Spo24902.1 (mRNA) | SpinachBase

Overview


Name	Spo24902.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	U11/U12 small nuclear ribonucleoprotein 25 kDa-like protein
Location	SpoScf_06233 : 3884 .. 4406 (+)
Sequence length	429

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGGTATTTTCTCTCTCTTCTTTCTCTCAAGCATTTTCACAAACAGTTGGTGTGCATTTTCATTTTTTACGAGCTTTTTGCTGTCTCATTTTTCTAGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACATATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTTATTGTATAG

mRNA sequence

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACATATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTTATTGTATAG

Coding sequence (CDS)

ATGGAATGGAGTGAGAAGAACGAGGGCTCAACTCCGGGCGGCAGAGGCGGAGAAGGTGGTGGTGGAGGCGGAGGCGTAGTATACTGCAGTGAGAACGCGAAAAGGGCAAAGCTGAATTCAACGTTAGCCGCATTACTAGATGACCCCATTCTCTCAGATGTCCCAAAGAAGCCATCTTTATCCGATGTCGACACCCTTATCAGCTTAGAGCTCGGAAGTGCCATGCGTATCTCTGTACTCAAGCTCGACTCCACCTCCTTTGATGTTGTGGTCATGAATTCGGCTACGGTGAAGGATTTGAAACTGTGTATTAAGAAGAAAGTTACTGAAATGGAACAATCACATATGGGTCATCGTCATATTTCTTGGTACTACTCTCTTTCTTGTTTCTTAGACTTTCTCTTTGGAGTATTTTTCGTTATTGTATAG

Protein sequence

MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSLSCFLDFLFGVFFVIV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24902	Spo24902	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24902.1	Spo24902.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24902.1.exon.1	Spo24902.1.exon.1	exon
Spo24902.1.exon.2	Spo24902.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24902.1.CDS.1	Spo24902.1.CDS.1	CDS
Spo24902.1.CDS.2	Spo24902.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|902143828|gb|KNA04876.1| (hypothetical protein SOVF_195630 [Spinacia oleracea])

HSP 1 Score: 269.2 bits (687), Expect = 4.000e-69
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60
           MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL
Sbjct: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60

Query: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRH 120
           SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQS MGHRH
Sbjct: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120

Query: 121 ISWYYSLSCFLDFLFGVFFVIV 143
           ISWYYSLSCFLDFLFGVFFVIV
Sbjct: 121 ISWYYSLSCFLDFLFGVFFVIV 142

[Close]

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|976920429|gb|KVI05156.1| (hypothetical protein Ccrd_016473 [Cynara cardunculus var. scolymus])

HSP 1 Score: 163.3 bits (412), Expect = 3.100e-37
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1


		  
Query: 28  YCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSF 87
           Y S N K+AKLNSTLAALLDDP+L+DVPKKP+LSDVDTLISLELGSAMR+SVLKLD+TSF
Sbjct: 36  YNSNNVKKAKLNSTLAALLDDPVLADVPKKPTLSDVDTLISLELGSAMRVSVLKLDNTSF 95

Query: 88  DVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSL 128
           DV +MNSATVKDLKL IKKK+ EMEQS MGHRHISW+  L
Sbjct: 96  DVALMNSATVKDLKLAIKKKINEMEQSKMGHRHISWFVPL 135

[Close]

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|731361663|ref|XP_010692484.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 163.3 bits (412), Expect = 3.100e-37
Identity = 94/127 (74.02%), Postives = 100/127 (78.74%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRG----GEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPK 60
           MEWSEK E S          GEG GG     Y +EN KRA+LNSTL+ALLDDPIL+DVPK
Sbjct: 1   MEWSEKKEDSASASASSSWVGEGLGG-----YNNENVKRARLNSTLSALLDDPILADVPK 60

Query: 61  KPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHM 120
           KPSLSDVDTLIS ELGSAMRIS+LKLDSTSFDVVVMNS TVKDLKL I KKV +MEQS M
Sbjct: 61  KPSLSDVDTLISFELGSAMRISILKLDSTSFDVVVMNSDTVKDLKLAIIKKVNQMEQSQM 120

Query: 121 GHRHISW 124
           GHR ISW
Sbjct: 121 GHRQISW 122

[Close]

