Spo24634.1 (mRNA)

Overview
NameSpo24634.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionOuter envelope pore protein 21, chloroplastic (Chloroplastic outer envelope pore protein of 21 kDa)
LocationSuper_scaffold_172 : 1020092 .. 1031730 (+)
Sequence length977
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCCAAAAAAAACAAAAAGAAAAACCCTCATATCCGTTTCTCTCTCCTCTTCACCTTACCTTCTTCACTATTGTTGTGAGCGAAGTACGACGAGTGACGTCAGCAACCATGGAGACATCACTACGATATGGCGGTGATTCCAAATCTCTCAGAATGCATGCCAAGCAAAGGCTCCTCATTGACCCCGACACTTTCTTGCAGGTTTTCCTTCGTTTCCCCAACCACTTTTCAATTTTTATTTTCTACAGATTTATGTGGTTTAATGTTCATACACTTTATACGTGCATGTTACAGTTAATTGTTAGCTTCCATTTCTTCTGTAAATGTATTAGTATTGAATTAGGTTTTAGTGCTCTTAATTTGGTAGATAATGGTTGGATTTTCCTGCATTTTTGTTGGGTTTTTTTGAAAAAGAAAATTGGATTATGAGGTTTTGACTGGAAATTTCGCAGACTTATGATTCTAGTAGGAAAAGTTGTTCTAAATAATTTGTTGGTGAGGGGAATTTTATCAATTATCATGTTAGTATTCAGAAATTGCAGACCTCCCAGTTATGAATGGCTTAACAGAAGAATAGGAGGTGGGTTAACTGGGGTGAAGAGGAGGAATGCTAAACATCAAGTGGCAAGTGACTCAAATACAACCATTTTTAGTACCAATACATAATATGGCAGTACCAATAGCGCAAATAACTTGGATTGTTACTTCTTAGCAATGTATTGGTATACCAATACCATACTAGAGTTCGATACTAATACGAGTCACTTGTATCTATATGGAAACAAGCCACTTGAGGCTTAGAGTTCCTCGGGTAAAGAGAGAAATTACTGGTTTTTACAGGATAATACCCCGCCTTTCCAGCAGAATTGAATTGGGTTTGGTTGATTTCATTGAAGGTTATCTGAATGTTTGAAGATAACCCACTTATTCATTTACATTCTCAAGATGAAGCATGTCCGTTTTGTGGGGGTGAACTGCATTGTGCATTGGATAATGTTTCCTATGTGTTTACTGCTTCTTACCTAGGTTTTGAAGTATCGGTTGTACTTTTTTCATGATTCGTGGGAAAATTTTGTTCTTGAGTTGTTCCCTAGTCTGAGGCTCTTTGGGCTATATGCATTCGATCCCTCAATCTCTAGTTTATGTTGTATTTTGTTGTTTTCATATTATGATGTTCAATGGTTTTTTTTTTCTTTATTTCAGGTTCATGGAGAGTTAGATACAAGATACGGGTCACCAAACTATTTCTGTGCAATGTTGAGGCGCTTCTATAATGTATGTGCTTATCATAGTAAGCTATGTTGTTTTTAGTGATCCCAGTTTATAAGTTTCATTTTCTTCTTCCTCTTTGCGATACTTACTATGTTGTTTTTAGTGATCCCAGTTTATAAGTTTCATTTTCTTCTTCCTCTTTGCGATCTAAGCCGCTCTATGCTCAAACAAATCAATCTATGTTCAGTGAAAAAATTATGGTGCCCTTTATATAATTGTGTGAAGTGTTTGATTTAGCAAATATTATTTGATTATTTGACAATCTGAACCGGGATAACTTCTTGTTATCCTTCCTCTTTGTTTACATGTTGACTATTTTAATTGACAGCAACCACAGCTGGCTTCCAGTTTTGGCTTGGGAGTGCAATTTGATAAGCATGAGAAGCTTGGATACATTGTTCGTGGTAAAATGGCATTCCCTGTGACATCTAATGACTCGATTAGCTTTAACGTCAAGGGGCGATGCGAGATTGACAAAGAGTTTAAGCAGGTTAGGCTTGGTTTATAATTTCTGTTTAAATTCTTACTATGTTGATGCATTCTGGAGCATCCTCATTTGTGGTTCAAGTTGGTGACATCCGTCATTTGTGGAGCTAGGGGATATAATGAAAAGGAAAAATTCATTATGTTTGAAAAACATAGAAAGAGATTGCTGTCAAAGTTGGGAGGGATACGGACTAACTTTGGTAATTAAATTAGATTACTTCCATGTAAATCATGATTGATTTTGCAGAGGCACCCCCTCTTCACATTTATTAGGGGATAATAAATGCTTCTTTATACTGCATCAAATTTTGCTAATTTTATTTAGGTGAAAAGCTTGATGATCTTTTTAATGTTAGTTGCTTATTTGCTTCCCATCTCTTCTGTAGAAGCGGGCAAGGGGAGGCGCTGAATTCACCTGGAGCATCTTCAATTTTCAAAAGGAACAAGATATGAGGTTCAAGGTTGGGTATGAGATCAATGACAAGGTAGGAATAATTGGTCTCATCTCCAAATTAAAGAGTTCGTTATGTTTACTGCATAAAACCTGACTTGAAGTATGACTTACAATAGGTCGTTACTCGTTACTCGTTAGTTGTTCACATTTAATTTTATATATTTATTGCTCACAGTCCTGTTATTTAGTAAATGATATACGGGTAACAGTGGTAATTACAATGGTTCAATAAAGCATAATATATTCGACCTTCTTATAGTAAAGTACTCGTATAACCTTTCTTCACTGATTTTCGCTGTGTTGAAGGCTTGAAACCTAATTGCTGATATTAAAGATTAATGATCGTATTTGAGTTGATGCGATATCAATGCATTTGTACTTCCTTGGACCATTTACAGGACAATTTAATTTTGTGCACTCTCTAGTTTATAAGAATTCTGGAGGAATAGGCCGATCCAAAATTTCAAGAAATAAATTGTTCATTCTTGAGCGTCCTAGAGGAGTTCAGGAATTTTCTTGCCTCCATGGCTTGTGTTCATATATGTGCGCACTTGAGGTGGCTGCCTGCCTCTTATTGTTATGCTCAAGCGATGTAGTATTTAATTGTGGACCCCGTTATTGGATTCCCCCCATGGCCCTATGTATTTAAATGATATCAACTGAGCTGTTTCATGTAAACTTTGTCCGTCATTTAAGTTAGGAGTTGTTAAGAAGGTTACGATAATTTTACTTGTCTCTCCTGATGTAGTAGACTCTGCAACAAGTCTCTTTTGTTGTCCTTGTGGAAATATAGGATACAATATAATTGTTAATGTATGAATTGGATCTACTGAAGTTTTTCCAGCTTCTCCTTACCGCTTGGTAGTGTAGTGGAAGTATTGAGTGGGAATTCAGCTGCAAGAAGACTAAAATGATTGGGAAAATAGAGAGAAAAAGAATGTTACTTTGAAACTGAATTCTCATATACTCCCTTTATCCTTTACTCAGTGTCACCATTCCCAAAAGTGATTTAGGAACAAGCTTCCAGAGGGGGATATCTTAGAAAGATTAGCAACAAAACTTCCTCCTTTTTAGGCAGTGACATCATTTTTGGCTTGATACGTAAGTTACTATCTGATACCGTATTTAAAAAAACTAAGGCAATTGAGCAACTAATGTCTTTGATATCATCCAGAAGAGAATCAGGTTTATAGACTCCATTTGGCTTTCTACTTCAAGGATTTTTTAATATTGTTTTTTAATTCATTTTGCAAATAGTTACTCTGGTCCCACATCAAGTTTCTTTTCAATTTTTTCATGACATATTAAGGATGCCCATGTGACTAGTTTTCTTTCGTGACACACGTGTCCCTATTAGAACATCTACTACTACAAACAACAAATCATAGGGTATGTATTTGAGTACACATATGACTTTATTACCTTAAAAAGGAAAGAGGAACTTCTTTTGGGACATTCCAAATTAGTATTAGGATACTCTTTCAATTTTCAGATACTGGCAACGGATCCCATTTTCGAAATTTCCAATTTTGTGAAACATACTCTATTTGATATGTTGTTTGTCGTTTGCCTCTTTCTCTGTTACTTTCTCCAGATTTCCTCTCTCTCCCTCTCCATCCTTTATGTCTCCTTCATTTTCGTGCCATACCTCTATAGAATTAATAGTTTAAGTAACAAAAAATGAGCGTGGGGTGTTGTGTGTGTGGGGACAGTGGGGGGTGGGGGTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCTTAGTTTCCATGATAAATGTTTGAGAGGACTACGTGAGGCCTAGTCTTACAATGTGAAGAGCGACATTAATCCGTCTCGACTTTCCAGGGAGATTCATTTGGTCATCTATTCATTTCTTATAATCTCGACTATCTTCTACTGCCTCCTTTCAAATCTCTACTCATTTACTGAAGAGAGAGTAACGGTTGTTGAACCCAATGTTACCCACATATGAGTTGTCATACATTGGAGAAAGATGAGAGAAAATATCAACTTATAAGCTTGAGGAGTTACCCCCACTATTGTCAATTGGTTTTAGTGTAGAACCTCTTTTTGGCTTATAAGTGGACTGAACTCTCCTTCTCCTTATTAGGTTGCCTTGGCCCATATATTATTTGAACCCAGTTGGGCCTTTCATAATTCACTGGTTAAGGGACCTCTATTGGATGTTCATTCCCAATGAGGGGTAGTTGTCCCACATTGGAAAAGAGAAGAGAAAATACTAATTTATAAGCTAGGAAGCACCCATCTGACCTGCGTATCCCGTGTCGGGACACGGATTGGATACGATACTCCGATCAAGTGTCCGACTTTTTTTTGAAATATTTGGACATGGGGTCACGGACCGGATAAACGGTTGGACACACTTGTTGGACACATTTTAATATTAGACAAAATTTCAAATTTTTAATTCTTTTTTCAATTTTTTCAAAGGTCCAATGCGTGTTTGTAAGTCCACAAACTCATTCTCAAAGACTCAACCCTCACACTCTCTGTTGTTGACTTGTTGTGGTGCAACCGTCAATATATACTTCACTCGATCTATAACCCATCTCCATCTTCTTGTTGCTTTCGTACGTTGTCTTAATTGGTAAGCATATATTTGTATTTTAAATATAAAAGGTAAATATATGATATATGCAACTTCGTATGTGTAATTAATCAATTGTGTTACTTACATATTTGGTGATTGTAATTGGGAAGTAAAATAAAATACTTTGTATTAATGGCAAAAAAAATATTGTTTTTAATTATGATTGTGATTTTTTTTATATATATTATATTATTTTATTATTATTTCCCATGTCCACGTGTCTGTCATTTTTTAGATTGCGTTTTCCTGTTTTGGTGTCCGTTTTCGTTCAGCCTAGCTTATAAGCTTGAGAAGTTACCCCCACTATTGTCGATTGGTTTTAGTATGCAACCTCCATTGGGCTTATAAGTGGATCTAATTCTCCTCCTTATCGAGTTGCACGGGCCCATTTCATGTTCTCTGGGATTTAACATGGGTTTAATTAATATTATTAAGATCTCACAAGGTATGAGATTATTAGGAAGAAAGTAAGGGTTGCACCAATTGAGTTTAAGATGATGGAAAATCGTTTAAGATGGTTTGGACATATAAGCCGAAGATCAAGTGATGCCTCGGTTAGGAGGATAGGAGGGTGGCAAAGTGATAGAATTGCATGGGGTAAGGGAAGACCTAAGAAAACTTGGAGAAAGGTGATTGAGCACGATATGAGATTTCTTGGGATTGAGGAAAATATGGCGTTGGATAGGACAGAGTGGAGGGAGAGAATATACATTGATTCATTTGACTTATACAGCTTCCATTTTTCTATTTCTTTCTATTTTTTTATTTTTATTTTTATTTTTATTTATTTTTATTTTTTAAATTTTTTTTAAATTCTTAAATTTTTTTAATTTTACATGCTATTTTGAAATATACTTATTTTACTTATTCATTTATTTTAAACTTTACTTATTTTTTATTATCTCTTACAATATTTTTTTTTCTATAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTACACTCAAATGAGAAGACACCTTATAATGAGAAGAATGAGAAGGATTTTTAACCATTAGATCTAATGAAATTAAACGCGTGGAAAAACCTGTGTCATTAAGGATATTACAGAATGTGTTTGCTTCTGAAACATACGCACCAAATCAGGAATTTAGGTAATTTAAAAAGTAAAATAAATCAAATTACTGTCATCGTCGTCTTGCGTGAAAACAAAACCCAGGAATTGAGAAAATATCTTCCCTGTAAAACCAATTAATCAAATACTAAAACACCATAAATAAACAATAAGCAAACAAAATCTCATGAATTTAAGCGGGTAGTACTGCAACATAAAACACCAAAAACCAACCTTAGGTAAAATCGCAAAGTGATGATGAACTTGAAATTAAAAGGCCCAATTTGATTTCAGTTCCCACCCAACTTTTTCCTTACATGTCCATTTTCTCTCTCCTCTTTCACTGTTAAAATTCATCCCATTTTTGCTCAATTTTATTTTCTCTATGATCTCAATTCTCAAATACCAATTGCCCACAAATGAGCAAAATAAATTTGCTTATTTTTGATAAATGAGCAAAATAATTACAAGAGTGAGAAGGAGGGATGAAGAACATGGATCGATTAATATTTATTTGTCCATCACTAGAGTAAAAATAGAAGAAGGAAAATCAATTGTTTGAAGAACAAATTAAATTTATAAAAAAGTAAGATTAAATTTCAGTGAAAAAAGCATTAAATCCTCTGACCTTGAAATCGAAAATTAAATGAGCAAAACAAATTTGCTCATTTAGAGTAAATGAGCAAAACAAATTTGCTCATTTAGAGTAAATGAGCAAAATAAATTTGCTCATTTAGAGTAAATTTGTTCATCTAGAATAAATTAGAAAAAAAAATGCTCATTTGTGTAAATGAACAAAAAAATTTGCACAAATGAGCAAACAACAGTTCCATTGACGATGACATTGATGCACCCATTTTTGTTGTTTTTCGAACTTTACCCCAGTTTTTTGAAAAATAATCATTTTCATTTTAAAACACCATCAATCAACAAGAAGGGGAAAAAATATGGAATTTTGAAATAAGACAAAATAGTTAGCTACAACATCAAAATTAACGAAAATGAATAAAATGAATAATTACCAAAGAATAAATAGGTTGTAATTTGTAGGAAAATAAAGCAACAAAATCCATACCACCAGGACCTCCAAAAAACCGTCGATCTAATCCTAACTTCAAAAAGTCCTCACTGTATATTTTTGCTTGCGTATTCTTCTTCAAAAAAAATTGTAGCTCTAATTTTAGTGATTTGTTTGGTTGAATGCCTAAGAAATGAATATGAACAGGATTTAGTATGGAGAAATTGAAGAATTTGATAGGAGAAATAGAGGAGCTGGATGCCATTTTTGAGTTTTACTTTACCAATTCAATTGTCAGGGATGAGAATAGGAGAGAGAAAATAGGAAGAAATACCCTTTTAGATAAATCACGTGAATTGATTGTTGTTAACACACGCGCGAAATATGAGTCGTTAGATTGATTTATATGCACGGTCAAGATCCCTTCTCATTCTTCTCATTACAAGGATCTTCTCATTGGAGGGGGACCCTATATATATATATATATATATATATATATATATATATATATTTCTCTTATCTTACTTTCATTAATTCCACTTTCTCTTCCTTGTTTTTTCTTTTTTACTTCCTGCTCCTTTCTGGTTTGATTGGTGACAACGACAATCTCCTACGACGATTCATGTTAGCCGACCCCAAATCATTTTGGGACTAAGGTTTTGTTGTTGTTGTTGTAAGATCTCACAAGGTAAATAAAAAAGGAATGAAATGTTGTCATAAAGGGAATAAAGTAAAAGCGAGTAGAATTAGGAAAAACGAACGAAAACAGAAATTGGGTAGAATTCAGAAAAGTGGAGGTAGTAATTCCCTAGTCATCCTTTAAAAGAGCATGAATCCCAGCCATTATTTATGAGAGCACTGGAACTCTGGTATCCATGCTTATCTCTCTGACAAAGGGTTTTAATTTATGGTGAGTTACCTTTTTCTTATCAATTCTTTCTTGTTGAGTTGGTTGATCGAATGGTCAAACCTTTGAAATTGACACTGGTAAACTGTTTTATGAAATTTACCGAACTCTGATGATGGATGGATTTATTTAATTGTGGAAAGTGCCGACCTTGCAATTCAACCATGGATGGAGTATCAACTCATCTGTAGCTTACTTTATTTTATAACTGTTTGTCTACGAGTACCATGGGCACTTGTTAAACACTTCTTGAACAATTGATTTTCAACATGGGAATGGTTAACACCAAAGGAGAAGTTATTTAATTTCTACTTTATAAAATATATAGAAAGATTGGACTGTAATAAATGGGATTTATTCATGTTACTTTAAACTTTTTAATTACCCTAAGTACTCATTTAGGACTTTCTGCACTCTGACAAATATATGGCTTAACTGGCTGATACTTGACTTTTCTCCTTGACAGTTGACTCTTAATTATCTTATTCCGCAAATATGTAGAAAAAAACTATAAAGATTAAGGGAAAGTAAAGAGAAAGCCATGCGATAAAGAATTTGACCAGTATCAGCGAACATGCAACTGTAAAATGTGTATTTGTAACTGTAATGTGAAAAGACATGCAAAAGTTGTTTAGAATCAGGAGTTGTTCATGGATGCTGTAACTGTGTCTGAGTAACATAGGATTTGTTTGGGAAATTCGGATAACATTAGTACAATACATGATTTATTCCCCTATGACAGGAAGTTCTAACCCTTTTTAATAATAATTTCTGACTTCATTGTTGTGTTAAATTGGGTTCCTGGAGTTCTGCATGTATCTTCGAAGACTTATATTGTATCTAACCTCTATTGCCTATTGTAATTGCTTGCTGTTGGCTGCTTCTTGTTATATCTGCTTTCCTCGCCGCAATTCAGCCATTAGAGTTTTCACCGTTTTGTAGCCACATAGTCATTACATAATCATTTTCTGGTTTTTTAATTTAGCTCTACTTATTATTACCCTTTGATCTCTGCAGGTACCATACGTGCAGTTCAGAGAAAATAACTGGACTGTGAATGCTGATGCGAAGGGCAGGTGGAATATAAGATATGATTTGTGAGAAAGGATGATAGGTCATCATCATCTATATAACTTTTTTTGGAGGTTAGATTATCATATAGACACCGAGTAGCACGTTTTCATATGTTAATCTGATGGACAGCCATTTTGCTGACCATATTCATTGATGTGCTTATAATGCCTTACGATGATTCTACTTTTCTAAGTTAGTTATTTATTGAAATGCTGCCCATGTGAATGTGTTTGTCTCATCCCTATAAACTTTTGTGCTGTCAAAGGTCTCTTCTTTATCAAAATAGTGCAGTTGCTTAAATTCCTTTATAAACACTAAAGTTTAGTGCACTTGAGGTTGACCTGTACCAGGAAATGTGGGGCTTTCAGCAATAGTGTTTCACAAACTGGAACAGCAATTGCCCCATTACAGGACCTTTCGTTCCCATACCGTGTCACAAAAGGGTCTGCCCTACAGCCTAGCTCCCTCTCGTGGTCGGTCTCACCTGAAAATGATCCATTTTTGTTCGAATTCGTTAGTGTCCAAATTGGTGGGGTCTGAGCCTCGAGTGAATGCTGTTTTCAGTTAGATATTCGGAGATTGAAGTTTCAGATTTTGGTGTATAGACAACTATCTTTAGCAATCTATATTTTACTATAGCTTATAGTTACTTTTAAGCAGACATGAGAAAAGTGGTTCCTGACTTATAATAGCCGAATGAGTTGATACGGAAACCCCGGTTGCTGATAGTGGATGACTTGAGTTTATGCCTATCAGGTGGAGGTTACTAGGATAATTCCTTTATAGAAGAAGAGCTGCTTTTTGGGTAAGAATTGGAAGTTTTCAGGATAAGGTCTTTCTGATGTGAAAAGGGATAATTTGCTAGTTGTAGGATTCTTCTTTTTCTGAAAGCAGTTTTATGAGATAAGACTCTGATCCAAGCTCACGTGGTGCATATGATTATAATTCATGGTGGTTGGAGTTGGAGTTGGAGTTGGAGTTGGAGGGAGGGGGTGGGTGATCTTTTTGAAAACTTATTTGGTGCAAAACCTATGAAATTTTTAATAAATAAATATAGGTGGCAATTCATTAGAGTGGGAGCAACCCTAATAGGGGTTATTTTCGGAAGGGGGGAGTGGACGCTTAGAGATATAGGTGTACCTTATACTAACTATGTTCCTTAATGTTCTACCCACTTATTGTGGACTCGAAGTAAGAAAGTGATTGGAACTTTATGAAATGTTGGTGTACCTTATAATACTAACTTTGTTCCTTAATGTTCTAATCACTTACTCTGGACTCAAAATAAATAAAAGTGATCAAAACTTTATGAGAAATACCCCAATGCAGAAAGATAACTTTATGATAAATACCCCAATAAGGAAAGTGAACATAACATTAAAGAACGGAGAGGGTATGTACTATATACGTCCTCAGATAGACCCGGGGAATGATGAATTCATCTCGGAATTGGGATAGATTAAAAAAAATTAAAAAAAATCTTATCTAGAGGTCATTTTCGAAACCCTGGAAGTTAACCCTTTTGAGATTGGATTGATTTTGTAATCTTTGAGATGAGGTGATCACTTATCAAGTTGTAAACTTCTAATGTACCATGCCTCTACATAGAAGGATGATGATGATGATGATGATGATGATGATAAGGTCTATTTTATGAATTATCTTATAATTTAGATGGTGATGCTCTTATTAATATCTCACCCACTTTGTTTTCGAGTCAAAAGAGTTTGTAAGTTGTTGGTCTAAATTCAAGTTTACGTATGCCTTTTTAATTCCCAATATTAATATGTTTAAATTATTCCTTTGACGATTGTCACTATTATTAGATCATTATAACAAGATCTTAACCTAGACTAAACTATAAGTGGAATCCAACATCATTTTTTTTGAGCATGTTAATGTAGACTGGCCTTATATTCTCAGTATCGAATAGTAACATGTAGAAATGCTTTCGAAAAGATTAGATGCTGAAATGGGAATGAATTGTAATGTGTTTTATATATTGACTTGTTTTCACCTTTTCCGTTCTCTATCCTACTCCCGATTGCATCTTCTAGACGGGCATTTTTAGAGTTAGGCGGCAATGGACGACCATAGTTTGAATCACGGAGGTCATGAAGTGTAGCGATAATGGTGGAGGTTTAGTTGTGAGATGGGAGAGATCAAGGTTGTGGCGGGCGGACGGACGAAGGGTGGTTCGAGCAAGAAGAGAGATGAAAATTGAAAGGTAAAGAGAAGATAAGGGATTCATTTGTGGGATCCTAATCTAGTTAGGTAATGAAATGAAATGAAAGGAAAGGGGAAAGAGAATGTATTTTTTTTGGGAAAAATGAACTTTTGAGACATTATCTTAGGGCTTCACATGCCCAAT

