Spo24877.1 (mRNA) | SpinachBase

Overview


Name	Spo24877.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Gibberellin-regulated protein 6 (GAST1 protein homolog 6) (Precursor)
Location	SpoScf_02767 : 17830 .. 19656 (-)
Sequence length	1241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTTGTTGCAATAAAAGAAAAAAGTTATTTAAAAGTAGCAAGTATACCGGTCACAACTGTCTATAAATAGGGTCCAAAAATCGTTAGTAACCACCAACTCCATCAGTCTCATTTCTCTCCGACCTTCACTTTTCTATCTATTTTCTTTCTCCACTTTAGATTATAGATAACACATTTTTTGTTGAAGATTAACAACAATGGGTATCAAAGTTCTGTATACCATTTTCATTTTTGTTATTTTCCTCCACTTTTCTCCTGCAGAAAATCATGTAAGTTCCGAAATTCACAATGAATAGTTTGGATTCGTTTCCTTGATTAGTCTCATATTAAAAGCGATGGAAACACGTACAGTTAGTTACCCATTACGATTTCCAAGTTAGTATTATATAATGGAGGAAAATGTTTGATGTTTATTATCCTAGTGAAATTTCCTTGTATGCACGGATGGATCCGTATAACCGTCATCAATAATGCTCTAACTTTTCCAGTTTCCTTTAAAACAAAAAGTAGCAGCTCTGGTTTTTCTGTTAATTTGTCAACAAAGTTTTGAGTTTTGACCATTTTAATGAGTGATTTTGTTAATGAATGCAGCCAACCCATCAGCATAAGGGCCATACCCAGCCTCCAAGTCCAAGCCCACTATCCTCATACACCTTGCCTTCGGTAAGATCGATGAGCTGCTTTTGCTACGGTTTTCTGGGCAATTTATAAATTAATAATGTAAATTTATAAATTTTAAAGCTCTAAACCACTAACTTGGAAACTTTGATAAATTTCAGTATGGTTTTACCCAAGGAAGTCTCCAGCCTCAAGGTACTACTATACTAATTACTAAGCTCAACTATATATATGTTCGATCTTATATTTCTGATTTCACTTACTGGAATACTAGCTGTTTAGATATTTAAAATTGGAACTTAATTATTTCCAATTATAACTAATTAATTGTTAATTGGAACAGAATGTGGAACAAGATGTGCTTATAGATGTTCAAACACACAGTATAGGAAGCCATGCTTGTTTTTCTGTAACAAGTGTTGTGCCAAGTGCTTGTGTGTGCCTACTGGTACTTACGGCAACAAACAAGCTTGCCCTTGCTACAACAACTGGAAGACCAAGAGGGGTGGTCCCAAATGTCCCTAAACTTATACGGAGTACAACTACTACTCTTTTAACGCAAGCTCACCCTATAACTCTAAGTCTATTATTCTTTCAGTAATTCAGAGTTGAGCTTCGTATGTTCCCAATTTCAGGAATAGCTTTCCTAACAAATATTGTTGCTTTCCTAAAGTCTCAAACTCGAGAAATTGGTTAAGCCGGAACAATTCTCTTATCATTTGATCCAAACACTTGTACGTTAATCCTCGTCTACTTACCTATACTTCTATACTTTTTTATTTTCACTATTTTGACATTTCCTCCATGTCATGCATGTTTCTTAATATAAAATGTCCCTATCAATAATGTAATATGATGTATTGTTATGTTTATAAGGATGTAATTTGGGAATTAAGATTATATTATGTGGAATAAAAGTTTTGTAACTTTGTCGTGGCTAATGCGAAATATTTGAAGACGAGAAATAATTTCACTATCCAAGATCGAGCATTGCTCTCGCCCAGTAGCCCCTTGTACGTAATAATTAGTTATCACCGTACTACTTGAAAAAATTGGTTGTTTAGAGTGAAAAGCCTGTATCTATTGGTAAGACTGTACAAGAGCACAAGAGAACAGGAGCATATCACAAGCGAACGTTATTTAAAGCTACTAATTTTAACGTTTGACAAAAGTTACCCAATCACTACATCTACCGCTAATCGCTA

