTAATAGCATAAGGTAAGTGGGGGAAAAGTGGAGAAAGAAGTAACAGACATAAGTCCAAAAACAGAAGAGGTGAAATGTAACCATATTTATGTAGCCGCTAAAAAAGAAAAGGTTAACCATCTTTGTGAAACAGAGGGAGTTTGAAATGTAGGATTAAAGTGCACTTGCTCACTTTAAAGATGTGTAAAAGAAAAAAGAGGATATGGAAAAGGACCAACCTTTAGTACAAGGAAAGTTTTAATTCGGAAGCCAAGGGTTGCTTTAAAAGTGAGGGTTTTTGAGTGGACATCTTTGGGTTTCGGCCCTGTATAATCACAGTAACTTTCACAAGGGAATCGAGACTCTACTGACATTTTTCATGATTGTTACAGAGGAAAGCAAAAGATCTAAGGCGGCGTTTGGTTGGGGGTCTTCAGGAAAGGGAAGAGATTGGTGGGGTTCCATTCCCTTCGTTGTTGTTTGTTTGGTGGTTTTTGTCATTCCCTTTACCCTCTTTTCTTCTTCACTTACCCCTAAATCCCTCTACAATGATACCCTACGCCCCCCAAGGTTTCCCATTCCCATTCCCTTGACCACCCTCTTTTCATAATAAATAATAATAATAATAATAATAAATAATAAATAATAAATAAGTGATAAGTGATAAGTAATACTCCCTCCGTTCCTTTAAGTTTTATCCATTTGGGAAAGTGGGGAGTTTTTAAGAAAATTGGAATCTTGGTTTGTATTGGTATAAGTGTAATGATTGGGTTTAAGAAAAATGATTGTATGTAAGAGATTATAATAAAAAAAGAAGAGAGAAAATAATAAAGAAATAAGGTAAGAGAGAGGAGTGATAATGATGGGTGATCAAGGAGGTGAGAGAGTGGGTATATGGGGAAGGGAAAAGAATTAAATAATAGGGGTGGGGAAATTTAGGTGGGAATATGGGTAGAATCTTTAGGTATTTTGGTAATTAGATAGAAATGTAAGGGTATTTTAGGATAAAATGTATGTCCAAACAGGGGCGCAGGAATTTATATATGGGGGTCCAAAAAACTTATGATTTTCTTTCATTTTAGTGGCTTAAAGTTGAAAGGTAAATAGTCAAAATATTATAAACGCCTTAATAAAATATGTGAAGATTTAAGAACTTTAATTTTATGTTTTCATAACAATAAAACTCAATAGAGATTGCAATTTAAAATGAAACGAGATTTTCATACTTTGAAGGAGATTTCCTTATTACGATAATTATATTGTCAATGAACAAATAGCACACAAAGACCCCGTGGGGTATTATAAATCTATATATGAATTAATTAATTAGACCTATAAAAATTCTAAGTAACATGCAACTATAAGTCTATAAAGGTGAAATATTACATCCTTTATTAGAAGTATATCTTATGGAAATTCCGAAAACTTTTTGAGAAAATATAACACTGCTATTTATTTTTTGTGTTTTATAAAGCAAAATCATGAATAATTATAGATTTATAGAAACAAAAACAATAAAAACTGGTGAAAAAAAACGACTTACAAAGGGAAAAACAAAAAAAGTGAAGAATTTAGAGGACTAATGAATGACAAATAAAAGATAAAAAAAATTGTGAAATTTTTTCTTTTATGGGGATTCGAACCCAACTCACTTGGGTAAAATATAAATCTTGCAACCATTAAGCCAAAGGTATTTCATTGTCATTAATGTAGGTTAATTAGATATATTTTAAGTATTAAAGTACAATTAATTACCTCAATATCAATTTTACAATTTTTTTGGGAAAATAATGGGGGTCCCTTTGGACCCCTCCGAGGTCACGTAGGTCCGCCCCTGTGTCCAAAAATAGAAACGGATACAACAAAAAGGAACGGAGGAAGTAAATAATAAGTAATAAATAATAAATAATAATAATAATAATAAATAATGAATTAGTAAATTAATAAATAGTATTTATTATTTATTTATTGTTATTATTATTATTTATTATTTATTATTTATTATTAATTATTAATTATTAATTAATTATTTTTATTGTTATTTATTATTTATTATTATTATTTTATTAATATTACAGAGTATTTATTATTATTTATTATTTATTATTTATTATTTTATTATATATTACAGAGTGTTTATCATTTATTATTTATTATTTATTATTTATTATTTTATTATTTATTATTTTATTATTTATTATTTTATTATTTATTATTTTATTATTTATTATTTTATTATTTAGGAGAAAGAATGGAGAAGAATGGGGAAACCAAACACCATTCTTAAACAAAGGGTTTTCATTCCATTCTCCTTGATTCTCATTCTCATTCTCTTTCCCTTTCCCCTTCTCCAACCAAACGGCCCTAACTATAGGTGACCTTCCCATAATAATTCTTACTACGGGTTATTCTAGTATAATCCAACCTAAGGGAGTGTCTTCCCAAAATAATCCCATGACCTGAACAAACCAGTATAGCAAGTCATTAGGCCACGTGTCACTAGGTGATTTGTATTCTTTATAGTGAGAGAACAAATGGAGATATTAACTTGTGTTGGTTGGTTGAACTTATTAGTTATTACAGTTCCTGTCTTACGCTTTGTTTCGTCGTACGGTAATGATGTTTGATAAGGATGAGGGATGAATGATTTAATGCAAGTGAGAAGTGTTGGTTTGTGATTTGGTGGCTGAGGAAACTTGTGGCCCGTGGAAATTGATGGGAATCAACGTTGGTTTAAGACTGAGATGCAAGGTTTGGTGGTGGCTGGGGCGTGTAGGGGTGGTTGAGGTGGCTGGATTGGTCGGGAGGGGGGTGGGTGTTAGTTAACTAGGCAGGGGTGGGATACATGGCAGAGTTTGGCAAGGGAGGGGGTTAGCTAGGCATGGAAGGGAAATGATAAGAGGAGAGAGAAGGGATGAAAAATTCAAAAAGAAAATGAATTACCAATTCAACTAGTTATTGGTAACTCGGATGGATTTTAGAAGATGCCCTCTAAGTTTTGGAATACATCAGAATAACCCATAGTTGGGTTTGTATTTGGAAGCCCCTCTATAGTTCTCAAAATTTCCAATCTAAAAAAAGACGGTGAAATATTTTCCTGTAAACTTTTAGAATTTTAAGTCGCTTGGCTAATTCTTTATTTTACTTAATCACAAATTCACATCCTTTGAGCTCCTGCACTATTCTTTTTGTTGTGGATGAAGAAGACTGAAATAGTGCCTTAGGAAGCAGAATAATCTTTCTTTATCTATGCAGGTTTTAGAGTCGGTGATGCCTTGGATATCTGTTTTTCCTGATTTCTTTGGTTCCATAGTTGTCTTGTTACAGTTCTTTTACGTGGAAGTTTATTTCGGATTAGCCTTCTTGAAAACCTGAAGTTCCTGTCCAACTCCATATGGGGAAGGGAGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGTTAACCTTGTTGAAGTCCCAGGTGGGCCAGGTGGTGTGGCTTGTCGAGAAACAGTGAGATTTTGTGGGCTGGAATAGAGACAAAAGATTATCATGGAGTTCAATGTCTTCTCTAGGGGGAATTGTATTAGACCTCTCTGCTGTGGACTTAGCTCTGTAGACAATAATGAAGAGTTGATAGGGAAATGAATTTTCTGGTGTTAGGAGGCTAGGATTGGTGAGCGTAGAAAATTTTCTTCTCTCGTGCCTCTCATGGAAGCAAATATTTGGAAGCTTGGTACTTTTCAGAGTTCATGTTCGCTAATGTTGGCAATAACTTGAATACGTGATTTAAATTATAGAAAGATCGGTTAATACTCTGAACTGAGAGGACCTATGACAAGTTTGCCTTAGAGAATAATGGCTTTAAAGTGTTTAGTCCTCCACCAGAGATGTAACTTGATCAACTGGCAAGCACTCGTCAACAGCAGTCTGTTATTGCGTTCTCCTTGTTCTTAATAATTTTGTGAAGAAGAGAGAAAGAGAAAGTGTCTCTAGTTTAACATTGTGACTATATTTGTTTACTTTGTAAGGTAATGGCTTAACATGGGGAAGTCTCGTCTTTAAAAACTCTGCTGCTTCGTGCCTTGTTTCTATTTCGTTATAATGTGTTGTATATTCCGCATCAGCAAATAGAATATGCAACTTCTCTAATTCTTCTCTTGCAATGACAATGGACAAATGTTTATGTCCCTTAACTTTGTTTTGAATGCACAGGTATGGAACACTGACGACAGCGAGGATCTGCAAATGCTGGTTATTGTATCACGTCCTCCAGTCAAAGTGTAACTTTCTTTTCTTAGTAAAGCACTGTAGTTTTCCTATTTTCGCCCACTTTTGAGCATGCTCTGAGGTCCAACCGTCCAATGAAGTACATATTTACATTCTTAGTAGTGTCATTTATTTGATTTGTTTTAAAAATATCTGCTTGACTTGTGAGAGAGTGGCGTGCTACCATTTTGCCGAATAGTTAGGATGTTCTTAACTACTTTAATCAAACTTCATTGCTTGAAGGTCTTGCAGATGAGCTTATATATAATCACTTGCTCAGTGCATCTGTTGTAAATTTTCTTGGGCATTTTTCATTACTAAACTTTTTGATGAATTAGATCTGCCTTCTTTTGATTCTAATATACCCCTATGCCCTATATCATATCAAATTTTGCAAAACCTATAGGATATGGAAGATCCATGGTGGTTGCACTAAAATTGGGGCTTGAGCAAAATATAAGAGCAAATTATTGATGATGTTTAAATATAAGAGCAAATTATTGATGATGTTTAAATATAAGAGCTTATGATAACTTGTGACGATGAAGATTTGGGGTGATACATTTTTTTTTATGGGTGAGAGGAGATTTTCATATATTGATGACATCTAGACTATTCTAGCTGAGCTTATCATGTATGCAGACATCTAAACTATATTATCTGCATATAAAACGTTAAACGAGTAATTTCCAATGTTACGAGCAATGTTGAAATTGGTTTTATTGAGATTCTTTTTGATGAATTAAAACATCAAGGCTGTTTTGAGAAAGCTTCATTACTGGAGGAATGGAGGGTGTCCAAAAGCAATCCCTCATTTTTTTCACATTTTTACTTTCTTTTTTGTTTCACGTTGTATCTTCTATTTAATGTTCTAGTTGAGCTTGAAATTATAAATGCAGCATCTGCTATCTCATCCGTTCTTTGTCTCGTTAAAAGATTAGCGATCATCAAATAAAATCTAATAGTATTCCCTTTTTCAGTGTCAGGTGTAATTGTGATTTGTGAAATTGTGATTGCCAAGCCATCTTCAGTTTCTAGTTTCAGGGTGTCTGATATATGCCATGTTAGCAAAGTAGGGTGAATCCTTTTTTGATTTGGAGAAAAATAATGGATAGATTAGTTCTGAGGTTGACATGCTTCGAAAATTTTGGCATGCCTGCCCCTCACCAGTCTTCTTTCACTATCAGCAAAGTTGGACATATGAGCTTAGCCGAAAGATCTGTCACGAGACATGATCTTGAAATGCGGGGAACTCAACCTATGATTTTCTGTTTATGTATTGCATGCACCCCTTTATGGTAGATCTTGATTACACAAGTATTCCATTGCAATATGCTTAATTTCTGTAATTTTGGTTGATTGGTTGCTGATCAAAGCACTGCATGAGTTAGTCTTGAGACATTCTTTAAATTTGAAGCAGAGATCCTTCTAATTTATAGTTACTGAAAACTTGGAATATATATCAACCCTCATTATAGTGAACAACCATGGGACGGTCTAGGAATGGAACGATTTACAGTGGAGCTTTTATTCTGATATTTCATCAAGATCGAGTGCTGACTTTAGGTTGCCGACTAATTGTGATAGACTGTTATTTCAGTGTTAATACCATGAAATACTTGAGCGCCATTGTTGAGTCACAATACCTGCTAGGGTTCGTATAATCTCGGTCTTGAATAGTATGAATGTGTTCTATTTGTATTTGCTGTATAGATCTTGAGAGGGATTCAGGCTTCTGGACAAATTATTAACTTTGATGTTTATGTTTTAGGTTCATATATGAAGACTGGTCCATGCCTCATACTGCAGCTAGATTGAAGTATCCATACTACTGGGATGAACAATGTTTCGACTCACCAGTAAGAGATGAGCTTTAAAACATTTTCACTCAGAAGCTTTAAGGAAATTATCTCTCTAACAAATTACAGTGCAACGAGCAAACAATTGGAGAAAAGTTTGTGTATTCGAAATTTCGAACTTGTAAGTAAATGCTCCTAATCTTGTATAGAGACTTGGTAACGTGCGTTGTTATGGTAATATAGAGAGATGTTTAAAAAAAATGTGTTTCTTTAAATGTACTCCTACCTTTTTTTTGGGTGCTTCTCCATATTTCAATCCTCCTTTTCTCCTCGGAAATGTAAAGTAAAGTTTCCTTTCTGAACTCAGTGTAGAAAATAGAAATCATCGGAATCTAAACTAGGGTTTGACATCTACCGTCCCACCATTGTTGATGACTCAAATGCTTACTTCTGCATACACCTGCAGCACGAAAAATCTATGTTTCAAAAATCTGGCTACCTGATTTTGAATAATCATAGGTCTGTTTCCTAGCTCCTTAATAAAGTAGACTTCAACCCTTGCTTCGTTGATGGGTTGATCAATTTGTCAAATATCTTTATTATCGTTGTCACTTTGCGAGTTACAACTTTAAACTTCTAAAATTGCGAAATACAAC