mRNA sequence

CTCCCAAAAAAAACAAAAAGAAAAACCCTCATATCCGTTTCTCTCTCCTCTTCACCTTACCTTCTTCACTATTGTTGTGAGCGAAGTACGACGAGTGACGTCAGCAACCATGGAGACATCACTACGATATGGCGGTGATTCCAAATCTCTCAGAATGCATGCCAAGCAAAGGCTCCTCATTGACCCCGACACTTTCTTGCAGGTTCATGGAGAGTTAGATACAAGATACGGGTCACCAAACTATTTCTGTGCAATGTTGAGGCGCTTCTATAATCAACCACAGCTGGCTTCCAGTTTTGGCTTGGGAGTGCAATTTGATAAGCATGAGAAGCTTGGATACATTGTTCGTGGTAAAATGGCATTCCCTGTGACATCTAATGACTCGATTAGCTTTAACGTCAAGGGGCGATGCGAGATTGACAAAGAGTTTAAGCAGAAGCGGGCAAGGGGAGGCGCTGAATTCACCTGGAGCATCTTCAATTTTCAAAAGGAACAAGATATGAGGTTCAAGGTTGGGTATGAGATCAATGACAAGGTACCATACGTGCAGTTCAGAGAAAATAACTGGACTGTGAATGCTGATGCGAAGGGCAGGTGGAATATAAGATATGATTTGTGAGAAAGGATGATAGGTCATCATCATCTATATAACTTTTTTTGGAGACGGGCATTTTTAGAGTTAGGCGGCAATGGACGACCATAGTTTGAATCACGGAGGTCATGAAGTGTAGCGATAATGGTGGAGGTTTAGTTGTGAGATGGGAGAGATCAAGGTTGTGGCGGGCGGACGGACGAAGGGTGGTTCGAGCAAGAAGAGAGATGAAAATTGAAAGGTAAAGAGAAGATAAGGGATTCATTTGTGGGATCCTAATCTAGTTAGGTAATGAAATGAAATGAAAGGAAAGGGGAAAGAGAATGTATTTTTTTTGGGAAAAATGAACTTTTGAGACATTATCTTAGGGCTTCACATGCCCAAT

Coding sequence (CDS)

ATGGAGACATCACTACGATATGGCGGTGATTCCAAATCTCTCAGAATGCATGCCAAGCAAAGGCTCCTCATTGACCCCGACACTTTCTTGCAGGTTCATGGAGAGTTAGATACAAGATACGGGTCACCAAACTATTTCTGTGCAATGTTGAGGCGCTTCTATAATCAACCACAGCTGGCTTCCAGTTTTGGCTTGGGAGTGCAATTTGATAAGCATGAGAAGCTTGGATACATTGTTCGTGGTAAAATGGCATTCCCTGTGACATCTAATGACTCGATTAGCTTTAACGTCAAGGGGCGATGCGAGATTGACAAAGAGTTTAAGCAGAAGCGGGCAAGGGGAGGCGCTGAATTCACCTGGAGCATCTTCAATTTTCAAAAGGAACAAGATATGAGGTTCAAGGTTGGGTATGAGATCAATGACAAGGTACCATACGTGCAGTTCAGAGAAAATAACTGGACTGTGAATGCTGATGCGAAGGGCAGGTGGAATATAAGATATGATTTGTGA

Protein sequence

METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLASSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTWSIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo24634Spo24634gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo24634.1Spo24634.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24634.1.exon.1Spo24634.1.exon.1exon
Spo24634.1.exon.2Spo24634.1.exon.2exon
Spo24634.1.exon.3Spo24634.1.exon.3exon
Spo24634.1.exon.4Spo24634.1.exon.4exon
Spo24634.1.exon.5Spo24634.1.exon.5exon
Spo24634.1.exon.6Spo24634.1.exon.6exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24634.1.utr5p.1Spo24634.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24634.1.CDS.1Spo24634.1.CDS.1CDS
Spo24634.1.CDS.2Spo24634.1.CDS.2CDS
Spo24634.1.CDS.3Spo24634.1.CDS.3CDS
Spo24634.1.CDS.4Spo24634.1.CDS.4CDS
Spo24634.1.CDS.5Spo24634.1.CDS.5CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24634.1.utr3p.1Spo24634.1.utr3p.1three_prime_UTR
Spo24634.1.utr3p.2Spo24634.1.utr3p.2three_prime_UTR


Homology
[Close]
BLAST of Spo24634.1 vs. NCBI nr
Match: gi|902209493|gb|KNA16221.1| (hypothetical protein SOVF_091080 [Spinacia oleracea])