mRNA sequence

TTTAATTTGTTGCAATAAAAGAAAAAAGTTATTTAAAAGTAGCAAGTATACCGGTCACAACTGTCTATAAATAGGGTCCAAAAATCGTTAGTAACCACCAACTCCATCAGTCTCATTTCTCTCCGACCTTCACTTTTCTATCTATTTTCTTTCTCCACTTTAGATTATAGATAACACATTTTTTGTTGAAGATTAACAACAATGGGTATCAAAGTTCTGTATACCATTTTCATTTTTGTTATTTTCCTCCACTTTTCTCCTGCAGAAAATCATCCAACCCATCAGCATAAGGGCCATACCCAGCCTCCAAGTCCAAGCCCACTATCCTCATACACCTTGCCTTCGTATGGTTTTACCCAAGGAAGTCTCCAGCCTCAAGAATGTGGAACAAGATGTGCTTATAGATGTTCAAACACACAGTATAGGAAGCCATGCTTGTTTTTCTGTAACAAGTGTTGTGCCAAGTGCTTGTGTGTGCCTACTGGTACTTACGGCAACAAACAAGCTTGCCCTTGCTACAACAACTGGAAGACCAAGAGGGGTGGTCCCAAATGTCCCTAAACTTATACGGAGTACAACTACTACTCTTTTAACGCAAGCTCACCCTATAACTCTAAGTCTATTATTCTTTCAGTAATTCAGAGTTGAGCTTCGTATGTTCCCAATTTCAGGAATAGCTTTCCTAACAAATATTGTTGCTTTCCTAAAGTCTCAAACTCGAGAAATTGGTTAAGCCGGAACAATTCTCTTATCATTTGATCCAAACACTTGTACGTTAATCCTCGTCTACTTACCTATACTTCTATACTTTTTTATTTTCACTATTTTGACATTTCCTCCATGTCATGCATGTTTCTTAATATAAAATGTCCCTATCAATAATGTAATATGATGTATTGTTATGTTTATAAGGATGTAATTTGGGAATTAAGATTATATTATGTGGAATAAAAGTTTTGTAACTTTGTCGTGGCTAATGCGAAATATTTGAAGACGAGAAATAATTTCACTATCCAAGATCGAGCATTGCTCTCGCCCAGTAGCCCCTTGTACGTAATAATTAGTTATCACCGTACTACTTGAAAAAATTGGTTGTTTAGAGTGAAAAGCCTGTATCTATTGGTAAGACTGTACAAGAGCACAAGAGAACAGGAGCATATCACAAGCGAACGTTATTTAAAGCTACTAATTTTAACGTTTGACAAAAGTTACCCAATCACTACATCTACCGCTAATCGCTA

Coding sequence (CDS)

ATGGGTATCAAAGTTCTGTATACCATTTTCATTTTTGTTATTTTCCTCCACTTTTCTCCTGCAGAAAATCATCCAACCCATCAGCATAAGGGCCATACCCAGCCTCCAAGTCCAAGCCCACTATCCTCATACACCTTGCCTTCGTATGGTTTTACCCAAGGAAGTCTCCAGCCTCAAGAATGTGGAACAAGATGTGCTTATAGATGTTCAAACACACAGTATAGGAAGCCATGCTTGTTTTTCTGTAACAAGTGTTGTGCCAAGTGCTTGTGTGTGCCTACTGGTACTTACGGCAACAAACAAGCTTGCCCTTGCTACAACAACTGGAAGACCAAGAGGGGTGGTCCCAAATGTCCCTAA