mRNA sequence

CCCGCCATTGCGATTTGCGAGAGCTCGAGCAGAAGCCGTGGAGAACCGCTGCGCGCGCTAGAGAGAAATGTGTAAGGCTTATCTACTTCCGATTGTGCTTCTCACTTGGGTTTTATTAGCAGTAACCCTTTTAGCTTCTGATTGCTCTATCAATGGATTTCCACTAGTGAGGAATATAAGTGCGCTTCCACAAAGTAACTATGGTAGAGAAGGCCTCTCTCACATCACCCTGGCTGGGTCTCTCATCCATGGAATGAAAGAGATAGAGATATGGCTTCAAACCTTTTCTCCTGGATCACACACACCAATTCACAGGCACTCATGTGAAGAAGTTTTTGTTGTCCTGAAGGGTACTGGTACACTCTATCTTGCTTCAGACTCGCATAGAAAATATCCTGACAACCCTAAGATGTATCCTGTCTTTGCAAACAGCACCTTCATTGTTCCTGTTAATGATGCTCACCAGGTATGGAACACTGACGACAGCGAGGATCTGCAAATGCTGGTTATTGTATCACGTCCTCCAGTCAAAGTGTTCATATATGAAGACTGGTCCATGCCTCATACTGCAGCTAGATTGAAGTATCCATACTACTGGGATGAACAATGTTTCGACTCACCAGTAAGAGATGAGCTTTAAAACATTTTCACTCAGAAGCTTTAAGGAAATTATCTCTCTAACAAATTACAGTGCAACGAGCAAACAATTGGAGAAAAGTTTGTGTATTCGAAATTTCGAACTTGTAAGTAAATGCTCCTAATCTTGTATAGAGACTTGGTAACGTGCGTTGTTATGGTAATATAGAGAGATGTTTAAAAAAAATGTGTTTCTTTAAATGTACTCCTACCTTTTTTTTGGGTGCTTCTCCATATTTCAATCCTCCTTTTCTCCTCGGAAATGTAAAGTAAAGTTTCCTTTCTGAACTCAGTGTAGAAAATAGAAATCATCGGAATCTAAACTAGGGTTTGACATCTACCGTCCCACCATTGTTGATGACTCAAATGCTTACTTCTGCATACACCTGCAGCACGAAAAATCTATGTTTCAAAAATCTGGCTACCTGATTTTGAATAATCATAGGTCTGTTTCCTAGCTCCTTAATAAAGTAGACTTCAACCCTTGCTTCGTTGATGGGTTGATCAATTTGTCAAATATCTTTATTATCGTTGTCACTTTGCGAGTTACAACTTTAAACTTCTAAAATTGCGAAATACAAC

Coding sequence (CDS)

ATGTGTAAGGCTTATCTACTTCCGATTGTGCTTCTCACTTGGGTTTTATTAGCAGTAACCCTTTTAGCTTCTGATTGCTCTATCAATGGATTTCCACTAGTGAGGAATATAAGTGCGCTTCCACAAAGTAACTATGGTAGAGAAGGCCTCTCTCACATCACCCTGGCTGGGTCTCTCATCCATGGAATGAAAGAGATAGAGATATGGCTTCAAACCTTTTCTCCTGGATCACACACACCAATTCACAGGCACTCATGTGAAGAAGTTTTTGTTGTCCTGAAGGGTACTGGTACACTCTATCTTGCTTCAGACTCGCATAGAAAATATCCTGACAACCCTAAGATGTATCCTGTCTTTGCAAACAGCACCTTCATTGTTCCTGTTAATGATGCTCACCAGGTATGGAACACTGACGACAGCGAGGATCTGCAAATGCTGGTTATTGTATCACGTCCTCCAGTCAAAGTGTTCATATATGAAGACTGGTCCATGCCTCATACTGCAGCTAGATTGAAGTATCCATACTACTGGGATGAACAATGTTTCGACTCACCAGTAAGAGATGAGCTTTAA

Protein sequence

MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24435	Spo24435	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24435.1	Spo24435.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24435.1.utr5p.1	Spo24435.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24435.1.CDS.5	Spo24435.1.CDS.5	CDS
Spo24435.1.CDS.4	Spo24435.1.CDS.4	CDS
Spo24435.1.CDS.3	Spo24435.1.CDS.3	CDS
Spo24435.1.CDS.2	Spo24435.1.CDS.2	CDS
Spo24435.1.CDS.1	Spo24435.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24435.1.utr3p.1	Spo24435.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24435.1.exon.5	Spo24435.1.exon.5	exon
Spo24435.1.exon.4	Spo24435.1.exon.4	exon
Spo24435.1.exon.3	Spo24435.1.exon.3	exon
Spo24435.1.exon.2	Spo24435.1.exon.2	exon
Spo24435.1.exon.1	Spo24435.1.exon.1	exon

Homology

[Close]

BLAST of Spo24435.1 vs. NCBI nr
Match: gi|902206196|gb|KNA15404.1| (hypothetical protein SOVF_096500 isoform A [Spinacia oleracea])

HSP 1 Score: 400.2 bits (1027), Expect = 2.000e-108
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1


		  
Query: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60
           MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI
Sbjct: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60

Query: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120
           HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA
Sbjct: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120

Query: 121 NSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQ 180
           NSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQ
Sbjct: 121 NSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQ 180

Query: 181 CFDSPVRDEL 191
           CFDSPVRDEL
Sbjct: 181 CFDSPVRDEL 190

[Close]

BLAST of Spo24435.1 vs. NCBI nr
Match: gi|902206197|gb|KNA15405.1| (hypothetical protein SOVF_096500 isoform B [Spinacia oleracea])

HSP 1 Score: 387.5 bits (994), Expect = 1.300e-104
Identity = 190/212 (89.62%), Postives = 190/212 (89.62%), Query Frame = 1


