Spo25304.1 (mRNA) | SpinachBase

Overview


Name	Spo25304.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Stress responsive A/B barrel domain protein
Location	chr2 : 5952043 .. 5952819 (-)
Sequence length	777

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGTGCAACAACTCGCCCACTATTCAACTCACCAGCCACCCACTTCACCACGCGCCACCCTCTCCTCCGCCGCTATTCTCCCTCCTGCACCACTCGAATCACAATGTCCTCCACCCCTTCACCATCAACCATCGAACACATTGTCCTCTTCAACGTAAAACCCACCGCAGACGCCACCCAACTCTCCGCCATGGTCAACGGTCTAAACGGCCTTAACACCCTCCCAATGGTCCTCTACCTCACCGCCGGAAAACTCCACCGCAACCGCTCATCCTCTCTCTCCTTCACCCACATGCTTCACAGCAGGTACCGCACAAAAGAAGATCTAGCCAACTACTCCGCCCACCAGGATCATCTCTCCGTCGTCCGAAGCAGCGTTTTGCCTATCTGCGACGATTTATTGGCCGTAGATTGGGTGGCGGGGAATCTCGAGGGTCCGATTGGGGTTAAACCCGGTTCCGCCATGAGGCTTCAGCTTGTCAAGCTTAAGGAAGGGTTAGAAGAGACAAAAAAGAGGGAAGTATTTGATGTGATTAGTGGATTGAAGGAGAAAACGAGCGGAATTGAGCAATTAACTTATGGGGAGAACTTTTCGCCGGCGAGAGCGAAAGGGTTTGAGATTTGTTCAATTGGGGTTTTTGGTGGGATTAAGGAATTGGATTCTTTGGAATCGGATTCTGAAATTGCTAAAGAGAAAGACAAGGTTAGGGATTCTATTGATTCTCTTGTCATTGTTGATTATGTTGTTCCACCTTCGCCTTCAAATCTTTGA

mRNA sequence

ATGCTCTGTGCAACAACTCGCCCACTATTCAACTCACCAGCCACCCACTTCACCACGCGCCACCCTCTCCTCCGCCGCTATTCTCCCTCCTGCACCACTCGAATCACAATGTCCTCCACCCCTTCACCATCAACCATCGAACACATTGTCCTCTTCAACGTAAAACCCACCGCAGACGCCACCCAACTCTCCGCCATGGTCAACGGTCTAAACGGCCTTAACACCCTCCCAATGGTCCTCTACCTCACCGCCGGAAAACTCCACCGCAACCGCTCATCCTCTCTCTCCTTCACCCACATGCTTCACAGCAGGTACCGCACAAAAGAAGATCTAGCCAACTACTCCGCCCACCAGGATCATCTCTCCGTCGTCCGAAGCAGCGTTTTGCCTATCTGCGACGATTTATTGGCCGTAGATTGGGTGGCGGGGAATCTCGAGGGTCCGATTGGGGTTAAACCCGGTTCCGCCATGAGGCTTCAGCTTGTCAAGCTTAAGGAAGGGTTAGAAGAGACAAAAAAGAGGGAAGTATTTGATGTGATTAGTGGATTGAAGGAGAAAACGAGCGGAATTGAGCAATTAACTTATGGGGAGAACTTTTCGCCGGCGAGAGCGAAAGGGTTTGAGATTTGTTCAATTGGGGTTTTTGGTGGGATTAAGGAATTGGATTCTTTGGAATCGGATTCTGAAATTGCTAAAGAGAAAGACAAGGTTAGGGATTCTATTGATTCTCTTGTCATTGTTGATTATGTTGTTCCACCTTCGCCTTCAAATCTTTGA

Coding sequence (CDS)

