Spo24673.1 (mRNA)

Overview
NameSpo24673.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionRmlC-like cupins superfamily protein
Locationchr4 : 18001891 .. 18002980 (+)
Sequence length872
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCATATCTCTTTAATTTTTTTCACACATGATTATTTTTTTTCTTTCTCACTTATCCCACTTTAATGTTTTCAATTATTTTCCTTTTTCTTCTTGTCCCCCTTCTTTCTCAACTCTCTCCTATGTCATTATAAATACACCAAAGGCAAACATATCTACCCTTCTTTATATCTTCCTCCTCTTTTCATCTCCTCCTTTGAAAACAGAAAATTAATTTTTTTTCAATTAAAAAAACAGAATGGGAACAACATCAGAATCAAATATCAAGATCATAGTTGAGAAAAATCCTTCAGAAGCTCGTTTATCAGAACTTGGCATTAAATCTTGGCCTAAGTATGTATCATTCTCTTTAATTACTTTTTGAGAACTAAATTATCATAGATTATGTAAATATAATCTTGTTTTTATATGCTAATCTATTCTAACCATAAATACAAGATTATATTTACATAATCCTTCACTAAAATTATTTGATTTTGTTTTTCTACTCTGTACGAGTACAGAGTTAATTAATAATAGTCACGCTGATAGTGTAATTTGAATTTGTGCAGATGGGGTTGTCCACCAGGGAAAATGACACTGAAATATGATGCAACAGAAACATGTTACTTTGTGAGAGGGAAAGTTAAGGCATACCCTAAAAATAAAGGGTCAACAAATGATGAAGGTGTTGTAGAGTTTGGGGCAGGAGATGTTGTCATTTTTCCAAAGGGACTTAGTTGCATCTGGGATGTTTCTGTTGCTGTTGATAAATTCTACAAGTTTGATCCTCCTTAATTCATACTTTTAATTAGCATAGTAATTAATTAACATAATTAATCTTTTTTTATGTTGCGTTGTGTTCAGAAAGTATTTTTACTTGGTTAATTATTACGTACTCTCTCCGTTTCTAAATATTTGTCGTTGTAGGGACGGAGTAGATCTTAAGTTAAGTTTATGTATGTGTTCCAAGAATCTTGGAAATATTATTACAAAAGTAATTAGTCAAAGTTTTTTTTTCCCACTTAATTATTGTTTTAAATTTTTCAGTTTGTATAAGTTGTGAAATCAAGACAATTTGAATGGAGTAGCATTTATATGGAGTTTGAAT

mRNA sequence

TTTCATATCTCTTTAATTTTTTTCACACATGATTATTTTTTTTCTTTCTCACTTATCCCACTTTAATGTTTTCAATTATTTTCCTTTTTCTTCTTGTCCCCCTTCTTTCTCAACTCTCTCCTATGTCATTATAAATACACCAAAGGCAAACATATCTACCCTTCTTTATATCTTCCTCCTCTTTTCATCTCCTCCTTTGAAAACAGAAAATTAATTTTTTTTCAATTAAAAAAACAGAATGGGAACAACATCAGAATCAAATATCAAGATCATAGTTGAGAAAAATCCTTCAGAAGCTCGTTTATCAGAACTTGGCATTAAATCTTGGCCTAAATGGGGTTGTCCACCAGGGAAAATGACACTGAAATATGATGCAACAGAAACATGTTACTTTGTGAGAGGGAAAGTTAAGGCATACCCTAAAAATAAAGGGTCAACAAATGATGAAGGTGTTGTAGAGTTTGGGGCAGGAGATGTTGTCATTTTTCCAAAGGGACTTAGTTGCATCTGGGATGTTTCTGTTGCTGTTGATAAATTCTACAAGTTTGATCCTCCTTAATTCATACTTTTAATTAGCATAGTAATTAATTAACATAATTAATCTTTTTTTATGTTGCGTTGTGTTCAGAAAGTATTTTTACTTGGTTAATTATTACGTACTCTCTCCGTTTCTAAATATTTGTCGTTGTAGGGACGGAGTAGATCTTAAGTTAAGTTTATGTATGTGTTCCAAGAATCTTGGAAATATTATTACAAAAGTAATTAGTCAAAGTTTTTTTTTCCCACTTAATTATTGTTTTAAATTTTTCAGTTTGTATAAGTTGTGAAATCAAGACAATTTGAATGGAGTAGCATTTATATGGAGTTTGAAT