		  
Query: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60
           MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI
Sbjct: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60

Query: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120
           HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA
Sbjct: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120

Query: 121 NSTFIVPVNDAHQ----------------------VWNTDDSEDLQMLVIVSRPPVKVFI 180
           NSTFIVPVNDAHQ                      VWNTDDSEDLQMLVIVSRPPVKVFI
Sbjct: 121 NSTFIVPVNDAHQRKAKDLRRRLVGGLQEREEIGGVWNTDDSEDLQMLVIVSRPPVKVFI 180

Query: 181 YEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 191
           YEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL
Sbjct: 181 YEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 212

[Close]

BLAST of Spo24435.1 vs. NCBI nr
Match: gi|870843954|gb|KMS97029.1| (hypothetical protein BVRB_7g179440 isoform B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 305.4 bits (781), Expect = 6.700e-80
Identity = 134/161 (83.23%), Postives = 151/161 (93.79%), Query Frame = 1


		  
Query: 30  GFPLVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEIWLQTFSPGSHTPIHRHSCEEV 89
           GFPLVRNI+ LPQSNYGREGLSHITLAGSL+HGMKEIE+WLQTFSPGS TPIHRHSCEEV
Sbjct: 2   GFPLVRNINELPQSNYGREGLSHITLAGSLLHGMKEIEVWLQTFSPGSRTPIHRHSCEEV 61

Query: 90  FVVLKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPVNDAHQVWNTDDSEDLQMLVIV 149
           F+VLKG GTL+LASD H +YP +PK++P+FANSTFI+PVND HQVWNTD++ DLQ++VIV
Sbjct: 62  FIVLKGNGTLHLASDVHGRYPGHPKVFPIFANSTFIIPVNDVHQVWNTDNNADLQIVVIV 121

Query: 150 SRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 191
           SRPPVKVFIYEDW MPH AARLKYPYYWDE+CFD+PVRDEL
Sbjct: 122 SRPPVKVFIYEDWLMPHIAARLKYPYYWDEECFDTPVRDEL 162

[Close]

BLAST of Spo24435.1 vs. NCBI nr
Match: gi|870843953|gb|KMS97028.1| (hypothetical protein BVRB_7g179440 isoform A [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 303.1 bits (775), Expect = 3.300e-79
Identity = 141/188 (75.00%), Postives = 161/188 (85.64%), Query Frame = 1


		  
Query: 3   KAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHG 62
           K +L  +  L  +L   T L S     GFPLVRNI+ LPQSNYGREGLSHITLAGSL+HG
Sbjct: 51  KTFLSVLESLECLLSFATSLESS---KGFPLVRNINELPQSNYGREGLSHITLAGSLLHG 110

Query: 63  MKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANS 122
           MKEIE+WLQTFSPGS TPIHRHSCEEVF+VLKG GTL+LASD H +YP +PK++P+FANS
Sbjct: 111 MKEIEVWLQTFSPGSRTPIHRHSCEEVFIVLKGNGTLHLASDVHGRYPGHPKVFPIFANS 170

Query: 123 TFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCF 182
           TFI+PVND HQVWNTD++ DLQ++VIVSRPPVKVFIYEDW MPH AARLKYPYYWDE+CF
Sbjct: 171 TFIIPVNDVHQVWNTDNNADLQIVVIVSRPPVKVFIYEDWLMPHIAARLKYPYYWDEECF 230

Query: 183 DSPVRDEL 191
           D+PVRDEL
Sbjct: 231 DTPVRDEL 235

[Close]

BLAST of Spo24435.1 vs. NCBI nr
Match: gi|567903334|ref|XP_006444155.1| (hypothetical protein CICLE_v10022400mg [Citrus clementina])

HSP 1 Score: 299.3 bits (765), Expect = 4.800e-78
Identity = 136/192 (70.83%), Postives = 168/192 (87.50%), Query Frame = 1


		  
Query: 1   MCKAYLLPIVLLTWVLLAVTLLA--SDCSINGFPLVRNISALPQSNYGREGLSHITLAGS 60
           M +++L+  + L+++LL+  + A  S CSI GFPLVRNIS LPQ NYGREGL+HIT+AGS
Sbjct: 1   MARSWLI-FLCLSFILLSANIEADASHCSIKGFPLVRNISELPQDNYGREGLAHITVAGS 60

Query: 61  LIHGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPV 120
           ++HGMKEIE+WLQTFSPG+ TPIHRHSCEE+F+VLKG+GTLYLAS SH K+P  P+ +  
Sbjct: 61  ILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFF 120

Query: 121 FANSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWD 180
           FANSTF +PVNDAHQVWNT+++EDLQMLV++SRPPVKVFIYEDWSMPHTAA+LK+PY+WD
Sbjct: 121 FANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWD 180

Query: 181 EQCFDSPVRDEL 191
           EQC  SPV+DEL
Sbjct: 181 EQCLQSPVKDEL 191

[Close]

BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8U1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_096500 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.400e-108
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 1