ATGCTCTGTGCAACAACTCGCCCACTATTCAACTCACCAGCCACCCACTTCACCACGCGCCACCCTCTCCTCCGCCGCTATTCTCCCTCCTGCACCACTCGAATCACAATGTCCTCCACCCCTTCACCATCAACCATCGAACACATTGTCCTCTTCAACGTAAAACCCACCGCAGACGCCACCCAACTCTCCGCCATGGTCAACGGTCTAAACGGCCTTAACACCCTCCCAATGGTCCTCTACCTCACCGCCGGAAAACTCCACCGCAACCGCTCATCCTCTCTCTCCTTCACCCACATGCTTCACAGCAGGTACCGCACAAAAGAAGATCTAGCCAACTACTCCGCCCACCAGGATCATCTCTCCGTCGTCCGAAGCAGCGTTTTGCCTATCTGCGACGATTTATTGGCCGTAGATTGGGTGGCGGGGAATCTCGAGGGTCCGATTGGGGTTAAACCCGGTTCCGCCATGAGGCTTCAGCTTGTCAAGCTTAAGGAAGGGTTAGAAGAGACAAAAAAGAGGGAAGTATTTGATGTGATTAGTGGATTGAAGGAGAAAACGAGCGGAATTGAGCAATTAACTTATGGGGAGAACTTTTCGCCGGCGAGAGCGAAAGGGTTTGAGATTTGTTCAATTGGGGTTTTTGGTGGGATTAAGGAATTGGATTCTTTGGAATCGGATTCTGAAATTGCTAAAGAGAAAGACAAGGTTAGGGATTCTATTGATTCTCTTGTCATTGTTGATTATGTTGTTCCACCTTCGCCTTCAAATCTTTGA

Protein sequence

MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDSIDSLVIVDYVVPPSPSNL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25304	Spo25304	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25304.1	Spo25304.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25304.1.CDS.1	Spo25304.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25304.1.exon.1	Spo25304.1.exon.1	exon

Homology

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BLAST of Spo25304.1 vs. NCBI nr
Match: gi|902210984|gb|KNA16585.1| (hypothetical protein SOVF_087880 [Spinacia oleracea])

HSP 1 Score: 505.4 bits (1300), Expect = 6.000e-140
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1


		  
Query: 1   MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADA 60
           MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADA
Sbjct: 1   MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADA 60

Query: 61  TQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDH 120
           TQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDH
Sbjct: 61  TQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDH 120

Query: 121 LSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVI 180
           LSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVI
Sbjct: 121 LSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVI 180

Query: 181 SGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDS 240
           SGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDS
Sbjct: 181 SGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDS 240

Query: 241 IDSLVIVDYVVPPSPSNL 259
           IDSLVIVDYVVPPSPSNL
Sbjct: 241 IDSLVIVDYVVPPSPSNL 258

[Close]

BLAST of Spo25304.1 vs. NCBI nr
Match: gi|731372125|ref|XP_010666252.1| (PREDICTED: uncharacterized protein LOC104883426 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 341.3 bits (874), Expect = 1.500e-90
Identity = 177/261 (67.82%), Postives = 212/261 (81.23%), Query Frame = 1


		  
Query: 1   MLCATTRPLFNSPATHFTTRHPLLRRYS---------PSCTTRITMSSTPSPSTIEHIVL 60
           ML  TTRPLFNSP THFT RH LLRR+S          + TT+I MSS   PSTIEHIVL
Sbjct: 1   MLSTTTRPLFNSPLTHFTPRHTLLRRHSLTRRHSLSTTTTTTQIKMSSP--PSTIEHIVL 60

Query: 61  FNVKPTADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDL 120
           F VKPT+ +TQLS+M+ GLN L TLP VL+LTAGKLH++ S + SFTH+LHSRY TK+DL
Sbjct: 61  FKVKPTSTSTQLSSMLTGLNSLTTLPNVLHLTAGKLHQSLSPTFSFTHILHSRYATKQDL 120