Protein sequence

MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24877	Spo24877	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24877.1	Spo24877.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24877.1.utr5p.1	Spo24877.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24877.1.CDS.4	Spo24877.1.CDS.4	CDS
Spo24877.1.CDS.3	Spo24877.1.CDS.3	CDS
Spo24877.1.CDS.2	Spo24877.1.CDS.2	CDS
Spo24877.1.CDS.1	Spo24877.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24877.1.utr3p.1	Spo24877.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24877.1.exon.4	Spo24877.1.exon.4	exon
Spo24877.1.exon.3	Spo24877.1.exon.3	exon
Spo24877.1.exon.2	Spo24877.1.exon.2	exon
Spo24877.1.exon.1	Spo24877.1.exon.1	exon

Homology

[Close]

BLAST of Spo24877.1 vs. NCBI nr
Match: gi|902108065|gb|KNA03687.1| (hypothetical protein SOVF_206730 [Spinacia oleracea])

HSP 1 Score: 265.4 bits (677), Expect = 4.800e-68
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1

		  
Query: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60
           MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE
Sbjct: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60

Query: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP
Sbjct: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 119

[Close]

BLAST of Spo24877.1 vs. NCBI nr
Match: gi|731324413|ref|XP_010672957.1| (PREDICTED: gibberellin-regulated protein 13-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 203.4 bits (516), Expect = 2.300e-49
Identity = 94/119 (78.99%), Postives = 99/119 (83.19%), Query Frame = 1

		  
Query: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60
           M +K+LY IF FVIFLHFSPAENH      G T+ PSPSP  S T+PSYG T GSLQPQE
Sbjct: 1   MAMKLLYAIFFFVIFLHFSPAENHKV----GKTEVPSPSPQPSSTMPSYGSTPGSLQPQE 60

Query: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           CG RCA RCSNTQY+KPCLFFCNKCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  CGPRCATRCSNTQYKKPCLFFCNKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 115

[Close]

BLAST of Spo24877.1 vs. NCBI nr
Match: gi|731324415|ref|XP_010672958.1| (PREDICTED: gibberellin-regulated protein 13-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 203.0 bits (515), Expect = 2.900e-49
Identity = 94/119 (78.99%), Postives = 99/119 (83.19%), Query Frame = 1

		  
Query: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60
           M +K+LY IF FVIFLHFSPAEN     H G T+ PSPSP  S T+PSYG T GSLQPQE
Sbjct: 1   MAMKLLYAIFFFVIFLHFSPAEN-----HVGKTEVPSPSPQPSSTMPSYGSTPGSLQPQE 60

Query: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           CG RCA RCSNTQY+KPCLFFCNKCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  CGPRCATRCSNTQYKKPCLFFCNKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 114

[Close]

BLAST of Spo24877.1 vs. NCBI nr
Match: gi|645271074|ref|XP_008240742.1| (PREDICTED: protein GAST1 [Prunus mume])

HSP 1 Score: 160.6 bits (405), Expect = 1.700e-36
Identity = 74/111 (66.67%), Postives = 82/111 (73.87%), Query Frame = 1

		  
Query: 9   IFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQECGTRCAYR 68
           I + ++ LHF   ENH T      T+ P+P P  S      G T+GSLQPQECG RC+ R
Sbjct: 10  IVLSLVMLHFLIVENHATTI----TEAPAPQPQGSNNHTMNGITEGSLQPQECGPRCSTR 69

Query: 69  CSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           CSNTQY+KPCLFFC KCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 70  CSNTQYKKPCLFFCQKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 116

[Close]

BLAST of Spo24877.1 vs. NCBI nr
Match: gi|59042581|gb|AAW83819.1| (GASA2-like protein [Pelargonium zonale])

HSP 1 Score: 160.2 bits (404), Expect = 2.200e-36
Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 1

		  
Query: 33  TQPPSPSPLSSYTLPSYGFTQGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCV 92
           T+ PSP P S      YG T+GSLQPQECG RC+ RCSNTQY+KPCLFFCNKCCAKCLCV
Sbjct: 31  TEAPSPQPHSQSNHTMYGITEGSLQPQECGPRCSERCSNTQYKKPCLFFCNKCCAKCLCV 90

