Spo25523.1 (mRNA)

Overview
NameSpo25523.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L32
LocationSpoScf_01416 : 159797 .. 162989 (-)
Sequence length1138
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAGAGAAGCAGAAGCCCAAAACGTTTTTAAAAAAGCCTAGGTTTTATTGAAAGTCCACTATTTGCTACGAAGTTAGGGTTCATAAGCCCTCTTTATTTCTTCCCATTCCCCTTCGTCTTCATCATTCTTGCGCCGTCTATCCTCTGCTTCTACTCTCAGGTTTCTCTCTCTTCTTTCCCCTTTTCCTCTTCTTCTTCATGTTTCGAATTCATTTAATGTTAATGTATATTATTCACACCATATTTTTAGATTCTTAGATTCGGAATTTTGATTTTGAATCAATATTTGTGGCGTTTGTTGTAGTTGTTTTGTATTAATTTGTCGTGTGTCTGGTTTGTGATTTTGAAAATTCATTAAAGCTCATACAAAAGTTCGTTTTTCCGATTTTTCTGAGCGATAAATTAAGAAATTGGTTGAGATTGTTGCCCTGAAAGGTTAATATATTCAGAATATTATTTGGGTCTTAAATTATTTTGACGATTAGTGATCTAAATTTATAAGATTTAGAAAACTTCTTCTTTGATAGAAGTGTATGGCCCCAGTTTTTGTTGCATGATATTGCTAGTTCATTAAAATTGTAAACTAAACGTAGGAGCCGAAAAACCTCTTTCCATCTCTAGGGTTTCACTGCCATTCTTCTTCACTCATTGTAAGTTTTCTCTTTTCTCACTCATTTAGCCATGGCGGTTCCTAAGCTTGAAAAGAAGATTGTCAAGAAGAGAGTAAAGCAGTTCAAACGGCCACAGCATGACAGAAGGATGTGCGTCAAGGTATATTATCCGGTGTTTAATCGTCAATCTTTTATAGTTTTTTCAGATTCTGATAATCAATTTTATTCATCAATATCTTTATATTTTGATAGTTCAATTTTGATAGTTCAATGTTTATTTTGAATGAAATATCAGAATAAATGAACGTTTTACCGATTTTAGTTGTTATAATTCTTAGATTTTTGTACTAGTAGTGTAGTTTCAAATTTATTGCTGCTTGTTGAATTGTTCTATGTAAAATTTTATCTTATTATTGTAATATTATATTGGATTGGATAAGAATTGGATGCAATTTGAAGTATAACGCCCTTCATATATAGTGGGTAATTATTTTCGCAAAATAAAAGATTTGGTGCAATTTGAAATTGGTGTTCAATGCTCGATATCGGAACTGTTTATTATGTAGGGGTGTAGCAAGTTAGATTCTGTTTGTTTCAACTAAAAGAAATTTCAGAGGAAAGGAAATGATTTTTTCATGCGGAGCAATTTTCAAAGGAAAACATGAGGGAAAAATTACAAAGAAAAATAAAGTAGAAATGGAAATGAGAACAGAGAAAAGGATATCTAATACGGAGTAGATTAGAGTGCAAAATGTGACATTCGAAATTTGTTTTTTCCTAACTAAAGTTGTTTTCCATAGTTGAGAATTTTTTACCCTTACAAAACAAACAAGATCATGTTTTCTCTATCAAAATGAACAGAGCATTCTTATTTTTATTATTTTTTTGCTCTCAACTTGCATACGATACTCTTTCGAGTTTTAATTTGCATTGATATATTCATGTACTCCGTAACTAACACCAAGGAAGTTTACTTATTGTACCGAAGTGGAAACTTAGGTCCCCTATTAAATGCTGATTTATGAAGTGGTGATTTGCTTTAATGTGCTCTATGATCCCATGCCAATGTGAAAGTGTTTATCACACAATTAATTAGCTCAAGATTTGTTAGATATAACGCATATGTGTATTACAATCTCTGGTGTTATGAAGCATGTACTTGTTAACTTTAAGATCGACCTTTTTGAGTTGTACTGGCCTTTTTCATGGGTTTTCTTGTGGTCAAGTGAAGATAGGTGCAATACAATTAAAACTGTGGTTGTAATTTTATTGCTCTTAATTTCATTTCTTATCATTTATCATAGAGGACTCTCTGTATGTTGTCCATGTTCATGTAATTCATTAGCTTTACTGTAGAATTACAACTTGTTTACCTAGAGTGAAACATGGAATAATATGCTAACTTTTGCTGTAAAAAAAGAATAGTATGCTAATTGTAGTTCTGATGCATAACTTGTATTCCAATAAGTTTTTGCATATCTTTTTACGTAGTCTATTGGATCTGGTTGCCTTGACCGTGTAGAATTTGATTCATGTCTATTATGCCAATTAGACTCTGAAATGCTGTACTTAAAATTTTCTGAATGGTTATCGTGTGCAGACTAACTGGCGTAGGCCCAAGGGTATTGATTCAAGGGTGAGAAGAAAGTTCAAGGGAGTCACTCTAATGCCCAACATTGGTTACGGCTCAGACAAGAAGACTCGTCACTATCTTCCCAACGGTTTCAAGAAGTTTGTTGTTAACAATGTTAGTGAGTTGGAACTCCTAATGATGCATAACAGGTAACAGATTTTCCCGTTGCACTCCTCTTGCCCTGCCTTTTGTTTTCAACTTTTGTTGTGTATTATCCTGACTGATAACCGTTATTTATTTTCCAGGACATATTGTGCTGAGATTGCTCACAATATTTCAACCAAAAAGAGAAAGGATATCGTTGAGCGTGCTGCACAACTAGACATAGTTGTCATTAACAAGCTTGCTCGGCTTCGTAGCCAGGAGGATGAGTGATTCTTTTGTCAAATTTCATGTGGTTGGCTATGTTGTGGACCTGTTGAGTAAAAAAATGGATTTAGATCTTTTTAGAGACCTTCAATGTCTTAACTGTTATGTTCAATTTGTATTATGTTGGCAAGTTGCTCACAATTTTGAAAACTGGAGTTGATGTTATACGACTTCTTTATCAGTCTATTTTCAGCCTTTCAGGCATTAACTAACCATGACATGAGTGTTAATTTTTGAAAACCGTCTCTGCCCTTTTCTGCGAGATCACCTTTTTCCATGGGCATGGAGTGTGTTCTTTGCTTCACGCTATCAAGTTAATGTTAACTTGTCTTTAAGGTGGTGTTTAGTTTGACATTTAACGAGTTAGAAATGGTTCTATTCATGAGTTGAGACATTTTACTAGAGAATATATCAAGTGGGTTTCAAATCCACTTGATCCCCCTAAATTCTCTTACCCACCTAGCTGCCTAACCCTTCAAGATCCACAATCCATTTAGTGCGAGTTACAAACTCAGGATGTGTCTTAGGTGATCCTCCTACTGAGGATCACCATGGTGATTGGTGAATGAATCCTAGCC