Query: 121 ANYSAHQDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEET 180
           ANYS+H DHLSVVR++VLPICDD++AVDWV  NL GPI VKPGSA+RLQL+KLK+G+ E 
Sbjct: 121 ANYSSHPDHLSVVRTNVLPICDDIMAVDWVNDNLNGPIVVKPGSAIRLQLIKLKDGVGER 180

Query: 181 KKREVFDVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIA 240
           +K +VF+VISGLKEK +GI QL++GENFSP R KGFEICSIGVF G+ +L++LE + EI 
Sbjct: 181 EKSDVFEVISGLKEKLAGILQLSFGENFSPGRNKGFEICSIGVFTGVDDLNALEGNLEIV 240

Query: 241 KEKDKVRDSIDSLVIVDYVVP 253
           KEKDKVRD ID L++VDYVVP
Sbjct: 241 KEKDKVRDFIDDLIVVDYVVP 259

[Close]

BLAST of Spo25304.1 vs. NCBI nr
Match: gi|697175727|ref|XP_009596806.1| (PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis])

HSP 1 Score: 256.1 bits (653), Expect = 6.400e-65
Identity = 134/256 (52.34%), Postives = 180/256 (70.31%), Query Frame = 1


		  
Query: 5   TTRPLFNSPATHFTTRHPL---LRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADAT 64
           T+ P   +P +HF + +P     R + P  + R    S  +   +EH+VLF  KP  D +
Sbjct: 43  TSGPAPPTPCSHFLSPNPTPTTFRHFKPYSSFRSIKMS--AEQIVEHVVLFKAKPDVDPS 102

Query: 65  QLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDHL 124
           +LSAM N LN L +L  V++L+AG L R+RSSS SFTH+LHSRY++K DLA+YSAH DH+
Sbjct: 103 KLSAMANNLNSLTSLSQVVHLSAGPLVRDRSSSFSFTHILHSRYKSKSDLADYSAHPDHV 162

Query: 125 SVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVIS 184
           SVV+  VLP+ DD++AVDW+  +  GPI V PGSA+R+  +KLKE L E++K +V   I 
Sbjct: 163 SVVKEYVLPVVDDIMAVDWIPTDFSGPIEVAPGSALRVTFLKLKENLGESEKSQVLSAIG 222

Query: 185 GLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKE-KDKVRDS 244
           G+KEK  GIEQLT GENFSP RAKGF I SI VF G+ EL++LE+ +E+A E K+KVRD 
Sbjct: 223 GIKEKFPGIEQLTVGENFSPGRAKGFSIASIAVFKGVNELEALEAQTELANEQKEKVRDF 282

Query: 245 IDSLVIVDYVVPPSPS 257
           +D +V+VDY VPP+ S
Sbjct: 283 LDGVVVVDYAVPPTQS 296

[Close]

BLAST of Spo25304.1 vs. NCBI nr
Match: gi|470102347|ref|XP_004287616.1| (PREDICTED: uncharacterized protein LOC101314596 [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.8 bits (652), Expect = 8.300e-65
Identity = 123/225 (54.67%), Postives = 173/225 (76.89%), Query Frame = 1


		  
Query: 33  TRITMSSTPSPSTIEHIVLFNVKPTADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRS 92
           T +T++ + SP  +EH+VLFNVKP  D +++++MVNGLN L +L + L+LTAG L R RS
Sbjct: 38  TLVTVTMSSSPVVVEHVVLFNVKPDTDPSKVNSMVNGLNNLTSLDLTLHLTAGPLLRTRS 97

Query: 93  SSLSFTHMLHSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVK 152
           S  +FTH+LHSRY +K+ LA YSAH  HLSVV+ SVLPICDD++AVDWVA  L GP+G+ 
Sbjct: 98  SPFAFTHLLHSRYSSKDSLAAYSAHPGHLSVVKESVLPICDDVMAVDWVADGLTGPVGLA 157

