Spo25507.1 (mRNA) | SpinachBase

Overview


Name	Spo25507.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Double-stranded RNA-binding protein 1 (dsRNA-binding protein 1)
Location	SpoScf_02136 : 81045 .. 85190 (+)
Sequence length	2297

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAATTCCATCCCCCAAGGCCCCAACTCTCCCTAATTAATAACTCCTCTCTGTCCTATTTTTCTCATTTTTCTCTCTCCTCACTCTCACATCCTCCCTCCTAAACCCCACTCACCACCACTTCACTACCCAACAAACCTCCTTTTTCCTCCTCCCCCCACCCAACCCACCTCCACTACCCCTCCTCCTCCTCCCCCATTTTCTCTCTCCTTCCTTTCCAAAACCCTAAAACCTCTCCGATCTCACCCTTTCCATTCCAACAATTTCCGATTCCGCTGCGGCCGACAGTCAACCGCAGCGGCGGACTTAGTAGGAGTATCTTTCAATAACTCAGTTGTTGTCGTGGTGGATTTCGAAAACGGGGGAGAGAGAAAGATAGAGGAGTGATGTATAAGAACCAGCTACAAGAGCTGGCGCAGAGGAGTTGCTTCAACTTACCCTCCTACACTTGCATTCGGGAAGGTCCCGATCACGCGCCTAGGTTTAAGGCTATCGTTAACTTCAATGGCGAAAGCTTTGAGTCACCTCAGTACTGTTCTACACTTCGTCAAGCGGAGCACGCCGCCGCCGAAGTTGCGCTTAATTCTCTCTCCTCTCGCGGCCCTTCTCACTCTCTAGCCGCCCGCATCCTGGTTAGTTAATCTCTCACTTTCTCTCTCCTCTTTCTCGACTCTTCTAGAATGTTCTTGATCCCCGGATTTTTACGAGGATTTTGATATTTAACCCTAATTTTGGAGAGAGAGACCCGTTTTTTTTTTTTTTTGTTAAAAAATAAAATAATTTATGGGTATATGTTGATTGATCAAGCCTGAATTGGTCTGGGATTAAATGAATTGTATTTTTTTTCTTCAATTATTATTAGTTTACAAGTCGAACCGAATGTTATTGCAGAAGAGTAATTGAATTTTAGGAAATTAATTTCAGGTTGGTTTTATAATTTGGAGTATTTATTAGAATATTAATTTTCCTTTTGCCTATTTGGGTATATTTGTTGATCAATTTTTATTAACTCATGAGCTTAATGAGGGAAGTAAATTATTTTTTATCATTTAATTTTCCGACTTATAGTATGACGGATTGACGGGGCTTCAAGAGAGGGGGTTTCTTGTGCATTAAGGTGGGAATTTTCCGAAATTGAGGAACTGAAGAACTCTAGATGGTTCATTTGGTAATTAGTAATTCGGATTTGATAAGTTAATCGTCTAATGTAGTTGCATTAGTCCATAAGGTAGTTTGGCTACTGTCATTAGTGGTCTTTGCTGCTGTCATTTGATCAGTGCTCAATATACGAAACTATAATGGATTTCAGATCATGACGGAATTCATACCGAGCTACATTGTAGTTTGACGTTGAAAACAACCGTTGGTTAATTTGACATTGCCCCCCAAATTTGATGGACTGGCGTTGTGTGGGTTATATGGGCGTAATATATACAATGTGGATGTTTCTAGCCATGAGATACATACTCCGTGATGAACTGTTGTTTATGATTGTATTGTTGGGAAAAGTTCCGATGTATGTTAAACTTGTGGTAACTTGGATGCTATTGGTGTGTGGAAGGAAATACATACGATCTTTTTATGGATTGCAAAGAGGATGAGTAATTGGAAAGCCTGAAACAACCCACATTTTTGTTTAGTTCCGTGGCGGCAAGTATTTGAATTCCAATGAACTAAGTTAAATGTCTTCATATGCAGTTATCTCAATTTTTTTTTTATAGTTGGTGAAGTTGCAAACTGCTCTCTTTCCCAACTCTTCTTTTTCTTTCTTCTCCACATTCATGCAGCGTGTTAGGATGCAAGTCCATTCTTTGTTTTGGGTTGTAATTTTGATTACTTTGTTAATTGTTTTAATTTTCTTATTTTAATATTAAGGATGAGACAGGGGTTTACAAAAACCTTTTACAAGAGATTTCACAAAGAGTTGGAGCCCCATTGCCGCACTACACAACTTACAGATCAGGTCTAGGGCACCAACCTGTTTTCACTGGTAAAGTAGAACTTGCTGGTATCATATTCACAGGGGAGGCAGCCAAAAATAAAAAACAGGCAGAGAAAAATGCAGCTTTGGCTGCTTGGCAATCTCTTAAACAATGTAAGTTTTTTATTTTTATTTTTTATAATCAAATTAATTCATTGATAAAAAGTCATACGACCTCTACATAAAAAGTTGAATCTAACAAATACATAATAGTTGAATTGAATCATATAAAAAACTTCCTTTCACCATAGATAGGATTGTTGTATATCGAACATTCTTTATACCCTCTTTTATATGGTTGTGATTTACGGTCTTCTTCAACGAGGGGTCTATAGATCTGTTGTAGTCAAGATAAATATGATTTTCCTGTGATTGTAGTCGAAAGATTGACCTCGTTTTAGACTCCGCACAAATCTTTACCAAAGGAACAACTTGTCCTACACACAAAACTTAACTAGAATCAAACCCACCATAGGGGTATTTACTACACTTCAAATATGAGAGATTGAATTAAAAAAGTTCCTCATATTGACCTTTACACAGCTCCTTCTGATATGTAATTTTTTGTTTTATCGATTTCATTTTCTGGTCTCGTTAATCTAGGCTGTCTTTCACAGTATTACAAAAAACTTCTTCACTATTAGACGACTTTAGTGGTCAATTTCTATGAAGAGGTGCTCTGAAATGGTGTTAAGTATTGATCTAGTGTTATCTGAACAGTGGCACAGCAGTCTGGGAGCTTGTCTACGGAGCAAGAAAACAATGACGAACTTGAGCAGGTGACTATAGCCCGAGCATTGTTGAGTTACCGATTGAGGGAGAGAATGACAAGTGCATCAAGTAAACCGTTGCCATTCCCTCAAACATTCCCGATCCAGAATCCAAGACCTTCGAGCCCACAGCGTCGTCCAGTGACCGCATCCAAGATTCTTCCGCTTATCTTCCCAAAGAAGACACCGCCTCGAGTGCGGCCCTTGTCATTTACATTATCTGATAATGTGGGGCAATCATCCCAGTCCCAGATTCCAGAATCTAGAGGAGCTCATTCTCAGTCCTCTCAGAGATACTTAGGTATGGGAGCACCTCCATACATTCCAATCCGGCATGTGCGATCACCGTGCCATGGTATTGCACCGCCAGTGACTATTAGGAATTCAGTGCCTTGCTACTCTGCACCACCTATTCCGCGCTCGTCAGCTGCTGCTCCTCCGGGGATGAGAACGGCTCCACCTGTGCGGATTGCACCGCCGGTATGCATTAGGCAAAGTATCCCAGTCTTCTCTGCTCCACCATATCCCAAGGAAGACCTGTCAACTGTTACTCCTCCAGAGTCGAACAAAGTGGAAGCAGTTCAGGCATCAACAGGAAGGGAATCTCAAGAATGTAATAAATCTGATCCTATTGTGAAACCTCTTCCCCCATACACCTTTTGCCCTACTGTGACAAGGGCTTCCCCTGTTCGAATCGCACCACCTGTCCGTATTAGACAGGCTATTCCTGTTTGTGCTGCCCCACCACCGAAAAAAGATGGTCCTATGGAGGCAAAAGATCCTGGTAGGGAGGTGGATTTTGAAGATAAAACTCAGAACTCAGAAGCAGTAGAGAAGTTGGAACAGCTCAAACTCTGAAATTGCTTGTAAGGAGGAATGTAGATCTCTAGGAGTATCACATCAGGGAGTATGATTTTGATCTTTGGTTGTCGATGCCATCTTGTATGAATGTCCACCCCCTTTCTTTTTTTCTTCACCCCTCTTTTAGTTTTCTTGTATTTGAGTTGGCACATCACATCATCGATGTTTCCCTATAGTTATTATTATATCCCTTGAAACTAGTAGTATATTAGCAACTTAGTGTTAAATTGGCTCAGTAGCCGAGTATCGAAAACGTTTACCATACTGTACCTGGTGTGGTGCTTTTACAATTTTGTCAGCATTACCCAAGTAGCTTCCGTAGTCTTCCTTCTAGGCTCTGTTTGATAGGGCGTAAAACGTTTTCGTGGAAAACGATTTTTCCCTTTTCAATCATTTTACGTTGTGCTCGATCTGTACTACTGTTACGCAAGAATGCAACGCCTCTAGGTGCTGCTAGCCCTTATTGGGTGTTGCCTTTGGTATCACTTACTCCACCTTTCACTCTTTTTGGTAGTGGATGGTTCACTTACTCT