HSP 1 Score: 359.0 bits (920), Expect = 4.600e-96
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA
Sbjct: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW
Sbjct: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL
Sbjct: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 169
[Close]
BLAST of Spo24634.1 vs. NCBI nr
Match: gi|731314489|ref|XP_010686809.1| (PREDICTED: outer envelope pore protein 21B, chloroplastic-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 303.1 bits (775), Expect = 3.000e-79
Identity = 138/169 (81.66%), Postives = 155/169 (91.72%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRY  DSKSLR+HAKQ+L+ID DTFLQVHGELDT+YGSPNYFCAMLRRF+NQPQLA
Sbjct: 1   METSLRYSKDSKSLRLHAKQKLIIDSDTFLQVHGELDTKYGSPNYFCAMLRRFHNQPQLA 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           SS GLGVQ+DKHEKLGY  RGKMAFPVTS+DSISF VKGR + DKEFKQ+R+ GGAEF+W
Sbjct: 61  SSLGLGVQYDKHEKLGYTARGKMAFPVTSDDSISFKVKGRYDADKEFKQRRSMGGAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQKEQD+R KVGY++ +KVPY+Q RENNWTVNAD KG+WNIRYDL
Sbjct: 121 SIFNFQKEQDLRVKVGYDVIEKVPYMQLRENNWTVNADVKGKWNIRYDL 169
[Close]
BLAST of Spo24634.1 vs. NCBI nr
Match: gi|568839919|ref|XP_006473923.1| (PREDICTED: outer envelope pore protein 21, chloroplastic [Citrus sinensis])

HSP 1 Score: 268.1 bits (684), Expect = 1.100e-68
Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYG DSK+LR++AK+++ ID +T LQVHGELDTR G+P+Y  AM+R FY  P L+
Sbjct: 1   METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFY--PDLS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +SFGLGVQ+DKHEKL Y VRGK  FPVTS   +SFN+KGRCE+DKEFKQ+++RG AEF+W
Sbjct: 61  ASFGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQK+QD+RFK+GYE+ DKVPY+Q RENNWTVNADA GRWN+RYDL
Sbjct: 121 SIFNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. NCBI nr
Match: gi|567885717|ref|XP_006435417.1| (hypothetical protein CICLE_v10002700mg [Citrus clementina])

HSP 1 Score: 266.5 bits (680), Expect = 3.100e-68
Identity = 120/169 (71.01%), Postives = 146/169 (86.39%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYG DSK+LR++AK+++ ID +T LQVHGELDTR G+P+Y  AM+R FY  P L+
Sbjct: 1   METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFY--PDLS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +SFGLGVQ+DKHEKL Y VRGK  FPVTS   +SFN+KGRCE+DKEFKQ+++RG AEF+W
Sbjct: 61  ASFGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQK+QD+RFK+GYE+ DK PY+Q RENNWTVNADA GRWN+RYDL
Sbjct: 121 SIFNFQKDQDVRFKLGYEVVDKAPYMQIRENNWTVNADANGRWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. NCBI nr
Match: gi|702368702|ref|XP_010061212.1| (PREDICTED: outer envelope pore protein 21, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 247.7 bits (631), Expect = 1.500e-62
Identity = 109/169 (64.50%), Postives = 143/169 (84.62%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRY GD+K+LR+HAK+++ ID  TFLQ+HGELDTR G+P++F AM+R FY  P ++
Sbjct: 1   METSLRYWGDAKALRIHAKEKIFIDSKTFLQLHGELDTRLGAPSHFSAMIRHFY--PDIS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +S G+GVQ+DK+ +L Y VR K AFPVT+N  +SFNVKGRC++DKEFKQ ++RGGAEF+W
Sbjct: 61  ASLGVGVQYDKNGRLRYNVRAKKAFPVTTNRLLSFNVKGRCDVDKEFKQWKSRGGAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           S+ NFQK+QD+R K+G+E+ D+VPY+Q RENNWT NAD  GRWN+RYDL
Sbjct: 121 SLLNFQKDQDVRLKLGFEMFDQVPYLQVRENNWTFNADTNGRWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9N6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_091080 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.200e-96
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA
Sbjct: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW
Sbjct: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL
Sbjct: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 169
[Close]
BLAST of Spo24634.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D082_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g014190 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.100e-79
Identity = 138/169 (81.66%), Postives = 155/169 (91.72%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRY  DSKSLR+HAKQ+L+ID DTFLQVHGELDT+YGSPNYFCAMLRRF+NQPQLA
Sbjct: 1   METSLRYSKDSKSLRLHAKQKLIIDSDTFLQVHGELDTKYGSPNYFCAMLRRFHNQPQLA 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           SS GLGVQ+DKHEKLGY  RGKMAFPVTS+DSISF VKGR + DKEFKQ+R+ GGAEF+W
Sbjct: 61  SSLGLGVQYDKHEKLGYTARGKMAFPVTSDDSISFKVKGRYDADKEFKQRRSMGGAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQKEQD+R KVGY++ +KVPY+Q RENNWTVNAD KG+WNIRYDL
Sbjct: 121 SIFNFQKEQDLRVKVGYDVIEKVPYMQLRENNWTVNADVKGKWNIRYDL 169
[Close]
BLAST of Spo24634.1 vs. UniProtKB/TrEMBL
Match: A0A067HBU4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031023mg PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.400e-69
Identity = 121/169 (71.60%), Postives = 147/169 (86.98%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYG DSK+LR++AK+++ ID +T LQVHGELDTR G+P+Y  AM+R FY  P L+
Sbjct: 1   METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFY--PDLS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +SFGLGVQ+DKHEKL Y VRGK  FPVTS   +SFN+KGRCE+DKEFKQ+++RG AEF+W
Sbjct: 61  ASFGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQK+QD+RFK+GYE+ DKVPY+Q RENNWTVNADA GRWN+RYDL
Sbjct: 121 SIFNFQKDQDVRFKLGYEVVDKVPYMQIRENNWTVNADANGRWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. UniProtKB/TrEMBL
Match: V4T661_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002700mg PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.100e-68
Identity = 120/169 (71.01%), Postives = 146/169 (86.39%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYG DSK+LR++AK+++ ID +T LQVHGELDTR G+P+Y  AM+R FY  P L+
Sbjct: 1   METSLRYGKDSKALRIYAKEKIPIDSNTRLQVHGELDTRVGAPSYVSAMIRHFY--PDLS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +SFGLGVQ+DKHEKL Y VRGK  FPVTS   +SFN+KGRCE+DKEFKQ+++RG AEF+W
Sbjct: 61  ASFGLGVQYDKHEKLRYTVRGKKVFPVTSTGLLSFNIKGRCEVDKEFKQRKSRGAAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           SIFNFQK+QD+RFK+GYE+ DK PY+Q RENNWTVNADA GRWN+RYDL
Sbjct: 121 SIFNFQKDQDVRFKLGYEVVDKAPYMQIRENNWTVNADANGRWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. UniProtKB/TrEMBL
Match: A0A059BPK7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01803 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.000e-62
Identity = 109/169 (64.50%), Postives = 143/169 (84.62%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRY GD+K+LR+HAK+++ ID  TFLQ+HGELDTR G+P++F AM+R FY  P ++
Sbjct: 1   METSLRYWGDAKALRIHAKEKIFIDSKTFLQLHGELDTRLGAPSHFSAMIRHFY--PDIS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +S G+GVQ+DK+ +L Y VR K AFPVT+N  +SFNVKGRC++DKEFKQ ++RGGAEF+W
Sbjct: 61  ASLGVGVQYDKNGRLRYNVRAKKAFPVTTNRLLSFNVKGRCDVDKEFKQWKSRGGAEFSW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           S+ NFQK+QD+R K+G+E+ D+VPY+Q RENNWT NAD  GRWN+RYDL
Sbjct: 121 SLLNFQKDQDVRLKLGFEMFDQVPYLQVRENNWTFNADTNGRWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. ExPASy Swiss-Prot
Match: OP21B_ARATH (Outer envelope pore protein 21B, chloroplastic OS=Arabidopsis thaliana GN=OEP21B PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.000e-56
Identity = 91/169 (53.85%), Postives = 135/169 (79.88%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METS+RY  +SKS+++HAK+++ ++  T LQ+HGELDT  G+P+YFCAM+R F+  P+ +
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFF--PEAS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +  G+G+ +DK +KL  +VRGK  FPV ++  ++FN+KGRC+ID++  QK  +G AEF W
Sbjct: 61  TGLGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           +I +F+++QD+R KVGYE+ DKVPY+Q RENNWT+NA+ KG+WN+RYDL
Sbjct: 121 NIMDFKEDQDVRIKVGYEMFDKVPYMQIRENNWTLNANMKGKWNLRYDL 167
[Close]
BLAST of Spo24634.1 vs. ExPASy Swiss-Prot
Match: OEP21_PEA (Outer envelope pore protein 21, chloroplastic OS=Pisum sativum GN=OEP21 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.100e-55
Identity = 95/179 (53.07%), Postives = 136/179 (75.98%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRYGGDSK+L++HAK++L ID +TF QV G LDT+ G P+   A++R FY  P  +
Sbjct: 1   METSLRYGGDSKALKIHAKEKLRIDTNTFFQVRGGLDTKTGQPSSGSALIRHFY--PNFS 60

