Spo25555.1 (mRNA) | SpinachBase

Overview


Name	Spo25555.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Photosystem I P700 chlorophyll a apoprotein A1 (1.97.1.12) (PSI-A) (PsaA)
Location	chr6 : 16462469 .. 16477018 (+)
Sequence length	1128

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTCCACGGTGCCCGTTTTTCCAATTATGAAGCATGGCTAAGCGATCCTACTCACATTGGACCTAGTGCCCAAGTAGTTTGGCCGATAGTGGGTCAAGAAATATTGAATGGTGATGTAGGGGGAGGTTTCCGAGGAATACAAATAACCTCTGGGTTTTTTCAAATTTGGCGAGCATCTGGAATAACTAGTGAATTACAACTTTATTGTACCGCAATTGGTGCATTGGTCTTTGCAGCATTAATGCTTTTTGCTGGTTGGTTCCATTATCACAAAGCGGCTCCAAAATTAGCTTGGTTCCAAGATGTGGAATCTATGTTGAATCACCATTTAGCAGGACTACTAGGACTTGGGTCTCTTTCTTGGGCGGGTCATCAAATCCATGTATCTTTACCGATTAACCAATTTCTAAATGCTGGAGTAGATCCTAAAGAGATACCGCTTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCTCAACTTTNTCCTCATGAATTTATCTTGAATCGGGATCTTTTGGCTCAACTTTATCCCAGTTTTGCCGAAGGAGCAACCCCGTTTTTCACTTTGAATTGGTCAAAATATGCGGACTTTCTTACTTTTCGTGGAGGGTTAGACCCAGTAACTGGAGGTCTGTGGCTGACCGATACTGCACACCATCATTTAGCTATTGCAATTCTTTTCCTGATAGCGGGTCATATGTATAGAACGNGCACACCATCATTTAGCTATTGCAATTCTTTTCCTGATAGCGGGTCATATGTATAGAACGAACTGGGGCATTGGGCATGGTCTAAAAGATATTTTAGAGGCTCATAAAGGTCCATTTACGGGCCAGGGACATAAAGGCTTATATGAGATCTTAGCAACGTCATGGCATGCTCAATAGCTCTTAACCTAGCTATGTTAGGTTCTTTAACCATCGTTGTAGCTCATCATATGTATGCGATGCCCCCTTATCCATATCTAGCTATTGACTATGGTACCCAACTTTCATTGTTTACACAACACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCGGCAATTTTTATGGTAAGAGACTATGATCCAACTACTCGATACAACGACTCATTAGATCGAGTTCTTAGACATCGCGATGCAATCATATCACATCTTAACTCGGCATGTATATTTCTAGGATTTCACAGTTTTGGTTTATATATTCATAATGATACCATGAGTGCATTAGGGCGTCCTTAAGATATGTTTCCAGATACCGCTATACAATTACAACCTGTCTTCGCTCAATGGATACAAAACACCCATGCTTTAGCGCCTAGTGCAACGGCTCCGGGTGCAACAGCAAGCACCAGTTTGACTTGGGGAGGTAGTGATTTAGTAGCAGTGGGTTCAAAAGTAGCCTTGTTACCCATTCCACTAGGGACCGCAGATTTTTTAGTCCACCACATTCATGCTTTTACAATTCATGTGACGGTACTAATACTTCTAAAAGGCGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCAAATCTTGGGTTTTGCTTCCCTTGTGATGGTCCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATGTATTCTTAGGGCTATTCTAGATGTACAACTGAATTTCGGTAGTAATATTTCCTTTCAGTTGGAAAATGCAGTCAGATGTTTGGGGTAGTATAAGCGATCAAGGGGTGGTAACTCATATCACTGGAGGAAACTTTGCGCAAAGTTCTATTACTATTAATGGGTGGCTACGTGATTTCTTATGGGCGCAAGCATCCCAGGTAATTCAGTCTTACGGTTCTTCATTATCTGCATATGGTCTTTTTTTTCCTAGGTGCTCATTTTGTATGGGCTTTTAGTTTAATTTTTTTATTTAGCGGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCGTTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTACAAGGACGTGCTGTAGGAGTAACCCATTACCTTCTGGGTGGAATTGCCACAACATGGGCGTTCTTCTTAGCAAGAATTATTGCAGTAGGATAATGTCTAGGAGGATTTGAAAGGCATTATGGCATTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTTCCGCACATGACTTCAAGAGTCATGATGATATTACTGAAGAACGTCTTTATCAGAATATTTTTGCTTCTCACTTTGGGCAATTAGCAATCATTTTTCTGTGGACTTCCGAAAATCTGTTTCATACATTGAAGCATGCAAAGTTTAAACATTTTATCATGAGTAATAACTTGAAAATTAAAGCAATCATGCAATTTAAACAAGTCATTGGCATTTTATTCAAATTTATTGTTCCGACAGGTGTGAATAAAATGATTCCAAGATCCTTAAATCATTGAAGAATTAAGCACATTATGTATTTTGACTCAATTCTAAAATATTTTAGGTAAGCAAAAGCCTTTTTCTAATAGTCTAGAAACTACTCTTGGTTGATAGGTACGTCTAAGAACTTATTAGGTAAACCTATCGAATTTGCTACGACATAAAAGGACTCCTTACTTATATCGTTGAGTTTCAACAAAACTAACATGTACTCACAATTGTTTGTGTACCTTACCCCTTTAAAATCAATAAGTAACACCTCGCTATGGCGGAAAACTATCACTAAGATTGATGTAAAGGTTATCCAAGTAAGTGTTATTTTGGCATGGCACATTTTAACTCAATTTTTAAGTTTGGAACTTAAGGCTCTTACTATGTTGGTTAGATTTTAAGTGAACTAAAATCCTTAATCATGCAACATAATCAAGCCACAATCTCATGCATATTTAAGACATATTTAAAAGCAATAAATAACTTAAAGCATGCATAAGATAAATGTGATCTAGTATGGCCCGACTTCATCTGAAAGCTTCAACTTCAAAGTCCGTCTTGAAAATGGATTGGAAACTCCCTCTTGAATTTCACCGTGGGAGGCGCCATTTTCTTCAAATAGGATAAGCTATAATTAAACTAATTACAACTATTTGATGGTATGCAGACCATATTTGAATTGAAAAACAAACTTTGGTGCATTAGACCAATTACATTCAAATTAAGGGTACGCATACCATATTTTCTATCCTATTTGGGCCATACTAGTCACTTCATAACCTGCAAAACAGTACATATAAAATATATACCATTCACTCATTCATTATCATGAATGGCCCACATAGCTGGTTAGTAAAACACATTGTTATGCATCACATAAATATTTGCAGCAATTAATCAAGGACACCAATAATCTACCAATTATTCAGTCATGTCCTTATTAATTCTAATCAAGTTGCTTAACCTTAAAGGATTTGTAGACCTAATCAAGAGTTTATGACTAAGGGCTCCCACTTAAACCAATAACTTTATATGCTTTACTAATTTTAAACATAAAAATGTATTTCTAGTCTAACCGGAAACATACAAGTTTAATTAAAATTTAAAGCTCATATAAAATTATAATCGAATCCATTTAATTTATTTTCAGTTGAAGAATTTAAATTAATTCAAGGTTCAATTTTAATAAAATAATTAGTATAAATTAAAATTTATAATAATTATAATATTTAAAATTAAAATCCGAGAAATAAATTTAAATTATTAATTTTAGAATTAATTAAAATTATTTCCAAACTGAAAATCTAAAATTAAAACGAAACGTATCAATTGTCCCAAGACGAGGCACTTGGGCTTGCGCCCAAGCCCCATCGAGCTACGAGTCCCCATGCCCCGTTCCATTGATCGTTGCACACGGCTTGCACAGCCACACGCACATTGCCCCTCTGCCACGCACACACGCAGCCTTGCTGGCTACGTTGCGCGCAGCTTCGTGCTGTGTCGTGGCGCAGCACATCGCTACCCACACGCATCTTGCTCGTCGCATTTGTTGCTCATTGCCCTCGCCCATCGCCCAGCATGCACGCCTAGGCTTCGAGCCTTGCGTGCCGCCTAGCTTGTTGCTCGCTGCATTCGTACCGCATGGGCGACGAGCTCCCTTGCTCGTCGTCGCGTGCCCGCACTATACAACACCCCTTAAGGGTAACACGTAGCTTCCATTGCTTTGTGCGTGCAACATTTATGAGCGAATTTTATAAAATTAAAACTTTTAATTTAAAATTAATGACAAATTAATAAATCATATTATTTTCATAATTTTAGGGCGAAAATCGAAAATTTATTAATCAATTAATTTCCGATTAACATGGATTCAAATCTAGGTCATAAAAATTTAAAATTTATCATAAATTAACAATTTTTATGGTGGTTTTTAATCATGGATACCTAATTAAATCATTAATTAATTATGAAAATCAAATCAATTCTAAATTATTCGAATTTTAACAAATTAATCATAATTACAAATTAGGTTGTATATTTAACAAGTCTAAGCATTCAAAATTGTTAAACATATACAGTAGGTCAATCAAAAATTCAAGATTTATCAACAAGAATCGCAAATATTCAATTTAACATCTTAAACTTACAAACTTTTGCGTTCGAAAAACTAAAACCTCCGAAAAGTCATAGTTAGGCTTCGAATTTGGGAATTCTGGGTTAGGCCGAAAAATACTGTTTTTGTCAAATTTTTAGAATGCCTTTTACATGCGGAATTTACACAAAAACCACTCGATTTGGATGAGTAACGAAGTAACTGCCAAAAAACTGCGTACATATAATTAAATAAACGCAATTTGCAATTAATTAACAATTGCGAAAATTAATCACCCCTTTTTAATTCTTTGCAAATTTGTAAAATTTAACCATGTTAAGAAATTTATAGATTATGCAAATAGTAATAGGCTCGTGATACCACTGTTAGGTTATGATACATATGAACAACATAAATCATGCGGAAAAACCTTAATGCCATGATACATATTAATTGCACATAATCATATAATTAGTCTAGGATGCATACTATAGACACCTACTTTTGTACCCATTCCCGAAAGGAAAGGTTCGATGATGAAAGCATAAATCTCCACTTGACAACGCATCTCCTATAAAATAACGAATCTCGATCACCCCTTTTCATTTCACCCGAAACCTGCTATTTATAGAAACCGGCTATTTATGGAAACCTGCTAAAAATAGTAACTGCCGTAATGGGTAGTTGTTAAAAGTGGCAAGTCATAAAAGATAGAAACCTGTCAGAATTAGGTGTTGCACTCCAACATAAATCCTAAATGAGATAGAAATTGCAAGAGAATCCTATTCCTAATATGATTCGAAAGTAAGAGTTACGTATTAATTAAAATCCTAACGAGCCTAGAGTTCGTAACGGGCCCAAATGCATCCCGTCACAAGGTTAATATGCACTAAAAGGCTCAATTAAATATCAAATACTCCGGATTCTAGGAATCCGAATCTGACTAAGAAAAACAGCCCAGATCCTATTTTCAATGCCTGGCTCTGGGCGCCGAAATCTTCGGCGCCCAGGCCTGGGCGCTGAAAATACCTGGTACGTGTTTTTTCCTAATTCCTCGTGGATTAGAGTTCTACAATTCTATCTTTCCACGAACTCTTTTCTATAAATAGGGCCTTAAGTTCGACGTGAAAAGGACAACACACAACAAACAACACACAATTATTATTCTGAGTATTGACTCCAACCCCTAAGCCTAAGCCTCACGCTGCGAAATTGATCACGCGTTCTGTCGCAATCGATCCATAAATCGAACAGAACGTATCCTGTCCCATAACTTGAGATTCGTTAAATAAAAGGATAAATAGCAAAGTCAAAGTGGTTAGTTTTCTAAAAATCGTGACGTACCTCTCAAGGGTCACTAGTAGAAAAAACCCTTATTGCAGCGGGCTTTTAGACCCCTGTTGCAGCGTACATCGTATGCTACAACTGGGGGGCCTGCAACAAGTCTGAACTTGTTGCAGCGTACAAGTTCGCTGCAAAAAGTGATTTGTTGCAGCGGGCTTTTAGATGTACGCTGCAACAAGTGCCAAAAAATTGGCAAAAATTTGGACTTGTTGCAGCGTACATATATATGTACGCTGCAAAAGACTCAACTTTTTGCAGCGTACATTTATTTGTACGCTGCAACAAGTCTGAATTTTTGCGAAATTTTTTTCCCTTGTTGCAGCGTACAATATATATGTACGCTGCAACAAAGCACTTTTGGCAGGAAAATTCTAATTTTGTTTAGGGATACCTAGAGTGCCTTGCACCAAATATAGAAACCTGTCAAAACAATAATAGAATAACGCAACCTGTATAACAAATATAAAAACAACAACTAGAGTTTTGTATACTATATATATCCCAAAACCAAATTAAGTGCACATATTACATTTAAATATATGTTCCAATTTCAACATAAACATACATTTTAATATAAAATTTATTCTATAACAACTAAACCAACTCGATCAAGCGCGCTAAAGCCAATAATAAATACTTGCTGGTAAAAAACTTGGCCCATTGCTCACGAACCACATCAAATTCCTCGCATAAGGCGCAATCCTCGGAGTGTAGACCTTTACAAAAACAGAAATTTAAATTAAACATTAGATTAAATACAAATTAAATATCACATTTTAACATTCAAGAAACTAATGACAATGTCCTAATAGTCTAAAATGAGTCCTTAGGTTCTTTAGTTCAAAGTTAGAGGCGAAAATGTCATTTTAGCCTAAATATGACCTATAATGACCCAATGAGCCTATAGGTGCATAAATAGATTGGAACGAGTCTTAGATTGTTAAAATTATGCATATTAAACATGTAATAAGTTTTAAATGAGTCCTTAGGTTCTTTATTTTAAAGTTGGGAGAGAAAATGCCTTATTTTAGCCTAGATATGACCTATAACGATCAAACAAGCATTAAATGGGTATAAGTAGATTAGAATAAGTCCTAGAAACTCAAAACTAAGCTTATTAATCATATAATAATTTAAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGGGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAACTAGAATATAAAACATTTAGTAGGTTTAAAATGAGTCCTTAGGTTCTTTAGTTCATAGTTGGGAGAGAAAATGTCATTTTAGCCTTAATATGACCTACAACGACCTAATGAGCCTTAAAGGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAAACATGTATTAAGTTTAAAATGAGTGCTTAGGTTCTTTATTTTAAAGTTGGGAGCGAAAATGCCTTATTTTAGCCTAGATATGACCTATAACGATCAAACAAGCATTAAATGGGTATAAGTAGATTAGAATAAGTCCTAGAAACTCAAAACTAAGCTTATTAATCATATAATAATTTAAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGGGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAGAATATAAAACATTTAGTAGGTTTAAAATGAGTCCTTAGGTTCTTTAGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTACAACGACCTAATGAGCCTTAAATGTGCATAAATANGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTACAACGACCTAATGAGCCTTAAATGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAAACATGTATTAAGTTTAAAATGAGTGCTTAGGTTCTTTATTTCAAAGTTGGGAGCGAAAATGCCTTATTTTAGCCTAGATATGACCTATAACGATCAAACAAGCATTAAATGGGTATAAGTAGATTATAATAAGTCCTAGAAACTCAAAACTAAGCTTATTAATCATATAATAATTTAAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAACCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGGGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAACTAGAATATAAAACATTTAGTAGGTTTAAAATGAGTCCTTAGGTTCTTTAGTTCATAGTTGGGAGCGAAAATGTCATTTTAGTCTAAATATGACCTACAACGACCTAATGAGCCTTAAAGGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAAACATGTATTAAGTTTAAAATGAGTGCTTAGGTTCTTTATTTTAAAGTTGGGAGCGAAAATGCCTTATTTTAGCCTAGATATGACCTATAACGATCAAACAAGCATTAAATGGGTATAAGTAGTTAGAATAAGTCCTAGAAACTCAAAACTAAGCTTATTAATCATATAATAATTTAAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGGGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAACTAGAATATAAAACATTTAGTAGGTTTAAAATGAGTCCTTAGGTTCTTTAGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTATAACGATAAAACAAACATTAAATGTGCATAAATAGATTAAAATAAGTCTTAGAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGCCTCATTTTAGCCTAAATATGACCTACAACGACCTAATGAGCCTTAAAGGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAATCATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTAGTGCAAAGTTGGGAGCGAAAATGCCTCATTTTAGCCTAAATATGACCTACAACGACCTAATGAGCCTTAAAGGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAATCATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTAGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTACAACGACCTAATGAGCCTTAAAGGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAATCATGTATTAAGTTTAAAATGAGTGCTTAGGTTCTTTATTTTAAAGTTAGGAGCGAAAATGCCTCATTTTAGCCTAAATATGTCCTATAACTATCAAACAAGCATTAAATGTGCATAAATAGATTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAATCATATAATAAGTTTAAAATGAGTCATTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGGCACTTTAGCCTAAATATGACCTATAACGACACAATGAGCCTTAAATATGCATAAATGGATTGGAATGAGTTCTAGAAAGTCAAAACTAAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTAGTTCATAGTTTGGAGCGAAAATGTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAATCATATAATAAGTTTAAAATGAGTCATTAGGTTCTTAAGTTCAAAGTTGCGAGCAAAAATGGCACTTTAGCCTAAATATGACCTACAACGACCTAATGAGCCTTAAAGGTGCATAAATAGATTGGAACGAGTCTTATAAAGTTAAAATTATGCATATTAAACATGTATTAAGTTTAAAATGAGTGCTTAGGTTCTTTATTTTAAAGTTGGGAGCGAAAATGCCTCATTTTAGCCTAAATATGACCTATAACGATAAAACAAACATTAAATGTGCATAAATAGATTAAAATAAGTCTTAAAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGATTTGAAATGCGACAAGAGAAAAACAAGTCGGAGGCACCAAAATACAGGACCTGAAAATCTGATATCAAATAAACATATTCNAACGACACAATGAGCCTTAAATGTGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTGGTTCATAGTTGGGAGCGAAAATTTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAAACATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTATTTTAAAGTTGGGATCGAAAATGCCTTATTTTATCCTAAATATGACCTATAACGATAAAACAAGCATTAAATGTGCATAAATAGATTAAAATAAGTCTTAGAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGTGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTGGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAAACATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTATTTTAAAGTTGGGAGCGAAAATACCTTATTTTAGCCTAACTATGACCTATAACGATCAAACAAGCATTAAATGGGTATAAGTAGATTAGAATAAGTCCTAGAAACTCAAAACTAAGCTTATTAATCATATAATAATTTAAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGTGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTGGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAAACATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTATTTTAAAGTTGGGATCGAAAATGCCTTATTTTATCCTAAATATGACCTATAACGATAAAACAAGCATTAAATGTGCATAAATAGATTAAAATAAGTCTTAGAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGAGTCATTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGGGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTGGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAATCATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTATTTTAAAGTTGGGATCGAAAATGCCTTATTTTATCCTAAATATGACCTATAACGATAAAACAAGCATTAAATGTGCATAAATAGATTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGAGTCCTTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTATAACGACACAATGAGCCTTAAATGTGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTGGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAAACATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTATTTTAAAGTTGGGATCGAAAATGCCTTATTTTATCCTAAATATGACCTATAACGATAAAACAAGCATTAAATGTGCATAAATAGATTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGAGTCATTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTAAAACGACACAATGAGCCTTAAATGTGCATAAATGGATTGGAATGAGTCCTAGAAAGTTAAAAATAAGCATATAAAACATTTAGTAAGTTTAAAATGAGTCCTTAGGTTCTTTGGTTCATAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGTCCTATAACGACCAAACAAGCCTTAAATGTGTATAAGTAGTTAGAATAAGTCTTAGAAACTTAAAACTAAGCATATTAAACATGTAATAAGTTTAAAATAAGTCCTTAGGTTCTTTATTTTAAAGTTGGGAGCGAAAATACCTTATTTTATCCTAAATATGACCTACAACGATAAAACAAGCATTAAATGTGCATAAATAGATTATAATAAGTCTAAGAAACTTAAAACTAAGCATATTTATCATATAATAAGTTTAAAATGAGCTATTAGGTTCTTAAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTGGGGTTGGATAATTTTAAACACATACTAATTCCAAAATATGCTAAACCAAATAGATTGGATTAAGTCTTGGAAAGTTGAAACTAATCATATGAATCATGTATTTAAGTTTGACATGAGTTTTTAGGTTCGTTAGTTCAAAGTTGGGAACGAAAGTGACATTTTAGCCTATATATGACCTATAACGGCAAAAGAAGTCTCGAATGTGCAGAGATAGATTGGAACGAGTGTTGGAAATTTAAAACTAATCATATTAATCATGTAATAAGTTTGAAATGAATCCTTAGGTTATCTAGTTATGAATTGGGAGCGAAAATGACTTATTTTAGCCTAACTATGACCTATAACGACCAAAGTCTCAAATGTGCATACATAGATTAGAATGAGTTTTATAAAGTTAATATTATGCATATTAATCATGTAATAAGAATAAAATGAGTCATTAGGTTCGTTAGTTCAAAGTTGGGAGCGAAAAATGTCATTTTAGCCTAATTATGACCTATAATGGCCAAACAAGTCTCAAATGTGCATAAATAGATTGGATTGAGTCTTGGAAAGTTAAAGCTAATCATATAAATCATATAGTAAGTTTGAAATGAGTTCTTAGGTTCATTAGTTCAAAGTTGGGAGCGAAAATGTCATTTTAGCCTAAATATGACCTATATAGCCAAACAAGTCTCAAATGTACATAAATAGATTGGATTGAGTCTTGGAAAGTTACAACTAATCATATGCCTATTTCCACCCAAATCCAAGAACAACCTATGCCTATTTCCAAAAAAGAAAAAGGGAGGGAAAGAAAAAGAAAGATAATACAAGAGCATGTTAAAGACCAAAAAATAAAAACAAGTAGAAACTTAGCCGATTTTCATATTAGCTTTATGACTTATTTTTTCCCCACATGGAATCCTTCTTCAGCTAATTCCATTAATTAATTAAATGAGAAAACAAATTAAATAATTAACCAACACCAAAGTACATGCAAGAAACAAAATTAGATGTCTTACTTTTTTCCTCAACCGGCTTTTCCTTGCTGCCTCACGGTTCTGAGCAAGCCTTCGTAGAGTCTATAATAATAAATCTTTAAAGATGTTACAAAAATGAAGCTACAAGATGTCAAATAGCATGAAAAGAGAAGAGTGAACAACTTCTAACCTTATGATCAGTCTACTTCGATCTGTCACTCGAATGATAATGACATTGCTTCTGCCCCCACCGTCTCTGAGCTTCCATCGTCACGAAATACAACCAGGCCTTTATTGAGTTTGTCGTCCCAAGATTCAAGTTCAGCCTCTCTCCAAATGCTAGCTCCATTCCCTGAAACTGCCAAAATGCTAGCTCCTACAAATGGCTGCCCCCAACTAGGTGACACATACTTCTTCAGGGAAGACAGGGACATTAGTGTTCCTGTAGCAGATAACAATACAATATTTAGGTAA

