Spo24948.1 (mRNA) | SpinachBase

Overview


Name	Spo24948.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Zinc finger CCCH domain-containing protein 67
Location	SpoScf_00774 : 123847 .. 131227 (+)
Sequence length	2537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATAAAAAAAGATGACGCAACAACAGTAAAACACTGCAACACAAGCCTTTGCTTCCTTCGCACACTATACACAGTGGGGGATCATGGTGGAGCTTGCTACCCAATCAGATTCTCTCTCTTTACATTTCTAATGGTCTCATTTTAATATTCTCATTTTTTTTCAACCCCCGTCAATTTCTTTTCAATTCCCCCATTTTCTAGGGTTTTGGACTTTTTTTTCTTCAACGAATCAAACCCTAGAATTCTCTGCTCTTTGTCCAATTTCTGGAAAATCACCCCGTCGATTTTTTCCGGGAAGAGTGACGTTTCTGACAACAATGTGGGTTATCAGCTCTGTTTTCGGTTGAATTTCGGAAATCAGGTATGAAACTGAGGAACTTTACCATGAATTTTTGTAGTAATTGAGTTTTTTTTCCTGGAAATTTTGAATTGTCCATGGATTGGAAGTGTTATCGTTTCTGCAAATTCTTAAAGTTAATGTCTAACTTTTTTTAAATCGAATTTTTCATAAAATTAATCAGATGTATTTAGTAAAAGTTGAATTTTAATCTCAAATTGAAATGTTTCAGTGATTGAATTTAATCCTTATCTCTAGTTTTTCTTTCAGATTATTCATTTTTCTATCTTTCTTTTTCCATTTTTGTTTACTTGGTGGAAGAGGAAATAGTTAGCTAAGCTTTTGCTGTACCTCATTTTTTTTTTAATTTAATTCAACTTTTTTGGTGTCTCCTTTGGAAGATGAAAATAAAATTAAAGTAGTAATAAAAGAAAAATAGAGAAAAGGCGGCACTTGGAAGAATCTCCACTGATGAATAAGTATTGCTTTTCTACATTTATTTTCACACCGAACCAGTGGCTATTAATATGGTACTATATAAAAATATTACTGCTTTTTTTTATTATTATTATTATATAACAAGGTACTGTCTTTCTTGCTCATTGATTTTCAGTGTTGTTGGGGTTTCTGTAAAAAAAAATTGAGAAAATAGAGGAGAGAGAAAACATGGGAACCTGTGAAGAAATCAGTTCATCTATTGAAACCCAGGATGAAATTAAGTTGGGGATTTCATCAAGTGGGACCCACTGTTGGGATGAACAACTTACGGAAGAGGAAGAAGCTCTTGCTCAACAGTTTGAGAGTGTAGTTTTGCAAGGCAATGGTGTTGATGTGAAGATTGAGGGTGGAGAAGAAGAAGAGGAGAAATTACATCTTTACCCTTTGAGGCCTTATGCTGTGGATTGCCCCTTTTATCTCAAGACGGGTACTTGCAAATTTGGACCAAACTGTAGATTTAATCACCCCCCTGAGAAGGGTTTTAAGGTATTTCGGATTTTGGATTTTTTTCCCCCGGGTTTTTGCTTATCAGGTTCTTTAGATGCTGATTTTTTCCTGTGTTTCTTAGATTGTTCTGGACCAGGAGGAAGGAATTGAGGTGAGCAATGGAGCATTTGTTGATCCTGGGAAGATTGATTGCAAGGTTGTTGCTTTTTATACATTTGTTTATGGATGCCTAGTGTAGTATTTTATTATCATGTGGGTTGTTTTATTCAATTAAAAAGATAATAATTTTGCTTTGACTTTGACCTTACTTACCATGTGTTCTTGATACCAGAAATATTCATGGTTTGTTTAAATATGCCTGTGTTTAGTCTTTGCAGATAATTATATGGCCTCTTATGATATGATAGTTGCATTATCAGATCAACTTCTGAGACTAAGTTAGCATTTTTCATACGATAACTTTTGGGCCCGCTATTTTTCTTAAAAATATCGATCCCAAGAAAATTGTGTAAAAGCGAACTTCTTTATGTGTCCGTTTTTGGGTAAGTAATAAGTTGAGATCTTATGTATTTATGTAATGTTTTACGCTATGCAAGTTGGGTTAAGTTATAATTTTGAGGAAAATGTTGTTGTTGTGTTGTTGTTTAGAGGGGATATTTCAAGACAGACTAATAAGAAGTTTTCAGAAATAGGCAATTATTTTAATTTAGCTCTTTGATGCTTGTTGGTTCAGTTCATTGATCGCTTGAGCTCTTGGTTGTGGTCTGCGCTCAATGAAATTGGTTTTATTTTTTCACTATAAAGACATTTTGTTCTCTATGCTAGTTTATATGTTTGATATAAGCCCTCAAAATTGCACCTCCAAGAGATATGCTTTATTTCTCCTGCATTCTTCATTTATCCTCTCTATACTTGGTCTATACCTATTTGACAAGGCTTGTATGTACTGGGTGTATACCTACTTTGTTGTGAACAACCAAGTATCAAAATCTCAAGTTTGTTGGGAAAAAGAAGTATTCTGATGGGGATTGCTGGCTTTTATACTTAGTTTGAGTATTATCTTTACCGTGCGAAGAAGCATGCTCAATGGAGAAAATGTGTAAAAGTATGTATCATTGAGGATTATGATGGTGCATATAAAATTTGTGTGGAACTGCAGATGACTGACTGTTTGGGTGTGCGAACAAAAAAGTATCAGCAACCTTGATAAATGTAATCAGGCGATAGTGTGTTGATGTGTAACATACTTCATGTGGACCAGATATTGTTTTAAATTATGAATTATATTTTTCCTAATCAGTACCTGCATGTTCCTTTTGTGGATGAGGAAACTGGTTTATCCTTTACTGCAGAAATACACAAACCTATAACAACTGTCATCCTAGATTTTATTTTCCTATGTCCAATTTTTCCAAAATGATATAGCATTATTTAAGTCTGCATAAGCAAATCTTGTGTTATGCTTGTTTCCTTAACTACCTCATCGTGTTGAAGGTTCTTTGCATTGCAGTATACAAAGTATTAAACACCCACACACATCACGTGGTCACCCTTCCTTGGGAAAGTGAGACGACTGTTGTTTCATACTTTCATCTAATGCAAGCTAATTCCTACGTGAATGTTACGATGTCAGCCTTGATTTTCTCTGTCGGGGTTCAGATTTCCCTAATCATATCGCATTAAGTAATGATGATTCGAGCAATTTATGTCATAAATTTATGTTTTTCTACATTTGAAATGATTTGGTGTCTTTCACTTACTGTTCTTCAGTATTTGTTTCACTGACATTTATTGTTGTGGTTTTGTTCTTTTAGTATTTCCGGACACCAGGAGGATGCAAATATGGAGATGGATGCAGATATAATCACTCTGCACAGAAAGTTGAGAGAGAAGGTCCAGAGCTTAACTTTCTAGGTTTACCAGTAAGACCGGTAAGACTATATCATTGTTTTTTTGATCTTACTTCGCTTCTTTTGTGTATCAATGTATATTTCTCTCTGACTTTTAATCAGATTGCACATGAACTGGGAAATTAATGGCTTTTTTCTCGTCTTATTTACCTTAGTCGGAGCAAGAGTGCACCTTTTACTTGCGTACCGGCTCCTGTGGCTATGGAATTAATTGCAGGTTCCACCATCCTGATCCTACTGCTATGAAAGAACCTGAATCCAAAAACTCATTAGCTAATGGTGTGTATGCAAGAGGTGGCAACAATTTTCCTGGAATGTTTGTTGGTGAGCCATTGCAGTCCTCTGGAGTATCACGGGGTATTCCAGACTTGGCAAATGGCCTAAGTTCGATGAATGGTTTACCTTATGCTGGGATCAACACTTATCACCAATCAATGCCCCAAAATGCTGGTTGGAACCAAGATCAGGTACATTCATCTTGACCTTTCTCATGTATGTTTGGCATGTGAGTTGTAGTAAGAAAAAAAAATCCTCCTTCTACTTCTCTCTGAAAGTGTGGTGATATCTTTATTCTGTATATTTTTACATTCCGTGGTAAGTAATCCAGCAATTTTGTATACAAAACAGTCGTGCAAACTGCTGAGAGTTCATACATTGGATTTTCTTAACTACAGTTTTCCTCTCACCTGTTGTCAAGCCCCCATTCTTGTGTAGAGAAGAGGATACATGGATGGATAGTTCACAATATCTTTATAATCAGAATTTCAATAGATAGTGCTTAGAGCCTTAGGGATTTAGAGCCTACTTGTTTATGTCCTATTCTAATGGGTTCAACGGATCTTTGATTTGATAACGTTATGGACTAAATGTAATGTGAGACATTAAATTTCTTGCTTATTTATTTTGAAATAAATGCTCTGAGCCTATGTGCATTTCTAACGGAGTAACATACACAATTCCTTGACTTTAGGAGTATTGTGGACTTGATTAAAGTGGTTAAAATAATTCTGTTCCTTCTCTTACTAATTCTGAAATATTAGGCATTTTGGAATGTATTGGGTTAAGGGAAGTCGGAAAATCTTCTCTATTATAGCAGGGGGTGAGCTGCATACATGATACATTGATCCCCCTTACACCGTTTAAAGTGGGAGCCTTGATAGAGGCGTTCGCGGTGATGTTGATATTGAAGACTTTGAAGTTGACTTTGGCTTAAACTAAGTTTGAATAGATTCATATAACTTTTTGTTCTTATGGTCACCTCATTGTTCACCTAATTCCTACAGGAAAGTAGACTCAAGTGTCAAGATTTTTTGCTTTCCTTTTGGTTTTTACTCAACCACAGACGCATCAGTTTACTGTGCAGTTCTCTAATTTGTTGTAAAAATGGTTATTGTGTGTTGATTTTTTTTTATTCAACACCCGTCAAAAAGAAAGTAATTTTTTCAGAACTTTTGCAAGCATTAGCTTGCTTCACTTCACCTGAACTTGCTGTGAATTTATACACCCTTATTTAAAAAAGAATCATTGTCTCTTCATTGGACTGATTGGTCCATGTATGAATTGAGCTTAGGAGCATGTGTCTTAAGTTCAGACTCTGAACTTAACTGGCTTTGACCCGTTGTGCCCTTGTATGCATTAATTTGCGTTAGTCTAAACCTACCTGAACTTGTTGGCCTTTATCTGAACATATGTTTCTGAAACTAATTTTTGCAATGTGAAGAAAAGAAAGCATCACTGCCCTAGTGTCCTACGATTTTATGGAACTTCTGTGAAAGAGGAAGATTCTTCTTTTTTTTCCTAACATTTGTGTTTTTCTTCAAAGATATTCGTAATTATGGGCCCCAGCACATCCTGCCAATCTCAGAGTCAGATTGCGTGGAACGAAGGCTCCCTTATCCCAAAACCTTGATTGGCTAAGGCCTATCAGTTATCACCCCCACATGCCACAACCGCAAAGTAATGTGAAGTGTGGGTTTTTAACTCCCGAGCCCCATCCCTCTGGAATATGGTTGCTTTTCTGTAGTACCGTGTATATACGTCTTTGTGTTTTTTCCCCAGGTTCATGTGTGTGTGTGTCTTTTATGATACTCAGTTTCCTGTAGAACATCATTTACCTTGTAGGCGCAAGAGCTTCAAATATTGAGCTTTTGGTGGAATTTCTGGGAATCTCTTTATAAACACCAGATTACTGTATTTCCTCTGTCTTTTTTGGTGTTTTTGAAGCTGAAACTCTTCATAATTTTGGCTTGCATCTTGTTTTAATGCATTTACTTTTTATCCTGTCTAAGGAGTGACAAATGTTTTAATTAGGAAAATTAGCGTTTCATTATTTTCTTTGAACTTTTATTTTTGCTCAGGTCAACCTTTCTATGTCAGCAAAAAAGACACCTCTTCCACATCAAATTGTAAACTTTTCAAAGAAAACTGATCCTACAACACATTATGAACAAGTAATGCAGTCGGAAGAGTTTCCTGTACGACCTGGGCAACCTGATTGTGATTATTTCATGAAAACTGGAGACTGCAAATACAGATCTGCTTGCAGGTATAACCATCCAGTAAGTCGAGACTCTAAGCTGCGTCTGCCGCTGCTTTCCTCCAAACGCCCCTATTCCAAATCTGTATGTCTACTATACTGATTCTTTCTGCATTGCTTGAACTTACTACTGTGACTCCCATTGCTTTTATTTTTTACCATTATGTTTTGCTTAAAATAAAATGATTTTACTTGGTTTCCATAGAAAAATCCCGAGCTTCCTGATTCATTTGCCGGCAATCCAAGGAAAAGTGGAGCATCGTCTCATCAACAGCAGCAACTGCAGAATGAACAGTACCCAGAACGGCCTGGACAACCAGAGTGCGAATTCTTCATGAAAACTGGCAATTGTAAATTTAAATCTGCATGTAGATACCACCATCCGAGGGACCGAATTTCTACATCTTCACCAAGTTCTCTCAATGAATCGGGACTTCCTCTAAGACCTGTATGTTCCCTTTTTTAAACAATTTTATAATTCCTAAATACTTGCAACAAGTTGATTAACACTATTGCCAATGCACATGTTTGAACACAAATGACTAATCCAACAGCGTATTACAAAATAACATTTGAATTTTATATGTTAGTAAGAAATGAGGTCAAACTTAATGTATAATGTGCAAACGTCAAATTGTTGCAAATATTTATAAACGGGGGAGTAAAAATCTCGCTAAGTGGGGCCGTATGTGACAGTTTCTTATGTTGTAATGGGACTCAAGTATTATTGTGCGCAGAGAGATCTTTTCCAAAAGAGTCACTTCCATCATATTGTGATGAAATAAATGTCCTTGTTTTGTTTATGTTTTCTACTAAATGTGATAAAACTGATTATTGTTCCAACTGTTGCATTGACCAGGGTAGCAAAATCTGCCGGAACTATGAGCTACAAGGTACATGCAAATATGGTCGAAATTGTCTGTTTCATCATCCTGATATCAGCTCATCAAAAAGTTCAGTTGTTCCACCTGCTCCTGTTGCTGATCAAGATCACAGTTCATCTAATGTTGTAGTCGCCACGGATTTGGAATTTTCTGCTGGCAATGTGGACTCAGATTGGGGTGATGGCTGGGCAATGTAACTTGTTCCTATGAGCGAATTTGGTTTTTTGGCAACATTGCTGGCATCATTGTCAAGAAAAAGGAATGCCGTCTTCAGTTTTTGCAAGTTGCAACTTTTGGTGGTTGTCAACTCGAGGAATTTGATAACTTTTGGTGGTTGCTAAATGCATACCCCTTATCTTTCACAAAACAATTTATTTATCAATACTAATCCTATCTATACATAAACTGTTGATCCATGTTATTTGCCTGTGGAATTTGCTGAAACAGAGAATAGAAGTGAAAATTACTTCTGATTACTCTTTTCAACTTCATCTTTTGAGTTTTGTCATCCATCACTGTTTTGTAGTGGTGCATATTTGATGGATTATTGATAGTGGTAAGTTGTGAGAAATGCAATAGGTAGAATAGAAAGGAATTTGCTTGACTTAACGATCTTCATTTGTATGTAGATTTGATAGGTAGAACCGTAGAATGGATTCTCCAATGAGTCATTCTTCGGTCCGAAAATCCTCGTTTTTTCAGCATGAAATATAACAAGGCCTTGTTCAGTTAGCAGATGAACAATACAAATGAAAGTTAATTGTTAT