Query: 93  PTGTYGNKQACPCYNNWKTKRGGPKCP 120
           P GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 91  PPGTYGNKQFCPCYNNWKTKRGGPKCP 117

[Close]

BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q8T4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_206730 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 3.400e-68
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1

		  
Query: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60
           MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE
Sbjct: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60

Query: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP
Sbjct: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 119

[Close]

BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CN04_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062340 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.600e-49
Identity = 94/119 (78.99%), Postives = 99/119 (83.19%), Query Frame = 1

		  
Query: 1   MGIKVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQE 60
           M +K+LY IF FVIFLHFSPAENH      G T+ PSPSP  S T+PSYG T GSLQPQE
Sbjct: 1   MAMKLLYAIFFFVIFLHFSPAENHKV----GKTEVPSPSPQPSSTMPSYGSTPGSLQPQE 60

Query: 61  CGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           CG RCA RCSNTQY+KPCLFFCNKCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 61  CGPRCATRCSNTQYKKPCLFFCNKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 115

[Close]

BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
Match: Q5EDG3_9ROSI (GASA2-like protein OS=Pelargonium zonale PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.500e-36
Identity = 69/87 (79.31%), Postives = 73/87 (83.91%), Query Frame = 1

		  
Query: 33  TQPPSPSPLSSYTLPSYGFTQGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCV 92
           T+ PSP P S      YG T+GSLQPQECG RC+ RCSNTQY+KPCLFFCNKCCAKCLCV
Sbjct: 31  TEAPSPQPHSQSNHTMYGITEGSLQPQECGPRCSERCSNTQYKKPCLFFCNKCCAKCLCV 90

Query: 93  PTGTYGNKQACPCYNNWKTKRGGPKCP 120
           P GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 91  PPGTYGNKQFCPCYNNWKTKRGGPKCP 117

[Close]

BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
Match: M5XG21_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023616mg PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.000e-36
Identity = 73/116 (62.93%), Postives = 83/116 (71.55%), Query Frame = 1

		  
Query: 4   KVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQECGT 63
           + L  + + ++ LHF   ENH T       + P+P P  S      G T+GSLQPQECG 
Sbjct: 3   RTLRIVMLCLVMLHFLIVENHATTI----AEAPAPQPQGSNNHTMSGITEGSLQPQECGP 62

Query: 64  RCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           RC+ RCSNTQY+KPCLFFC KCCAKCLCVP GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 63  RCSTRCSNTQYKKPCLFFCQKCCAKCLCVPPGTYGNKQFCPCYNNWKTKRGGPKCP 114

[Close]

BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
Match: B9SVR9_RICCO (GAST1 protein, putative OS=Ricinus communis GN=RCOM_0255000 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 9.900e-36
Identity = 69/116 (59.48%), Postives = 82/116 (70.69%), Query Frame = 1

		  
Query: 4   KVLYTIFIFVIFLHFSPAENHPTHQHKGHTQPPSPSPLSSYTLPSYGFTQGSLQPQECGT 63
           K  + +F+  + L F          H   ++ P+P P  + +LP YG TQGSLQPQ+CG 
Sbjct: 7   KASFAMFVLALMLLFI------LESHASTSEAPAPQPQQNSSLPKYGSTQGSLQPQDCGP 66

Query: 64  RCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKRGGPKCP 120
           +C  RCS TQY KPC+FFC KCCAKCLCVP+GTYGNKQ CPCYNNWKTKRGGPKCP
Sbjct: 67  QCTRRCSKTQYHKPCMFFCQKCCAKCLCVPSGTYGNKQTCPCYNNWKTKRGGPKCP 116

[Close]

BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.300e-32
Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1

		  
Query: 49  YGFTQGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNN 108
           YG ++G L PQ+C  +C YRCS T Y+KPC+FFC KCCAKCLCVP GTYGNKQ+CPCYNN
Sbjct: 42  YGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNN 101