Query: 153 PGSAMRLQLVKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPARAKGFEICSI 212
           PGSA+R+  +K+KEGL+E  K E+ +VI G+K K   + Q++ GENFSPARAKG+ I S+
Sbjct: 158 PGSAIRVTFLKVKEGLDEAAKGEILEVIKGIKGKFGEVGQISVGENFSPARAKGYSIASV 217

Query: 213 GVFGGIKELDSLESDSEIAK-EKDKVRDSIDSLVIVDYVVPPSPS 257
            VF G+ E+++++S  E+AK EKDKVR+ ++S++++DYVVP   S
Sbjct: 218 AVFKGVSEMEAVDSKEELAKLEKDKVREYLESVIVLDYVVPSPQS 262

[Close]

BLAST of Spo25304.1 vs. NCBI nr
Match: gi|565350822|ref|XP_006342361.1| (PREDICTED: uncharacterized protein LOC102600885 [Solanum tuberosum])

HSP 1 Score: 252.3 bits (643), Expect = 9.200e-64
Identity = 131/234 (55.98%), Postives = 170/234 (72.65%), Query Frame = 1


		  
Query: 24  LRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADATQLSAMVNGLNGLNTLPMVLYLT 83
           LR  +P C+ R    S  +   +EH+VLF  KP AD ++L+AMVN LN L +L  V++L+
Sbjct: 30  LRHLNPYCSFRSIKMS--AEQIVEHVVLFKAKPDADPSKLAAMVNNLNSLTSLNQVVHLS 89

Query: 84  AGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAG 143
           +G L R+RSSS SFTH+LHSRY++K DLA+YSAH DH+SVV+  VLP+ DD++AVDWV  
Sbjct: 90  SGPLIRDRSSSFSFTHLLHSRYKSKSDLADYSAHPDHVSVVKQYVLPMVDDIMAVDWVPI 149

Query: 144 NLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPAR 203
              GP GV PGSAMRL  +KLKE L E +K +V   + G+KEK  GIEQLT GENFSP R
Sbjct: 150 EFSGPTGVPPGSAMRLTFLKLKENLGENEKSQVLSAVGGIKEKFPGIEQLTVGENFSPGR 209

Query: 204 AKGFEICSIGVFGGIKELDSLESDSEIAKE-KDKVRDSIDSLVIVDYVVPPSPS 257
           AKGF I SI VF G+ EL++LES +E+A E K+KV+D +D +V+VDY V P+ S
Sbjct: 210 AKGFSIASIAVFKGVDELEALESQTELANEQKEKVKDFLDGVVVVDYAVLPTQS 261

[Close]

BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAR6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087880 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.200e-140
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1


		  
Query: 1   MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADA 60
           MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADA
Sbjct: 1   MLCATTRPLFNSPATHFTTRHPLLRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADA 60

Query: 61  TQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDH 120
           TQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDH
Sbjct: 61  TQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDH 120

Query: 121 LSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVI 180
           LSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVI
Sbjct: 121 LSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVI 180

Query: 181 SGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDS 240
           SGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDS
Sbjct: 181 SGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKEKDKVRDS 240

Query: 241 IDSLVIVDYVVPPSPSNL 259
           IDSLVIVDYVVPPSPSNL
Sbjct: 241 IDSLVIVDYVVPPSPSNL 258

[Close]

BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B8N6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_000920 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.000e-90
Identity = 177/261 (67.82%), Postives = 212/261 (81.23%), Query Frame = 1


		  
Query: 1   MLCATTRPLFNSPATHFTTRHPLLRRYS---------PSCTTRITMSSTPSPSTIEHIVL 60
           ML  TTRPLFNSP THFT RH LLRR+S          + TT+I MSS   PSTIEHIVL
Sbjct: 1   MLSTTTRPLFNSPLTHFTPRHTLLRRHSLTRRHSLSTTTTTTQIKMSSP--PSTIEHIVL 60

