Spo24886.1 (mRNA)

Overview
NameSpo24886.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionLETM1-like protein
LocationSpoScf_01189 : 58359 .. 63630 (-)
Sequence length843
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACAGAGTTTCGGGCTAAGGAAGGTTTTTGTTCTTTTTTAGAATATATTTATGAGATTTTATTTCTAAAAGCTAATCAGGTAATTTTGATTGCTTAATCCCCAGTTTTGATTTTGATGATGTTGGCCTATCTTAAAAACCAACTGTTTTATTTTAGCAACTTATTTTGGAATCTGTTTATTGTGTTGTGTTCTGTGGGTCTTCTGTAAACCCTGCTGCTTTTCAGCAGCAAGTTCTCCATGATTCTAATCTGATGGCCCAATTGTTTCAGGTATTGTTGTTTTCATAGCATAATTCTTTGATTATATAATTTCTGGATGACAAGTGGAGCCGATAGATGGTCTGTGAACAAGAGCTGCTGAAAAACAAAAGCAGCTCTGTGAACTTAGTCGTGTGTTGGCTGTTTTGGCTTCTGCATCTGTATGAAGATTCTATAAACATTTTTTTCTTCAGTCCTGTTGGATGGAATGATCTGAATTGGTACTGATCATTTTTGCATTAACTTTGCAGTTAGGTAGCAGGGAACGTGAGGAGTTCTTGAGGCATGTCAATAAAGAGGTATGCCCTGTAGAGTAGGCAGATATTTTGGATAAATGATAACTTTAACAAAAAGATCTCTTTCCTGTGATTCTTATCATAAAGGTGAAAAATCTAATTTTGGTTTTTCTTCCTCATTATTATGAGCTTTAGCATGTGAAATTTGTTGTTTCCTCCATTATTTTCTTTTAGCGGGGGAGGGTGGTTTCAACGATGGCATAAGTCCTCTTGCTCTCTCATCATTTAATGATTTCCATGGCAGAGCTGTGATATCATTTTTCTTTGGATTTCTTCATGTTTGTTTGGCTTGTTTCTGGTATCTAAATCCAATCGAAAGTTCATAGAGTTATGCTGCTCGTATTGTAATCTAATTGATGGTACTGACTTGATTGCCTATTACTATTATTAGAGGTATATAATATGGGCCTAGTTTGGGATTCATTTCTTAACTTTAATTTGGAACTTTGGCTTCTCGATGAATATGGTGATTTGACTTGACAGTTGAATTTAGTTGCCTGATTTTTTTCCAGTTATCCTAAAGAGTCTTTTGGTTTGCTGCTTTCTTATTGATACTTGAGATTCTCTTTTTCAAGTGCACACATTCACGCTGATGGTGACATGCTCCTCCATTCTGACAATCTTCCATCAAAAGAAAAGAGGAACAGGAGAATTGCTAGTAACAAAAAACGAATTATTAAATGCTTCTATTAATAGGTTTGGTGTGGCTAATCAGTTGTTCGATTGTACTTGAAACTTCTCCTAGCAAACTGAAATTGTGAAAAATTCTTGTTTTTTCCTTTTAGATAGATATATATAATACCNTGGTTGAGAAGGAGGGTACAGATGGTGAAGCAGATTCTCTGAAGGCCTATAAGGCTGCTCGAGAAGAAAGTGATCAAGCTGCTGAAGTGGATGTTGGGGACGAGGTCTCATCAGCGCTCGTAGACCGGGTGAGTCTGGTTAATCTACAGATTTATGGACCAGCTTTAGTATATAGGTGACACTTACTCATTATATTTGTCATGTTCATGCTGGTAGGTCGATGTAATGCTTCAGAAACTGGAAAAAGAAATTGATGATGTGGATGCCAAAATTAGTGATCGCTGGCAGCTTCTTGACAGGTGCAGTAGATGATAAGTTAATGCTTTAGATATAGTTTTTAACTAATAATTAAAGACGAAGATCTACTATTTAGAGTCTGCTTGCATTTGAAATAGTGTGTGCTTCTCTTTCCCCAAAGAAGACTGGGTACAATCTGCTATTAATATACTGCAATCTGTTTTTTGGGACTGTTTAAACTATACAACTACATACTAAACAGTAGACATTAGTCTCTAATCAAGGACTCGACGTCTAGCAAGTGTTTAACTGTTCTCTCGGAAATGTGACTCCGAGTAATGCACATAATCCTATTCTCAAGACAAGCTTCTTCTGAAAGTTACTCTGTAGGTGCTTAAATAGGAAAGTTTGCTATCTGTTGTAGTACTCCTCGCACGTGTGCTTAGTTAAACTAAATAGATGCTTGTGATTATTCTGTTTTCATTGACAAATTTAGGGGATAATCTGTAGAGAAGTATGAATACAAAAATATATACTCTAGGAGAGTAGGAGTGTTGTAGGACTACTAAAATTGAGACATTTTGAAGCTTAACCAAGTTCTCTTTCTAACTATTCAGGAATTAATGCTCTAATTGTGTAGGGCTTACTATGGGTACAAGGCTTTTTTTAGTGAGCTTTCTCTCTTTAAACCACCAAGACAAAAGTAAATGTTCAGAAGAGAACTTAGTTGGAGATAAAATTTGATAAAAACAAGTAATGCCTTTTCATTAGTACTGGTTGATGCCTTGAGGTTTATTTTGTTCTTAACATTCAGGAAACTACCTTGTTCTAATAATTTTCTCGCGAATGACCACTTTTGAGCACCTAAATTGACCATATTGCTTTGCTTTAGTCCTTACATATATGCAATGACAAAATAATCAATCAGTTTGGCTTAACGTGGTAAATGTAAGAAAAACTACAATAAAAGAATGATATCACGGCGAAACTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAATTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACTGTTTTGCAGGTATGGTGGAACCAATATGGCGTATAAACATAGATTATGTGTCTGTGAGCTATCCATTCTGTTTTTTACACAAAGCGAATCATATATGTCCTGTCAAGTTCGAAGTCTTTTACCAGTCCTGACAACTAACTCTATGCTTAGCTTTAAGATATTAAGCATGGTACTATTAGCTTACTAGTGTGGAGCTGAAGCATCCCCTGGCTTAGCAGTTCTCTCATTCCTCTTTCTTGTAGCTAACCTACTTAACAAATTAACATAGTGGACATATAAATTGGTACAATTCGTATCTTGGTCTCACAATAGGTCAGGTATTTAGGTTATTCCGAAAGGTGTTCAGTTGTTTTATACAGAAATGGCGCTGGCAGCCTGGCACCTCCTACCACTCCCCCCCCCCCTTCCCACACCCCCTGTAGATCGTCCTGATAAATTCAAGGAAAAAGAAAGCCTCTAACATTGCTATGCAAAGACTTGGCAGACATACTTTAACCAGTTACTATGCTATTCCGATTCTGAAACTACACGCTGTCACCTATTTCAACAGATTCTAAGCAAAAACTTCTGAATGTTAGGTGTTGGATGCTACTCATGACAATTATATGTATCTGTTAGGTGTAATATGTTCTATATAATCTCACATAGTTTATGTGTTGGTTTGCAATTTTCAATAATTTCACATAGTTTAGATACTTCCATACTTATACACTTTTATGGTATTAAGATTTATAATGAAAATAACTTTAAAAGTCCAATTATAAGTTTTATTAAAATATAAAAATCAAATAACCTCAACATTGTTTAATGTAAAATACCTGCTGCTACTTGCAGTTCTTTGAGCATGGAATGAGTATTCAAAGAAGAGAACTTGTCGTCAAGCTTGATGGTCATGTGCTGACCCTTAGCTTGCAAATGTATGGTTGCCGTGTTATCCAAAAGGTATTGTTGACTCGTCATTTAAGTTTTGATTTTGTGATGGGTTTCTTTGTTTTTCAGTTTTGAAATAAATTTTCTGCAGAGACTTGCTTGTTTGGAGATGTATTGACGTGACTAAAGTATTGGTTTCATACATACTTTTGTTATTCTATTTGCAATTCCATGGTTGTTTGGAAACCTAATGTGCTTCTACAAGCTGTGCTAGATCCCTTTCACGTCAATTGGTTTTTGTTGTTATGGTAAAGAATTCATATTGTATAACTGTTCCATCTTTTTGGTTTTGCTTCACTTAAATTAATTCAAACTTTGCTACTGTTCAAATTGAGTCTTGCAGCAACTTGTCTCCTGATATAGTCTAGACACTTAAACAATGGTACTGAAACATGCAATTATTCTTCTTTCCTGTCAGAGTGTCTGGTAATCACACCTATTTCCTTCAATTTTTTCCCCTAATCTAATCTAAATGCTAGTAGCTACTACGTGGAGCACATTGCATCATTGTGAGTGGTTTAATTACTATAGGTTATGCTTTTGCTAACTTCCCTCTAGACCTTTGCATGTGTTCAATTACCCAACTGTTTTGGTTACTAGTTTATGTAAATATGAACATGGCTTTTGGTGAAATGTCGTTTGATTCCACATGATTTCATTTTAACTTGGGTTTATTTCTGGTGTTTGTGATACTCCCAGCTACTAAAAACAAACACTATCTGCTATTTTTACAGTTTTTATGTAGCTTCTAAGTTTTTTTTTTAATTATTGTTGGTGATGATTATTAGTGAATTGTTATTTTGACATATTTACTTTGGAAGGTTAAAAAGTTTGTTTGTTGATTTTGAATTGATAATTTCCTGTCCCCATTATTGAGTAGATTCCTGTTATCAGTTACAGTTACTCTTTTTTCCTGTGTGTTGTTCTTGTGTTGTTGATGTTATCTTGGTTTGGTTTTCGACTGTTGCGGTCAATCGGTGAATGGTGTAATAGTAGTTTGAAGTATTAGTAAATATTTCATATATGGTTTTGAGGCTTATAAATGTGGGACAATATGAATCAATTATAAATTTATAAGTAATACTTTAGTCCTTAAGCTTAAGGTGTAAGCCATAAAGTAATCAAGTTACGGCATTGTGGTACACTTGGTGAGTTCTTGGCATTTGAGTGCAAAAGTAGATGGTAGCAGACATGAATATGAGAAGTGGTAGCAGACACGAGTTTAAGTTTGCAATCAACTAACATGTAAATTTAAATTTGTCAATTGCAGATATATTTTGGAGCGAAATGAGTTGGAATTTTACATGAAGAAAATCCAGAAGAAGGGGAATGTTGCTGTAGAATCAGATTAGGGATTTGATGTCGTAATGTTTATGTCACCTCTAGTTAAACTCCGGCTCCCAGTTTTTACCAATGCATCATTAATGTTGTAGTTAAACTATGTTTTGTTCAATGTTTGTGCTAAAAAAATTATGGAGGCTAGTACCTAGTACCAATGCATAATTAATGCTAAATAAATATACTATTTGCAGTGCGCTACCGTTAAGCGAATGCTGCGAAGAGTGTCAGAAATTTGCCTTCGAAAAACACTATTTGCAGCGCTTCTGTTCGCTGCAAATAAAAGTCCATTATTT