mRNA sequence

ATGTATTTCCACGGTGCCCGTTTTTCCAATTATGAAGCATGGCTAAGCGATCCTACTCACATTGGACCTAGTGCCCAAGTAGTTTGGCCGATAGTGGGTCAAGAAATATTGAATGGTGATGTAGGGGGAGGTTTCCGAGGAATACAAATAACCTCTGGGTTTTTTCAAATTTGGCGAGCATCTGGAATAACTAGTGAATTACAACTTTATTGTACCGCAATTGGTGCATTGGTCTTTGCAGCATTAATGCTTTTTGCTGGTTGGTTCCATTATCACAAAGCGGCTCCAAAATTAGCTTGGTTCCAAGATGTGGAATCTATGTTGAATCACCATTTAGCAGGACTACTAGGACTTGGGTCTCTTTCTTGGGCGGATACCGCTATACAATTACAACCTGTCTTCGCTCAATGGATACAAAACACCCATGCTTTAGCGCCTAGTGCAACGGCTCCGGGTGCAACAGCAAGCACCAGTTTGACTTGGGGAGGTAGTGATTTAGTAGCAGTGGGTTCAAAAGTAGCCTTGTTACCCATTCCACTAGGGACCGCAGATTTTTTAGTCCACCACATTCATGCTTTTACAATTCATGTGACGGTACTAATACTTCTAAAAGGCGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCAAATCTTGGGTTTTGCTTCCCTTGTGATGGTCCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATTCAGATGTTTGGGGTAGTATAAGCGATCAAGGGGTGGTAACTCATATCACTGGAGGAAACTTTGCGCAAAGTTCTATTACTATTAATGGGTGGCTACGTGATTTCTTATGGGCGCAAGCATCCCAGTCTACTTCGATCTGTCACTCGAATGATAATGACATTGCTTCTGCCCCCACCGTCTCTGAGCTTCCATCGTCACGAAATACAACCAGGCCTTTATTGAGTTTGTCGTCCCAAGATTCAAGTTCAGCCTCTCTCCAAATGCTAGCTCCATTCCCTGAAACTGCCAAAATGCTAGCTCCTACAAATGGCTGCCCCCAACTAGGTGACACATACTTCTTCAGGGAAGACAGGGACATTAGTGTTCCTGTAGCAGATAACAATACAATATTTAGGTAA

Coding sequence (CDS)

ATGTATTTCCACGGTGCCCGTTTTTCCAATTATGAAGCATGGCTAAGCGATCCTACTCACATTGGACCTAGTGCCCAAGTAGTTTGGCCGATAGTGGGTCAAGAAATATTGAATGGTGATGTAGGGGGAGGTTTCCGAGGAATACAAATAACCTCTGGGTTTTTTCAAATTTGGCGAGCATCTGGAATAACTAGTGAATTACAACTTTATTGTACCGCAATTGGTGCATTGGTCTTTGCAGCATTAATGCTTTTTGCTGGTTGGTTCCATTATCACAAAGCGGCTCCAAAATTAGCTTGGTTCCAAGATGTGGAATCTATGTTGAATCACCATTTAGCAGGACTACTAGGACTTGGGTCTCTTTCTTGGGCGGATACCGCTATACAATTACAACCTGTCTTCGCTCAATGGATACAAAACACCCATGCTTTAGCGCCTAGTGCAACGGCTCCGGGTGCAACAGCAAGCACCAGTTTGACTTGGGGAGGTAGTGATTTAGTAGCAGTGGGTTCAAAAGTAGCCTTGTTACCCATTCCACTAGGGACCGCAGATTTTTTAGTCCACCACATTCATGCTTTTACAATTCATGTGACGGTACTAATACTTCTAAAAGGCGTTCTATTTGCTCGTAGCTCTCGTTTGATACCGGATAAAGCAAATCTTGGGTTTTGCTTCCCTTGTGATGGTCCTGGAAGAGGGGGAACATGCCAAGTATCCGCGTGGGATCATTCAGATGTTTGGGGTAGTATAAGCGATCAAGGGGTGGTAACTCATATCACTGGAGGAAACTTTGCGCAAAGTTCTATTACTATTAATGGGTGGCTACGTGATTTCTTATGGGCGCAAGCATCCCAGTCTACTTCGATCTGTCACTCGAATGATAATGACATTGCTTCTGCCCCCACCGTCTCTGAGCTTCCATCGTCACGAAATACAACCAGGCCTTTATTGAGTTTGTCGTCCCAAGATTCAAGTTCAGCCTCTCTCCAAATGCTAGCTCCATTCCCTGAAACTGCCAAAATGCTAGCTCCTACAAATGGCTGCCCCCAACTAGGTGACACATACTTCTTCAGGGAAGACAGGGACATTAGTGTTCCTGTAGCAGATAACAATACAATATTTAGGTAA