Query: 61  SSFGLGVQFDK----------HEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQK 120
           ++ G+GV++DK          ++KL Y V  K  FPVT++  ++F +KG C++D++FK+ 
Sbjct: 61  ATLGVGVRYDKQDSVGVRYAKNDKLRYTVLAKKTFPVTNDGLVNFKIKGGCDVDQDFKEW 120

Query: 121 RARGGAEFTWSIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           ++RGGAEF+W++FNFQK+QD+R ++GYE  ++VPY+Q RENNWT NAD KGRWN+RYDL
Sbjct: 121 KSRGGAEFSWNVFNFQKDQDVRLRIGYEAFEQVPYLQIRENNWTFNADYKGRWNVRYDL 177
[Close]
BLAST of Spo24634.1 vs. ExPASy Swiss-Prot
Match: OP21A_ARATH (Outer envelope pore protein 21A, chloroplastic OS=Arabidopsis thaliana GN=OEP21A PE=2 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.300e-54
Identity = 89/169 (52.66%), Postives = 133/169 (78.70%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRY  +S+SL++HAK++  ++  T LQ+HGELDT  G P+YFCAM+R F+++   +
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEA--S 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           ++ G+G+ +DK EKL  +VRGK  FPV +++ ++FN+KGRC+ D++  Q+ A+G AEF W
Sbjct: 61  TNLGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           +I+ FQK+QD+R ++GYE+ +KVPY+Q RENNWT N + KG+WN+RYDL
Sbjct: 121 NIWKFQKDQDLRLRIGYEMFEKVPYMQIRENNWTFNTNLKGKWNVRYDL 167
[Close]
BLAST of Spo24634.1 vs. ExPASy Swiss-Prot
Match: OEP21_ORYSI (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. indica GN=OEP21 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.500e-30
Identity = 74/187 (39.57%), Postives = 104/187 (55.61%), Query Frame = 1 

		  

Query: 1   METSLRYGG-----DSKS---LRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRR 60
           METSLR  G      SKS   LR+HAK++L I  +  LQ HGE+    G+P Y   + R 
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60

Query: 61  FYNQPQLASSFGLG--VQFDKHEKL-------GYIVRGKMAF-PVTSNDSISFNVKGRCE 120
           FY  P+L+++ GLG  + F  ++ L        Y +R   A  P  SN  +  N+KGR  
Sbjct: 61  FY--PRLSANLGLGLAIHFRNNQPLPLAWDNFSYTLRASKAIIPFPSNALLGINLKGRLL 120