Query: 109 WKTKRGGPKCP 120
           WKTKRGGPKCP
Sbjct: 102 WKTKRGGPKCP 112

[Close]

BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
Match: GASAD_ARATH (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.400e-29
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 1

		  
Query: 52  TQGSLQPQ-ECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWK 111
           T+ ++ P  ECG RC  RCSNTQY+KPCLFFCNKCC KCLCVP GTYGNKQ CPCYNNWK
Sbjct: 35  TKSAIPPLLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWK 94

Query: 112 TKRGGPKCP 120
           TK GGPKCP
Sbjct: 95  TKSGGPKCP 103

[Close]

BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
Match: GASA6_ARATH (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 5.800e-29
Identity = 54/78 (69.23%), Postives = 62/78 (79.49%), Query Frame = 1

		  
Query: 42  SSYTLPSYGFTQGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQ 101
           + Y   SYG   GSL+  +CG +C  RCSNT+Y KPC+FFC KCCAKCLCVP GTYGNKQ
Sbjct: 26  AEYHPESYG--PGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQ 85

Query: 102 ACPCYNNWKTKRGGPKCP 120
            CPCYNNWKT++GGPKCP
Sbjct: 86  VCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
Match: GASAC_ARATH (Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12 PE=3 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 2.900e-28
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 1

		  
Query: 53  QGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTK 112
           +GSL+P+EC   C YRCS T +RKPCLFFCNKCC KCLCVP+GTYG+K+ CPCYNNW TK
Sbjct: 40  EGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTK 99

Query: 113 RGGPKCP 120
            GGPKCP
Sbjct: 100 EGGPKCP 106

[Close]

BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
Match: GASA5_ARATH (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.200e-27
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1

		  
Query: 54  GSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKR 113
           G L+PQ+C ++C++RCS T ++KPC+FFC KCC KCLCVP GT+GNKQ CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 114 GGPKCP 120
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Spo24877.1 vs. TAIR (Arabidopsis)
Match: AT3G10185.1 (Gibberellin-regulated family protein)

HSP 1 Score: 128.6 bits (322), Expect = 2.500e-30
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 1

		  
Query: 52  TQGSLQPQ-ECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWK 111
           T+ ++ P  ECG RC  RCSNTQY+KPCLFFCNKCC KCLCVP GTYGNKQ CPCYNNWK
Sbjct: 35  TKSAIPPLLECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWK 94

Query: 112 TKRGGPKCP 120
           TK GGPKCP
Sbjct: 95  TKSGGPKCP 103

[Close]

BLAST of Spo24877.1 vs. TAIR (Arabidopsis)
Match: AT1G74670.1 (Gibberellin-regulated family protein)

HSP 1 Score: 128.3 bits (321), Expect = 3.200e-30
Identity = 54/78 (69.23%), Postives = 62/78 (79.49%), Query Frame = 1

		  
Query: 42  SSYTLPSYGFTQGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQ 101
           + Y   SYG   GSL+  +CG +C  RCSNT+Y KPC+FFC KCCAKCLCVP GTYGNKQ
Sbjct: 26  AEYHPESYG--PGSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQ 85

Query: 102 ACPCYNNWKTKRGGPKCP 120
            CPCYNNWKT++GGPKCP
Sbjct: 86  VCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Spo24877.1 vs. TAIR (Arabidopsis)
Match: AT2G30810.1 (Gibberellin-regulated family protein)

HSP 1 Score: 125.9 bits (315), Expect = 1.600e-29
Identity = 50/67 (74.63%), Postives = 57/67 (85.07%), Query Frame = 1

		  
Query: 53  QGSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTK 112
           +GSL+P+EC   C YRCS T +RKPCLFFCNKCC KCLCVP+GTYG+K+ CPCYNNW TK
Sbjct: 40  EGSLKPEECPKACEYRCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTK 99