Protein sequence

MYFHGARFSNYEAWLSDPTHIGPSAQVVWPIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGALVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGTCQVSAWDHSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQSTSICHSNDNDIASAPTVSELPSSRNTTRPLLSLSSQDSSSASLQMLAPFPETAKMLAPTNGCPQLGDTYFFREDRDISVPVADNNTIFR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25555	Spo25555	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25555.1	Spo25555.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25555.1.exon.1	Spo25555.1.exon.1	exon
Spo25555.1.exon.2	Spo25555.1.exon.2	exon
Spo25555.1.exon.3	Spo25555.1.exon.3	exon
Spo25555.1.exon.4	Spo25555.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25555.1.CDS.1	Spo25555.1.CDS.1	CDS
Spo25555.1.CDS.2	Spo25555.1.CDS.2	CDS
Spo25555.1.CDS.3	Spo25555.1.CDS.3	CDS
Spo25555.1.CDS.4	Spo25555.1.CDS.4	CDS

Homology

[Close]

BLAST of Spo25555.1 vs. NCBI nr
Match: gi|11497525|ref|NP_054933.1| (photosystem I P700 chlorophyll a apoprotein A1 [Spinacia oleracea])

HSP 1 Score: 311.2 bits (796), Expect = 2.400e-81
Identity = 161/194 (82.99%), Postives = 163/194 (84.02%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. NCBI nr
Match: gi|1002161918|ref|YP_009232042.1| (photosystem I P700 apoprotein A1 (chloroplast) [Lavandula angustifolia])

HSP 1 Score: 309.7 bits (792), Expect = 7.000e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. NCBI nr
Match: gi|916439855|gb|AKZ22632.1| (photosystem I P700 chlorophyll a apoprotein A1 (plastid) [Verbena hastata])

HSP 1 Score: 309.7 bits (792), Expect = 7.000e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. NCBI nr
Match: gi|408903325|gb|AFU96273.1| (PsaA, partial (chloroplast) [Dichapetalum zenkeri])

HSP 1 Score: 309.7 bits (792), Expect = 7.000e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 470 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 529

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 530 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 589

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 590 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 649

[Close]

BLAST of Spo25555.1 vs. NCBI nr
Match: gi|630716135|ref|YP_009027970.1| (photosystem I P700 chlorophyll a (chloroplast) (chloroplast) [Chrysobalanus icaco])

HSP 1 Score: 309.7 bits (792), Expect = 7.000e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP ATAPGATASTSLTWGGSDLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
Match: A0A0K1Z9Z3_9LAMI (Photosystem I P700 chlorophyll a apoprotein A1 OS=Verbena hastata GN=psaA PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.900e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
Match: A0A0K0M263_9ASTR (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lygodesmia juncea GN=psaA PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.900e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
Match: K4KDH7_CHRIA (PsaA (Fragment) OS=Chrysobalanus icaco GN=psaA PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.900e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP ATAPGATASTSLTWGGSDLVAVG KVAL
Sbjct: 470 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 529

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 530 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 589

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 590 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 649

[Close]

BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
Match: A0A0B5G9C7_9ASTR (PsaA OS=Chrysanthemum indicum PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.900e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
Match: A0A023SZM7_CHRIA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Chrysobalanus icaco GN=psaA PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.900e-81
Identity = 160/194 (82.47%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP ATAPGATASTSLTWGGSDLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPDATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
Match: PSAA_SPIOL (Photosystem I P700 chlorophyll a apoprotein A1 OS=Spinacia oleracea GN=psaA PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.500e-83
Identity = 161/194 (82.99%), Postives = 163/194 (84.02%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
Match: PSAA_CALFG (Photosystem I P700 chlorophyll a apoprotein A1 OS=Calycanthus floridus var. glaucus GN=psaA PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 7.500e-83
Identity = 158/194 (81.44%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQP+FAQW+QNTHALAPSATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPIFAQWVQNTHALAPSATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
Match: PSAA_EUCGG (Photosystem I P700 chlorophyll a apoprotein A1 OS=Eucalyptus globulus subsp. globulus GN=psaA PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 9.800e-83
Identity = 159/194 (81.96%), Postives = 162/194 (83.51%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP+ATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPAATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
Match: PSAA_HELAN (Photosystem I P700 chlorophyll a apoprotein A1 OS=Helianthus annuus GN=psaA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.300e-82
Identity = 159/194 (81.96%), Postives = 161/194 (82.99%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP ATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
Match: PSAA_LACSA (Photosystem I P700 chlorophyll a apoprotein A1 OS=Lactuca sativa GN=psaA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.300e-82
Identity = 159/194 (81.96%), Postives = 161/194 (82.99%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP ATAPGATASTSLTWGG DLVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGATAPGATASTSLTWGGGDLVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. TAIR (Arabidopsis)
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 303.1 bits (775), Expect = 2.300e-82
Identity = 156/194 (80.41%), Postives = 159/194 (81.96%), Query Frame = 1


		  
Query: 116 LGLGSLSWADTAIQLQPVFAQWIQNTHALAPSATAPGATASTSLTWGGSDLVAVGSKVAL 175
           LG     ++DTAIQLQPVFAQWIQNTHALAP  TAPG TASTSLTWGG +LVAVG KVAL
Sbjct: 462 LGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGVTAPGETASTSLTWGGGELVAVGGKVAL 521