mRNA sequence

CCCATAAAAAAAGATGACGCAACAACAGTAAAACACTGCAACACAAGCCTTTGCTTCCTTCGCACACTATACACAGTGGGGGATCATGGTGGAGCTTGCTACCCAATCAGATTCTCTCTCTTTACATTTCTAATGGTCTCATTTTAATATTCTCATTTTTTTTCAACCCCCGTCAATTTCTTTTCAATTCCCCCATTTTCTAGGGTTTTGGACTTTTTTTTCTTCAACGAATCAAACCCTAGAATTCTCTGCTCTTTGTCCAATTTCTGGAAAATCACCCCGTCGATTTTTTCCGGGAAGAGTGACGTTTCTGACAACAATGTGGGTTATCAGCTCTGTTTTCGGTTGAATTTCGGAAATCAGTGTTGTTGGGGTTTCTGTAAAAAAAAATTGAGAAAATAGAGGAGAGAGAAAACATGGGAACCTGTGAAGAAATCAGTTCATCTATTGAAACCCAGGATGAAATTAAGTTGGGGATTTCATCAAGTGGGACCCACTGTTGGGATGAACAACTTACGGAAGAGGAAGAAGCTCTTGCTCAACAGTTTGAGAGTGTAGTTTTGCAAGGCAATGGTGTTGATGTGAAGATTGAGGGTGGAGAAGAAGAAGAGGAGAAATTACATCTTTACCCTTTGAGGCCTTATGCTGTGGATTGCCCCTTTTATCTCAAGACGGGTACTTGCAAATTTGGACCAAACTGTAGATTTAATCACCCCCCTGAGAAGGGTTTTAAGATTGTTCTGGACCAGGAGGAAGGAATTGAGGTGAGCAATGGAGCATTTGTTGATCCTGGGAAGATTGATTGCAAGTATTTCCGGACACCAGGAGGATGCAAATATGGAGATGGATGCAGATATAATCACTCTGCACAGAAAGTTGAGAGAGAAGGTCCAGAGCTTAACTTTCTAGGTTTACCAGTAAGACCGTCGGAGCAAGAGTGCACCTTTTACTTGCGTACCGGCTCCTGTGGCTATGGAATTAATTGCAGGTTCCACCATCCTGATCCTACTGCTATGAAAGAACCTGAATCCAAAAACTCATTAGCTAATGGTGTGTATGCAAGAGGTGGCAACAATTTTCCTGGAATGTTTGTTGGTGAGCCATTGCAGTCCTCTGGAGTATCACGGGGTATTCCAGACTTGGCAAATGGCCTAAGTTCGATGAATGGTTTACCTTATGCTGGGATCAACACTTATCACCAATCAATGCCCCAAAATGCTGGTTGGAACCAAGATCAGGTCAACCTTTCTATGTCAGCAAAAAAGACACCTCTTCCACATCAAATTGTAAACTTTTCAAAGAAAACTGATCCTACAACACATTATGAACAAGTAATGCAGTCGGAAGAGTTTCCTGTACGACCTGGGCAACCTGATTGTGATTATTTCATGAAAACTGGAGACTGCAAATACAGATCTGCTTGCAGGTATAACCATCCAGTAAGTCGAGACTCTAAGCTGCGTCTGCCGCTGCTTTCCTCCAAACGCCCCTATTCCAAATCTAAAAATCCCGAGCTTCCTGATTCATTTGCCGGCAATCCAAGGAAAAGTGGAGCATCGTCTCATCAACAGCAGCAACTGCAGAATGAACAGTACCCAGAACGGCCTGGACAACCAGAGTGCGAATTCTTCATGAAAACTGGCAATTGTAAATTTAAATCTGCATGTAGATACCACCATCCGAGGGACCGAATTTCTACATCTTCACCAAGTTCTCTCAATGAATCGGGACTTCCTCTAAGACCTGGTAGCAAAATCTGCCGGAACTATGAGCTACAAGGTACATGCAAATATGGTCGAAATTGTCTGTTTCATCATCCTGATATCAGCTCATCAAAAAGTTCAGTTGTTCCACCTGCTCCTGTTGCTGATCAAGATCACAGTTCATCTAATGTTGTAGTCGCCACGGATTTGGAATTTTCTGCTGGCAATGTGGACTCAGATTGGGGTGATGGCTGGGCAATGTAACTTGTTCCTATGAGCGAATTTGGTTTTTTGGCAACATTGCTGGCATCATTGTCAAGAAAAAGGAATGCCGTCTTCAGTTTTTGCAAGTTGCAACTTTTGGTGGTTGTCAACTCGAGGAATTTGATAACTTTTGGTGGTTGCTAAATGCATACCCCTTATCTTTCACAAAACAATTTATTTATCAATACTAATCCTATCTATACATAAACTGTTGATCCATGTTATTTGCCTGTGGAATTTGCTGAAACAGAGAATAGAAGTGAAAATTACTTCTGATTACTCTTTTCAACTTCATCTTTTGAGTTTTGTCATCCATCACTGTTTTGTAGTGGTGCATATTTGATGGATTATTGATAGTGGTAAGTTGTGAGAAATGCAATAGGTAGAATAGAAAGGAATTTGCTTGACTTAACGATCTTCATTTGTATGTAGATTTGATAGGTAGAACCGTAGAATGGATTCTCCAATGAGTCATTCTTCGGTCCGAAAATCCTCGTTTTTTCAGCATGAAATATAACAAGGCCTTGTTCAGTTAGCAGATGAACAATACAAATGAAAGTTAATTGTTAT

Coding sequence (CDS)

ATGGGAACCTGTGAAGAAATCAGTTCATCTATTGAAACCCAGGATGAAATTAAGTTGGGGATTTCATCAAGTGGGACCCACTGTTGGGATGAACAACTTACGGAAGAGGAAGAAGCTCTTGCTCAACAGTTTGAGAGTGTAGTTTTGCAAGGCAATGGTGTTGATGTGAAGATTGAGGGTGGAGAAGAAGAAGAGGAGAAATTACATCTTTACCCTTTGAGGCCTTATGCTGTGGATTGCCCCTTTTATCTCAAGACGGGTACTTGCAAATTTGGACCAAACTGTAGATTTAATCACCCCCCTGAGAAGGGTTTTAAGATTGTTCTGGACCAGGAGGAAGGAATTGAGGTGAGCAATGGAGCATTTGTTGATCCTGGGAAGATTGATTGCAAGTATTTCCGGACACCAGGAGGATGCAAATATGGAGATGGATGCAGATATAATCACTCTGCACAGAAAGTTGAGAGAGAAGGTCCAGAGCTTAACTTTCTAGGTTTACCAGTAAGACCGTCGGAGCAAGAGTGCACCTTTTACTTGCGTACCGGCTCCTGTGGCTATGGAATTAATTGCAGGTTCCACCATCCTGATCCTACTGCTATGAAAGAACCTGAATCCAAAAACTCATTAGCTAATGGTGTGTATGCAAGAGGTGGCAACAATTTTCCTGGAATGTTTGTTGGTGAGCCATTGCAGTCCTCTGGAGTATCACGGGGTATTCCAGACTTGGCAAATGGCCTAAGTTCGATGAATGGTTTACCTTATGCTGGGATCAACACTTATCACCAATCAATGCCCCAAAATGCTGGTTGGAACCAAGATCAGGTCAACCTTTCTATGTCAGCAAAAAAGACACCTCTTCCACATCAAATTGTAAACTTTTCAAAGAAAACTGATCCTACAACACATTATGAACAAGTAATGCAGTCGGAAGAGTTTCCTGTACGACCTGGGCAACCTGATTGTGATTATTTCATGAAAACTGGAGACTGCAAATACAGATCTGCTTGCAGGTATAACCATCCAGTAAGTCGAGACTCTAAGCTGCGTCTGCCGCTGCTTTCCTCCAAACGCCCCTATTCCAAATCTAAAAATCCCGAGCTTCCTGATTCATTTGCCGGCAATCCAAGGAAAAGTGGAGCATCGTCTCATCAACAGCAGCAACTGCAGAATGAACAGTACCCAGAACGGCCTGGACAACCAGAGTGCGAATTCTTCATGAAAACTGGCAATTGTAAATTTAAATCTGCATGTAGATACCACCATCCGAGGGACCGAATTTCTACATCTTCACCAAGTTCTCTCAATGAATCGGGACTTCCTCTAAGACCTGGTAGCAAAATCTGCCGGAACTATGAGCTACAAGGTACATGCAAATATGGTCGAAATTGTCTGTTTCATCATCCTGATATCAGCTCATCAAAAAGTTCAGTTGTTCCACCTGCTCCTGTTGCTGATCAAGATCACAGTTCATCTAATGTTGTAGTCGCCACGGATTTGGAATTTTCTGCTGGCAATGTGGACTCAGATTGGGGTGATGGCTGGGCAATGTAA

Protein sequence

MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEGGEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYHHPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPPAPVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo24948	Spo24948	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo24948.1	Spo24948.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24948.1.exon.1	Spo24948.1.exon.1	exon
Spo24948.1.exon.2	Spo24948.1.exon.2	exon
Spo24948.1.exon.3	Spo24948.1.exon.3	exon
Spo24948.1.exon.4	Spo24948.1.exon.4	exon
Spo24948.1.exon.5	Spo24948.1.exon.5	exon
Spo24948.1.exon.6	Spo24948.1.exon.6	exon
Spo24948.1.exon.7	Spo24948.1.exon.7	exon
Spo24948.1.exon.8	Spo24948.1.exon.8	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24948.1.utr5p.1	Spo24948.1.utr5p.1	five_prime_UTR
Spo24948.1.utr5p.2	Spo24948.1.utr5p.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24948.1.CDS.1	Spo24948.1.CDS.1	CDS
Spo24948.1.CDS.2	Spo24948.1.CDS.2	CDS
Spo24948.1.CDS.3	Spo24948.1.CDS.3	CDS
Spo24948.1.CDS.4	Spo24948.1.CDS.4	CDS
Spo24948.1.CDS.5	Spo24948.1.CDS.5	CDS
Spo24948.1.CDS.6	Spo24948.1.CDS.6	CDS
Spo24948.1.CDS.7	Spo24948.1.CDS.7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo24948.1.utr3p.1	Spo24948.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo24948.1 vs. NCBI nr
Match: gi|902150553|gb|KNA05433.1| (hypothetical protein SOVF_190370 [Spinacia oleracea])