mRNA sequence

ATTCAATTCCATCCCCCAAGGCCCCAACTCTCCCTAATTAATAACTCCTCTCTGTCCTATTTTTCTCATTTTTCTCTCTCCTCACTCTCACATCCTCCCTCCTAAACCCCACTCACCACCACTTCACTACCCAACAAACCTCCTTTTTCCTCCTCCCCCCACCCAACCCACCTCCACTACCCCTCCTCCTCCTCCCCCATTTTCTCTCTCCTTCCTTTCCAAAACCCTAAAACCTCTCCGATCTCACCCTTTCCATTCCAACAATTTCCGATTCCGCTGCGGCCGACAGTCAACCGCAGCGGCGGACTTAGTAGGAGTATCTTTCAATAACTCAGTTGTTGTCGTGGTGGATTTCGAAAACGGGGGAGAGAGAAAGATAGAGGAGTGATGTATAAGAACCAGCTACAAGAGCTGGCGCAGAGGAGTTGCTTCAACTTACCCTCCTACACTTGCATTCGGGAAGGTCCCGATCACGCGCCTAGGTTTAAGGCTATCGTTAACTTCAATGGCGAAAGCTTTGAGTCACCTCAGTACTGTTCTACACTTCGTCAAGCGGAGCACGCCGCCGCCGAAGTTGCGCTTAATTCTCTCTCCTCTCGCGGCCCTTCTCACTCTCTAGCCGCCCGCATCCTGGATGAGACAGGGGTTTACAAAAACCTTTTACAAGAGATTTCACAAAGAGTTGGAGCCCCATTGCCGCACTACACAACTTACAGATCAGGTCTAGGGCACCAACCTGTTTTCACTGGTAAAGTAGAACTTGCTGGTATCATATTCACAGGGGAGGCAGCCAAAAATAAAAAACAGGCAGAGAAAAATGCAGCTTTGGCTGCTTGGCAATCTCTTAAACAATTGGCACAGCAGTCTGGGAGCTTGTCTACGGAGCAAGAAAACAATGACGAACTTGAGCAGGTGACTATAGCCCGAGCATTGTTGAGTTACCGATTGAGGGAGAGAATGACAAGTGCATCAAGTAAACCGTTGCCATTCCCTCAAACATTCCCGATCCAGAATCCAAGACCTTCGAGCCCACAGCGTCGTCCAGTGACCGCATCCAAGATTCTTCCGCTTATCTTCCCAAAGAAGACACCGCCTCGAGTGCGGCCCTTGTCATTTACATTATCTGATAATGTGGGGCAATCATCCCAGTCCCAGATTCCAGAATCTAGAGGAGCTCATTCTCAGTCCTCTCAGAGATACTTAGGTATGGGAGCACCTCCATACATTCCAATCCGGCATGTGCGATCACCGTGCCATGGTATTGCACCGCCAGTGACTATTAGGAATTCAGTGCCTTGCTACTCTGCACCACCTATTCCGCGCTCGTCAGCTGCTGCTCCTCCGGGGATGAGAACGGCTCCACCTGTGCGGATTGCACCGCCGGTATGCATTAGGCAAAGTATCCCAGTCTTCTCTGCTCCACCATATCCCAAGGAAGACCTGTCAACTGTTACTCCTCCAGAGTCGAACAAAGTGGAAGCAGTTCAGGCATCAACAGGAAGGGAATCTCAAGAATGTAATAAATCTGATCCTATTGTGAAACCTCTTCCCCCATACACCTTTTGCCCTACTGTGACAAGGGCTTCCCCTGTTCGAATCGCACCACCTGTCCGTATTAGACAGGCTATTCCTGTTTGTGCTGCCCCACCACCGAAAAAAGATGGTCCTATGGAGGCAAAAGATCCTGGTAGGGAGGTGGATTTTGAAGATAAAACTCAGAACTCAGAAGCAGTAGAGAAGTTGGAACAGCTCAAACTCTGAAATTGCTTGTAAGGAGGAATGTAGATCTCTAGGAGTATCACATCAGGGAGTATGATTTTGATCTTTGGTTGTCGATGCCATCTTGTATGAATGTCCACCCCCTTTCTTTTTTTCTTCACCCCTCTTTTAGTTTTCTTGTATTTGAGTTGGCACATCACATCATCGATGTTTCCCTATAGTTATTATTATATCCCTTGAAACTAGTAGTATATTAGCAACTTAGTGTTAAATTGGCTCAGTAGCCGAGTATCGAAAACGTTTACCATACTGTACCTGGTGTGGTGCTTTTACAATTTTGTCAGCATTACCCAAGTAGCTTCCGTAGTCTTCCTTCTAGGCTCTGTTTGATAGGGCGTAAAACGTTTTCGTGGAAAACGATTTTTCCCTTTTCAATCATTTTACGTTGTGCTCGATCTGTACTACTGTTACGCAAGAATGCAACGCCTCTAGGTGCTGCTAGCCCTTATTGGGTGTTGCCTTTGGTATCACTTACTCCACCTTTCACTCTTTTTGGTAGTGGATGGTTCACTTACTCT