Query: 176 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGT 235
           LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGF FPCDGPGRGGT
Sbjct: 522 LPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGT 581

Query: 236 CQVSAWDH------------------------SDVWGSISDQGVVTHITGGNFAQSSITI 286
           CQVSAWDH                        SDVWGSISDQGVVTHITGGNFAQSSITI
Sbjct: 582 CQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITI 641

[Close]

BLAST of Spo25555.1 vs. TAIR (Arabidopsis)
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.700e-30
Identity = 79/179 (44.13%), Postives = 103/179 (57.54%), Query Frame = 1


		  
Query: 128 IQLQPVFAQWIQNTHA--------LAPSATAPGATASTSLTWGGSDLVAVGSKVALLPIP 187
           I ++P+FAQWIQ+ H         L  S + P   A  S+ W    L A+      L + 
Sbjct: 453 ILIEPIFAQWIQSAHGKTSYGFDVLLSSTSGPAFNAGRSI-WLPGWLNAINENSNSLFLT 512

Query: 188 LGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFCFPCDGPGRGGTCQVS 247
           +G  DFLVHH  A  +H T LIL+KG L AR S+L+PDK + G+ FPCDGPGRGGTC +S
Sbjct: 513 IGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDIS 572

Query: 248 AWD--HSDVWGSISDQGVVT------HIT--GGN---FAQSSITINGWLRDFLWAQASQ 286
           AWD  +  V+  ++  G VT      HIT   GN   F +SS  + GWLRD+LW  +SQ
Sbjct: 573 AWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYLWLNSSQ 630

The following BLAST results are available for this feature:

BLAST of Spo25555.1 vs. NCBI nr
BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
BLAST of Spo25555.1 vs. TAIR (Arabidopsis)

BLAST of Spo25555.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|11497525\|ref\|NP_054933.1\|	2.4e-81	82.9	photosystem I P700 chlorophyll...	[more]
gi\|1002161918\|ref\|YP_009232042.1\|	7.0e-81	82.4	photosystem I P700 apoprotein ...	[more]
gi\|916439855\|gb\|AKZ22632.1\|	7.0e-81	82.4	photosystem I P700 chlorophyll...	[more]
gi\|408903325\|gb\|AFU96273.1\|	7.0e-81	82.4	PsaA, partial (chloroplast) [D...	[more]
gi\|630716135\|ref\|YP_009027970.1\|	7.0e-81	82.4	photosystem I P700 chlorophyll...	[more]

BLAST of Spo25555.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K1Z9Z3_9LAMI	4.9e-81	82.4	Photosystem I P700 chlorophyll...	[more]
A0A0K0M263_9ASTR	4.9e-81	82.4	Photosystem I P700 chlorophyll...	[more]
K4KDH7_CHRIA	4.9e-81	82.4	PsaA (Fragment) OS=Chrysobalan...	[more]
A0A0B5G9C7_9ASTR	4.9e-81	82.4	PsaA OS=Chrysanthemum indicum ...	[more]
A0A023SZM7_CHRIA	4.9e-81	82.4	Photosystem I P700 chlorophyll...	[more]

BLAST of Spo25555.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PSAA_SPIOL	1.5e-83	82.9	Photosystem I P700 chlorophyll...	[more]
PSAA_CALFG	7.5e-83	81.4	Photosystem I P700 chlorophyll...	[more]
PSAA_EUCGG	9.8e-83	81.9	Photosystem I P700 chlorophyll...	[more]
PSAA_HELAN	1.3e-82	81.9	Photosystem I P700 chlorophyll...	[more]
PSAA_LACSA	1.3e-82	81.9	Photosystem I P700 chlorophyll...	[more]

BLAST of Spo25555.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
ATCG00350.1	2.3e-82	80.4	Photosystem I, PsaA/PsaB prote...	[more]
ATCG00340.1	2.7e-30	44.1	Photosystem I, PsaA/PsaB prote...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 69..93 score: 2.1E-17coord: 108..132 score: 2.1
IPR001280	Photosystem I PsaA/PsaB	GENE3D	1.20.1130.10		coord: 125..286 score: 1.8E-70coord: 1..124 score: 4.0
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 1..124 score: 3.6E-57coord: 244..286 score: 9.4E-10coord: 124..243 score: 1.9
IPR001280	Photosystem I PsaA/PsaB	unknown	SSF81558	Photosystem I subunits PsaA/PsaB	coord: 126..285 score: 2.22E-58coord: 1..124 score: 7.98
IPR020586	Photosystem I PsaA/PsaB, conserved site	PROSITE	PS00419	PHOTOSYSTEM_I_PSAAB	coord: 227..236 scor
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 1..130 score: 1.1
None	No IPR available	PANTHER	PTHR30128:SF8	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1	coord: 1..130 score: 1.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0016491	oxidoreductase activity