mRNA sequence

ATGTTAACAGAGTTTCGGGCTAAGGAAGCTGCTGAAAAACAAAAGCAGCTCTGTGAACTTAGTCGTGTGTTGGCTGTTTTGGCTTCTGCATCTTTAGGTAGCAGGGAACGTGAGGAGTTCTTGAGGCATGTCAATAAAGAGATAGATATATATAATACCNTGGTTGAGAAGGAGGGTACAGATGGTGAAGCAGATTCTCTGAAGGCCTATAAGGCTGCTCGAGAAGAAAGTGATCAAGCTGCTGAAGTGGATGTTGGGGACGAGGTCTCATCAGCGCTCGTAGACCGGGTCGATGTAATGCTTCAGAAACTGGAAAAAGAAATTGATGATGTGGATGCCAAAATTAGTGATCGCTGGCAGCTTCTTGACAGTTCTTTGAGCATGGAATGAGTATTCAAAGAAGAGAACTTGTCGTCAAGCTTGATGGTCATGTGCTGACCCTTAGCTTGCAAATGTATGGTTGCCGTGTTATCCAAAAGATATATTTTGGAGCGAAATGAGTTGGAATTTTACATGAAGAAAATCCAGAAGAAGGGGAATGTTGCTGTAGAATCAGATTAGGGATTTGATGTCGTAATGTTTATGTCACCTCTAGTTAAACTCCGGCTCCCAGTTTTTACCAATGCATCATTAATGTTGTAGTTAAACTATGTTTTGTTCAATGTTTGTGCTAAAAAAATTATGGAGGCTAGTACCTAGTACCAATGCATAATTAATGCTAAATAAATATACTATTTGCAGTGCGCTACCGTTAAGCGAATGCTGCGAAGAGTGTCAGAAATTTGCCTTCGAAAAACACTATTTGCAGCGCTTCTGTTCGCTGCAAATAAAAGTCCATTATTT

Coding sequence (CDS)

ATGTTAACAGAGTTTCGGGCTAAGGAAGCTGCTGAAAAACAAAAGCAGCTCTGTGAACTTAGTCGTGTGTTGGCTGTTTTGGCTTCTGCATCTTTAGGTAGCAGGGAACGTGAGGAGTTCTTGAGGCATGTCAATAAAGAGATAGATATATATAATACCNTGGTTGAGAAGGAGGGTACAGATGGTGAAGCAGATTCTCTGAAGGCCTATAAGGCTGCTCGAGAAGAAAGTGATCAAGCTGCTGAAGTGGATGTTGGGGACGAGGTCTCATCAGCGCTCGTAGACCGGGTCGATGTAATGCTTCAGAAACTGGAAAAAGAAATTGATGATGTGGATGCCAAAATTAGTGATCGCTGGCAGCTTCTTGACAGTTCTTTGAGCATGGAATGA

Protein sequence

MLTEFRAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLDSSLSME
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo24886Spo24886gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo24886.1Spo24886.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24886.1.CDS.6Spo24886.1.CDS.6CDS
Spo24886.1.CDS.5Spo24886.1.CDS.5CDS
Spo24886.1.CDS.4Spo24886.1.CDS.4CDS
Spo24886.1.CDS.3Spo24886.1.CDS.3CDS
Spo24886.1.CDS.2Spo24886.1.CDS.2CDS
Spo24886.1.CDS.1Spo24886.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24886.1.utr3p.2Spo24886.1.utr3p.2three_prime_UTR
Spo24886.1.utr3p.1Spo24886.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24886.1.exon.7Spo24886.1.exon.7exon
Spo24886.1.exon.6Spo24886.1.exon.6exon
Spo24886.1.exon.5Spo24886.1.exon.5exon
Spo24886.1.exon.4Spo24886.1.exon.4exon
Spo24886.1.exon.3Spo24886.1.exon.3exon
Spo24886.1.exon.2Spo24886.1.exon.2exon
Spo24886.1.exon.1Spo24886.1.exon.1exon


Homology
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|731323538|ref|XP_010672485.1| (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 167.9 bits (424), Expect = 1.100e-38
Identity = 91/112 (81.25%), Postives = 98/112 (87.50%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           +KQ+QLCELSR LAVLAS S  SREREEFLR VNKEID+YNT VEKEGTDGEAD+LKAYK
Sbjct: 580 KKQEQLCELSRALAVLASTSSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEADALKAYK 639

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AAREESD AAEV + D+ S AL+ RVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 640 AAREESDHAAEVAIEDKASPALIARVDAMLQKLEKEIDDVDAKIGDRWQLLD 691
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|225434179|ref|XP_002275474.1| (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Vitis vinifera])

HSP 1 Score: 167.5 bits (423), Expect = 1.500e-38
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELSR LAVLASAS  SREREEFLR VNKEI++YN+ VEKEGTDGE ++++A
Sbjct: 585 AVEKQEQLCELSRALAVLASASSVSREREEFLRLVNKEIELYNSMVEKEGTDGEKEAMEA 644