mRNA sequence

GGAAAGAGAAGCAGAAGCCCAAAACGTTTTTAAAAAAGCCTAGGTTTTATTGAAAGTCCACTATTTGCTACGAAGTTAGGGTTCATAAGCCCTCTTTATTTCTTCCCATTCCCCTTCGTCTTCATCATTCTTGCGCCGTCTATCCTCTGCTTCTACTCTCAGCCATGGCGGTTCCTAAGCTTGAAAAGAAGATTGTCAAGAAGAGAGTAAAGCAGTTCAAACGGCCACAGCATGACAGAAGGATGTGCGTCAAGACTAACTGGCGTAGGCCCAAGGGTATTGATTCAAGGGTGAGAAGAAAGTTCAAGGGAGTCACTCTAATGCCCAACATTGGTTACGGCTCAGACAAGAAGACTCGTCACTATCTTCCCAACGGTTTCAAGAAGTTTGTTGTTAACAATGTTAGTGAGTTGGAACTCCTAATGATGCATAACAGGACATATTGTGCTGAGATTGCTCACAATATTTCAACCAAAAAGAGAAAGGATATCGTTGAGCGTGCTGCACAACTAGACATAGTTGTCATTAACAAGCTTGCTCGGCTTCGTAGCCAGGAGGATGAGTGATTCTTTTGTCAAATTTCATGTGGTTGGCTATGTTGTGGACCTGTTGAGTAAAAAAATGGATTTAGATCTTTTTAGAGACCTTCAATGTCTTAACTGTTATGTTCAATTTGTATTATGTTGGCAAGTTGCTCACAATTTTGAAAACTGGAGTTGATGTTATACGACTTCTTTATCAGTCTATTTTCAGCCTTTCAGGCATTAACTAACCATGACATGAGTGTTAATTTTTGAAAACCGTCTCTGCCCTTTTCTGCGAGATCACCTTTTTCCATGGGCATGGAGTGTGTTCTTTGCTTCACGCTATCAAGTTAATGTTAACTTGTCTTTAAGGTGGTGTTTAGTTTGACATTTAACGAGTTAGAAATGGTTCTATTCATGAGTTGAGACATTTTACTAGAGAATATATCAAGTGGGTTTCAAATCCACTTGATCCCCCTAAATTCTCTTACCCACCTAGCTGCCTAACCCTTCAAGATCCACAATCCATTTAGTGCGAGTTACAAACTCAGGATGTGTCTTAGGTGATCCTCCTACTGAGGATCACCATGGTGATTGGTGAATGAATCCTAGCC

Coding sequence (CDS)

ATGGCGGTTCCTAAGCTTGAAAAGAAGATTGTCAAGAAGAGAGTAAAGCAGTTCAAACGGCCACAGCATGACAGAAGGATGTGCGTCAAGACTAACTGGCGTAGGCCCAAGGGTATTGATTCAAGGGTGAGAAGAAAGTTCAAGGGAGTCACTCTAATGCCCAACATTGGTTACGGCTCAGACAAGAAGACTCGTCACTATCTTCCCAACGGTTTCAAGAAGTTTGTTGTTAACAATGTTAGTGAGTTGGAACTCCTAATGATGCATAACAGGACATATTGTGCTGAGATTGCTCACAATATTTCAACCAAAAAGAGAAAGGATATCGTTGAGCGTGCTGCACAACTAGACATAGTTGTCATTAACAAGCTTGCTCGGCTTCGTAGCCAGGAGGATGAGTGA

Protein sequence

MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINKLARLRSQEDE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo25523Spo25523gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo25523.1Spo25523.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25523.1.utr5p.2Spo25523.1.utr5p.2five_prime_UTR
Spo25523.1.utr5p.1Spo25523.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25523.1.CDS.3Spo25523.1.CDS.3CDS
Spo25523.1.CDS.2Spo25523.1.CDS.2CDS
Spo25523.1.CDS.1Spo25523.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25523.1.utr3p.1Spo25523.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo25523.1.exon.4Spo25523.1.exon.4exon
Spo25523.1.exon.3Spo25523.1.exon.3exon
Spo25523.1.exon.2Spo25523.1.exon.2exon
Spo25523.1.exon.1Spo25523.1.exon.1exon


Homology
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|902205155|gb|KNA15105.1| (hypothetical protein SOVF_101290, partial [Spinacia oleracea])

HSP 1 Score: 264.6 bits (675), Expect = 9.200e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 29  MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 88

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV
Sbjct: 89  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 148

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 149 INKLARLRSQEDE 161
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|902213767|gb|KNA17331.1| (hypothetical protein SOVF_080870 [Spinacia oleracea])

HSP 1 Score: 258.1 bits (658), Expect = 8.600e-66
Identity = 127/133 (95.49%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL+KKI+KKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLDKKIIKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|902228282|gb|KNA21043.1| (hypothetical protein SOVF_046840 [Spinacia oleracea])

HSP 1 Score: 256.9 bits (655), Expect = 1.900e-65
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL KKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|731319339|ref|XP_010670205.1| (PREDICTED: 60S ribosomal protein L32-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.7 bits (631), Expect = 1.200e-62
Identity = 123/133 (92.48%), Postives = 130/133 (97.74%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKEIVERAAQLDIVV 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. NCBI nr
Match: gi|731319500|ref|XP_010670302.1| (PREDICTED: 60S ribosomal protein L32-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 242.3 bits (617), Expect = 4.900e-61
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNV+ELELLMMHNRTYCAEIAHN STKKRK+IVERA QLD+V+
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVNELELLMMHNRTYCAEIAHNTSTKKRKEIVERATQLDVVI 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6H6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_101290 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.400e-68
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 29  MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 88

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV
Sbjct: 89  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 148

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 149 INKLARLRSQEDE 161
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCT8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_080870 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 6.000e-66
Identity = 127/133 (95.49%), Postives = 133/133 (100.00%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL+KKI+KKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLDKKIIKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNJ3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046840 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.300e-65
Identity = 128/133 (96.24%), Postives = 132/133 (99.25%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVPKL KKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPKLVKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVV+NVS+LELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLD+VV
Sbjct: 61  DKKTRHFLPNGFKKFVVHNVSDLELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDVVV 120

Query: 121 INKLARLRSQEDE 134
           INKLARLRSQEDE
Sbjct: 121 INKLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CYS5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039920 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.100e-63
Identity = 123/133 (92.48%), Postives = 130/133 (97.74%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRK+IVERAAQLDIVV
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKEIVERAAQLDIVV 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZF4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039910 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 3.400e-61
Identity = 118/133 (88.72%), Postives = 128/133 (96.24%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L+KKIVKKRVK+FKRPQHDR++CVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS
Sbjct: 1   MAVPLLDKKIVKKRVKKFKRPQHDRKICVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRH+LPNGFKKFVVNNV+ELELLMMHNRTYCAEIAHN STKKRK+IVERA QLD+V+
Sbjct: 61  DKKTRHFLPNGFKKFVVNNVNELELLMMHNRTYCAEIAHNTSTKKRKEIVERATQLDVVI 120