Coding sequence (CDS)

ATGTATAAGAACCAGCTACAAGAGCTGGCGCAGAGGAGTTGCTTCAACTTACCCTCCTACACTTGCATTCGGGAAGGTCCCGATCACGCGCCTAGGTTTAAGGCTATCGTTAACTTCAATGGCGAAAGCTTTGAGTCACCTCAGTACTGTTCTACACTTCGTCAAGCGGAGCACGCCGCCGCCGAAGTTGCGCTTAATTCTCTCTCCTCTCGCGGCCCTTCTCACTCTCTAGCCGCCCGCATCCTGGATGAGACAGGGGTTTACAAAAACCTTTTACAAGAGATTTCACAAAGAGTTGGAGCCCCATTGCCGCACTACACAACTTACAGATCAGGTCTAGGGCACCAACCTGTTTTCACTGGTAAAGTAGAACTTGCTGGTATCATATTCACAGGGGAGGCAGCCAAAAATAAAAAACAGGCAGAGAAAAATGCAGCTTTGGCTGCTTGGCAATCTCTTAAACAATTGGCACAGCAGTCTGGGAGCTTGTCTACGGAGCAAGAAAACAATGACGAACTTGAGCAGGTGACTATAGCCCGAGCATTGTTGAGTTACCGATTGAGGGAGAGAATGACAAGTGCATCAAGTAAACCGTTGCCATTCCCTCAAACATTCCCGATCCAGAATCCAAGACCTTCGAGCCCACAGCGTCGTCCAGTGACCGCATCCAAGATTCTTCCGCTTATCTTCCCAAAGAAGACACCGCCTCGAGTGCGGCCCTTGTCATTTACATTATCTGATAATGTGGGGCAATCATCCCAGTCCCAGATTCCAGAATCTAGAGGAGCTCATTCTCAGTCCTCTCAGAGATACTTAGGTATGGGAGCACCTCCATACATTCCAATCCGGCATGTGCGATCACCGTGCCATGGTATTGCACCGCCAGTGACTATTAGGAATTCAGTGCCTTGCTACTCTGCACCACCTATTCCGCGCTCGTCAGCTGCTGCTCCTCCGGGGATGAGAACGGCTCCACCTGTGCGGATTGCACCGCCGGTATGCATTAGGCAAAGTATCCCAGTCTTCTCTGCTCCACCATATCCCAAGGAAGACCTGTCAACTGTTACTCCTCCAGAGTCGAACAAAGTGGAAGCAGTTCAGGCATCAACAGGAAGGGAATCTCAAGAATGTAATAAATCTGATCCTATTGTGAAACCTCTTCCCCCATACACCTTTTGCCCTACTGTGACAAGGGCTTCCCCTGTTCGAATCGCACCACCTGTCCGTATTAGACAGGCTATTCCTGTTTGTGCTGCCCCACCACCGAAAAAAGATGGTCCTATGGAGGCAAAAGATCCTGGTAGGGAGGTGGATTTTGAAGATAAAACTCAGAACTCAGAAGCAGTAGAGAAGTTGGAACAGCTCAAACTCTGA

Protein sequence

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAAAEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFTGKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIARALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRNSVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPESNKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAPPPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25507	Spo25507	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25507.1	Spo25507.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25507.1.exon.1	Spo25507.1.exon.1	exon
Spo25507.1.exon.2	Spo25507.1.exon.2	exon
Spo25507.1.exon.3	Spo25507.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25507.1.utr5p.1	Spo25507.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25507.1.CDS.1	Spo25507.1.CDS.1	CDS
Spo25507.1.CDS.2	Spo25507.1.CDS.2	CDS
Spo25507.1.CDS.3	Spo25507.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25507.1.utr3p.1	Spo25507.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo25507.1 vs. NCBI nr
Match: gi|902205145|gb|KNA15098.1| (hypothetical protein SOVF_101240 [Spinacia oleracea])

