Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATTCTAGTTAGAACCTGATTGGGTTAAAATTTTGTTCTTTTCAATTAATCTTATTAGAACTTATCTTGATTTATTCACGTGAAGTGAATTTAATAGACCTTGTTCATTCTTTGCCTAAATTTATTAGAAATTATTGTTTAAGGTTAAAAGAATATAGCCTAATTTCGTAAGTGCTTGATGTTAAGCATGTGAACATAGATTCATTATCTAGCATTGTGCTCGACTTCTGTTTCCCTGTTCGTGTTTTGGTTTTTTTTTTTATAGTCTCTGGCACAGCAACACATTATTTAAATTGATAAAAGCAATTCACTTCCAAAGAGCTTTAGCAAAACACTATGTTTGTTTTAGGACTTTTAATGACCTCCTTTGCTATGTTTCAAACTAATGTTTCTGTTTCGGAAAACTGTTGATTTGTTGTTCTAATGGAGTGTCTTTTTGCAGGTCCTTGCGAAATCGTCGAAGATGATTCCAGGTAAGAAGTGTAACTTTGGTCTGCCTTGTTATTTCGCAAACTATTGTTTGTGAAACCTATGAACTGAAATGGATAGATATCAGGAGTGAACTAATTTCATTTTTCCATGGTTTGTGTATTCTAGTTGTTCAGTGGAATGTAAACAACTTTTGTTCTAGACTTCAGAACTCTATTAGCATCTTTTCCTCACCCCTTGCCATTTATGCAAGTATAATAGTTTTCTTAAGGAGCTTTTGATGATAAGAGATGATTTGTAACTACTTGTGGCGTTGCTTGATGCTTAAGAATCAGAGTTTGTTCTGTAATTTTCCACCACATGCTCATGATGTAGTTGGAAGGGGATTGTAGTTACAAAAGTGGAATACGTAGCTGCCTGTTTCTGTTATAATCAAGCTGGGAACACAAGGATCAGACCCTATTTTTTCAAGCTCAAGCATAGAATGCTTATTCAATTTTCATCCTCCCTTATTTTTTGAATAAATCTTCTTCTTCTTGGGTAGTGACTAGGTAGCAACAGGTTCTTACTGGTGAACTGTTCAAAAGGTCACTTGTGCATGTTGCAGGAGGAGTGGAGTGGGGGAGAGCAAGCCCATCTATTTGTAAGATGTAAAGGCTCAAGTACTACCTTAATACTCCTATAACTAATTGAAGACTTGCAGGGTAAACTTTAAATAATTTCTTTCTTGGAGACTAGATAATATGAGCATTAGTGATTAGTCATCATGATCGAGAGGCTTAATGAAATAACAAATCCACTGTCAATGACTCAATATTATCCTATTTCTGTGTTTTTACCCCCTTTAATAATTACAAAGCATTTATGCTATGGATTTTATCGGTAATACAATTCTCATGGTAAATGTATTATACGTTCATATGAATCATATCTCCGTCTTCTGCAGTGATGCTTATGGGCGCTCTCGTATATGGCATCAGATACGCATATTCGGAGTATATTTGCACACTTCTTGTTGCAGGAGGTGTGTCACTTTTTGCACTTTCTAAGGTAAGATGTACATCAAACTTCTACTTCTAATACCTTAACATCTATTCTCCCTTATATTTAGTTGTCATTCTTGGAGGATGTTGTTGCTTTTGCTAGTATTTTTGGTAATAGAAACTATGATGTACTTGGAGTCTTGGACCTGATGCTTACTGATATTTTGCTCTGCAGACCAGTGCAAAGACCATTAGTAAGCTGGCACGCCCTAATGCACCTCTTGGTTATGGGCTCTGCTTCTTGAACCTTGCTTTTGATGGGTTTACAAATGCTACACAGGATTCAATAACAGCAAGGTATTTAAGTAACTTCTCCCTCTAGTATTACTTTATCAGTTGTCTTACATAGAATTGGTATCAATATCTTGCATGTGCTAATGGTCAGTTAAGATTTGCACAAGTACCGGAATTCTTTGTTTCATACTCTAATCTTTGTTTATCTTAACACTTGTACAGGTACCCGAAAACAAGTGCTTGGGATATCATGTTGGGAATGAATCTATGGGGCACCATATACAATGTGGTGTACATGTTTGGTTGGCCCCAAGCAAGTGGATATGAGGCTATTAGATTTTGCCAGCAACATCCAGAGGCAGGATGGGACATCCTTTTTTACTGCTTGTGTGGTGCTGTTGGCCAAAATTTTATCTTCTTAACCATCAGTCGATTTGGTTCTCTTACTAACACGACAATCACTACCACCCGTAAGTTTGTTAGCATTGTTATCTCTTCTCTTCTGAGTGGCAATCCCCTTTCCACAATTCAATGGAGTAGTGTTGGCATGGTCTTTTCCGGGTTGTCATACCAGATTTACCTTAAATGGCAGAAGCTGCAAAGATTGCAAAAGAAGCGAAAAGCTACATGA ATGGTCCTTGCGAAATCGTCGAAGATGATTCCAGTGATGCTTATGGGCGCTCTCGTATATGGCATCAGATACGCATATTCGGAGTATATTTGCACACTTCTTGTTGCAGGAGGTGTGTCACTTTTTGCACTTTCTAAGACCAGTGCAAAGACCATTAGTAAGCTGGCACGCCCTAATGCACCTCTTGGTTATGGGCTCTGCTTCTTGAACCTTGCTTTTGATGGGTTTACAAATGCTACACAGGATTCAATAACAGCAAGGTACCCGAAAACAAGTGCTTGGGATATCATGTTGGGAATGAATCTATGGGGCACCATATACAATGTGGTGTACATGTTTGGTTGGCCCCAAGCAAGTGGATATGAGGCTATTAGATTTTGCCAGCAACATCCAGAGGCAGGATGGGACATCCTTTTTTACTGCTTGTGTGGTGCTGTTGGCCAAAATTTTATCTTCTTAACCATCAGTCGATTTGGTTCTCTTACTAACACGACAATCACTACCACCCGTAAGTTTGTTAGCATTGTTATCTCTTCTCTTCTGAGTGGCAATCCCCTTTCCACAATTCAATGGAGTAGTGTTGGCATGGTCTTTTCCGGGTTGTCATACCAGATTTACCTTAAATGGCAGAAGCTGCAAAGATTGCAAAAGAAGCGAAAAGCTACATGA