Spo24902.1 (mRNA)

Overview
NameSpo24902.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionU11/U12 small nuclear ribonucleoprotein 25 kDa-like protein
LocationSpoScf_06233 : 3884 .. 4406 (+)
Sequence length429
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGGTATTTTCTCTCTCTTCTTTCTCTCAAGCATTTTCACAAACAGTTGGTGTGCATTTTCATTTTTTACGAGCTTTTTGCTGTCTCATTTTTCTAGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACATATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTTATTGTATAG

mRNA sequence

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACATATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTTATTGTATAG

Coding sequence (CDS)

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACATATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTTATTGTATAG

Protein sequence

MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSLSCFLDFLFGVFFVIV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo24902Spo24902gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo24902.1Spo24902.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24902.1.exon.1Spo24902.1.exon.1exon
Spo24902.1.exon.2Spo24902.1.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo24902.1.CDS.1Spo24902.1.CDS.1CDS
Spo24902.1.CDS.2Spo24902.1.CDS.2CDS


Homology
BLAST of Spo24902.1 vs. NCBI nr
Match: gi|902143828|gb|KNA04876.1| (hypothetical protein SOVF_195630 [Spinacia oleracea])

HSP 1 Score: 269.2 bits (687), Expect = 4.000e-69
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1

		  

Query: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60
           MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL
Sbjct: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60

Query: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRH 120
           SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQS MGHRH
Sbjct: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120

Query: 121 ISWYYSLSCFLDFLFGVFFVIV 143
           ISWYYSLSCFLDFLFGVFFVIV
Sbjct: 121 ISWYYSLSCFLDFLFGVFFVIV 142

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|976920429|gb|KVI05156.1| (hypothetical protein Ccrd_016473 [Cynara cardunculus var. scolymus])

HSP 1 Score: 163.3 bits (412), Expect = 3.100e-37
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1

		  

Query: 28  YCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSF 87
           Y S N K+AKLNSTLAALLDDP+L+DVPKKP+LSDVDTLISLELGSAMR+SVLKLD+TSF
Sbjct: 36  YNSNNVKKAKLNSTLAALLDDPVLADVPKKPTLSDVDTLISLELGSAMRVSVLKLDNTSF 95

Query: 88  DVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSL 128
           DV +MNSATVKDLKL IKKK+ EMEQS MGHRHISW+  L
Sbjct: 96  DVALMNSATVKDLKLAIKKKINEMEQSKMGHRHISWFVPL 135

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|731361663|ref|XP_010692484.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 163.3 bits (412), Expect = 3.100e-37
Identity = 94/127 (74.02%), Postives = 100/127 (78.74%), Query Frame = 1

		  

Query: 1   MEWSEKNEGSTPGGRG----GEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPK 60
           MEWSEK E S          GEG GG     Y +EN KRA+LNSTL+ALLDDPIL+DVPK
Sbjct: 1   MEWSEKKEDSASASASSSWVGEGLGG-----YNNENVKRARLNSTLSALLDDPILADVPK 60

Query: 61  KPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHM 120
           KPSLSDVDTLIS ELGSAMRIS+LKLDSTSFDVVVMNS TVKDLKL I KKV +MEQS M
Sbjct: 61  KPSLSDVDTLISFELGSAMRISILKLDSTSFDVVVMNSDTVKDLKLAIIKKVNQMEQSQM 120

Query: 121 GHRHISW 124
           GHR ISW
Sbjct: 121 GHRQISW 122

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|590594717|ref|XP_007017930.1| (Ubiquitin-like superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 158.7 bits (400), Expect = 7.600e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1

		  

Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 172 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 231

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 232 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 269

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|590594714|ref|XP_007017929.1| (Ubiquitin-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 158.7 bits (400), Expect = 7.600e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1

		  

Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 234 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 293

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 294 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 331

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195630 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.800e-69
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1

		  

Query: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60
           MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL
Sbjct: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60

Query: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRH 120
           SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQS MGHRH
Sbjct: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120

Query: 121 ISWYYSLSCFLDFLFGVFFVIV 143
           ISWYYSLSCFLDFLFGVFFVIV
Sbjct: 121 ISWYYSLSCFLDFLFGVFFVIV 142

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A103Y9T9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016473 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.100e-37
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1

		  

Query: 28  YCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSF 87
           Y S N K+AKLNSTLAALLDDP+L+DVPKKP+LSDVDTLISLELGSAMR+SVLKLD+TSF
Sbjct: 36  YNSNNVKKAKLNSTLAALLDDPVLADVPKKPTLSDVDTLISLELGSAMRVSVLKLDNTSF 95

Query: 88  DVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSL 128
           DV +MNSATVKDLKL IKKK+ EMEQS MGHRHISW+  L
Sbjct: 96  DVALMNSATVKDLKLAIKKKINEMEQSKMGHRHISWFVPL 135

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020500 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.100e-37
Identity = 94/127 (74.02%), Postives = 100/127 (78.74%), Query Frame = 1

		  