Query: 61  FNVKPTADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDL 120
           F VKPT+ +TQLS+M+ GLN L TLP VL+LTAGKLH++ S + SFTH+LHSRY TK+DL
Sbjct: 61  FKVKPTSTSTQLSSMLTGLNSLTTLPNVLHLTAGKLHQSLSPTFSFTHILHSRYATKQDL 120

Query: 121 ANYSAHQDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEET 180
           ANYS+H DHLSVVR++VLPICDD++AVDWV  NL GPI VKPGSA+RLQL+KLK+G+ E 
Sbjct: 121 ANYSSHPDHLSVVRTNVLPICDDIMAVDWVNDNLNGPIVVKPGSAIRLQLIKLKDGVGER 180

Query: 181 KKREVFDVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIA 240
           +K +VF+VISGLKEK +GI QL++GENFSP R KGFEICSIGVF G+ +L++LE + EI 
Sbjct: 181 EKSDVFEVISGLKEKLAGILQLSFGENFSPGRNKGFEICSIGVFTGVDDLNALEGNLEIV 240

Query: 241 KEKDKVRDSIDSLVIVDYVVP 253
           KEKDKVRD ID L++VDYVVP
Sbjct: 241 KEKDKVRDFIDDLIVVDYVVP 259

[Close]

BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
Match: M1BQ55_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019568 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.400e-64
Identity = 131/234 (55.98%), Postives = 170/234 (72.65%), Query Frame = 1


		  
Query: 24  LRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADATQLSAMVNGLNGLNTLPMVLYLT 83
           LR  +P C+ R    S  +   +EH+VLF  KP AD ++L+AMVN LN L +L  V++L+
Sbjct: 30  LRHLNPYCSFRSIKMS--AEQIVEHVVLFKAKPDADPSKLAAMVNNLNSLTSLNQVVHLS 89

Query: 84  AGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAG 143
           +G L R+RSSS SFTH+LHSRY++K DLA+YSAH DH+SVV+  VLP+ DD++AVDWV  
Sbjct: 90  SGPLIRDRSSSFSFTHLLHSRYKSKSDLADYSAHPDHVSVVKQYVLPMVDDIMAVDWVPI 149

Query: 144 NLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPAR 203
              GP GV PGSAMRL  +KLKE L E +K +V   + G+KEK  GIEQLT GENFSP R
Sbjct: 150 EFSGPTGVPPGSAMRLTFLKLKENLGENEKSQVLSAVGGIKEKFPGIEQLTVGENFSPGR 209

Query: 204 AKGFEICSIGVFGGIKELDSLESDSEIAKE-KDKVRDSIDSLVIVDYVVPPSPS 257
           AKGF I SI VF G+ EL++LES +E+A E K+KV+D +D +V+VDY V P+ S
Sbjct: 210 AKGFSIASIAVFKGVDELEALESQTELANEQKEKVKDFLDGVVVVDYAVLPTQS 261

[Close]

BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
Match: K4CE22_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.100e-63
Identity = 136/249 (54.62%), Postives = 174/249 (69.88%), Query Frame = 1


		  
Query: 10  FNSPATHFTTRHPLLRRY-SPSCTTRITMSSTPSPSTIEHIVLFNVKPTADATQLSAMVN 69
           F SP     T   + RR+  P C  R    S  +   +EH+VLF  KP AD ++L+AMVN
Sbjct: 18  FLSPRAFPPTAIAITRRHLKPYCLYRSIKMS--AEQIVEHVVLFKAKPDADPSKLTAMVN 77

Query: 70  GLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDHLSVVRSSV 129
            LN L +L  V++L++G L R+RSSS SFTH+LHSRY++K DLA+YSAH DH+SVVR  V
Sbjct: 78  NLNSLTSLNQVVHLSSGPLIRDRSSSFSFTHILHSRYKSKSDLADYSAHPDHVSVVRQYV 137