Query: 113 RGGPKCP 120
            GGPKCP
Sbjct: 100 EGGPKCP 106

[Close]

BLAST of Spo24877.1 vs. TAIR (Arabidopsis)
Match: AT3G02885.1 (GAST1 protein homolog 5)

HSP 1 Score: 120.9 bits (302), Expect = 5.200e-28
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 1

		  
Query: 54  GSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKR 113
           G L+PQ+C ++C++RCS T ++KPC+FFC KCC KCLCVP GT+GNKQ CPCYNNWKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 114 GGPKCP 120
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Spo24877.1 vs. TAIR (Arabidopsis)
Match: AT5G15230.1 (GAST1 protein homolog 4)

HSP 1 Score: 109.0 bits (271), Expect = 2.000e-24
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 1

		  
Query: 54  GSLQPQECGTRCAYRCSNTQYRKPCLFFCNKCCAKCLCVPTGTYGNKQACPCYNNWKTKR 113
           GSL+  +C + C  RC  TQY K C+ FCNKCC KCLCVP G YGNKQ C CYNNWKT+ 
Sbjct: 41  GSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQE 100

Query: 114 GGPKCP 120
           GGPKCP
Sbjct: 101 GGPKCP 106

The following BLAST results are available for this feature:

BLAST of Spo24877.1 vs. NCBI nr
BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
BLAST of Spo24877.1 vs. TAIR (Arabidopsis)

BLAST of Spo24877.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902108065\|gb\|KNA03687.1\|	4.8e-68	100.	hypothetical protein SOVF_2067...	[more]
gi\|731324413\|ref\|XP_010672957.1\|	2.3e-49	78.9	PREDICTED: gibberellin-regulat...	[more]
gi\|731324415\|ref\|XP_010672958.1\|	2.9e-49	78.9	PREDICTED: gibberellin-regulat...	[more]
gi\|645271074\|ref\|XP_008240742.1\|	1.7e-36	66.6	PREDICTED: protein GAST1 [Prun...	[more]
gi\|59042581\|gb\|AAW83819.1\|	2.2e-36	79.3	GASA2-like protein [Pelargoniu...	[more]

BLAST of Spo24877.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
A0A0K9Q8T4_SPIOL	3.4e-68	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CN04_BETVU	1.6e-49	78.9	Uncharacterized protein OS=Bet...	[more]
Q5EDG3_9ROSI	1.5e-36	79.3	GASA2-like protein OS=Pelargon...	[more]
M5XG21_PRUPE	2.0e-36	62.9	Uncharacterized protein OS=Pru...	[more]
B9SVR9_RICCO	9.9e-36	59.4	GAST1 protein, putative OS=Ric...	[more]

BLAST of Spo24877.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
GAST1_SOLLC	4.3e-32	76.0	Protein GAST1 OS=Solanum lycop...	[more]
GASAD_ARATH	4.4e-29	78.2	Gibberellin-regulated protein ...	[more]
GASA6_ARATH	5.8e-29	69.2	Gibberellin-regulated protein ...	[more]
GASAC_ARATH	2.9e-28	74.6	Gibberellin-regulated protein ...	[more]
GASA5_ARATH	9.2e-27	69.7	Gibberellin-regulated protein ...	[more]

BLAST of Spo24877.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
AT3G10185.1	2.5e-30	78.2	Gibberellin-regulated family p...	[more]
AT1G74670.1	3.2e-30	69.2	Gibberellin-regulated family p...	[more]
AT2G30810.1	1.6e-29	74.6	Gibberellin-regulated family p...	[more]
AT3G02885.1	5.2e-28	69.7	GAST1 protein homolog 5	[more]
AT5G15230.1	2.0e-24	66.6	GAST1 protein homolog 4	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 60..119 score: 2.6
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 45..119 score: 3.1
None	No IPR available	PANTHER	PTHR23201:SF8	SUBFAMILY NOT NAMED	coord: 45..119 score: 3.1