Query: 1   MEWSEKNEGSTPGGRG----GEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPK 60
           MEWSEK E S          GEG GG     Y +EN KRA+LNSTL+ALLDDPIL+DVPK
Sbjct: 1   MEWSEKKEDSASASASSSWVGEGLGG-----YNNENVKRARLNSTLSALLDDPILADVPK 60

Query: 61  KPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHM 120
           KPSLSDVDTLIS ELGSAMRIS+LKLDSTSFDVVVMNS TVKDLKL I KKV +MEQS M
Sbjct: 61  KPSLSDVDTLISFELGSAMRISILKLDSTSFDVVVMNSDTVKDLKLAIIKKVNQMEQSQM 120

Query: 121 GHRHISW 124
           GHR ISW
Sbjct: 121 GHRQISW 122

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A061FCZ7_THECC (Ubiquitin-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_034316 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.300e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1

		  

Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 172 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 231

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 232 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 269

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A061FL17_THECC (Ubiquitin-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034316 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.300e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1

		  

Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 234 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 293

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 294 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 331

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: U1125_ARATH (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.800e-29
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 1

		  

Query: 34  KRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMN 93
           KR KL S L+ LL DPIL+DVP+ P+LSDV TL+SLE GSAMR+SV+KLD +S DV VMN
Sbjct: 11  KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMN 70

Query: 94  SATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSLSCF 131
           SAT+KDLKL IKKKV EMEQ++MGHRHISW +  S F
Sbjct: 71  SATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNF 107

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: SNR25_HUMAN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.200e-10
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 1

		  

Query: 42  LAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLK 101
           LA ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ SATV DLK
Sbjct: 8   LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLK 67

Query: 102 LCIKKKVTEMEQSHMGHRHISWYY 126
             I++ V   ++   G +HISW Y
Sbjct: 68  KAIQRYVQLKQEREGGIQHISWSY 91

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: SNR25_MOUSE (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.600e-9
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 1

		  

Query: 45  LLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCI 104
           ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ +ATV DLK  I
Sbjct: 2   VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61

Query: 105 KKKVTEMEQSHMGHRHISWYY 126
           ++ V   ++   G +HISW Y
Sbjct: 62  QRYVQLKQEREGGVQHISWSY 82

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: SNR25_BOVIN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.600e-9
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 1

		  

Query: 45  LLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCI 104
           ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ +ATV DLK  I
Sbjct: 2   VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61

Query: 105 KKKVTEMEQSHMGHRHISWYY 126
           ++ V   ++   G +HISW Y
Sbjct: 62  QRYVQLRQEREGGIQHISWSY 82

BLAST of Spo24902.1 vs. TAIR (Arabidopsis)
Match: AT3G07860.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.000e-30
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 1

		  

Query: 34  KRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMN 93
           KR KL S L+ LL DPIL+DVP+ P+LSDV TL+SLE GSAMR+SV+KLD +S DV VMN
Sbjct: 11  KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMN 70

Query: 94  SATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSLSCF 131
           SAT+KDLKL IKKKV EMEQ++MGHRHISW +  S F
Sbjct: 71  SATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNF 107

The following BLAST results are available for this feature:
BLAST of Spo24902.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902143828|gb|KNA04876.1|4.0e-6999.3hypothetical protein SOVF_1956... [more]
gi|976920429|gb|KVI05156.1|3.1e-3782.0hypothetical protein Ccrd_0164... [more]
gi|731361663|ref|XP_010692484.1|3.1e-3774.0PREDICTED: U11/U12 small nucle... [more]
gi|590594717|ref|XP_007017930.1|7.6e-3682.6Ubiquitin-like superfamily pro... [more]
gi|590594714|ref|XP_007017929.1|7.6e-3682.6Ubiquitin-like superfamily pro... [more]
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BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QEA8_SPIOL2.8e-6999.3Uncharacterized protein OS=Spi... [more]
A0A103Y9T9_CYNCS2.1e-3782.0Uncharacterized protein OS=Cyn... [more]
A0A0J8BI80_BETVU2.1e-3774.0Uncharacterized protein OS=Bet... [more]
A0A061FCZ7_THECC5.3e-3682.6Ubiquitin-like superfamily pro... [more]
A0A061FL17_THECC5.3e-3682.6Ubiquitin-like superfamily pro... [more]
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BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
U1125_ARATH1.8e-2970.1U11/U12 small nuclear ribonucl... [more]
SNR25_HUMAN3.2e-1042.8U11/U12 small nuclear ribonucl... [more]
SNR25_MOUSE4.6e-940.7U11/U12 small nuclear ribonucl... [more]
SNR25_BOVIN4.6e-940.7U11/U12 small nuclear ribonucl... [more]
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BLAST of Spo24902.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G07860.11.0e-3070.1Ubiquitin-like superfamily pro... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 69..125
score: 2.1
NoneNo IPR availablePANTHERPTHR14942FAMILY NOT NAMEDcoord: 28..125
score: 7.5

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006626 protein targeting to mitochondrion