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|590594717|ref|XP_007017930.1| (Ubiquitin-like superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 158.7 bits (400), Expect = 7.600e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 172 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 231

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 232 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 269

[Close]

BLAST of Spo24902.1 vs. NCBI nr
Match: gi|590594714|ref|XP_007017929.1| (Ubiquitin-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 158.7 bits (400), Expect = 7.600e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 234 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 293

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 294 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 331

[Close]

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_195630 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.800e-69
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60
           MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL
Sbjct: 1   MEWSEKNEGSTPGGRGGEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSL 60

Query: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRH 120
           SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQS MGHRH
Sbjct: 61  SDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSQMGHRH 120

Query: 121 ISWYYSLSCFLDFLFGVFFVIV 143
           ISWYYSLSCFLDFLFGVFFVIV
Sbjct: 121 ISWYYSLSCFLDFLFGVFFVIV 142

[Close]

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A103Y9T9_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016473 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.100e-37
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1


		  
Query: 28  YCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSF 87
           Y S N K+AKLNSTLAALLDDP+L+DVPKKP+LSDVDTLISLELGSAMR+SVLKLD+TSF
Sbjct: 36  YNSNNVKKAKLNSTLAALLDDPVLADVPKKPTLSDVDTLISLELGSAMRVSVLKLDNTSF 95

Query: 88  DVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSL 128
           DV +MNSATVKDLKL IKKK+ EMEQS MGHRHISW+  L
Sbjct: 96  DVALMNSATVKDLKLAIKKKINEMEQSKMGHRHISWFVPL 135

[Close]

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BI80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020500 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.100e-37
Identity = 94/127 (74.02%), Postives = 100/127 (78.74%), Query Frame = 1


		  
Query: 1   MEWSEKNEGSTPGGRG----GEGGGGGGGVVYCSENAKRAKLNSTLAALLDDPILSDVPK 60
           MEWSEK E S          GEG GG     Y +EN KRA+LNSTL+ALLDDPIL+DVPK
Sbjct: 1   MEWSEKKEDSASASASSSWVGEGLGG-----YNNENVKRARLNSTLSALLDDPILADVPK 60

Query: 61  KPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCIKKKVTEMEQSHM 120
           KPSLSDVDTLIS ELGSAMRIS+LKLDSTSFDVVVMNS TVKDLKL I KKV +MEQS M
Sbjct: 61  KPSLSDVDTLISFELGSAMRISILKLDSTSFDVVVMNSDTVKDLKLAIIKKVNQMEQSQM 120

Query: 121 GHRHISW 124
           GHR ISW
Sbjct: 121 GHRQISW 122

[Close]

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A061FCZ7_THECC (Ubiquitin-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_034316 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.300e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 172 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 231

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 232 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 269

[Close]

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Match: A0A061FL17_THECC (Ubiquitin-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034316 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.300e-36
Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1


		  
Query: 26  VVYCSENAKRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDST 85
           V Y + N K+AKL+STLAALLDDPIL+DVPKKP+LSDVDTLISLELGSAMRIS+LKLD T
Sbjct: 234 VGYNNNNVKKAKLHSTLAALLDDPILADVPKKPTLSDVDTLISLELGSAMRISILKLDGT 293

Query: 86  SFDVVVMNSATVKDLKLCIKKKVTEMEQSHMGHRHISW 124
           SFD+ VMNSATVKDLKL IKKKV E EQS MGHRHISW
Sbjct: 294 SFDIAVMNSATVKDLKLAIKKKVIEFEQSKMGHRHISW 331

[Close]

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: U1125_ARATH (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.800e-29
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 1


		  
Query: 34  KRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMN 93
           KR KL S L+ LL DPIL+DVP+ P+LSDV TL+SLE GSAMR+SV+KLD +S DV VMN
Sbjct: 11  KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMN 70

Query: 94  SATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSLSCF 131
           SAT+KDLKL IKKKV EMEQ++MGHRHISW +  S F
Sbjct: 71  SATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNF 107

[Close]

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: SNR25_HUMAN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.200e-10
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 1


		  
Query: 42  LAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLK 101
           LA ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ SATV DLK
Sbjct: 8   LAMVVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQSATVLDLK 67

Query: 102 LCIKKKVTEMEQSHMGHRHISWYY 126
             I++ V   ++   G +HISW Y
Sbjct: 68  KAIQRYVQLKQEREGGIQHISWSY 91

[Close]