Coding sequence (CDS)

ATGGGAACAACATCAGAATCAAATATCAAGATCATAGTTGAGAAAAATCCTTCAGAAGCTCGTTTATCAGAACTTGGCATTAAATCTTGGCCTAAATGGGGTTGTCCACCAGGGAAAATGACACTGAAATATGATGCAACAGAAACATGTTACTTTGTGAGAGGGAAAGTTAAGGCATACCCTAAAAATAAAGGGTCAACAAATGATGAAGGTGTTGTAGAGTTTGGGGCAGGAGATGTTGTCATTTTTCCAAAGGGACTTAGTTGCATCTGGGATGTTTCTGTTGCTGTTGATAAATTCTACAAGTTTGATCCTCCTTAA

Protein sequence

MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo24673Spo24673gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo24673.1Spo24673.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24673.1.exon.1Spo24673.1.exon.1exon
Spo24673.1.exon.2Spo24673.1.exon.2exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24673.1.utr5p.1Spo24673.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24673.1.CDS.1Spo24673.1.CDS.1CDS
Spo24673.1.CDS.2Spo24673.1.CDS.2CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24673.1.utr3p.1Spo24673.1.utr3p.1three_prime_UTR


Homology
BLAST of Spo24673.1 vs. NCBI nr
Match: gi|902159051|gb|KNA06294.1| (hypothetical protein SOVF_182440 [Spinacia oleracea])

HSP 1 Score: 229.2 bits (583), Expect = 3.400e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1

		  

Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY
Sbjct: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
           PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP
Sbjct: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 106

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|731326891|ref|XP_010674248.1| (PREDICTED: uncharacterized protein LOC104890448 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 199.5 bits (506), Expect = 2.900e-48
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1

		  

Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTS SNIKIIVEKNPSEARLSELGIKSWPKWGCPPGK+TLKYDATETCYFVRG+VKAY
Sbjct: 1   MGTTSGSNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKITLKYDATETCYFVRGRVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             +KGST+D+  VEFGAGDVVIFPKGLSCIWDVSVAVDK+YKFDPP
Sbjct: 61  --SKGSTSDD-AVEFGAGDVVIFPKGLSCIWDVSVAVDKYYKFDPP 103

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|703120844|ref|XP_010102191.1| (hypothetical protein L484_024472 [Morus notabilis])

HSP 1 Score: 162.5 bits (410), Expect = 3.900e-37
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPK-N 64
           S  N+KIIVE NPS +RLSELGI SWPKWGCPPGK  LK+DA+ETCY ++GKVK YPK +
Sbjct: 10  SSPNLKIIVESNPSSSRLSELGINSWPKWGCPPGKFILKFDASETCYLLKGKVKVYPKGS 69

Query: 65  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             S++D   VEFGAGD+VI PKGLSC WD+ VAVDK+YKFD P
Sbjct: 70  SSSSSDHEFVEFGAGDLVIIPKGLSCTWDILVAVDKYYKFDSP 112

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|225437941|ref|XP_002268868.1| (PREDICTED: uncharacterized protein LOC100241271 [Vitis vinifera])

HSP 1 Score: 162.2 bits (409), Expect = 5.100e-37
Identity = 74/101 (73.27%), Postives = 85/101 (84.16%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           ++SN +IIVEKNPSE+RLSELGIKSWPKWGC PGK  LK+DA ETCY ++GKVKAYPK  
Sbjct: 3   ADSNQRIIVEKNPSESRLSELGIKSWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGY 62

Query: 65  GSTNDEG-VVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
            +  DEG  VEFGAGD+VI P+GLSC WDVSVAVDK YKF+
Sbjct: 63  SANEDEGCCVEFGAGDLVILPRGLSCTWDVSVAVDKHYKFE 103

BLAST of Spo24673.1 vs. NCBI nr
Match: gi|694410266|ref|XP_009379734.1| (PREDICTED: uncharacterized protein LOC103968120 [Pyrus x bretschneideri])