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAR+ESD AA+V VGDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRW+LLD
Sbjct: 645 YRAARDESDHAAKVAVGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWRLLD 698
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|902231057|gb|KNA22102.1| (hypothetical protein SOVF_036940 [Spinacia oleracea])

HSP 1 Score: 167.2 bits (422), Expect = 1.900e-38
Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 1 

		  

Query: 6   RAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEAD 65
           R K++AE++    +++R LAVLASAS  SREREEFLR VNKEID+YNT VEKEGTDGEAD
Sbjct: 546 RTKDSAEEEG---DVARALAVLASASSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEAD 605

Query: 66  SLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           +LKAYKAAREESD AAEV VGD+VSSAL+DRVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 606 ALKAYKAAREESDHAAEVAVGDKVSSALIDRVDAMLQKLEKEIDDVDAKIGDRWQLLD 660
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|719985460|ref|XP_010251395.1| (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 162.2 bits (409), Expect = 6.200e-37
Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ QLCELSR LAVLASAS  SREREEFLR VNKEI++YN+ VEKEGTDGE ++ +A
Sbjct: 580 ALEKQGQLCELSRALAVLASASSVSREREEFLRMVNKEIELYNSMVEKEGTDGEEEAKRA 639

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AARE+SD AAE   GD++SSAL+DRVD MLQKLEKEIDDVDAKI DRW+LLD
Sbjct: 640 YQAAREDSDHAAERAAGDKISSALIDRVDAMLQKLEKEIDDVDAKIGDRWRLLD 693
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|703117317|ref|XP_010101351.1| (hypothetical protein L484_020366 [Morus notabilis])

HSP 1 Score: 159.1 bits (401), Expect = 5.300e-36
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELS  LAVLASAS  SREREEFLR VNKEI++Y++ V+KEG DGE +++KA
Sbjct: 579 ALEKQEQLCELSHALAVLASASSVSREREEFLRLVNKEIELYHSIVDKEGMDGEKNAIKA 638

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAREE++ A+EV  GDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRWQLLD
Sbjct: 639 YRAAREETENASEVAEGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWQLLD 692
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP84_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059020 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.900e-39
Identity = 91/112 (81.25%), Postives = 98/112 (87.50%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           +KQ+QLCELSR LAVLAS S  SREREEFLR VNKEID+YNT VEKEGTDGEAD+LKAYK
Sbjct: 580 KKQEQLCELSRALAVLASTSSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEADALKAYK 639

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AAREESD AAEV + D+ S AL+ RVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 640 AAREESDHAAEVAIEDKASPALIARVDAMLQKLEKEIDDVDAKIGDRWQLLD 691
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: D7T2J4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g01070 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.000e-38
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELSR LAVLASAS  SREREEFLR VNKEI++YN+ VEKEGTDGE ++++A
Sbjct: 585 AVEKQEQLCELSRALAVLASASSVSREREEFLRLVNKEIELYNSMVEKEGTDGEKEAMEA 644

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAR+ESD AA+V VGDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRW+LLD
Sbjct: 645 YRAARDESDHAAKVAVGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWRLLD 698
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTH6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036940 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.400e-38
Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 1 

		  

Query: 6   RAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEAD 65
           R K++AE++    +++R LAVLASAS  SREREEFLR VNKEID+YNT VEKEGTDGEAD
Sbjct: 546 RTKDSAEEEG---DVARALAVLASASSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEAD 605

Query: 66  SLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           +LKAYKAAREESD AAEV VGD+VSSAL+DRVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 606 ALKAYKAAREESDHAAEVAVGDKVSSALIDRVDAMLQKLEKEIDDVDAKIGDRWQLLD 660
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: M0SN54_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-36
Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1 

		  

Query: 4   EFRAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGE 63
           E  + +  EKQ+QLC++SR LAVLASAS  SRER+EFL  VNKEI++YNT +EKEGTDGE
Sbjct: 575 ELASGKTLEKQEQLCKISRALAVLASASSVSRERQEFLSLVNKEIELYNTMLEKEGTDGE 634