Query: 121 IDKEFKQKRARGGAEFTWSIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGR 170
            DK F         E  W+I + ++ QD+R K+GY++  K+PY Q RENNWT NA   G+
Sbjct: 121 ADKYFNPTTRTAAVELAWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENNWTFNAYMDGK 180
[Close]
BLAST of Spo24634.1 vs. ExPASy Swiss-Prot
Match: OEP21_ORYSJ (Outer envelope pore protein 21, chloroplastic OS=Oryza sativa subsp. japonica GN=OEP21 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.500e-30
Identity = 74/187 (39.57%), Postives = 104/187 (55.61%), Query Frame = 1 

		  

Query: 1   METSLRYGG-----DSKS---LRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRR 60
           METSLR  G      SKS   LR+HAK++L I  +  LQ HGE+    G+P Y   + R 
Sbjct: 1   METSLRLRGGGSRPQSKSQEGLRIHAKEKLPIASNALLQAHGEIHAATGAPTYLALLFRN 60

Query: 61  FYNQPQLASSFGLG--VQFDKHEKL-------GYIVRGKMAF-PVTSNDSISFNVKGRCE 120
           FY  P+L+++ GLG  + F  ++ L        Y +R   A  P  SN  +  N+KGR  
Sbjct: 61  FY--PRLSANLGLGLAIHFRNNQPLPLAWDNFSYTLRASKAIIPFPSNALLGINLKGRLL 120

Query: 121 IDKEFKQKRARGGAEFTWSIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGR 170
            DK F         E  W+I + ++ QD+R K+GY++  K+PY Q RENNWT NA   G+
Sbjct: 121 ADKYFNPTARTAAVELAWTILDLKRGQDVRLKLGYQLLHKMPYFQLRENNWTFNAYMDGK 180
[Close]
BLAST of Spo24634.1 vs. TAIR (Arabidopsis)
Match: AT1G76405.2 (unknown protein)

HSP 1 Score: 218.4 bits (555), Expect = 3.400e-57
Identity = 91/169 (53.85%), Postives = 135/169 (79.88%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METS+RY  +SKS+++HAK+++ ++  T LQ+HGELDT  G+P+YFCAM+R F+  P+ +
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFF--PEAS 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           +  G+G+ +DK +KL  +VRGK  FPV ++  ++FN+KGRC+ID++  QK  +G AEF W
Sbjct: 61  TGLGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           +I +F+++QD+R KVGYE+ DKVPY+Q RENNWT+NA+ KG+WN+RYDL
Sbjct: 121 NIMDFKEDQDVRIKVGYEMFDKVPYMQIRENNWTLNANMKGKWNLRYDL 167
[Close]
BLAST of Spo24634.1 vs. TAIR (Arabidopsis)
Match: AT1G20816.1 (unknown protein)

HSP 1 Score: 212.2 bits (539), Expect = 2.400e-55
Identity = 89/169 (52.66%), Postives = 133/169 (78.70%), Query Frame = 1 

		  

Query: 1   METSLRYGGDSKSLRMHAKQRLLIDPDTFLQVHGELDTRYGSPNYFCAMLRRFYNQPQLA 60
           METSLRY  +S+SL++HAK++  ++  T LQ+HGELDT  G P+YFCAM+R F+++   +
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEA--S 60

Query: 61  SSFGLGVQFDKHEKLGYIVRGKMAFPVTSNDSISFNVKGRCEIDKEFKQKRARGGAEFTW 120
           ++ G+G+ +DK EKL  +VRGK  FPV +++ ++FN+KGRC+ D++  Q+ A+G AEF W
Sbjct: 61  TNLGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDW 120

Query: 121 SIFNFQKEQDMRFKVGYEINDKVPYVQFRENNWTVNADAKGRWNIRYDL 170
           +I+ FQK+QD+R ++GYE+ +KVPY+Q RENNWT N + KG+WN+RYDL
Sbjct: 121 NIWKFQKDQDLRLRIGYEMFEKVPYMQIRENNWTFNTNLKGKWNVRYDL 167
The following BLAST results are available for this feature:
BLAST of Spo24634.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902209493|gb|KNA16221.1|4.6e-96100.hypothetical protein SOVF_0910... [more]
gi|731314489|ref|XP_010686809.1|3.0e-7981.6PREDICTED: outer envelope pore... [more]
gi|568839919|ref|XP_006473923.1|1.1e-6871.6PREDICTED: outer envelope pore... [more]
gi|567885717|ref|XP_006435417.1|3.1e-6871.0hypothetical protein CICLE_v10... [more]
gi|702368702|ref|XP_010061212.1|1.5e-6264.5PREDICTED: outer envelope pore... [more]
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BLAST of Spo24634.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R9N6_SPIOL3.2e-96100.Uncharacterized protein OS=Spi... [more]
A0A0J8D082_BETVU2.1e-7981.6Uncharacterized protein OS=Bet... [more]
A0A067HBU4_CITSI7.4e-6971.6Uncharacterized protein OS=Cit... [more]
V4T661_9ROSI2.1e-6871.0Uncharacterized protein OS=Cit... [more]
A0A059BPK7_EUCGR1.0e-6264.5Uncharacterized protein OS=Euc... [more]
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BLAST of Spo24634.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
OP21B_ARATH6.0e-5653.8Outer envelope pore protein 21... [more]
OEP21_PEA5.1e-5553.0Outer envelope pore protein 21... [more]
OP21A_ARATH4.3e-5452.6Outer envelope pore protein 21... [more]
OEP21_ORYSI1.5e-3039.5Outer envelope pore protein 21... [more]
OEP21_ORYSJ1.5e-3039.5Outer envelope pore protein 21... [more]
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BLAST of Spo24634.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G76405.23.4e-5753.8unknown protein[more]
AT1G20816.12.4e-5552.6unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35993FAMILY NOT NAMEDcoord: 2..169
score: 2.3