Query: 130 LPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVISGLKEKTS 189
           LP+ DD++AVDWV     GP GV PGSAMRL  +KLKE L E +K +V   + G+KEK S
Sbjct: 138 LPVVDDIMAVDWVPIEFSGPTGVPPGSAMRLTFLKLKENLGENEKSQVLSAVGGIKEKFS 197

Query: 190 GIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIAKE-KDKVRDSIDSLVIV 249
           GIEQLT GENFSP RAKGF I SI VF G+ EL++LES +E+A E K+KV++ +D  V+V
Sbjct: 198 GIEQLTVGENFSPGRAKGFSIASIAVFKGVDELEALESQTELANEQKEKVKEFLDGAVVV 257

Query: 250 DYVVPPSPS 257
           DY V P+ S
Sbjct: 258 DYAVLPTQS 264

[Close]

BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
Match: A0A0V0I1Q7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.100e-62
Identity = 129/234 (55.13%), Postives = 168/234 (71.79%), Query Frame = 1


		  
Query: 24  LRRYSPSCTTRITMSSTPSPSTIEHIVLFNVKPTADATQLSAMVNGLNGLNTLPMVLYLT 83
           LR  +P C+ R    S  +   +EH+VLF  KP A  ++L+ MVN LN L +L  V++L+
Sbjct: 29  LRHLNPYCSYRSIKMS--AEQIVEHVVLFKAKPDAGPSKLADMVNNLNSLTSLNQVVHLS 88

Query: 84  AGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAG 143
           +G L R+RSSS SFTH+LHSRY++K DLA+YSAH DH+SVV+  VLP+ DD++AVDWV  
Sbjct: 89  SGPLIRDRSSSFSFTHLLHSRYKSKSDLADYSAHPDHVSVVKQYVLPMVDDIMAVDWVPI 148

Query: 144 NLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPAR 203
              GP GV PGSAMRL  +KLKE L E +K +V   + G+KEK  GIEQLT GENFSP R
Sbjct: 149 EFSGPTGVPPGSAMRLTFLKLKENLGENEKSQVLSAVGGIKEKFPGIEQLTVGENFSPGR 208

Query: 204 AKGFEICSIGVFGGIKELDSLESDSEIAKE-KDKVRDSIDSLVIVDYVVPPSPS 257
           AKGF I SI VF G+ EL++LES +E+A E K+KV+D +D +V+VDY V P+ S
Sbjct: 209 AKGFSIASIAVFKGVDELEALESQTELANEQKEKVKDFLDGVVVVDYAVLPTQS 260

[Close]

BLAST of Spo25304.1 vs. ExPASy Swiss-Prot
Match: UP3_ARATH (Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana GN=UP3 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.900e-63
Identity = 128/258 (49.61%), Postives = 177/258 (68.60%), Query Frame = 1


		  
Query: 1   MLCATTRPLFNSPA--THFTTRHPLLR-RYSPSCTTRITMSSTPSPSTIEHIVLFNVKPT 60
           M+CA  RPL +SP   T  TT+H  +  R  P  +  +  SSTP    IEHIVLF  K  
Sbjct: 1   MICARIRPLISSPLAFTISTTKHSRINLRLLPRRSFSVMSSSTPQSQIIEHIVLFKTKDD 60

Query: 61  ADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAH 120
           AD+T++++M+N LN L  L  VL+++   LHR  SS+ +FTH+LHSRY +KEDLA+Y+AH
Sbjct: 61  ADSTKITSMINNLNALAYLDQVLHISTSPLHRI-SSATAFTHVLHSRYESKEDLASYAAH 120

Query: 121 QDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVF 180
            DH+ VV+ SVLPICDD++AVDW+A  + G +   PGS  +L L+KLKE + +  K E+ 
Sbjct: 121 PDHVRVVKESVLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEIT 180

Query: 181 DVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIA-KEKDK 240
            VI GL EK  GI+Q+T GENFSPARAKGF I SI  F  + E++++++  E+   +KDK
Sbjct: 181 GVIKGLSEKFPGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDK 240

Query: 241 VRDSIDSLVIVDYVVPPS 255
           VRD +DS ++V++VVP S
Sbjct: 241 VRDYVDSTIVVEFVVPSS 257

[Close]

BLAST of Spo25304.1 vs. ExPASy Swiss-Prot
Match: DABB1_ARATH (Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana GN=DABB1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.000e-38
Identity = 90/213 (42.25%), Postives = 138/213 (64.79%), Query Frame = 1


		  
Query: 44  STIEHIVLFNVKPT-ADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLS-FTHML 103
           S +EH+VLF +     D+ ++++MVNG+N L  L  VL+L  G +HR  +++ S FTH+L
Sbjct: 3   SIVEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVL 62

Query: 104 HSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQL 163
           HSRYR+KEDL  Y+ H DH+ VV+ S   I +D++AVDW+A      +    GS  ++ L
Sbjct: 63  HSRYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITL 122

Query: 164 VKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKEL 223
           +KLKE + E  K E+ +V   +KEK  GI+Q+T GENFSP R+K F I SI  F  + E+
Sbjct: 123 LKLKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEI 182

Query: 224 DSLESDSEIAKEKDKVRDSIDSLVIVDYVVPPS 255
           +++  D ++  + DK+RD +D  ++V++ VP S
Sbjct: 183 EAV--DDQMKLQNDKIRDYVDDTIVVEFNVPSS 209

[Close]

BLAST of Spo25304.1 vs. TAIR (Arabidopsis)
Match: AT2G31670.1 (Stress responsive alpha-beta barrel domain protein)

HSP 1 Score: 242.3 bits (617), Expect = 3.300e-64
Identity = 128/258 (49.61%), Postives = 177/258 (68.60%), Query Frame = 1


		  
Query: 1   MLCATTRPLFNSPA--THFTTRHPLLR-RYSPSCTTRITMSSTPSPSTIEHIVLFNVKPT 60
           M+CA  RPL +SP   T  TT+H  +  R  P  +  +  SSTP    IEHIVLF  K  
Sbjct: 1   MICARIRPLISSPLAFTISTTKHSRINLRLLPRRSFSVMSSSTPQSQIIEHIVLFKTKDD 60

Query: 61  ADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLSFTHMLHSRYRTKEDLANYSAH 120
           AD+T++++M+N LN L  L  VL+++   LHR  SS+ +FTH+LHSRY +KEDLA+Y+AH
Sbjct: 61  ADSTKITSMINNLNALAYLDQVLHISTSPLHRI-SSATAFTHVLHSRYESKEDLASYAAH 120

Query: 121 QDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQLVKLKEGLEETKKREVF 180
            DH+ VV+ SVLPICDD++AVDW+A  + G +   PGS  +L L+KLKE + +  K E+ 
Sbjct: 121 PDHVRVVKESVLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEIT 180

Query: 181 DVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKELDSLESDSEIA-KEKDK 240
            VI GL EK  GI+Q+T GENFSPARAKGF I SI  F  + E++++++  E+   +KDK
Sbjct: 181 GVIKGLSEKFPGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDK 240

Query: 241 VRDSIDSLVIVDYVVPPS 255
           VRD +DS ++V++VVP S
Sbjct: 241 VRDYVDSTIVVEFVVPSS 257

[Close]

BLAST of Spo25304.1 vs. TAIR (Arabidopsis)
Match: AT1G51360.1 (dimeric A/B barrel domainS-protein 1)

HSP 1 Score: 160.2 bits (404), Expect = 1.700e-39
Identity = 90/213 (42.25%), Postives = 138/213 (64.79%), Query Frame = 1