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: SNR25_MOUSE (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.600e-9
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 1


		  
Query: 45  LLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCI 104
           ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ +ATV DLK  I
Sbjct: 2   VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61

Query: 105 KKKVTEMEQSHMGHRHISWYY 126
           ++ V   ++   G +HISW Y
Sbjct: 62  QRYVQLKQEREGGVQHISWSY 82

[Close]

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Match: SNR25_BOVIN (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 4.600e-9
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 1


		  
Query: 45  LLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMNSATVKDLKLCI 104
           ++ DP+L D+P + +L +V++ I+LE G AM + V K+D     VVV+ +ATV DLK  I
Sbjct: 2   VVQDPLLCDLPIQVTLEEVNSQIALEYGQAMTVRVCKMDGEVMPVVVVQNATVLDLKKAI 61

Query: 105 KKKVTEMEQSHMGHRHISWYY 126
           ++ V   ++   G +HISW Y
Sbjct: 62  QRYVQLRQEREGGIQHISWSY 82

[Close]

BLAST of Spo24902.1 vs. TAIR (Arabidopsis)
Match: AT3G07860.1 (Ubiquitin-like superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.000e-30
Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = 1


		  
Query: 34  KRAKLNSTLAALLDDPILSDVPKKPSLSDVDTLISLELGSAMRISVLKLDSTSFDVVVMN 93
           KR KL S L+ LL DPIL+DVP+ P+LSDV TL+SLE GSAMR+SV+KLD +S DV VMN
Sbjct: 11  KREKLKSVLSQLLADPILADVPRNPTLSDVVTLVSLEKGSAMRLSVVKLDGSSLDVAVMN 70

Query: 94  SATVKDLKLCIKKKVTEMEQSHMGHRHISWYYSLSCF 131
           SAT+KDLKL IKKKV EMEQ++MGHRHISW +  S F
Sbjct: 71  SATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWSNF 107

The following BLAST results are available for this feature:

BLAST of Spo24902.1 vs. NCBI nr
BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
BLAST of Spo24902.1 vs. TAIR (Arabidopsis)

BLAST of Spo24902.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902143828\|gb\|KNA04876.1\|	4.0e-69	99.3	hypothetical protein SOVF_1956...	[more]
gi\|976920429\|gb\|KVI05156.1\|	3.1e-37	82.0	hypothetical protein Ccrd_0164...	[more]
gi\|731361663\|ref\|XP_010692484.1\|	3.1e-37	74.0	PREDICTED: U11/U12 small nucle...	[more]
gi\|590594717\|ref\|XP_007017930.1\|	7.6e-36	82.6	Ubiquitin-like superfamily pro...	[more]
gi\|590594714\|ref\|XP_007017929.1\|	7.6e-36	82.6	Ubiquitin-like superfamily pro...	[more]

BLAST of Spo24902.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QEA8_SPIOL	2.8e-69	99.3	Uncharacterized protein OS=Spi...	[more]
A0A103Y9T9_CYNCS	2.1e-37	82.0	Uncharacterized protein OS=Cyn...	[more]
A0A0J8BI80_BETVU	2.1e-37	74.0	Uncharacterized protein OS=Bet...	[more]
A0A061FCZ7_THECC	5.3e-36	82.6	Ubiquitin-like superfamily pro...	[more]
A0A061FL17_THECC	5.3e-36	82.6	Ubiquitin-like superfamily pro...	[more]

BLAST of Spo24902.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4


Match Name	E-value	Identity	Description
U1125_ARATH	1.8e-29	70.1	U11/U12 small nuclear ribonucl...	[more]
SNR25_HUMAN	3.2e-10	42.8	U11/U12 small nuclear ribonucl...	[more]
SNR25_MOUSE	4.6e-9	40.7	U11/U12 small nuclear ribonucl...	[more]
SNR25_BOVIN	4.6e-9	40.7	U11/U12 small nuclear ribonucl...	[more]

BLAST of Spo24902.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G07860.1	1.0e-30	70.1	Ubiquitin-like superfamily pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 69..125 score: 2.1
None	No IPR available	PANTHER	PTHR14942	FAMILY NOT NAMED	coord: 28..125 score: 7.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006626	protein targeting to mitochondrion