HSP 1 Score: 891.0 bits (2301), Expect = 9.000e-256
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT
Sbjct: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR
Sbjct: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180

Query: 181 ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP 240
           ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP
Sbjct: 181 ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP 240

Query: 241 LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN 300
           LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN
Sbjct: 241 LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN 300

Query: 301 SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPES 360
           SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPES
Sbjct: 301 SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPES 360

Query: 361 NKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAP 420
           NKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAP
Sbjct: 361 NKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAP 420

Query: 421 PPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL 458
           PPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL
Sbjct: 421 PPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL 457

[Close]

BLAST of Spo25507.1 vs. NCBI nr
Match: gi|731356180|ref|XP_010689537.1| (PREDICTED: double-stranded RNA-binding protein 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 712.2 bits (1837), Expect = 5.700e-202
Identity = 384/465 (82.58%), Postives = 409/465 (87.96%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT
Sbjct: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           GKVELAGIIFTGE AKNKKQAEKNAALA+WQSLKQLA QSGS S+EQEN DELEQVTIAR
Sbjct: 121 GKVELAGIIFTGEPAKNKKQAEKNAALASWQSLKQLAHQSGSSSSEQENTDELEQVTIAR 180

Query: 181 ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP 240
           ALL YRLRERMT+ASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLI PKKT PRVRP
Sbjct: 181 ALLRYRLRERMTTASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLICPKKTLPRVRP 240

Query: 241 LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN 300
           LS+  SDN   SS SQIPESRG+    SQR+ G+GAPPYIP+RHVR+PCHGIAPPVTIRN
Sbjct: 241 LSYVGSDNSVSSSHSQIPESRGS---QSQRFPGLGAPPYIPMRHVRAPCHGIAPPVTIRN 300

Query: 301 SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSA-PPYPKEDLSTVTPPE 360
           ++PCYSAPP+PRSSA APP MRTAPPVRIAPPVCIRQS+PVFSA PP PKEDLSTV   E
Sbjct: 301 AIPCYSAPPVPRSSAPAPPVMRTAPPVRIAPPVCIRQSVPVFSAPPPLPKEDLSTVKHLE 360

Query: 361 SNK----VEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIP 420
           SNK    VEAV+ STG+ESQE  K++P+VKPLP     P+VTRA P R AP V IRQAIP
Sbjct: 361 SNKASDEVEAVEFSTGKESQESKKTEPVVKPLPLANIGPSVTRAFPTRTAPSVCIRQAIP 420

Query: 421 VCAAPPPKK---DGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL 458
           V AAPP KK     PME +D G ++   ++TQ+SEAVEKLE LKL
Sbjct: 421 VFAAPPVKKVESSSPMEPRDSGTKMASVEETQDSEAVEKLELLKL 462

[Close]

BLAST of Spo25507.1 vs. NCBI nr
Match: gi|565346281|ref|XP_006340194.1| (PREDICTED: double-stranded RNA-binding protein 2 [Solanum tuberosum])

HSP 1 Score: 465.7 bits (1197), Expect = 9.300e-128
Identity = 257/382 (67.28%), Postives = 299/382 (78.27%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGESFESP YCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYVCIREGPDHAPRFKAVVNFNGESFESPHYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALN+LS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTTYRSGLGHQPVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTGE AKNKKQAEKNAALAAW SLKQLAQQ  SLS+E ENNDE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAQQDASLSSELENNDEQEQIRIAR 180

Query: 181 ALLSYRLRERMTSASS--KPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           ALL+YRL+E++  A S   P+PF + FP+ +PRPSSPQR  VT SKILPLI P KT  R 
Sbjct: 181 ALLNYRLKEQLEMAKSGKVPIPFQKKFPMPSPRPSSPQRPAVTTSKILPLICP-KTVNRY 240

Query: 241 RPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIR-HVRSPCHGIAPPVT 300
           R  S T++D+    SQ  +P+S+ + S+       +   PY+P+R + R+P HGIAPPVT
Sbjct: 241 RSSSTTINDSHSSLSQ-PLPQSQTSSSEGRTVSTRISPAPYMPVRQYTRTPYHGIAPPVT 300

Query: 301 IRNSVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDL----S 360
           IR +VP +SAPP P+ +   P  M  A PVR+APPVCIRQ+IPV++APP  KE +    +
Sbjct: 301 IRTAVPVFSAPPRPQPT-GCPAQMMQARPVRVAPPVCIRQAIPVYAAPPVKKETVAHATT 360

Query: 361 TVTPPESNKVEAVQASTGRESQ 376
           T++ P +   E V  +T   S+
Sbjct: 361 TLSRPSAQPEETVARATTAPSR 379

[Close]

BLAST of Spo25507.1 vs. NCBI nr
Match: gi|147853140|emb|CAN80689.1| (hypothetical protein VITISV_005501 [Vitis vinifera])

HSP 1 Score: 462.6 bits (1189), Expect = 7.900e-127
Identity = 252/359 (70.19%), Postives = 287/359 (79.94%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESP YC+TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTT+RSGLGH PVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTGE AKNKKQAEKNAA+AAW SLKQLA+++ S S+E ENNDELEQ+TIAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 181 ALLSYRLRERMTSASSK--PLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           ALL+YRL+E+M  A+S    L FP+ FPIQN R  SPQ  PV  SKILPLI  +KTPPR 
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLIC-QKTPPRN 240

Query: 241 RPLSFTLSDNVGQSSQ--SQIPESR----GAHSQSSQRYLGMGAPPYIPIRHVRSPCHGI 300
           RP S T +D+  Q  Q  + +P S+       +   QR+   GA PY+PIR  R+P HGI
Sbjct: 241 RPPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGI 300

Query: 301 APPVTIRNSVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKED 352
           APPVTIRN+VP +SAPP     +  PP +  AP +RIAPPVC+RQ++PVF+APP  KED
Sbjct: 301 APPVTIRNAVPVFSAPP-----SGLPPQVIRAPHMRIAPPVCVRQAVPVFAAPPVRKED 353

[Close]