		  
Query: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60
           MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI
Sbjct: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60

Query: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120
           HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA
Sbjct: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120

Query: 121 NSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQ 180
           NSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQ
Sbjct: 121 NSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQ 180

Query: 181 CFDSPVRDEL 191
           CFDSPVRDEL
Sbjct: 181 CFDSPVRDEL 190

[Close]

BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7C2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_096500 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 9.400e-105
Identity = 190/212 (89.62%), Postives = 190/212 (89.62%), Query Frame = 1


		  
Query: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60
           MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI
Sbjct: 1   MCKAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLI 60

Query: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120
           HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA
Sbjct: 61  HGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFA 120

Query: 121 NSTFIVPVNDAHQ----------------------VWNTDDSEDLQMLVIVSRPPVKVFI 180
           NSTFIVPVNDAHQ                      VWNTDDSEDLQMLVIVSRPPVKVFI
Sbjct: 121 NSTFIVPVNDAHQRKAKDLRRRLVGGLQEREEIGGVWNTDDSEDLQMLVIVSRPPVKVFI 180

Query: 181 YEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 191
           YEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL
Sbjct: 181 YEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 212

[Close]

BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B719_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179440 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.700e-80
Identity = 134/161 (83.23%), Postives = 151/161 (93.79%), Query Frame = 1


		  
Query: 30  GFPLVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEIWLQTFSPGSHTPIHRHSCEEV 89
           GFPLVRNI+ LPQSNYGREGLSHITLAGSL+HGMKEIE+WLQTFSPGS TPIHRHSCEEV
Sbjct: 2   GFPLVRNINELPQSNYGREGLSHITLAGSLLHGMKEIEVWLQTFSPGSRTPIHRHSCEEV 61

Query: 90  FVVLKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPVNDAHQVWNTDDSEDLQMLVIV 149
           F+VLKG GTL+LASD H +YP +PK++P+FANSTFI+PVND HQVWNTD++ DLQ++VIV
Sbjct: 62  FIVLKGNGTLHLASDVHGRYPGHPKVFPIFANSTFIIPVNDVHQVWNTDNNADLQIVVIV 121

Query: 150 SRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 191
           SRPPVKVFIYEDW MPH AARLKYPYYWDE+CFD+PVRDEL
Sbjct: 122 SRPPVKVFIYEDWLMPHIAARLKYPYYWDEECFDTPVRDEL 162

[Close]

BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BAP2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g179440 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.300e-79
Identity = 141/188 (75.00%), Postives = 161/188 (85.64%), Query Frame = 1


		  
Query: 3   KAYLLPIVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHG 62
           K +L  +  L  +L   T L S     GFPLVRNI+ LPQSNYGREGLSHITLAGSL+HG
Sbjct: 51  KTFLSVLESLECLLSFATSLESS---KGFPLVRNINELPQSNYGREGLSHITLAGSLLHG 110

Query: 63  MKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANS 122
           MKEIE+WLQTFSPGS TPIHRHSCEEVF+VLKG GTL+LASD H +YP +PK++P+FANS
Sbjct: 111 MKEIEVWLQTFSPGSRTPIHRHSCEEVFIVLKGNGTLHLASDVHGRYPGHPKVFPIFANS 170

Query: 123 TFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCF 182
           TFI+PVND HQVWNTD++ DLQ++VIVSRPPVKVFIYEDW MPH AARLKYPYYWDE+CF
Sbjct: 171 TFIIPVNDVHQVWNTDNNADLQIVVIVSRPPVKVFIYEDWLMPHIAARLKYPYYWDEECF 230

Query: 183 DSPVRDEL 191
           D+PVRDEL
Sbjct: 231 DTPVRDEL 235

[Close]

BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
Match: V4U035_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022400mg PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 3.400e-78
Identity = 136/192 (70.83%), Postives = 168/192 (87.50%), Query Frame = 1


		  
Query: 1   MCKAYLLPIVLLTWVLLAVTLLA--SDCSINGFPLVRNISALPQSNYGREGLSHITLAGS 60
           M +++L+  + L+++LL+  + A  S CSI GFPLVRNIS LPQ NYGREGL+HIT+AGS
Sbjct: 1   MARSWLI-FLCLSFILLSANIEADASHCSIKGFPLVRNISELPQDNYGREGLAHITVAGS 60

Query: 61  LIHGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPV 120
           ++HGMKEIE+WLQTFSPG+ TPIHRHSCEE+F+VLKG+GTLYLAS SH K+P  P+ +  
Sbjct: 61  ILHGMKEIEVWLQTFSPGTRTPIHRHSCEEIFIVLKGSGTLYLASSSHEKHPGKPQEHFF 120

Query: 121 FANSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWD 180
           FANSTF +PVNDAHQVWNT+++EDLQMLV++SRPPVKVFIYEDWSMPHTAA+LK+PY+WD
Sbjct: 121 FANSTFHIPVNDAHQVWNTNENEDLQMLVVISRPPVKVFIYEDWSMPHTAAKLKFPYFWD 180