ATGGTCCTTGCGAAATCGTCGAAGATGATTCCAGTGATGCTTATGGGCGCTCTCGTATATGGCATCAGATACGCATATTCGGAGTATATTTGCACACTTCTTGTTGCAGGAGGTGTGTCACTTTTTGCACTTTCTAAGACCAGTGCAAAGACCATTAGTAAGCTGGCACGCCCTAATGCACCTCTTGGTTATGGGCTCTGCTTCTTGAACCTTGCTTTTGATGGGTTTACAAATGCTACACAGGATTCAATAACAGCAAGGTACCCGAAAACAAGTGCTTGGGATATCATGTTGGGAATGAATCTATGGGGCACCATATACAATGTGGTGTACATGTTTGGTTGGCCCCAAGCAAGTGGATATGAGGCTATTAGATTTTGCCAGCAACATCCAGAGGCAGGATGGGACATCCTTTTTTACTGCTTGTGTGGTGCTGTTGGCCAAAATTTTATCTTCTTAACCATCAGTCGATTTGGTTCTCTTACTAACACGACAATCACTACCACCCGTAAGTTTGTTAGCATTGTTATCTCTTCTCTTCTGAGTGGCAATCCCCTTTCCACAATTCAATGGAGTAGTGTTGGCATGGTCTTTTCCGGGTTGTCATACCAGATTTACCTTAAATGGCAGAAGCTGCAAAGATTGCAAAAGAAGCGAAAAGCTACATGA MVLAKSSKMIPVMLMGALVYGIRYAYSEYICTLLVAGGVSLFALSKTSAKTISKLARPNAPLGYGLCFLNLAFDGFTNATQDSITARYPKTSAWDIMLGMNLWGTIYNVVYMFGWPQASGYEAIRFCQQHPEAGWDILFYCLCGAVGQNFIFLTISRFGSLTNTTITTTRKFVSIVISSLLSGNPLSTIQWSSVGMVFSGLSYQIYLKWQKLQRLQKKRKAT Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo25765.1 vs. NCBI nr
Match: gi|902188461|gb|KNA11156.1| (hypothetical protein SOVF_137860 [Spinacia oleracea]) HSP 1 Score: 441.0 bits (1133), Expect = 1.200e-120 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
BLAST of Spo25765.1 vs. NCBI nr
Match: gi|731344110|ref|XP_010683236.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 433.0 bits (1112), Expect = 3.300e-118 Identity = 217/221 (98.19%), Postives = 218/221 (98.64%), Query Frame = 1
BLAST of Spo25765.1 vs. NCBI nr
Match: gi|747058262|ref|XP_011075466.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 3 isoform X1 [Sesamum indicum]) HSP 1 Score: 396.0 bits (1016), Expect = 4.400e-107 Identity = 193/221 (87.33%), Postives = 209/221 (94.57%), Query Frame = 1
BLAST of Spo25765.1 vs. NCBI nr
Match: gi|747058264|ref|XP_011075468.1| (PREDICTED: UDP-galactose/UDP-glucose transporter 3 isoform X2 [Sesamum indicum]) HSP 1 Score: 396.0 bits (1016), Expect = 4.400e-107 Identity = 193/221 (87.33%), Postives = 209/221 (94.57%), Query Frame = 1
BLAST of Spo25765.1 vs. NCBI nr
Match: gi|947126958|gb|KRH74812.1| (hypothetical protein GLYMA_01G044200 [Glycine max]) HSP 1 Score: 394.8 bits (1013), Expect = 9.800e-107 Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Spo25765.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXC9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_137860 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 8.300e-121 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
BLAST of Spo25765.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C021_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154380 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 2.300e-118 Identity = 217/221 (98.19%), Postives = 218/221 (98.64%), Query Frame = 1
BLAST of Spo25765.1 vs. UniProtKB/TrEMBL
Match: A0A0B2NVW5_GLYSO (UDP-galactose/UDP-glucose transporter 3 OS=Glycine soja GN=glysoja_008092 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 6.900e-107 Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Spo25765.1 vs. UniProtKB/TrEMBL
Match: I1J5M6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G044200 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 6.900e-107 Identity = 193/220 (87.73%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Spo25765.1 vs. UniProtKB/TrEMBL
Match: I1JBN2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G019400 PE=4 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.500e-106 Identity = 192/220 (87.27%), Postives = 201/220 (91.36%), Query Frame = 1
BLAST of Spo25765.1 vs. ExPASy Swiss-Prot
Match: UTR3_ARATH (UDP-galactose/UDP-glucose transporter 3 OS=Arabidopsis thaliana GN=UTR3 PE=1 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 1.100e-105 Identity = 187/220 (85.00%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Spo25765.1 vs. ExPASy Swiss-Prot
Match: UTR1_ARATH (UDP-galactose/UDP-glucose transporter 1 OS=Arabidopsis thaliana GN=UTR1 PE=1 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 3.700e-98 Identity = 173/219 (79.00%), Postives = 195/219 (89.04%), Query Frame = 1
BLAST of Spo25765.1 vs. ExPASy Swiss-Prot
Match: S35B1_DICDI (Solute carrier family 35 member B1 OS=Dictyostelium discoideum GN=slc35b1 PE=3 SV=2) HSP 1 Score: 137.9 bits (346), Expect = 1.400e-31 Identity = 80/213 (37.56%), Postives = 126/213 (59.15%), Query Frame = 1
BLAST of Spo25765.1 vs. ExPASy Swiss-Prot
Match: HUT1_YARLI (UDP-galactose transporter homolog 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=HUT1 PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.100e-28 Identity = 71/210 (33.81%), Postives = 117/210 (55.71%), Query Frame = 1
BLAST of Spo25765.1 vs. ExPASy Swiss-Prot
Match: S35B1_CHICK (Solute carrier family 35 member B1 OS=Gallus gallus GN=SLC35B1 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 5.300e-28 Identity = 79/202 (39.11%), Postives = 117/202 (57.92%), Query Frame = 1
BLAST of Spo25765.1 vs. TAIR (Arabidopsis)
Match: AT1G14360.1 (UDP-galactose transporter 3) HSP 1 Score: 384.0 bits (985), Expect = 6.100e-107 Identity = 187/220 (85.00%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Spo25765.1 vs. TAIR (Arabidopsis)
Match: AT2G02810.1 (UDP-galactose transporter 1) HSP 1 Score: 359.0 bits (920), Expect = 2.100e-99 Identity = 173/219 (79.00%), Postives = 195/219 (89.04%), Query Frame = 1
BLAST of Spo25765.1 vs. TAIR (Arabidopsis)
Match: AT3G46180.1 (UDP-galactose transporter 5) HSP 1 Score: 77.4 bits (189), Expect = 1.200e-14 Identity = 68/210 (32.38%), Postives = 96/210 (45.71%), Query Frame = 1
BLAST of Spo25765.1 vs. TAIR (Arabidopsis)
Match: AT1G12600.1 (UDP-N-acetylglucosamine (UAA) transporter family) HSP 1 Score: 74.3 bits (181), Expect = 1.000e-13 Identity = 56/203 (27.59%), Postives = 101/203 (49.75%), Query Frame = 1
BLAST of Spo25765.1 vs. TAIR (Arabidopsis)
Match: AT5G59740.1 (UDP-N-acetylglucosamine (UAA) transporter family) HSP 1 Score: 72.0 bits (175), Expect = 5.200e-13 Identity = 68/217 (31.34%), Postives = 93/217 (42.86%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25765.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25765.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25765.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25765.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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