BLAST of Spo25507.1 vs. NCBI nr
Match: gi|1012357349|gb|KYP68534.1| (Ribonuclease 3 [Cajanus cajan])

HSP 1 Score: 462.6 bits (1189), Expect = 7.900e-127
Identity = 281/491 (57.23%), Postives = 329/491 (67.01%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESP YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLS R PSHSLAARILDETGVYKNLLQEI+QRVGAPLPHY T+RSGLGH PVFT
Sbjct: 61  AEVALNSLSHRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPHYFTFRSGLGHLPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI+FTGE AKNKKQAEKNAA+AAW SLKQLA+++   STE ENNDELEQ+TIAR
Sbjct: 121 GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETAKSSTEPENNDELEQITIAR 180

Query: 181 ALLSYRLRERMT-SASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVR 240
           ALL+YRL+E+++ S  + P+PFP+ F IQNPRP+SPQ  P   SKILPLI  +K  PR R
Sbjct: 181 ALLNYRLKEKISMSNPNAPIPFPKMFQIQNPRPTSPQPPPAATSKILPLIC-QKAAPRNR 240

Query: 241 PL-----SFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAP 300
            L     +  +SDN      S  P+SRG       ++   GA PY+PIR +R PCHG+AP
Sbjct: 241 HLVAASPAPAVSDNSAMPQLSATPDSRGIR---RPKFPAAGAAPYVPIRQMRPPCHGMAP 300

Query: 301 PVTIRNSVPCYSAPPIPRSSAAAPPGMRT--APPVRIAPPVCIRQSIPVFSAPPYPKE-- 360
           PVTIR ++P +S PP P ++ AA    +   AP VR+APPV IRQ++PVF+APP  K+  
Sbjct: 301 PVTIRTAIPVFSPPPPPAAATAAAVSHQVLRAPSVRVAPPVTIRQAVPVFAAPPVRKDEP 360

Query: 361 -----DLSTVTPPESNKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIA 420
                D      P   K E V               P++K +P       V  A  VR  
Sbjct: 361 IPIIKDAPVFAAPPIRKDEPV---------------PVLKDVP-------VFAAPQVRKD 420

Query: 421 PPVRIRQAIPVCAAPP---------PKKDGP------MEAKDPGREVDFEDKT----QNS 458
             V I + +PV AAPP         PK D P      +E K P +  + E KT      S
Sbjct: 421 EAVPILKDVPVFAAPPVRTDEPVRSPKDDPPTISAPSLEDKLPAQTPETETKTGTISPES 465

[Close]

BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6H9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101240 PE=4 SV=1)

HSP 1 Score: 891.0 bits (2301), Expect = 6.300e-256
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT
Sbjct: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR
Sbjct: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180

Query: 181 ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP 240
           ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP
Sbjct: 181 ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP 240

Query: 241 LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN 300
           LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN
Sbjct: 241 LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN 300

Query: 301 SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPES 360
           SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPES
Sbjct: 301 SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDLSTVTPPES 360

Query: 361 NKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAP 420
           NKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAP
Sbjct: 361 NKVEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIPVCAAP 420

Query: 421 PPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL 458
           PPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL
Sbjct: 421 PPKKDGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL 457

[Close]

BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLN9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g207820 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 4.000e-202
Identity = 384/465 (82.58%), Postives = 409/465 (87.96%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT
Sbjct: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           GKVELAGIIFTGE AKNKKQAEKNAALA+WQSLKQLA QSGS S+EQEN DELEQVTIAR
Sbjct: 121 GKVELAGIIFTGEPAKNKKQAEKNAALASWQSLKQLAHQSGSSSSEQENTDELEQVTIAR 180

Query: 181 ALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRVRP 240
           ALL YRLRERMT+ASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLI PKKT PRVRP
Sbjct: 181 ALLRYRLRERMTTASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLICPKKTLPRVRP 240

Query: 241 LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRN 300
           LS+  SDN   SS SQIPESRG+    SQR+ G+GAPPYIP+RHVR+PCHGIAPPVTIRN
Sbjct: 241 LSYVGSDNSVSSSHSQIPESRGS---QSQRFPGLGAPPYIPMRHVRAPCHGIAPPVTIRN 300

Query: 301 SVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSA-PPYPKEDLSTVTPPE 360
           ++PCYSAPP+PRSSA APP MRTAPPVRIAPPVCIRQS+PVFSA PP PKEDLSTV   E
Sbjct: 301 AIPCYSAPPVPRSSAPAPPVMRTAPPVRIAPPVCIRQSVPVFSAPPPLPKEDLSTVKHLE 360

Query: 361 SNK----VEAVQASTGRESQECNKSDPIVKPLPPYTFCPTVTRASPVRIAPPVRIRQAIP 420
           SNK    VEAV+ STG+ESQE  K++P+VKPLP     P+VTRA P R AP V IRQAIP
Sbjct: 361 SNKASDEVEAVEFSTGKESQESKKTEPVVKPLPLANIGPSVTRAFPTRTAPSVCIRQAIP 420

Query: 421 VCAAPPPKK---DGPMEAKDPGREVDFEDKTQNSEAVEKLEQLKL 458
           V AAPP KK     PME +D G ++   ++TQ+SEAVEKLE LKL
Sbjct: 421 VFAAPPVKKVESSSPMEPRDSGTKMASVEETQDSEAVEKLELLKL 462

[Close]

BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
Match: A0A0V0I9G8_SOLCH (Putative double-stranded RNA-binding protein 2-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.000e-128
Identity = 259/382 (67.80%), Postives = 300/382 (78.53%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGESFESP YCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYVCIREGPDHAPRFKAVVNFNGESFESPHYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALN+LS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTTYRSGLGHQPVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTGE AKNKKQAEKNAALAAW SLKQLAQQ  SLS+E ENNDE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAQQDASLSSELENNDEQEQIRIAR 180

Query: 181 ALLSYRLRERMTSASS--KPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           ALL+YRL+E++  A S   P+PF + FPI +PRPSSPQR  VT SKILPLI P KT  R 
Sbjct: 181 ALLNYRLKEQLEMAKSGKVPIPFQKKFPIPSPRPSSPQRPAVTTSKILPLICP-KTVNRY 240