Query: 64  ADSLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 123
            ++ KAY+AARE+SDQAAEV   D+VSSALVDRVD MLQ+LEKEIDDVDAKI DRW++LD
Sbjct: 635 EEAKKAYRAAREKSDQAAEVAAADKVSSALVDRVDAMLQELEKEIDDVDAKIGDRWKILD 694
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: W9RFE0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020366 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-36
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELS  LAVLASAS  SREREEFLR VNKEI++Y++ V+KEG DGE +++KA
Sbjct: 579 ALEKQEQLCELSHALAVLASASSVSREREEFLRLVNKEIELYHSIVDKEGMDGEKNAIKA 638

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAREE++ A+EV  GDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRWQLLD
Sbjct: 639 YRAAREETENASEVAEGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWQLLD 692
[Close]
BLAST of Spo24886.1 vs. TAIR (Arabidopsis)
Match: AT1G65540.1 (LETM1-like protein)

HSP 1 Score: 141.4 bits (355), Expect = 4.000e-34
Identity = 76/112 (67.86%), Postives = 92/112 (82.14%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           EK +QLCELSR LAVLASAS  S EREEFL+ V KE+D+YN+ VEK GTD E D+ KAY 
Sbjct: 555 EKHEQLCELSRALAVLASASSVSMEREEFLKLVKKEVDLYNSMVEKGGTDDEEDARKAYL 614

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AARE+SD++A+  + D+ SSAL+DRV+ MLQKLEKEIDDVD KI +RW+LLD
Sbjct: 615 AAREDSDRSAQKAIADKTSSALLDRVETMLQKLEKEIDDVDNKIGNRWRLLD 666
[Close]
BLAST of Spo24886.1 vs. TAIR (Arabidopsis)
Match: AT3G59820.2 (LETM1-like protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.200e-30
Identity = 72/112 (64.29%), Postives = 85/112 (75.89%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           E+Q  LC+LSR L VLASAS   REREEFLR V KE++ YNT VE+E  DGE  ++KAYK
Sbjct: 576 EQQDDLCKLSRALGVLASASSVCREREEFLRLVKKEVEFYNTMVEREDVDGEKAAMKAYK 635

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AAR + DQA EV   DEVSSAL+++VD ++Q LEKEIDDVD KI   WQLLD
Sbjct: 636 AARVDIDQADEVAEADEVSSALMEKVDGLIQNLEKEIDDVDIKIGKGWQLLD 687
The following BLAST results are available for this feature:
BLAST of Spo24886.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731323538|ref|XP_010672485.1|1.1e-3881.2PREDICTED: LETM1 and EF-hand d... [more]
gi|225434179|ref|XP_002275474.1|1.5e-3878.0PREDICTED: LETM1 and EF-hand d... [more]
gi|902231057|gb|KNA22102.1|1.9e-3878.8hypothetical protein SOVF_0369... [more]
gi|719985460|ref|XP_010251395.1|6.2e-3776.3PREDICTED: LETM1 and EF-hand d... [more]
gi|703117317|ref|XP_010101351.1|5.3e-3674.5hypothetical protein L484_0203... [more]
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BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8CP84_BETVU7.9e-3981.2Uncharacterized protein OS=Bet... [more]
D7T2J4_VITVI1.0e-3878.0Putative uncharacterized prote... [more]
A0A0K9RTH6_SPIOL1.4e-3878.8Uncharacterized protein OS=Spi... [more]
M0SN54_MUSAM3.7e-3670.8Uncharacterized protein OS=Mus... [more]
W9RFE0_9ROSA3.7e-3674.5Uncharacterized protein OS=Mor... [more]
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BLAST of Spo24886.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24886.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G65540.14.0e-3467.8LETM1-like protein[more]
AT3G59820.21.2e-3064.2LETM1-like protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 94..114
scor
NoneNo IPR availablePANTHERPTHR14009LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEINcoord: 10..123
score: 2.7
NoneNo IPR availablePANTHERPTHR14009:SF12LETM1-LIKE PROTEINcoord: 10..123
score: 2.7

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005509 calcium ion binding