Query: 181 EQCFDSPVRDEL 191
           EQC  SPV+DEL
Sbjct: 181 EQCLQSPVKDEL 191

[Close]

BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
Match: ABP1_TOBAC (Auxin-binding protein T85 OS=Nicotiana tabacum GN=T85 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 2.900e-75
Identity = 126/183 (68.85%), Postives = 152/183 (83.06%), Query Frame = 1


		  
Query: 9   IVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEI 68
           ++++  VLL  T  AS CSING PLVRNIS LPQ NYGR GLSH T+AGS++HGMKEIE+
Sbjct: 5   VLVVVAVLLFATAEASQCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEV 64

Query: 69  WLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPV 128
           WLQTF+PGS TPIHRHSCEE+FVVLKG G LYL   SH KYP NP+ + +F NSTF +PV
Sbjct: 65  WLQTFAPGSRTPIHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPV 124

Query: 129 NDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPV-R 188
           ND HQVWNT + EDLQ+LV++SRPPVKVF+Y+DWSMPHTAA+LK+PYYWDE+C+ +   +
Sbjct: 125 NDVHQVWNTGEHEDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWK 184

Query: 189 DEL 191
           DEL
Sbjct: 185 DEL 187

[Close]

BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
Match: ABP2_TOBAC (Auxin-binding protein T92 OS=Nicotiana tabacum GN=T92 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.500e-74
Identity = 125/183 (68.31%), Postives = 149/183 (81.42%), Query Frame = 1


		  
Query: 9   IVLLTWVLLAVTLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEI 68
           I++L  V    T  AS CSING PLVRNIS LPQ NYGR GLSH T+AGS++HGMKEIE+
Sbjct: 5   IIILVAVFWFATAEASHCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEV 64

Query: 69  WLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPV 128
           WLQTF+PG  TPIHRHSCEE+F+VLKG GTLYL   SH KYP NP+ + +F NSTF +PV
Sbjct: 65  WLQTFAPGFRTPIHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPV 124

Query: 129 NDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPVR- 188
           ND HQVWNT + EDLQ+L ++SRPPVKVF+Y+DWSMPHTAA+LK+PYYWDE+C+ +  R 
Sbjct: 125 NDVHQVWNTGEQEDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRK 184

Query: 189 DEL 191
           DEL
Sbjct: 185 DEL 187

[Close]

BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
Match: ABP1_ARATH (Auxin-binding protein 1 OS=Arabidopsis thaliana GN=ERABP1 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.200e-70
Identity = 126/188 (67.02%), Postives = 151/188 (80.32%), Query Frame = 1


		  
Query: 8   PIVLLTWVLLAV-----TLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHG 67
           PIV++  V L +     T L + C ING P+VRNIS LPQ NYGR GLSH+T+AGS++HG
Sbjct: 13  PIVVVFSVALLLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHG 72

Query: 68  MKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANS 127
           MKE+EIWLQTF+PGS TPIHRHSCEEVFVVLKG+GTLYLA ++H  +P  P  +P+FANS
Sbjct: 73  MKEVEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANS 132

Query: 128 TFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCF 187
           T  +P+NDAHQV NT   EDLQ+LVI+SRPP+K+FIYEDW MPHTAARLK+PYYWDEQC 
Sbjct: 133 TIHIPINDAHQVKNT-GHEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCI 192

Query: 188 DSPVRDEL 191
               +DEL
Sbjct: 193 QESQKDEL 198

[Close]

BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
Match: ABP4_MAIZE (Auxin-binding protein 4 OS=Zea mays GN=ABP4 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.200e-63
Identity = 108/158 (68.35%), Postives = 130/158 (82.28%), Query Frame = 1


		  
Query: 33  LVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEIWLQTFSPGSHTPIHRHSCEEVFVV 92
           LVR+IS + Q NYGREG SHIT+ G+L HG KE+E+WLQTF PG  TPIHRHSCEEVF+V
Sbjct: 49  LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108

Query: 93  LKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPVNDAHQVWNTDDSEDLQMLVIVSRP 152
           LKG GTL L S S  KYP  P+  PVF N+TF +PVND HQVWN+++ EDLQ+LVI+SRP
Sbjct: 109 LKGKGTLLLGSSS-LKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 168

Query: 153 PVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 191
           PVK+FIY+DWSMPHTAA+LK+PY+WDE C  +P +DEL
Sbjct: 169 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP-KDEL 204

[Close]

BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
Match: ABP1_MAIZE (Auxin-binding protein 1 OS=Zea mays GN=ABP1 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 7.500e-63
Identity = 113/178 (63.48%), Postives = 138/178 (77.53%), Query Frame = 1


		  
Query: 15  VLLAVTLL--ASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHGMKEIEIWLQT 74
           VLLA + L  A    +    LVR+IS +PQS+YG EGLSHIT+AG+L HGMKE+E+WLQT
Sbjct: 26  VLLAASFLPVAESSCVRDNSLVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQT 85

Query: 75  FSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANSTFIVPVNDAH 134
            SPG  TPIHRHSCEEVF VLKG GTL + S S  KYP  P+  P F N+TF +PVND H
Sbjct: 86  ISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSS-LKYPGQPQEIPFFQNTTFSIPVNDPH 145