Query: 241 RPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIR-HVRSPCHGIAPPVT 300
           R  S T++D+    SQ  +P+S+ + S+       +   PY+P+R + R+P HGIAPPVT
Sbjct: 241 RSSSTTINDSHSSLSQ-PLPQSQTSSSECRTVSTRISPAPYMPVRQYTRTPYHGIAPPVT 300

Query: 301 IRNSVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDL----S 360
           IR +VP +SAPP P+S+   P  M  A PVR+APPVCIRQ+IPV++APP  KE +    +
Sbjct: 301 IRTAVPVFSAPPRPQST-GCPAQMMQARPVRVAPPVCIRQAIPVYAAPPVKKETVAHATT 360

Query: 361 TVTPPESNKVEAVQASTGRESQ 376
           T++ P +   E V  +T   S+
Sbjct: 361 TLSRPSAQPEETVARATTAPSR 379

[Close]

BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
Match: M1AE38_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008053 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 6.500e-128
Identity = 257/382 (67.28%), Postives = 299/382 (78.27%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA+VNFNGESFESP YCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYVCIREGPDHAPRFKAVVNFNGESFESPHYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALN+LS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTTYRSGLGHQPVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTGE AKNKKQAEKNAALAAW SLKQLAQQ  SLS+E ENNDE EQ+ IAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAALAAWSSLKQLAQQDASLSSELENNDEQEQIRIAR 180

Query: 181 ALLSYRLRERMTSASS--KPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           ALL+YRL+E++  A S   P+PF + FP+ +PRPSSPQR  VT SKILPLI P KT  R 
Sbjct: 181 ALLNYRLKEQLEMAKSGKVPIPFQKKFPMPSPRPSSPQRPAVTTSKILPLICP-KTVNRY 240

Query: 241 RPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIR-HVRSPCHGIAPPVT 300
           R  S T++D+    SQ  +P+S+ + S+       +   PY+P+R + R+P HGIAPPVT
Sbjct: 241 RSSSTTINDSHSSLSQ-PLPQSQTSSSEGRTVSTRISPAPYMPVRQYTRTPYHGIAPPVT 300

Query: 301 IRNSVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKEDL----S 360
           IR +VP +SAPP P+ +   P  M  A PVR+APPVCIRQ+IPV++APP  KE +    +
Sbjct: 301 IRTAVPVFSAPPRPQPT-GCPAQMMQARPVRVAPPVCIRQAIPVYAAPPVKKETVAHATT 360

Query: 361 TVTPPESNKVEAVQASTGRESQ 376
           T++ P +   E V  +T   S+
Sbjct: 361 TLSRPSAQPEETVARATTAPSR 379

[Close]

BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
Match: A5B1V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 5.500e-127
Identity = 252/359 (70.19%), Postives = 287/359 (79.94%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESP YC+TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALNSLS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTT+RSGLGH PVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTGE AKNKKQAEKNAA+AAW SLKQLA+++ S S+E ENNDELEQ+TIAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 181 ALLSYRLRERMTSASSK--PLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           ALL+YRL+E+M  A+S    L FP+ FPIQN R  SPQ  PV  SKILPLI  +KTPPR 
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLIC-QKTPPRN 240

Query: 241 RPLSFTLSDNVGQSSQ--SQIPESR----GAHSQSSQRYLGMGAPPYIPIRHVRSPCHGI 300
           RP S T +D+  Q  Q  + +P S+       +   QR+   GA PY+PIR  R+P HGI
Sbjct: 241 RPPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGI 300

Query: 301 APPVTIRNSVPCYSAPPIPRSSAAAPPGMRTAPPVRIAPPVCIRQSIPVFSAPPYPKED 352
           APPVTIRN+VP +SAPP     +  PP +  AP +RIAPPVC+RQ++PVF+APP  KED
Sbjct: 301 APPVTIRNAVPVFSAPP-----SGLPPQVIRAPHMRIAPPVCVRQAVPVFAAPPVRKED 353

[Close]

BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
Match: DRB2_ARATH (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 6.500e-121
Identity = 241/359 (67.13%), Postives = 280/359 (77.99%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESPQYCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALN+LS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTT+RSGLGHQPVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTG+ AKNKKQAEKNAA+AAW SLKQLA+++ S   E EN DELEQV IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLSYRLRERM--TSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           AL++YR++E +   S+SS P+PF + F +QN RP+SPQ  P T S+ILP I PK+ P R 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQ-PSRS 240

Query: 241 RPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTI 300
              S   +  + +   + + ESR ++ +  QR+     PPY+P+R  RS CHG+APPVTI
Sbjct: 241 SRSSLAATSGIDRIMAAAL-ESR-SYQRPQQRFAN---PPYVPMRQFRSQCHGMAPPVTI 300

Query: 301 RNSVPCYSAPPIP----------RSSAAAPPGMRTAPPVRIAPPVCIRQSIPVF-SAPP 347
           R +VP +SAPP+P           SS   P  MRTAPPVRIAPPV IR ++PVF SAPP
Sbjct: 301 RTAVPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPP 353

[Close]

BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
Match: DRB6_ORYSJ (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.200e-105
Identity = 215/348 (61.78%), Postives = 253/348 (72.70%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLP+YTC+REGPDHAPRFKA VNFNGE FESP + +TLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVAL +L+ RGPS+SLAARILDETGVYKNLLQE++QRVGAPLP YTT RSGLGH PVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
             VELAGI FTG+ AKNKKQAEKNAA AAW SL+QL +Q  S S E E+NDE EQ+ IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLSYRLRERMTSASS-KPLPFPQTFPIQNPRPSS-PQRRPVTASKILPLIFPKKTPPRV 240
           ALL+YRL+E+M  A++    PFP+ FP+Q  R ++ PQ    + SKILPL  PK    R 
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSN-SRS 240

Query: 241 RPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTI 300
           RP S   SD     + SQ P           R+    A PY+P+ H R PCH +APPVT+
Sbjct: 241 RPESPAASD-----AASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTV 300

Query: 301 RNSVPCYSAPPIPRSSAAA---PPGMRTAPPVRIAPPVCIRQSIPVFS 344
           R S+P +SAPP+P   A     PP M   PP+R+A PV IR + P+F+
Sbjct: 301 RTSIPVFSAPPLPPPGARTQQLPPLMSHPPPIRMASPVRIRPAPPLFT 342

[Close]

BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
Match: DRB2_ORYSJ (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.300e-64
Identity = 159/339 (46.90%), Postives = 191/339 (56.34%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKA VNFNGE+FESP +CSTLR AEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALN LS RGPS SLAA++LDETG+YKNLLQE + R G  LP YTT RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQL---AQQSGSLSTEQENNDELEQVT 180
             VELAG+ FTG   K KKQA+KNAA+AAW  LKQL    + S S      ++D+ EQ+ 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLSYRLRERMTSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPR 240
           +AR L S       T+    P    +      P    P      AS    L   K   P 
Sbjct: 181 VARTLASL----NQTNGGKTPQQKEKQQSSNRPSSRRPSYPKSNASFYGRLHLQKHAYPS 240

Query: 241 VRP--LSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPP 300
           V P    + +   V  + Q         H          G PP   + H+  P  G    
Sbjct: 241 VPPEQAMYHMWHQVQATQQK-------PHFPMVPTMGSTGFPPPPTVLHMYPPPRGQFTM 300

Query: 301 VTIRNS---VPCY--SAPPIPRSSAAAPPGMRTAPPVRI 330
            + ++    +PCY  ++P +PR  +  P       P+ +
Sbjct: 301 PSSQDGLGLIPCYPEASPVLPRYFSPYPASFVPRRPLPV 328

[Close]

BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
Match: DRB3_ARATH (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.300e-64
Identity = 126/189 (66.67%), Postives = 148/189 (78.31%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA VNFNGE FESP YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVAL++LSS+GPS SL AR+LDETG+YKNLLQE + R G  LP YT+ RSG GH P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
             VELAG+ F GE+AK KKQAEKNAA+AAW SL+++ +       +    +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLSYRLRE 190
            L  +R +E
Sbjct: 181 VLSRFRPKE 183

[Close]

BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
Match: DRB5_ARATH (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.600e-63
Identity = 166/348 (47.70%), Postives = 207/348 (59.48%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESP YCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEV+LN LSSR PS SL A+ILDETG+YKNLLQE + R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
             VELAG+ FTGE+AK KKQAEKNAA+AAW SLK+++    SL ++ E   E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMS----SLDSQDE---EKEQEAVAR 180

Query: 181 ALLSYRLRE-----------RMTSA--SSKPLPFPQ-----------------TFPIQNP 240
            L  ++ +E           R TS   S+K L   +                 + P Q+ 
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 RPS----SPQRRPVTASKILPLIFPKKTPPRVRPLSFTLSDNVGQSSQSQIPE-----SR 300
             S     P   P  +SKILP I   K        + T ++ +  +S++++ E     S+
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMI--NSKAKVNETSTRLSK 300

Query: 301 GAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRNSVPCYSAPP 310
                   RY  +G     P        + +AP V +R+ +P ++APP
Sbjct: 301 QMPFSDMNRYNFVGGCSVNP--------YSLAPAVQMRSVIPVFAAPP 331

[Close]

BLAST of Spo25507.1 vs. TAIR (Arabidopsis)
Match: AT2G28380.1 (dsRNA-binding protein 2)

HSP 1 Score: 435.6 bits (1119), Expect = 3.700e-122
Identity = 241/359 (67.13%), Postives = 280/359 (77.99%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESPQYCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVALN+LS+RGPSHSLAARILDETGVYKNLLQEI+QRVGAPLP YTT+RSGLGHQPVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
           G VELAGI FTG+ AKNKKQAEKNAA+AAW SLKQLA+++ S   E EN DELEQV IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLSYRLRERM--TSASSKPLPFPQTFPIQNPRPSSPQRRPVTASKILPLIFPKKTPPRV 240
           AL++YR++E +   S+SS P+PF + F +QN RP+SPQ  P T S+ILP I PK+ P R 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQ-PSRS 240

Query: 241 RPLSFTLSDNVGQSSQSQIPESRGAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTI 300
              S   +  + +   + + ESR ++ +  QR+     PPY+P+R  RS CHG+APPVTI
Sbjct: 241 SRSSLAATSGIDRIMAAAL-ESR-SYQRPQQRFAN---PPYVPMRQFRSQCHGMAPPVTI 300

Query: 301 RNSVPCYSAPPIP----------RSSAAAPPGMRTAPPVRIAPPVCIRQSIPVF-SAPP 347
           R +VP +SAPP+P           SS   P  MRTAPPVRIAPPV IR ++PVF SAPP
Sbjct: 301 RTAVPVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPP 353

[Close]

BLAST of Spo25507.1 vs. TAIR (Arabidopsis)
Match: AT3G26932.1 (dsRNA-binding protein 3)

HSP 1 Score: 246.1 bits (627), Expect = 4.100e-65
Identity = 126/189 (66.67%), Postives = 148/189 (78.31%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA VNFNGE FESP YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEVAL++LSS+GPS SL AR+LDETG+YKNLLQE + R G  LP YT+ RSG GH P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
             VELAG+ F GE+AK KKQAEKNAA+AAW SL+++ +       +    +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLSYRLRE 190
            L  +R +E
Sbjct: 181 VLSRFRPKE 183

[Close]

BLAST of Spo25507.1 vs. TAIR (Arabidopsis)
Match: AT5G41070.1 (dsRNA-binding protein 5)

HSP 1 Score: 245.0 bits (624), Expect = 9.100e-65
Identity = 166/348 (47.70%), Postives = 207/348 (59.48%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA VNFNGE FESP YCSTLRQAEHAA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           AEV+LN LSSR PS SL A+ILDETG+YKNLLQE + R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQLAQQSGSLSTEQENNDELEQVTIAR 180
             VELAG+ FTGE+AK KKQAEKNAA+AAW SLK+++    SL ++ E   E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKMS----SLDSQDE---EKEQEAVAR 180