HSP 1 Score: 161.4 bits (407), Expect = 8.700e-37
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1

		  

Query: 7   SNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPK---N 66
           SN++I+VE NPS++RLSELGI SWPKWGCPPGK TLK+DA ETCY V+GKVK YP+   +
Sbjct: 15  SNLRIVVESNPSDSRLSELGINSWPKWGCPPGKYTLKFDAAETCYLVKGKVKVYPRKGSS 74

Query: 67  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
             S++DE  V FGAGD+V  PKGLSCIWDVSVA+DK YKFD
Sbjct: 75  SSSSSDEEFVNFGAGDLVTIPKGLSCIWDVSVAIDKHYKFD 115

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG82_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182440 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.400e-57
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1

		  

Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY
Sbjct: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
           PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP
Sbjct: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 106

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPD7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077310 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.000e-48
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 1

		  

Query: 1   MGTTSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAY 60
           MGTTS SNIKIIVEKNPSEARLSELGIKSWPKWGCPPGK+TLKYDATETCYFVRG+VKAY
Sbjct: 1   MGTTSGSNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKITLKYDATETCYFVRGRVKAY 60

Query: 61  PKNKGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             +KGST+D+  VEFGAGDVVIFPKGLSCIWDVSVAVDK+YKFDPP
Sbjct: 61  --SKGSTSDD-AVEFGAGDVVIFPKGLSCIWDVSVAVDKYYKFDPP 103

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: W9RQL7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024472 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.700e-37
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPK-N 64
           S  N+KIIVE NPS +RLSELGI SWPKWGCPPGK  LK+DA+ETCY ++GKVK YPK +
Sbjct: 10  SSPNLKIIVESNPSSSRLSELGINSWPKWGCPPGKFILKFDASETCYLLKGKVKVYPKGS 69

Query: 65  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
             S++D   VEFGAGD+VI PKGLSC WD+ VAVDK+YKFD P
Sbjct: 70  SSSSSDHEFVEFGAGDLVIIPKGLSCTWDILVAVDKYYKFDSP 112

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: D7U396_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g04620 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.600e-37
Identity = 74/101 (73.27%), Postives = 85/101 (84.16%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           ++SN +IIVEKNPSE+RLSELGIKSWPKWGC PGK  LK+DA ETCY ++GKVKAYPK  
Sbjct: 3   ADSNQRIIVEKNPSESRLSELGIKSWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGY 62

Query: 65  GSTNDEG-VVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
            +  DEG  VEFGAGD+VI P+GLSC WDVSVAVDK YKF+
Sbjct: 63  SANEDEGCCVEFGAGDLVILPRGLSCTWDVSVAVDKHYKFE 103

BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Match: A0A068U5Q3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00016297001 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.700e-36
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           S SN++IIV+KNPSE++LSELGIKSWPKWGC PGK  LK+DA +TCY +RG+VK YPKN 
Sbjct: 9   SSSNLRIIVQKNPSESQLSELGIKSWPKWGCSPGKYQLKFDARQTCYLLRGRVKVYPKNS 68

Query: 65  GSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
                  VVEFGAGD+VI PKGLSC WDVSVAVDK YKFD
Sbjct: 69  SE-----VVEFGAGDLVIIPKGLSCTWDVSVAVDKHYKFD 103

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G28703.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 9.600e-34
Identity = 65/103 (63.11%), Postives = 77/103 (74.76%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           ++ N +IIVE+NPS+ARL EL  KSWPKWGC PGK  LKY+A E CY +RGKVK YPK  
Sbjct: 2   ADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKPP 61

Query: 65  GSTND----EGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKF 104
            S++     E  VEFGAGD+V FPKGLSC WDVS++VDK Y F
Sbjct: 62  PSSSSDAEVEWCVEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT3G04300.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 2.400e-32
Identity = 60/98 (61.22%), Postives = 72/98 (73.47%), Query Frame = 1

		  

Query: 9   IKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNKGSTN 68
           + I++E NPS  RLS+LG+ SWPKW C PGK  L ++  ETCY V+GKVK YP  KGS+ 
Sbjct: 1   MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYP--KGSSE 60

Query: 69  DEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFDPP 107
               VEFGAGD+V  PKGLSC WDVS+ +DK YKFDPP
Sbjct: 61  ---FVEFGAGDLVTIPKGLSCTWDVSLFIDKHYKFDPP 93

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G10300.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 4.500e-31
Identity = 58/100 (58.00%), Postives = 73/100 (73.00%), Query Frame = 1

		  

Query: 5   SESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNK 64
           S   + I +EKNP E++L++LG++SWPKWGCPP K    Y A ETCY ++GKVK YP   
Sbjct: 40  STEKLGITIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNG- 99

Query: 65  GSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
              +DEG VE  AGD V+FPKG+SC WDVSVAVDK Y+F+
Sbjct: 100 ---SDEG-VEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G10280.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.100e-16
Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 1

		  

Query: 4   TSESNIKIIVEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKN 63
           T    +KI+  +  S+ +L++LG+ SWPKW   P K   ++  TET YF+ GKVK     
Sbjct: 43  TEIHGVKIL--RQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKVKV--NV 102

Query: 64  KGSTNDEGVVEFGAGDVVIFPKGLSCIWDVSVAVDKFYKFD 105
            G   +E   E G GDVV+FPK +  +W+++ AV K Y  +
Sbjct: 103 DGYDEEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQYSLE 139

BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Match: AT4G10290.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 1.600e-12
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 1

		  

Query: 13  VEKNPSEARLSELGIKSWPKWGCPPGKMTLKYDATETCYFVRGKVKAYPKNKGSTNDEGV 72
           V +  S+A+L+ELG+ SW  W   P K   K+  TET YFV GK+K   K +    +   
Sbjct: 22  VMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFVEGKLKV--KVEDHHKEGEA 81

Query: 73  VEFGAGDVVIFPKGLSCIWDVSVAVDKFY 102
           +EF AGD+V+FP+ ++   DV   V K Y
Sbjct: 82  LEFVAGDLVVFPQDMNVFVDVIEDVKKRY 108

The following BLAST results are available for this feature:
BLAST of Spo24673.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902159051|gb|KNA06294.1|3.4e-57100.hypothetical protein SOVF_1824... [more]
gi|731326891|ref|XP_010674248.1|2.9e-4889.6PREDICTED: uncharacterized pro... [more]
gi|703120844|ref|XP_010102191.1|3.9e-3769.9hypothetical protein L484_0244... [more]
gi|225437941|ref|XP_002268868.1|5.1e-3773.2PREDICTED: uncharacterized pro... [more]
gi|694410266|ref|XP_009379734.1|8.7e-3770.3PREDICTED: uncharacterized pro... [more]
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BLAST of Spo24673.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QG82_SPIOL2.4e-57100.Uncharacterized protein OS=Spi... [more]
A0A0J8CPD7_BETVU2.0e-4889.6Uncharacterized protein OS=Bet... [more]
W9RQL7_9ROSA2.7e-3769.9Uncharacterized protein OS=Mor... [more]
D7U396_VITVI3.6e-3773.2Putative uncharacterized prote... [more]
A0A068U5Q3_COFCA6.7e-3672.0Uncharacterized protein OS=Cof... [more]
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BLAST of Spo24673.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24673.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G28703.19.6e-3463.1RmlC-like cupins superfamily p... [more]
AT3G04300.12.4e-3261.2RmlC-like cupins superfamily p... [more]
AT4G10300.14.5e-3158.0RmlC-like cupins superfamily p... [more]
AT4G10280.11.1e-1638.6RmlC-like cupins superfamily p... [more]
AT4G10290.11.6e-1240.4RmlC-like cupins superfamily p... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008579Domain of unknown function DUF861, cupin-3PFAMPF05899Cupin_3coord: 23..101
score: 2.1
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 20..101
score: 2.37
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 4..103
score: 2.0
NoneNo IPR availablePANTHERPTHR33271FAMILY NOT NAMEDcoord: 6..106
score: 3.4
NoneNo IPR availablePANTHERPTHR33271:SF3CUPIN DOMAIN-CONTAINING PROTEINcoord: 6..106
score: 3.4