Query: 135 QVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCFDSPVRDEL 191
           QVWN+D+ EDLQ+LVI+SRPP K+F+Y+DWSMPHTAA LK+P+ WDE CF++  +DEL
Sbjct: 146 QVWNSDEHEDLQVLVIISRPPAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA-AKDEL 201

[Close]

BLAST of Spo24435.1 vs. TAIR (Arabidopsis)
Match: AT4G02980.1 (endoplasmic reticulum auxin binding protein 1)

HSP 1 Score: 266.5 bits (680), Expect = 1.200e-71
Identity = 126/188 (67.02%), Postives = 151/188 (80.32%), Query Frame = 1


		  
Query: 8   PIVLLTWVLLAV-----TLLASDCSINGFPLVRNISALPQSNYGREGLSHITLAGSLIHG 67
           PIV++  V L +     T L + C ING P+VRNIS LPQ NYGR GLSH+T+AGS++HG
Sbjct: 13  PIVVVFSVALLLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHG 72

Query: 68  MKEIEIWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLASDSHRKYPDNPKMYPVFANS 127
           MKE+EIWLQTF+PGS TPIHRHSCEEVFVVLKG+GTLYLA ++H  +P  P  +P+FANS
Sbjct: 73  MKEVEIWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANS 132

Query: 128 TFIVPVNDAHQVWNTDDSEDLQMLVIVSRPPVKVFIYEDWSMPHTAARLKYPYYWDEQCF 187
           T  +P+NDAHQV NT   EDLQ+LVI+SRPP+K+FIYEDW MPHTAARLK+PYYWDEQC 
Sbjct: 133 TIHIPINDAHQVKNT-GHEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCI 192

Query: 188 DSPVRDEL 191
               +DEL
Sbjct: 193 QESQKDEL 198

The following BLAST results are available for this feature:

BLAST of Spo24435.1 vs. NCBI nr
BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
BLAST of Spo24435.1 vs. TAIR (Arabidopsis)

BLAST of Spo24435.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902206196\|gb\|KNA15404.1\|	2.0e-108	100.	hypothetical protein SOVF_0965...	[more]
gi\|902206197\|gb\|KNA15405.1\|	1.3e-104	89.6	hypothetical protein SOVF_0965...	[more]
gi\|870843954\|gb\|KMS97029.1\|	6.7e-80	83.2	hypothetical protein BVRB_7g17...	[more]
gi\|870843953\|gb\|KMS97028.1\|	3.3e-79	75.0	hypothetical protein BVRB_7g17...	[more]
gi\|567903334\|ref\|XP_006444155.1\|	4.8e-78	70.8	hypothetical protein CICLE_v10...	[more]

BLAST of Spo24435.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R8U1_SPIOL	1.4e-108	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9R7C2_SPIOL	9.4e-105	89.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8B719_BETVU	4.7e-80	83.2	Uncharacterized protein OS=Bet...	[more]
A0A0J8BAP2_BETVU	2.3e-79	75.0	Uncharacterized protein OS=Bet...	[more]
V4U035_9ROSI	3.4e-78	70.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo24435.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ABP1_TOBAC	2.9e-75	68.8	Auxin-binding protein T85 OS=N...	[more]
ABP2_TOBAC	2.5e-74	68.3	Auxin-binding protein T92 OS=N...	[more]
ABP1_ARATH	2.2e-70	67.0	Auxin-binding protein 1 OS=Ara...	[more]
ABP4_MAIZE	1.2e-63	68.3	Auxin-binding protein 4 OS=Zea...	[more]
ABP1_MAIZE	7.5e-63	63.4	Auxin-binding protein 1 OS=Zea...	[more]

BLAST of Spo24435.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G02980.1	1.2e-71	67.0	endoplasmic reticulum auxin bi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000526	Auxin-binding protein	PRINTS	PR00655	AUXINBINDNGP	coord: 106..119 score: 7.2E-75coord: 162..181 score: 7.2E-75coord: 119..134 score: 7.2E-75coord: 140..162 score: 7.2E-75coord: 75..99 score: 7.2E-75coord: 32..51 score: 7.2E-75coord: 52..72 score: 7.2
IPR000526	Auxin-binding protein	PFAM	PF02041	Auxin_BP	coord: 23..190 score: 2.2
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 32..178 score: 2.51
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 32..183 score: 5.3
None	No IPR available	PANTHER	PTHR37236	FAMILY NOT NAMED	coord: 5..190 score: 2.1E
None	No IPR available	PANTHER	PTHR37236:SF1	AUXIN-BINDING PROTEIN 1	coord: 5..190 score: 2.1E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0045793	positive regulation of cell size
biological_process	GO:0032877	positive regulation of DNA endoreduplication
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005788	endoplasmic reticulum lumen
molecular_function	GO:0010011	auxin binding
molecular_function	GO:0038023	signaling receptor activity
molecular_function	GO:0008270	zinc ion binding