Query: 181 ALLSYRLRE-----------RMTSA--SSKPLPFPQ-----------------TFPIQNP 240
            L  ++ +E           R TS   S+K L   +                 + P Q+ 
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 RPS----SPQRRPVTASKILPLIFPKKTPPRVRPLSFTLSDNVGQSSQSQIPE-----SR 300
             S     P   P  +SKILP I   K        + T ++ +  +S++++ E     S+
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMI--NSKAKVNETSTRLSK 300

Query: 301 GAHSQSSQRYLGMGAPPYIPIRHVRSPCHGIAPPVTIRNSVPCYSAPP 310
                   RY  +G     P        + +AP V +R+ +P ++APP
Sbjct: 301 QMPFSDMNRYNFVGGCSVNP--------YSLAPAVQMRSVIPVFAAPP 331

[Close]

BLAST of Spo25507.1 vs. TAIR (Arabidopsis)
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4)

HSP 1 Score: 132.1 bits (331), Expect = 8.600e-31
Identity = 77/174 (44.25%), Postives = 105/174 (60.34%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           +YK QLQ  A +    LP Y   REGP HAPRF+  V F G++F+S ++  TL+ AEHAA
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYRSGLGHQPVFT 120
           A++A+ SL+ + P     A        YKNLLQEI+Q+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GKVELAGIIFTGEAAKNKKQAEKNAALAAWQSLKQ-LAQQSGSLSTEQENNDEL 174
             VE AG +F+GE AK KK AE +AA  A+ S+K   + Q+GS +   E  +++
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDV 169

[Close]

BLAST of Spo25507.1 vs. TAIR (Arabidopsis)
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 2.900e-18
Identity = 58/156 (37.18%), Postives = 85/156 (54.49%), Query Frame = 1


		  
Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKAIVNFNGESFESPQYCSTLRQAEHAA 60
           ++K++LQE AQ+     P Y  ++EGP H   F++ V  +G  + S       + AE +A
Sbjct: 15  VFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSA 74

Query: 61  AEVALNSLSSRGPSHSLAARILDETGVYKNLLQEISQRVGAPLPHYTTYR-SGLGHQPVF 120
           AEVAL  L+         ++ + ETG+ KNLLQE +Q++   +P Y   +   LG    F
Sbjct: 75  AEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQF 134

Query: 121 TGKVELAGIIFTGEAAKNKKQAEKNA---ALAAWQS 153
           T  VE+ GI +TG A + KK AE +A   AL A QS
Sbjct: 135 TCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQS 170

The following BLAST results are available for this feature:

BLAST of Spo25507.1 vs. NCBI nr
BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
BLAST of Spo25507.1 vs. TAIR (Arabidopsis)

BLAST of Spo25507.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902205145\|gb\|KNA15098.1\|	9.0e-256	100.	hypothetical protein SOVF_1012...	[more]
gi\|731356180\|ref\|XP_010689537.1\|	5.7e-202	82.5	PREDICTED: double-stranded RNA...	[more]
gi\|565346281\|ref\|XP_006340194.1\|	9.3e-128	67.2	PREDICTED: double-stranded RNA...	[more]
gi\|147853140\|emb\|CAN80689.1\|	7.9e-127	70.1	hypothetical protein VITISV_00...	[more]
gi\|1012357349\|gb\|KYP68534.1\|	7.9e-127	57.2	Ribonuclease 3 [Cajanus cajan]	[more]

BLAST of Spo25507.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R6H9_SPIOL	6.3e-256	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BLN9_BETVU	4.0e-202	82.5	Uncharacterized protein OS=Bet...	[more]
A0A0V0I9G8_SOLCH	1.0e-128	67.8	Putative double-stranded RNA-b...	[more]
M1AE38_SOLTU	6.5e-128	67.2	Uncharacterized protein OS=Sol...	[more]
A5B1V2_VITVI	5.5e-127	70.1	Putative uncharacterized prote...	[more]

BLAST of Spo25507.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
DRB2_ARATH	6.5e-121	67.1	Double-stranded RNA-binding pr...	[more]
DRB6_ORYSJ	2.2e-105	61.7	Double-stranded RNA-binding pr...	[more]
DRB2_ORYSJ	3.3e-64	46.9	Double-stranded RNA-binding pr...	[more]
DRB3_ARATH	7.3e-64	66.6	Double-stranded RNA-binding pr...	[more]
DRB5_ARATH	1.6e-63	47.7	Double-stranded RNA-binding pr...	[more]

BLAST of Spo25507.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G28380.1	3.7e-122	67.1	dsRNA-binding protein 2	[more]
AT3G26932.1	4.1e-65	66.6	dsRNA-binding protein 3	[more]
AT5G41070.1	9.1e-65	47.7	dsRNA-binding protein 5	[more]
AT3G62800.1	8.6e-31	44.2	double-stranded-RNA-binding pr...	[more]
AT1G09700.1	2.9e-18	37.1	dsRNA-binding domain-like supe...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	GENE3D	3.30.160.20		coord: 2..68 score: 4.0E-22coord: 88..154 score: 5.3
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 88..153 score: 7.1E-13coord: 2..68 score: 4.5
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 88..154 score: 1.4E-18coord: 2..69 score: 1.9
IPR014720	Double-stranded RNA-binding domain	PROFILE	PS50137	DS_RBD	coord: 87..155 score: 11.868coord: 1..70 score: 11
None	No IPR available	PANTHER	PTHR10910	EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN	coord: 1..229 score: 7.2E
None	No IPR available	PANTHER	PTHR10910:SF94	SUBFAMILY NOT NAMED	coord: 1..229 score: 7.2E
None	No IPR available	unknown	SSF54768	dsRNA-binding domain-like	coord: 2..68 score: 2.83E-18coord: 88..157 score: 4.56

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051607	defense response to virus
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0070919	production of siRNA involved in chromatin silencing by small RNA
biological_process	GO:0010267	production of ta-siRNAs involved in RNA interference
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding