Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCAAAAGTATTTTCATCAGTTGTCCTCCTCCTATGTCTCAACATAGTGTTTTTCACTATGGTGAGTTCCCAACATGTCCGCTCCCCACCACTTCGTCCTAGGTCACCACCGCCTTCCAGGTCACCACCTCCAATGGCGTCCCCACCCATGTCACCTCCTAGCAACAGTTGCCCCATAGATACGCTAAAATTAAAGGTGTGTGCCAATGTATTGAATGATTTGCTTAATGTCACGAATGGCACCCCGCAATGTTGTTCTCTCATTGAAGGGTTGGTTGACCTTGAAGCAGCAATTTGTCTTTGTACTGTCATTAAAGCTAATGTTTTAGGGATCAAAGCTAATGCTACGCTCAACATAACTGTGTTGCTCAACAATTGTGGTAAGAAGATACCTGAAGGCTTCGAATGTTCTTAA ATGTCTTCAAAAGTATTTTCATCAGTTGTCCTCCTCCTATGTCTCAACATAGTGTTTTTCACTATGGTGAGTTCCCAACATGTCCGCTCCCCACCACTTCGTCCTAGGTCACCACCGCCTTCCAGGTCACCACCTCCAATGGCGTCCCCACCCATGTCACCTCCTAGCAACAGTTGCCCCATAGATACGCTAAAATTAAAGGTGTGTGCCAATGTATTGAATGATTTGCTTAATGTCACGAATGGCACCCCGCAATGTTGTTCTCTCATTGAAGGGTTGGTTGACCTTGAAGCAGCAATTTGTCTTTGTACTGTCATTAAAGCTAATGTTTTAGGGATCAAAGCTAATGCTACGCTCAACATAACTGTGTTGCTCAACAATTGTGGTAAGAAGATACCTGAAGGCTTCGAATGTTCTTAA ATGTCTTCAAAAGTATTTTCATCAGTTGTCCTCCTCCTATGTCTCAACATAGTGTTTTTCACTATGGTGAGTTCCCAACATGTCCGCTCCCCACCACTTCGTCCTAGGTCACCACCGCCTTCCAGGTCACCACCTCCAATGGCGTCCCCACCCATGTCACCTCCTAGCAACAGTTGCCCCATAGATACGCTAAAATTAAAGGTGTGTGCCAATGTATTGAATGATTTGCTTAATGTCACGAATGGCACCCCGCAATGTTGTTCTCTCATTGAAGGGTTGGTTGACCTTGAAGCAGCAATTTGTCTTTGTACTGTCATTAAAGCTAATGTTTTAGGGATCAAAGCTAATGCTACGCTCAACATAACTGTGTTGCTCAACAATTGTGGTAAGAAGATACCTGAAGGCTTCGAATGTTCTTAA MSSKVFSSVVLLLCLNIVFFTMVSSQHVRSPPLRPRSPPPSRSPPPMASPPMSPPSNSCPIDTLKLKVCANVLNDLLNVTNGTPQCCSLIEGLVDLEAAICLCTVIKANVLGIKANATLNITVLLNNCGKKIPEGFECS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo24733.1 vs. NCBI nr
Match: gi|902196790|gb|KNA13210.1| (hypothetical protein SOVF_118890 [Spinacia oleracea]) HSP 1 Score: 268.1 bits (684), Expect = 8.700e-69 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
BLAST of Spo24733.1 vs. NCBI nr
Match: gi|902159239|gb|KNA06314.1| (hypothetical protein SOVF_182190 [Spinacia oleracea]) HSP 1 Score: 250.8 bits (639), Expect = 1.400e-63 Identity = 131/140 (93.57%), Postives = 134/140 (95.71%), Query Frame = 1
BLAST of Spo24733.1 vs. NCBI nr
Match: gi|902150090|gb|KNA05371.1| (hypothetical protein SOVF_190960 [Spinacia oleracea]) HSP 1 Score: 241.1 bits (614), Expect = 1.100e-60 Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 1
BLAST of Spo24733.1 vs. NCBI nr
Match: gi|720026390|ref|XP_010264242.1| (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Nelumbo nucifera]) HSP 1 Score: 141.4 bits (355), Expect = 1.200e-30 Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 1
BLAST of Spo24733.1 vs. NCBI nr
Match: gi|764626761|ref|XP_011469171.1| (PREDICTED: 14 kDa proline-rich protein DC2.15 [Fragaria vesca subsp. vesca]) HSP 1 Score: 137.9 bits (346), Expect = 1.400e-29 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1
BLAST of Spo24733.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R119_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118890 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 6.100e-69 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 1
BLAST of Spo24733.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGA7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_182190 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.000e-63 Identity = 131/140 (93.57%), Postives = 134/140 (95.71%), Query Frame = 1
BLAST of Spo24733.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFN8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190960 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 7.900e-61 Identity = 127/140 (90.71%), Postives = 131/140 (93.57%), Query Frame = 1
BLAST of Spo24733.1 vs. UniProtKB/TrEMBL
Match: A0A103XRI6_CYNCS (Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_002416 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.200e-29 Identity = 78/150 (52.00%), Postives = 103/150 (68.67%), Query Frame = 1
BLAST of Spo24733.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DV88_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_015590 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.600e-29 Identity = 82/159 (51.57%), Postives = 101/159 (63.52%), Query Frame = 1
BLAST of Spo24733.1 vs. ExPASy Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.500e-28 Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 1
BLAST of Spo24733.1 vs. ExPASy Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.300e-27 Identity = 74/168 (44.05%), Postives = 100/168 (59.52%), Query Frame = 1
BLAST of Spo24733.1 vs. ExPASy Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.800e-27 Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1
BLAST of Spo24733.1 vs. ExPASy Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.000e-24 Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 1
BLAST of Spo24733.1 vs. ExPASy Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.200e-23 Identity = 75/182 (41.21%), Postives = 102/182 (56.04%), Query Frame = 1
BLAST of Spo24733.1 vs. TAIR (Arabidopsis)
Match: AT4G12470.1 (azelaic acid induced 1) HSP 1 Score: 127.1 bits (318), Expect = 8.500e-30 Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 1
BLAST of Spo24733.1 vs. TAIR (Arabidopsis)
Match: AT1G62510.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 124.4 bits (311), Expect = 5.500e-29 Identity = 74/152 (48.68%), Postives = 94/152 (61.84%), Query Frame = 1
BLAST of Spo24733.1 vs. TAIR (Arabidopsis)
Match: AT4G12480.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 124.0 bits (310), Expect = 7.200e-29 Identity = 74/168 (44.05%), Postives = 100/168 (59.52%), Query Frame = 1
BLAST of Spo24733.1 vs. TAIR (Arabidopsis)
Match: AT2G45180.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 4.600e-28 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = 1
BLAST of Spo24733.1 vs. TAIR (Arabidopsis)
Match: AT1G12090.1 (extensin-like protein) HSP 1 Score: 119.8 bits (299), Expect = 1.400e-27 Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24733.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo24733.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo24733.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo24733.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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