Query: 121 INKLARLRSQEDE 134
            NKLARL S+EDE
Sbjct: 121 TNKLARLASREDE 133
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 5.100e-58
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVV+N SELELLMMHNRTYCAEIAHN+STKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            N+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 8.600e-58
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKF+V+N SELELLMMHNRTYCAEIAHNISTKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.900e-42
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1 

		  

Query: 4   PKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 63
           P ++ KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINK 123
           T+H LP+GF+KF+V+NV ELE+L+M N++YCAEIAHN+S+K RK IVERAAQL I V N 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.900e-42
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1 

		  

Query: 4   PKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 63
           P ++ KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINK 123
           T+H LP+GF+KF+V+NV ELE+L+M N++YCAEIAHN+S+K RK IVERAAQL I V N 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135
[Close]
BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=1 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 3.900e-42
Identity = 86/130 (66.15%), Postives = 109/130 (83.85%), Query Frame = 1 

		  

Query: 4   PKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGSDKK 63
           P ++ KIVKKR K+F R Q DR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVVINK 123
           T+H LP+GF+KF+V+NV ELE+L+M N++YCAEIAHN+S+K RK IVERAAQL I V N 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135
[Close]
BLAST of Spo25523.1 vs. TAIR (Arabidopsis)
Match: AT4G18100.1 (Ribosomal protein L32e)

HSP 1 Score: 224.9 bits (572), Expect = 2.900e-59
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKFVV+N SELELLMMHNRTYCAEIAHN+STKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            N+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133
[Close]
BLAST of Spo25523.1 vs. TAIR (Arabidopsis)
Match: AT5G46430.1 (Ribosomal protein L32e)

HSP 1 Score: 224.2 bits (570), Expect = 4.900e-59
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 1 

		  

Query: 1   MAVPKLEKKIVKKRVKQFKRPQHDRRMCVKTNWRRPKGIDSRVRRKFKGVTLMPNIGYGS 60
           MAVP L KK+VKKR  +F RPQ DRR+ VK +WRRPKGIDSRVRRKFKGVTLMPN+GYGS
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVNNVSELELLMMHNRTYCAEIAHNISTKKRKDIVERAAQLDIVV 120
           DKKTRHYLPNGFKKF+V+N SELELLMMHNRTYCAEIAHNISTKKRK IVERA+QLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 INKLARLRSQEDE 134
            NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133
The following BLAST results are available for this feature:
BLAST of Spo25523.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902205155|gb|KNA15105.1|9.2e-68100.hypothetical protein SOVF_1012... [more]
gi|902213767|gb|KNA17331.1|8.6e-6695.4hypothetical protein SOVF_0808... [more]
gi|902228282|gb|KNA21043.1|1.9e-6596.2hypothetical protein SOVF_0468... [more]
gi|731319339|ref|XP_010670205.1|1.2e-6292.4PREDICTED: 60S ribosomal prote... [more]
gi|731319500|ref|XP_010670302.1|4.9e-6188.7PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo25523.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R6H6_SPIOL6.4e-68100.Uncharacterized protein (Fragm... [more]
A0A0K9RCT8_SPIOL6.0e-6695.4Uncharacterized protein OS=Spi... [more]
A0A0K9RNJ3_SPIOL1.3e-6596.2Uncharacterized protein OS=Spi... [more]
A0A0J8CYS5_BETVU8.1e-6392.4Uncharacterized protein OS=Bet... [more]
A0A0J8CZF4_BETVU3.4e-6188.7Uncharacterized protein OS=Bet... [more]
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BLAST of Spo25523.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL321_ARATH5.1e-5884.260S ribosomal protein L32-1 OS... [more]
RL322_ARATH8.6e-5884.260S ribosomal protein L32-2 OS... [more]
RL32_HUMAN3.9e-4266.160S ribosomal protein L32 OS=H... [more]
RL32_RAT3.9e-4266.160S ribosomal protein L32 OS=R... [more]
RL32_PIG3.9e-4266.160S ribosomal protein L32 OS=S... [more]
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BLAST of Spo25523.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G18100.12.9e-5984.2Ribosomal protein L32e[more]
AT5G46430.14.9e-5984.2Ribosomal protein L32e[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32ePRODOMPD003823coord: 20..123
score: 1.0
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 16..122
score: 1.3
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
score: 1.9
IPR001515Ribosomal protein L32eunknownSSF52042Ribosomal protein L32ecoord: 3..131
score: 6.54
NoneNo IPR availablePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 1..133
score: 8.4E

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005730 nucleolus
molecular_function GO:0003735 structural constituent of ribosome