		  
Query: 44  STIEHIVLFNVKPT-ADATQLSAMVNGLNGLNTLPMVLYLTAGKLHRNRSSSLS-FTHML 103
           S +EH+VLF +     D+ ++++MVNG+N L  L  VL+L  G +HR  +++ S FTH+L
Sbjct: 3   SIVEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVL 62

Query: 104 HSRYRTKEDLANYSAHQDHLSVVRSSVLPICDDLLAVDWVAGNLEGPIGVKPGSAMRLQL 163
           HSRYR+KEDL  Y+ H DH+ VV+ S   I +D++AVDW+A      +    GS  ++ L
Sbjct: 63  HSRYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITL 122

Query: 164 VKLKEGLEETKKREVFDVISGLKEKTSGIEQLTYGENFSPARAKGFEICSIGVFGGIKEL 223
           +KLKE + E  K E+ +V   +KEK  GI+Q+T GENFSP R+K F I SI  F  + E+
Sbjct: 123 LKLKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEI 182

Query: 224 DSLESDSEIAKEKDKVRDSIDSLVIVDYVVPPS 255
           +++  D ++  + DK+RD +D  ++V++ VP S
Sbjct: 183 EAV--DDQMKLQNDKIRDYVDDTIVVEFNVPSS 209

The following BLAST results are available for this feature:

BLAST of Spo25304.1 vs. NCBI nr
BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
BLAST of Spo25304.1 vs. ExPASy Swiss-Prot
BLAST of Spo25304.1 vs. TAIR (Arabidopsis)

BLAST of Spo25304.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210984\|gb\|KNA16585.1\|	6.0e-140	100.	hypothetical protein SOVF_0878...	[more]
gi\|731372125\|ref\|XP_010666252.1\|	1.5e-90	67.8	PREDICTED: uncharacterized pro...	[more]
gi\|697175727\|ref\|XP_009596806.1\|	6.4e-65	52.3	PREDICTED: uncharacterized pro...	[more]
gi\|470102347\|ref\|XP_004287616.1\|	8.3e-65	54.6	PREDICTED: uncharacterized pro...	[more]
gi\|565350822\|ref\|XP_006342361.1\|	9.2e-64	55.9	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo25304.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RAR6_SPIOL	4.2e-140	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B8N6_BETVU	1.0e-90	67.8	Uncharacterized protein OS=Bet...	[more]
M1BQ55_SOLTU	6.4e-64	55.9	Uncharacterized protein OS=Sol...	[more]
K4CE22_SOLLC	1.1e-63	54.6	Uncharacterized protein OS=Sol...	[more]
A0A0V0I1Q7_SOLCH	2.1e-62	55.1	Putative ovule protein OS=Sola...	[more]

BLAST of Spo25304.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
UP3_ARATH	5.9e-63	49.6	Stress-response A/B barrel dom...	[more]
DABB1_ARATH	3.0e-38	42.2	Stress-response A/B barrel dom...	[more]

BLAST of Spo25304.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G31670.1	3.3e-64	49.6	Stress responsive alpha-beta b...	[more]
AT1G51360.1	1.7e-39	42.2	dimeric A/B barrel domainS-pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011008	Dimeric alpha-beta barrel	unknown	SSF54909	Dimeric alpha+beta barrel	coord: 43..144 score: 2.68E-18coord: 161..255 score: 4.4
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 46..141 score: 2.8E-18coord: 159..251 score: 5.5
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 161..251 score: 0.37coord: 46..142 score: 8.9
IPR013097	Stress responsive alpha-beta barrel	PROFILE	PS51502	S_R_A_B_BARREL	coord: 46..140 score: 22.329coord: 156..249 score: 13
None	No IPR available	GENE3D	3.30.70.900		coord: 45..142 score: 2.4E-22coord: 161..253 score: 5.6
None	No IPR available	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 9..256 score: 1.1
None	No IPR available	PANTHER	PTHR33178:SF3	SUBFAMILY NOT NAMED	coord: 9..256 score: 1.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005777	peroxisome