HSP 1 Score: 1091.3 bits (2821), Expect = 0.000e+0
Identity = 516/516 (100.00%), Postives = 516/516 (100.00%), Query Frame = 1


		  
Query: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG 60
           MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG
Sbjct: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG 60

Query: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG 120
           GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG
Sbjct: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG 120

Query: 121 AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLR 180
           AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLR
Sbjct: 121 AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLR 180

Query: 181 TGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIP 240
           TGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIP
Sbjct: 181 TGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIP 240

Query: 241 DLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPT 300
           DLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPT
Sbjct: 241 DLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPT 300

Query: 301 THYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYS 360
           THYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYS
Sbjct: 301 THYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYS 360

Query: 361 KSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYH 420
           KSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYH
Sbjct: 361 KSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYH 420

Query: 421 HPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPP 480
           HPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPP
Sbjct: 421 HPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPP 480

Query: 481 APVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM 517
           APVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM
Sbjct: 481 APVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM 516

[Close]

BLAST of Spo24948.1 vs. NCBI nr
Match: gi|731328062|ref|XP_010674845.1| (PREDICTED: zinc finger CCCH domain-containing protein 67-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 811.2 bits (2094), Expect = 1.000e-231
Identity = 401/530 (75.66%), Postives = 441/530 (83.21%), Query Frame = 1


		  
Query: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTE------EEEALAQQFESVVLQGNGV 60
           MGTCEEI    ETQ+EIKLGISS+GTH  DE   E      EEE LAQQFESV+L+GN  
Sbjct: 1   MGTCEEIGPIDETQNEIKLGISSNGTHN-DEHCEEDGDQPTEEEVLAQQFESVILEGNES 60

Query: 61  DVKIEGGEEEEE-----KLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVL 120
           +VKIEG E+EEE     KLH YPLRPYAVDC FYLKTGTCKFG NCRFNHP E+ F+ V 
Sbjct: 61  EVKIEGEEKEEEEQGDGKLHFYPLRPYAVDCSFYLKTGTCKFGQNCRFNHPSERAFQPVQ 120

Query: 121 DQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVR 180
           DQE+G + +NG   D GKIDCKYFRTPGGCKYGD CRYNHSAQ+VEREGPELNFLGLPVR
Sbjct: 121 DQEKGTDENNGTIFDTGKIDCKYFRTPGGCKYGDACRYNHSAQRVEREGPELNFLGLPVR 180

Query: 181 PSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEP 240
           PSEQECTFYLRTGSCGYG NCRFHHPDPTA KE E +NSLANGVYARGGNN   M+VGEP
Sbjct: 181 PSEQECTFYLRTGSCGYGANCRFHHPDPTAAKESEPRNSLANGVYARGGNNMSRMYVGEP 240

Query: 241 LQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQ 300
               GVSR I +L+NG++SMNGLPYAG++ YHQ +PQNAGWN DQ +LS+S KKTPLPHQ
Sbjct: 241 ----GVSRSISELSNGINSMNGLPYAGMSPYHQVIPQNAGWNHDQADLSLSVKKTPLPHQ 300

Query: 301 IVN-FSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKL 360
           IVN  SKK D + +YEQV+QSEEFPVRPGQPDCDYFMKTGDCKYR+ACRYNHPVSRDSKL
Sbjct: 301 IVNTISKKIDSSINYEQVIQSEEFPVRPGQPDCDYFMKTGDCKYRAACRYNHPVSRDSKL 360

Query: 361 RLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKT 420
           RLP LSSK   SKS+N ELP+  +GNPRK+G  SHQQQQLQN QYPERPGQPECE+FMKT
Sbjct: 361 RLPPLSSKGLCSKSRNHELPNLNSGNPRKNGTPSHQQQQLQNGQYPERPGQPECEYFMKT 420

Query: 421 GNCKFKSACRYHHPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHP 480
           GNCKFKSACRY HPRDRISTSSP SLNESGLPLRPGSKICRNYE+QGTCKYGRNCLFHHP
Sbjct: 421 GNCKFKSACRYDHPRDRISTSSPCSLNESGLPLRPGSKICRNYEVQGTCKYGRNCLFHHP 480

Query: 481 DISSSKSSVVPPAPVADQDH-SSSNVVVATDLEFSAG-NVDSDWGDGWAM 517
           D +   +  V PAPV  Q+H SSSN+VVA ++E + G NV SDWGDGW M
Sbjct: 481 D-NGLLAVPVDPAPV--QEHSSSSNLVVAAEMESAGGDNVQSDWGDGWVM 522

[Close]

BLAST of Spo24948.1 vs. NCBI nr
Match: gi|225452232|ref|XP_002268612.1| (PREDICTED: zinc finger CCCH domain-containing protein 67 [Vitis vinifera])

HSP 1 Score: 271.9 bits (694), Expect = 2.200e-69
Identity = 157/372 (42.20%), Postives = 214/372 (57.53%), Query Frame = 1


		  
Query: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG 60
           MG+CE+  S   T D+I+LG+        D     + E L QQFE+V L+          
Sbjct: 1   MGSCEDPVSRQNTHDQIELGLMYPKP---DPDPDPDAELLVQQFENVALK---------- 60

Query: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQE-EGIEVSN 120
            + EE ++  YPLRPYA DCP+Y++TG+CKFG NC+FNHP  +  ++  ++E EG  +S 
Sbjct: 61  -DTEETEIQ-YPLRPYAQDCPYYVRTGSCKFGLNCKFNHPVTRTGQVGKERENEGEGLSE 120

Query: 121 GAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYL 180
                  KI+CKY+ T GGCKYG+ CRY+HS +  E    E NFLGLP+R  E+EC +Y+
Sbjct: 121 -------KIECKYYLTGGGCKYGNSCRYSHSKETNELATLEYNFLGLPMRVGEKECPYYM 180

Query: 181 RTGSCGYGINCRFHHPDPTAM--KEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSR 240
           RTGSCGYG NCRFHHPDPT++   EP        G  + G +N         L  SG S+
Sbjct: 181 RTGSCGYGANCRFHHPDPTSVGGSEPNGNGESVGGFDSLGNHNGESTI----LNLSGASQ 240

Query: 241 -GIPDLANGLSSMNGLPYA-GINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQ------ 300
             +P  ++ + S   +PY+   ++Y  +M   A       NL ++  + P+  Q      
Sbjct: 241 PSMPSWSSHMLSNKRVPYSDNRSSYVPAMHSVA--QGIHPNLDLNGYQAPIHSQGMPRHL 300

Query: 301 -----IVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSR 357
                +    KK+D + HYEQ  Q EEFP RPG+P+CDYFMKTGDCKY+SACRY+HP SR
Sbjct: 301 HSGLTLNKLMKKSDVSQHYEQT-QVEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSR 343

[Close]

BLAST of Spo24948.1 vs. NCBI nr
Match: gi|1009130550|ref|XP_015882360.1| (PREDICTED: zinc finger CCCH domain-containing protein 43 [Ziziphus jujuba])

HSP 1 Score: 241.5 bits (615), Expect = 3.200e-60
Identity = 134/339 (39.53%), Postives = 188/339 (55.46%), Query Frame = 1


		  
Query: 35  EEEEALAQQFESVVLQGNGVDVKIEGGEEEEEK---------LHLYPLRPYAVDCPFYLK 94
           EEEE+   + E+     NG +V++EG  +E EK          + YP+RP A DC FYLK
Sbjct: 109 EEEESDGGENENE----NGSEVEVEGNGDELEKNNEGGGSNRRNQYPVRPEAEDCSFYLK 168

Query: 95  TGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGC 154
           TGTCKFG NC+FNHP  +    V   +E ++        PG+ +CKY+   GGCK+G  C
Sbjct: 169 TGTCKFGSNCKFNHPVRRKNNQVA--KEKVKEQEELPERPGQTECKYYLRSGGCKFGKAC 228

Query: 155 RYNHSAQKVEREGP-ELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPE 214
           RYNH+  K       ELNF+GLP+R  E+EC +Y+RTGSC YG NCRF+HPDPTA    +
Sbjct: 229 RYNHTKGKTAAASVLELNFVGLPIRMGERECPYYMRTGSCKYGANCRFNHPDPTASGGFD 288

Query: 215 SKNSLANG--VYARGGNNFPGMFVGEPLQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQ 274
             +   NG  V   G    P      P   +  +  +P +   LS   G+P         
Sbjct: 289 PSSGYGNGEPVSLPGAPQSPIASWSSPRSLNETAPFVPMM---LSPTQGVP--------- 348

Query: 275 SMPQNAGWNQDQVNLSMSAKKT-----PLPHQIVNFSKKTDPTTHYEQVMQSEEFPVRPG 334
             PQN+ WN  Q  + +  ++T     P P+ + +   +++  TH++ + Q EEFP RPG
Sbjct: 349 --PQNSEWNGYQAPVYLPPERTLPPPPPPPYVMNSPVAESNIYTHHQPLKQIEEFPERPG 408

Query: 335 QPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSK 357
           QP+C YF+KTGDCK++S C+Y+HP +R +      LS K
Sbjct: 409 QPECSYFIKTGDCKFKSNCKYHHPKNRTTMSNQIALSDK 427

[Close]

BLAST of Spo24948.1 vs. NCBI nr
Match: gi|674235276|gb|KFK28041.1| (hypothetical protein AALP_AA8G464000 [Arabis alpina])

HSP 1 Score: 239.2 bits (609), Expect = 1.600e-59
Identity = 145/404 (35.89%), Postives = 204/404 (50.50%), Query Frame = 1


		  
Query: 46  SVVLQGNGV--DVKIEGGEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHP-PE 105
           SV ++GNG     + E G E E+++  YP+RP A DC FY++TG+CK+G  C+FNHP P 
Sbjct: 44  SVPIEGNGEMGSKEEEEGSEREKRMISYPVRPGAEDCLFYMRTGSCKYGSTCKFNHPAPR 103

Query: 106 K---GFKIVLDQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREG- 165
           K   G + V ++E   +V N     P  +DCKY+   GGCKYG+ CR++H+ ++      
Sbjct: 104 KRQIGREKVREREREEDVEN-----PRSMDCKYYFRTGGCKYGESCRFSHAKEQTSLPSR 163

Query: 166 PELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGG 225
           PELNFLGLP+RP E+EC FY+R GSC +  +C+F+HPDPTA+   +S     N      G
Sbjct: 164 PELNFLGLPIRPGEKECPFYMRNGSCKFVSDCKFNHPDPTAIGGVDSPLFRGNN-----G 223

Query: 226 NNFPGMFVGEPLQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAG-------WN 285
            +        P Q+S  S       NG  +   +P           PQN G       WN
Sbjct: 224 GSVGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPVM--------FPQNRGVSSQTSDWN 283

Query: 286 QDQVNLSMSAKKTPLP---HQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTG 345
             Q +     +++ LP   + + N   +T   + Y+Q M  EEFP RP QP+C YF+KTG
Sbjct: 284 GYQASSVYPQERSVLPPPTYPVNNSLSETSSFSQYQQQMPVEEFPERPDQPECTYFLKTG 343

Query: 346 DCKYRSACRYNHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQL 405
           DCK++  C+Y+HP     K RLP              + P SF                 
Sbjct: 344 DCKFKYKCKYHHP-----KNRLP-------------KKAPSSF----------------- 394

Query: 406 QNEQYPERPGQPECEFFMKTGNCKFKSACRYHHPRDRISTSSPS 433
            ++  P RP Q  C  + + G CKF  ACR+ H      +SS S
Sbjct: 404 NDKGLPLRPDQSMCTNYSRYGICKFGPACRFDHSIPPTFSSSSS 394

[Close]

BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFH9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_190370 PE=4 SV=1)

HSP 1 Score: 1091.3 bits (2821), Expect = 0.000e+0
Identity = 516/516 (100.00%), Postives = 516/516 (100.00%), Query Frame = 1


		  
Query: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG 60
           MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG
Sbjct: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG 60

Query: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG 120
           GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG
Sbjct: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG 120

Query: 121 AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLR 180
           AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLR
Sbjct: 121 AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYLR 180

Query: 181 TGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIP 240
           TGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIP
Sbjct: 181 TGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGIP 240

Query: 241 DLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPT 300
           DLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPT
Sbjct: 241 DLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPT 300

Query: 301 THYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYS 360
           THYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYS
Sbjct: 301 THYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSSKRPYS 360

Query: 361 KSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYH 420
           KSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYH
Sbjct: 361 KSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYH 420

Query: 421 HPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPP 480
           HPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPP
Sbjct: 421 HPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHPDISSSKSSVVPP 480

Query: 481 APVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM 517
           APVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM
Sbjct: 481 APVADQDHSSSNVVVATDLEFSAGNVDSDWGDGWAM 516

[Close]

BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FCR2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082120 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 7.100e-232
Identity = 401/530 (75.66%), Postives = 441/530 (83.21%), Query Frame = 1


		  
Query: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTE------EEEALAQQFESVVLQGNGV 60
           MGTCEEI    ETQ+EIKLGISS+GTH  DE   E      EEE LAQQFESV+L+GN  
Sbjct: 1   MGTCEEIGPIDETQNEIKLGISSNGTHN-DEHCEEDGDQPTEEEVLAQQFESVILEGNES 60

Query: 61  DVKIEGGEEEEE-----KLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVL 120
           +VKIEG E+EEE     KLH YPLRPYAVDC FYLKTGTCKFG NCRFNHP E+ F+ V 
Sbjct: 61  EVKIEGEEKEEEEQGDGKLHFYPLRPYAVDCSFYLKTGTCKFGQNCRFNHPSERAFQPVQ 120

Query: 121 DQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVR 180
           DQE+G + +NG   D GKIDCKYFRTPGGCKYGD CRYNHSAQ+VEREGPELNFLGLPVR
Sbjct: 121 DQEKGTDENNGTIFDTGKIDCKYFRTPGGCKYGDACRYNHSAQRVEREGPELNFLGLPVR 180

Query: 181 PSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEP 240
           PSEQECTFYLRTGSCGYG NCRFHHPDPTA KE E +NSLANGVYARGGNN   M+VGEP
Sbjct: 181 PSEQECTFYLRTGSCGYGANCRFHHPDPTAAKESEPRNSLANGVYARGGNNMSRMYVGEP 240

Query: 241 LQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQ 300
               GVSR I +L+NG++SMNGLPYAG++ YHQ +PQNAGWN DQ +LS+S KKTPLPHQ
Sbjct: 241 ----GVSRSISELSNGINSMNGLPYAGMSPYHQVIPQNAGWNHDQADLSLSVKKTPLPHQ 300

Query: 301 IVN-FSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKL 360
           IVN  SKK D + +YEQV+QSEEFPVRPGQPDCDYFMKTGDCKYR+ACRYNHPVSRDSKL
Sbjct: 301 IVNTISKKIDSSINYEQVIQSEEFPVRPGQPDCDYFMKTGDCKYRAACRYNHPVSRDSKL 360

Query: 361 RLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPGQPECEFFMKT 420
           RLP LSSK   SKS+N ELP+  +GNPRK+G  SHQQQQLQN QYPERPGQPECE+FMKT
Sbjct: 361 RLPPLSSKGLCSKSRNHELPNLNSGNPRKNGTPSHQQQQLQNGQYPERPGQPECEYFMKT 420

Query: 421 GNCKFKSACRYHHPRDRISTSSPSSLNESGLPLRPGSKICRNYELQGTCKYGRNCLFHHP 480
           GNCKFKSACRY HPRDRISTSSP SLNESGLPLRPGSKICRNYE+QGTCKYGRNCLFHHP
Sbjct: 421 GNCKFKSACRYDHPRDRISTSSPCSLNESGLPLRPGSKICRNYEVQGTCKYGRNCLFHHP 480

Query: 481 DISSSKSSVVPPAPVADQDH-SSSNVVVATDLEFSAG-NVDSDWGDGWAM 517
           D +   +  V PAPV  Q+H SSSN+VVA ++E + G NV SDWGDGW M
Sbjct: 481 D-NGLLAVPVDPAPV--QEHSSSSNLVVAAEMESAGGDNVQSDWGDGWVM 522

[Close]

BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
Match: D7SPX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0219g00170 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.600e-69
Identity = 157/372 (42.20%), Postives = 214/372 (57.53%), Query Frame = 1


		  
Query: 1   MGTCEEISSSIETQDEIKLGISSSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEG 60
           MG+CE+  S   T D+I+LG+        D     + E L QQFE+V L+          
Sbjct: 1   MGSCEDPVSRQNTHDQIELGLMYPKP---DPDPDPDAELLVQQFENVALK---------- 60

Query: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQE-EGIEVSN 120
            + EE ++  YPLRPYA DCP+Y++TG+CKFG NC+FNHP  +  ++  ++E EG  +S 
Sbjct: 61  -DTEETEIQ-YPLRPYAQDCPYYVRTGSCKFGLNCKFNHPVTRTGQVGKERENEGEGLSE 120

Query: 121 GAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREGPELNFLGLPVRPSEQECTFYL 180
                  KI+CKY+ T GGCKYG+ CRY+HS +  E    E NFLGLP+R  E+EC +Y+
Sbjct: 121 -------KIECKYYLTGGGCKYGNSCRYSHSKETNELATLEYNFLGLPMRVGEKECPYYM 180

Query: 181 RTGSCGYGINCRFHHPDPTAM--KEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSR 240
           RTGSCGYG NCRFHHPDPT++   EP        G  + G +N         L  SG S+
Sbjct: 181 RTGSCGYGANCRFHHPDPTSVGGSEPNGNGESVGGFDSLGNHNGESTI----LNLSGASQ 240

Query: 241 -GIPDLANGLSSMNGLPYA-GINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQ------ 300
             +P  ++ + S   +PY+   ++Y  +M   A       NL ++  + P+  Q      
Sbjct: 241 PSMPSWSSHMLSNKRVPYSDNRSSYVPAMHSVA--QGIHPNLDLNGYQAPIHSQGMPRHL 300

Query: 301 -----IVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSR 357
                +    KK+D + HYEQ  Q EEFP RPG+P+CDYFMKTGDCKY+SACRY+HP SR
Sbjct: 301 HSGLTLNKLMKKSDVSQHYEQT-QVEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSR 343

[Close]

BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
Match: A0A087GDT9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G464000 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.100e-59
Identity = 145/404 (35.89%), Postives = 204/404 (50.50%), Query Frame = 1


		  
Query: 46  SVVLQGNGV--DVKIEGGEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHP-PE 105
           SV ++GNG     + E G E E+++  YP+RP A DC FY++TG+CK+G  C+FNHP P 
Sbjct: 44  SVPIEGNGEMGSKEEEEGSEREKRMISYPVRPGAEDCLFYMRTGSCKYGSTCKFNHPAPR 103

Query: 106 K---GFKIVLDQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREG- 165
           K   G + V ++E   +V N     P  +DCKY+   GGCKYG+ CR++H+ ++      
Sbjct: 104 KRQIGREKVREREREEDVEN-----PRSMDCKYYFRTGGCKYGESCRFSHAKEQTSLPSR 163

Query: 166 PELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGG 225
           PELNFLGLP+RP E+EC FY+R GSC +  +C+F+HPDPTA+   +S     N      G
Sbjct: 164 PELNFLGLPIRPGEKECPFYMRNGSCKFVSDCKFNHPDPTAIGGVDSPLFRGNN-----G 223

Query: 226 NNFPGMFVGEPLQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAG-------WN 285
            +        P Q+S  S       NG  +   +P           PQN G       WN
Sbjct: 224 GSVGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPVM--------FPQNRGVSSQTSDWN 283

Query: 286 QDQVNLSMSAKKTPLP---HQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTG 345
             Q +     +++ LP   + + N   +T   + Y+Q M  EEFP RP QP+C YF+KTG
Sbjct: 284 GYQASSVYPQERSVLPPPTYPVNNSLSETSSFSQYQQQMPVEEFPERPDQPECTYFLKTG 343

Query: 346 DCKYRSACRYNHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQL 405
           DCK++  C+Y+HP     K RLP              + P SF                 
Sbjct: 344 DCKFKYKCKYHHP-----KNRLP-------------KKAPSSF----------------- 394

Query: 406 QNEQYPERPGQPECEFFMKTGNCKFKSACRYHHPRDRISTSSPS 433
            ++  P RP Q  C  + + G CKF  ACR+ H      +SS S
Sbjct: 404 NDKGLPLRPDQSMCTNYSRYGICKFGPACRFDHSIPPTFSSSSS 394

[Close]

BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDN4_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_197960 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.300e-59
Identity = 127/176 (72.16%), Postives = 130/176 (73.86%), Query Frame = 1


		  
Query: 279 MSAKKTPLPHQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRY 338
           MSAKKTPLPHQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRY
Sbjct: 1   MSAKKTPLPHQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRY 60

Query: 339 NHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPERPG 398
           NHPVSRDSKLRLPLLSSK  YSKSKNP                          + P+   
Sbjct: 61  NHPVSRDSKLRLPLLSSKGLYSKSKNP--------------------------ELPDS-- 120

Query: 399 QPECEFFMKTGNCKFKSACRYHHPRDRISTSSPSSLNESGLPLRPGSKICRNYELQ 455
                    TGN + KS   YHHPRDRISTSSPSSLNESGLPLRPGSKICRNYELQ
Sbjct: 121 --------FTGNPR-KSGASYHHPRDRISTSSPSSLNESGLPLRPGSKICRNYELQ 139

[Close]

BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.700e-59
Identity = 123/301 (40.86%), Postives = 171/301 (56.81%), Query Frame = 1


		  
Query: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG 120
           G  E E  ++YP+RP A DC FY++TG+CKFG +C+FNHP  + F+I  D +   +  +G
Sbjct: 97  GWSENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG 156

Query: 121 AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVE-REGPELNFLGLPVRPSEQECTFYL 180
             +  G IDCKY+   GGCKYG+ CR+NH+  K      PELNFLGLP+RP E EC +Y+
Sbjct: 157 GKL--GLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYM 216

Query: 181 RTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGI 240
           R GSC YG  C+F+HPDPT +   +S +   N   + G  +    F     Q+S  S   
Sbjct: 217 RNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATF-----QASSTSWSS 276

Query: 241 PDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLP---HQIVNFSKK 300
           P   NG S    +P   ++  H    QN  WN  Q ++  S +    P   + + N S +
Sbjct: 277 PRHVNGTSPF--IPVM-LSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAE 336

Query: 301 TDP-TTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSS 357
           T    + Y   M +EEFP RP QP+C Y+MKTGDCK++  C+Y+HP +R  KL    L+ 
Sbjct: 337 TSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALND 387

[Close]

BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 2.000e-57
Identity = 114/300 (38.00%), Postives = 173/300 (57.67%), Query Frame = 1


		  
Query: 53  GVDVKIEGGEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKI----V 112
           G D K E    E+  + +YP+RP + DC FY++TG+CK+G +C+FNHP  +  +I    V
Sbjct: 80  GSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERV 139

Query: 113 LDQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVEREG-PELNFLGLP 172
            +++E +E       +P  ++CKY+   GGCKYG+ CR++H  +       PELNFLGLP
Sbjct: 140 RERDEDVE-------NPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLP 199

Query: 173 VRPSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVG 232
           +RP E+EC FY+R GSC +G +C+F+HPDPTA+   +S       +Y   GNN       
Sbjct: 200 IRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSP------LYR--GNNGGSFSPK 259

Query: 233 EPLQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPL- 292
            P Q+S  S       NG  +   +P    ++     PQ + WN  Q + +   +++PL 
Sbjct: 260 APSQASSTSWSSTRHMNGTGTAPFIPSMFPHS-RGVTPQASDWNGYQASSAYPPERSPLA 319

Query: 293 --PHQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSR 345
              +Q+ N   +T   + Y+  M  EEFP RP QP+C Y++KTGDCK++  C+Y+HP +R
Sbjct: 320 PSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNR 363

[Close]

BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
Match: C3H37_ARATH (Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis thaliana GN=HUA1 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.900e-46
Identity = 123/387 (31.78%), Postives = 182/387 (47.03%), Query Frame = 1


		  
Query: 63  EEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHP---PEKGFKIVLDQEEGIEVSN 122
           E    L +YP R    DC  Y++T TCKFG +CRF+HP   PE G   + D +E   V N
Sbjct: 163 ESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGG---IPDWKEAPVVPN 222

Query: 123 GAFVD-PGKIDCKYFRTPGGCKYGDGCRYNH----SAQKVEREGPELNFLGLPVRPSEQE 182
             + + PG+ DC Y+     CKYG  C++NH    +A  VE +        LP RPSE  
Sbjct: 223 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD------SLPERPSEPM 282

Query: 183 CTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARG---GNNFPGMFVGEPLQ 242
           CTFY++TG C +G++C+FHHP    +  P S   + + V         N P +     L 
Sbjct: 283 CTFYMKTGKCKFGLSCKFHHPKDIQL--PSSSQDIGSSVGLTSEPDATNNPHVTFTPALY 342

Query: 243 SSGVSRGIPDLANGLS-----SMNGLPYAGINTYHQS-----MPQNAGWNQDQVNLSMSA 302
            +  S+G+P  +  +            Y     Y+       +PQ AG     VN S+ +
Sbjct: 343 HN--SKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAG-----VNYSLVS 402

Query: 303 KKTPLPHQIVNFSKKTDPTTHYEQVMQ------SEEFPVRPGQPDCDYFMKTGDCKYRSA 362
             T      +N    T  T+ Y+ + Q      S  +P RPGQ +CDY+MKTG+CK+   
Sbjct: 403 SNTAN----LNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGER 462

Query: 363 CRYNHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPE 422
           C+++HP       RL  ++ + P    + P +  S AG PR+ GA +             
Sbjct: 463 CKFHHPAD-----RLSAMTKQAP----QQPNVKLSLAGYPRREGALN------------- 499

[Close]

BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 4.000e-42
Identity = 103/297 (34.68%), Postives = 141/297 (47.47%), Query Frame = 1


		  
Query: 71  YPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNGAFVDP-GKID 130
           YP RP   DC +YL+TG C +G  CRFNHP ++G  I      G+    GA  +  G   
Sbjct: 51  YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVI-----GGVRGEAGALPERMGHPV 110

Query: 131 CKYFRTPGGCKYGDGCRYNHSAQKVEREGP---ELNFLGLPVRPSEQECTFYLRTGSCGY 190
           C++F   G CK+G  C+Y+H  Q           L++LG P+RP E+EC++YLRTG C +
Sbjct: 111 CQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKF 170

Query: 191 GINCRFHHPDPTAM---------KEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSR 250
           G+ CRF+HP P A+         ++P+ +  L          + P        Q  G+  
Sbjct: 171 GLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSS------QQYGLVL 230

Query: 251 GIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLP----HQIVNF 310
             P    G  S    PY         M   +GWN  Q +LS        P      I   
Sbjct: 231 TRPSFLTG--SYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGL 290

Query: 311 SKKTDPTTHYEQVMQ--------SEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPV 343
           +  +   T Y    Q        S+EFP RP QP+C YFM+TGDCK+ S+CRY+HPV
Sbjct: 291 TPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPV 334

[Close]

BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
Match: C3H58_ARATH (Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis thaliana GN=At5g18550 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.400e-39
Identity = 107/343 (31.20%), Postives = 158/343 (46.06%), Query Frame = 1


		  
Query: 23  SSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEGGEEEEEKLHLYPLRPYAVDCPF 82
           S  +H W  Q TE    +      + L+G G      GGE        +P RP   DC +
Sbjct: 14  SDPSHEWSAQGTET--GIEASMWRLGLRGGG-----GGGET-------FPERPDEPDCIY 73

Query: 83  YLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNGAFVDP-GKIDCKYFRTPGGCKY 142
           YL+TG C +G  CRFNHP  +   +      G+    G F +  G+  C++F   G CK+
Sbjct: 74  YLRTGVCGYGSRCRFNHPRNRAPVL-----GGLRTEAGEFPERMGQPVCQHFMRTGTCKF 133

Query: 143 GDGCRYNHSAQKVEREGP---ELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPT 202
           G  C+Y+H  Q    +      LN++G P+RP E+EC++++RTG C +G  CR+HHP P 
Sbjct: 134 GASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPP 193

Query: 203 AMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSS---GVSRGIPDLANGLSSMNGLPYA 262
            ++ P  +        + G   +P +   + + SS   GV    P L  G  S    PY 
Sbjct: 194 GVQAPSQQQQQQ---LSAGPTMYPSL-QSQTVPSSQQYGVVLARPQLLPG--SYVQSPYG 253

Query: 263 -GINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPTTHYEQVMQS----- 322
            G       M   +GWN  Q ++S        P    +      P +      QS     
Sbjct: 254 YGQMVLPPGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAPAYQSGPSST 313

Query: 323 ------EEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDS 347
                 + FP RP QP+C YFM+TGDCK+ ++CR++HP+   S
Sbjct: 314 GVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAAS 331

[Close]

BLAST of Spo24948.1 vs. TAIR (Arabidopsis)
Match: AT3G48440.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 230.3 bits (586), Expect = 2.600e-60
Identity = 123/301 (40.86%), Postives = 171/301 (56.81%), Query Frame = 1


		  
Query: 61  GEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNG 120
           G  E E  ++YP+RP A DC FY++TG+CKFG +C+FNHP  + F+I  D +   +  +G
Sbjct: 97  GWSENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG 156

Query: 121 AFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQKVE-REGPELNFLGLPVRPSEQECTFYL 180
             +  G IDCKY+   GGCKYG+ CR+NH+  K      PELNFLGLP+RP E EC +Y+
Sbjct: 157 GKL--GLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYM 216

Query: 181 RTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSRGI 240
           R GSC YG  C+F+HPDPT +   +S +   N   + G  +    F     Q+S  S   
Sbjct: 217 RNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATF-----QASSTSWSS 276

Query: 241 PDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLP---HQIVNFSKK 300
           P   NG S    +P   ++  H    QN  WN  Q ++  S +    P   + + N S +
Sbjct: 277 PRHVNGTSPF--IPVM-LSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAE 336

Query: 301 TDP-TTHYEQVMQSEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDSKLRLPLLSS 357
           T    + Y   M +EEFP RP QP+C Y+MKTGDCK++  C+Y+HP +R  KL    L+ 
Sbjct: 337 TSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALND 387

[Close]

BLAST of Spo24948.1 vs. TAIR (Arabidopsis)
Match: AT5G63260.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 218.0 bits (554), Expect = 1.400e-56
Identity = 114/316 (36.08%), Postives = 173/316 (54.75%), Query Frame = 1


		  
Query: 53  GVDVKIEGGEEEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEK--------- 112
           G D K E    E+  + +YP+RP + DC FY++TG+CK+G +C+FNHP  +         
Sbjct: 80  GSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQDLKFLG 139

Query: 113 -----------GFKIVLDQEEGIEVSNGAFVDPGKIDCKYFRTPGGCKYGDGCRYNHSAQ 172
                      G + V +++E +E       +P  ++CKY+   GGCKYG+ CR++H  +
Sbjct: 140 SMRTRNGKEYIGRERVRERDEDVE-------NPKLMECKYYFRTGGCKYGESCRFSHMKE 199

Query: 173 KVEREG-PELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLAN 232
                  PELNFLGLP+RP E+EC FY+R GSC +G +C+F+HPDPTA+   +S      
Sbjct: 200 HNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSP----- 259

Query: 233 GVYARGGNNFPGMFVGEPLQSSGVSRGIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWN 292
            +Y   GNN        P Q+S  S       NG  +   +P    ++     PQ + WN
Sbjct: 260 -LYR--GNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHS-RGVTPQASDWN 319

Query: 293 QDQVNLSMSAKKTPL---PHQIVNFSKKTDPTTHYEQVMQSEEFPVRPGQPDCDYFMKTG 345
             Q + +   +++PL    +Q+ N   +T   + Y+  M  EEFP RP QP+C Y++KTG
Sbjct: 320 GYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTG 379

[Close]

BLAST of Spo24948.1 vs. TAIR (Arabidopsis)
Match: AT3G12680.1 (floral homeotic protein (HUA1))

HSP 1 Score: 186.8 bits (473), Expect = 3.300e-47
Identity = 123/387 (31.78%), Postives = 182/387 (47.03%), Query Frame = 1


		  
Query: 63  EEEEKLHLYPLRPYAVDCPFYLKTGTCKFGPNCRFNHP---PEKGFKIVLDQEEGIEVSN 122
           E    L +YP R    DC  Y++T TCKFG +CRF+HP   PE G   + D +E   V N
Sbjct: 163 ESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGG---IPDWKEAPVVPN 222

Query: 123 GAFVD-PGKIDCKYFRTPGGCKYGDGCRYNH----SAQKVEREGPELNFLGLPVRPSEQE 182
             + + PG+ DC Y+     CKYG  C++NH    +A  VE +        LP RPSE  
Sbjct: 223 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD------SLPERPSEPM 282

Query: 183 CTFYLRTGSCGYGINCRFHHPDPTAMKEPESKNSLANGVYARG---GNNFPGMFVGEPLQ 242
           CTFY++TG C +G++C+FHHP    +  P S   + + V         N P +     L 
Sbjct: 283 CTFYMKTGKCKFGLSCKFHHPKDIQL--PSSSQDIGSSVGLTSEPDATNNPHVTFTPALY 342

Query: 243 SSGVSRGIPDLANGLS-----SMNGLPYAGINTYHQS-----MPQNAGWNQDQVNLSMSA 302
            +  S+G+P  +  +            Y     Y+       +PQ AG     VN S+ +
Sbjct: 343 HN--SKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAG-----VNYSLVS 402

Query: 303 KKTPLPHQIVNFSKKTDPTTHYEQVMQ------SEEFPVRPGQPDCDYFMKTGDCKYRSA 362
             T      +N    T  T+ Y+ + Q      S  +P RPGQ +CDY+MKTG+CK+   
Sbjct: 403 SNTAN----LNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGER 462

Query: 363 CRYNHPVSRDSKLRLPLLSSKRPYSKSKNPELPDSFAGNPRKSGASSHQQQQLQNEQYPE 422
           C+++HP       RL  ++ + P    + P +  S AG PR+ GA +             
Sbjct: 463 CKFHHPAD-----RLSAMTKQAP----QQPNVKLSLAGYPRREGALN------------- 499

[Close]

BLAST of Spo24948.1 vs. TAIR (Arabidopsis)
Match: AT3G06410.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 174.1 bits (440), Expect = 2.200e-43
Identity = 103/297 (34.68%), Postives = 141/297 (47.47%), Query Frame = 1


		  
Query: 71  YPLRPYAVDCPFYLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNGAFVDP-GKID 130
           YP RP   DC +YL+TG C +G  CRFNHP ++G  I      G+    GA  +  G   
Sbjct: 51  YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVI-----GGVRGEAGALPERMGHPV 110

Query: 131 CKYFRTPGGCKYGDGCRYNHSAQKVEREGP---ELNFLGLPVRPSEQECTFYLRTGSCGY 190
           C++F   G CK+G  C+Y+H  Q           L++LG P+RP E+EC++YLRTG C +
Sbjct: 111 CQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKF 170

Query: 191 GINCRFHHPDPTAM---------KEPESKNSLANGVYARGGNNFPGMFVGEPLQSSGVSR 250
           G+ CRF+HP P A+         ++P+ +  L          + P        Q  G+  
Sbjct: 171 GLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSS------QQYGLVL 230

Query: 251 GIPDLANGLSSMNGLPYAGINTYHQSMPQNAGWNQDQVNLSMSAKKTPLP----HQIVNF 310
             P    G  S    PY         M   +GWN  Q +LS        P      I   
Sbjct: 231 TRPSFLTG--SYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGL 290

Query: 311 SKKTDPTTHYEQVMQ--------SEEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPV 343
           +  +   T Y    Q        S+EFP RP QP+C YFM+TGDCK+ S+CRY+HPV
Sbjct: 291 TPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPV 334

[Close]

BLAST of Spo24948.1 vs. TAIR (Arabidopsis)
Match: AT5G18550.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 165.6 bits (418), Expect = 8.000e-41
Identity = 107/343 (31.20%), Postives = 158/343 (46.06%), Query Frame = 1


		  
Query: 23  SSGTHCWDEQLTEEEEALAQQFESVVLQGNGVDVKIEGGEEEEEKLHLYPLRPYAVDCPF 82
           S  +H W  Q TE    +      + L+G G      GGE        +P RP   DC +
Sbjct: 14  SDPSHEWSAQGTET--GIEASMWRLGLRGGG-----GGGET-------FPERPDEPDCIY 73

Query: 83  YLKTGTCKFGPNCRFNHPPEKGFKIVLDQEEGIEVSNGAFVDP-GKIDCKYFRTPGGCKY 142
           YL+TG C +G  CRFNHP  +   +      G+    G F +  G+  C++F   G CK+
Sbjct: 74  YLRTGVCGYGSRCRFNHPRNRAPVL-----GGLRTEAGEFPERMGQPVCQHFMRTGTCKF 133

Query: 143 GDGCRYNHSAQKVEREGP---ELNFLGLPVRPSEQECTFYLRTGSCGYGINCRFHHPDPT 202
           G  C+Y+H  Q    +      LN++G P+RP E+EC++++RTG C +G  CR+HHP P 
Sbjct: 134 GASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPP 193

Query: 203 AMKEPESKNSLANGVYARGGNNFPGMFVGEPLQSS---GVSRGIPDLANGLSSMNGLPYA 262
            ++ P  +        + G   +P +   + + SS   GV    P L  G  S    PY 
Sbjct: 194 GVQAPSQQQQQQ---LSAGPTMYPSL-QSQTVPSSQQYGVVLARPQLLPG--SYVQSPYG 253

Query: 263 -GINTYHQSMPQNAGWNQDQVNLSMSAKKTPLPHQIVNFSKKTDPTTHYEQVMQS----- 322
            G       M   +GWN  Q ++S        P    +      P +      QS     
Sbjct: 254 YGQMVLPPGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAPAYQSGPSST 313

Query: 323 ------EEFPVRPGQPDCDYFMKTGDCKYRSACRYNHPVSRDS 347
                 + FP RP QP+C YFM+TGDCK+ ++CR++HP+   S
Sbjct: 314 GVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAAS 331

The following BLAST results are available for this feature:

BLAST of Spo24948.1 vs. NCBI nr
BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
BLAST of Spo24948.1 vs. TAIR (Arabidopsis)

BLAST of Spo24948.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902150553\|gb\|KNA05433.1\|	0.0e+0	100.	hypothetical protein SOVF_1903...	[more]
gi\|731328062\|ref\|XP_010674845.1\|	1.0e-231	75.6	PREDICTED: zinc finger CCCH do...	[more]
gi\|225452232\|ref\|XP_002268612.1\|	2.2e-69	42.2	PREDICTED: zinc finger CCCH do...	[more]
gi\|1009130550\|ref\|XP_015882360.1\|	3.2e-60	39.5	PREDICTED: zinc finger CCCH do...	[more]
gi\|674235276\|gb\|KFK28041.1\|	1.6e-59	35.8	hypothetical protein AALP_AA8G...	[more]

BLAST of Spo24948.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QFH9_SPIOL	0.0e+0	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FCR2_BETVU	7.1e-232	75.6	Uncharacterized protein OS=Bet...	[more]
D7SPX8_VITVI	1.6e-69	42.2	Putative uncharacterized prote...	[more]
A0A087GDT9_ARAAL	1.1e-59	35.8	Uncharacterized protein OS=Ara...	[more]
A0A0K9QDN4_SPIOL	3.3e-59	72.1	Uncharacterized protein (Fragm...	[more]

BLAST of Spo24948.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
C3H43_ARATH	4.7e-59	40.8	Zinc finger CCCH domain-contai...	[more]
C3H67_ARATH	2.0e-57	38.0	Zinc finger CCCH domain-contai...	[more]
C3H37_ARATH	5.9e-46	31.7	Zinc finger CCCH domain-contai...	[more]
C3H34_ARATH	4.0e-42	34.6	Zinc finger CCCH domain-contai...	[more]
C3H58_ARATH	1.4e-39	31.2	Zinc finger CCCH domain-contai...	[more]

BLAST of Spo24948.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G48440.1	2.6e-60	40.8	Zinc finger C-x8-C-x5-C-x3-H t...	[more]
AT5G63260.2	1.4e-56	36.0	Zinc finger C-x8-C-x5-C-x3-H t...	[more]
AT3G12680.1	3.3e-47	31.7	floral homeotic protein (HUA1)	[more]
AT3G06410.1	2.2e-43	34.6	Zinc finger C-x8-C-x5-C-x3-H t...	[more]
AT5G18550.1	8.0e-41	31.2	Zinc finger C-x8-C-x5-C-x3-H t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	4.10.1000.10		coord: 175..194 score: 1.5E-4coord: 446..467 score: 6.1E-6coord: 130..151 score: 7.0E-5coord: 80..101 score: 3.
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 444..468 score: 1.8E-6coord: 317..341 score: 4.5E-7coord: 398..423 score: 4.3E-6coord: 172..195 score: 4.6E-8coord: 78..101 score: 4.9E-10coord: 128..150 score: 3.
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 74..101 score: 2.0E-6coord: 442..469 score: 2.7E-6coord: 315..342 score: 3.9E-5coord: 396..423 score: 7.7E-5coord: 169..196 score: 2.1E-5coord: 124..151 score: 0
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 442..470 score: 14.633coord: 315..343 score: 13.422coord: 124..152 score: 14.136coord: 74..102 score: 16.324coord: 396..424 score: 14.821coord: 169..197 score: 14
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 400..425 score: 3.4E-5coord: 79..102 score: 6.67E-6coord: 129..153 score: 2.35E-5coord: 320..343 score: 9.68E-5coord: 171..197 score: 7.2E-6coord: 445..468 score: 6.4
None	No IPR available	PANTHER	PTHR12506	PROTEIN PHOSPHATASE RELATED	coord: 341..487 score: 2.2E-92coord: 30..275 score: 2.2
None	No IPR available	PANTHER	PTHR12506:SF20	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 43	coord: 341..487 score: 2.2E-92coord: 30..275 score: 2.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding