Spo25770.1 (mRNA) | SpinachBase

Overview


Name	Spo25770.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ubiquitin-conjugating enzyme
Location	chr1 : 38683610 .. 38692680 (-)
Sequence length	1359

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCCAGAGTATGTCTCTTATGAGACCGCCATATGCATAAGACCGTTGATGTCAATATTAAAAAAGATAACTATTTGAATAAAAATTATAACTATTTGTTTAGAAGTATAACAATTTTATTGGATAATAGAATCAATAATATTATAATATAATCAGAGCATCTTCAATAGTAAGCTAATTATTAAATTAGCTTGTCATGCCAACTAAGATTTTAAGCTAATTTATTTTCTAGCTAGTTTATATCCCAATAATGGCAAGCTAATATACCAAACTAGTTTGTTATTAAACTAGGTTCACTTTTCAATTAATCATTTAATTTAAACTTTATTTTAATTAAAACTTGCATTCCAATTGGGCAGATTTTTCCTAATTTGCTTGGGCCAAGCTAATTTACCAAAATCACTCCAATGGTTAAGCTAGTAGCTTGAGACTTTTGCAAATTGCAATCAAGTTCCTAGCTAGTAGCTACCACCATTGGAGATGCTCTAACTATTTAATCACATTGAGTAATTGTTTAATTAAAAAATATAATTATTTAAAAAAATACGGAGTATAACTACTTGGTATGAAGTTGGTCTTATACAAGTTTTTGTACCGCTCTTATCCTTTTGGACCTCCGTAGTTGGGTGGTTTTACCACGTTTTATTTGTCCACCAATCAGTGATGACCACCGCTCTATTTCCATCCCCGGAGGAACACACTTTATTCAAAAGTTTTGGACCAAAAGAATAACCTCCTTCATTGACACATTCTTCTCCGTTACTATGACAAAAGAATAACCCTTTCATCGATACATTCTTCTCCGTTACTATGCCTATTTATTTTCTGCAATATATTAAGCCTATGTTAAAAAAAACTAAAAAAACTACTCCGTATGACTTTCTTTTGGAATGGAAAAAAATGACACAAATACGCAACAAAGATAGGCGGATAGCGTAAATGAGAAGCAGAAAATAATAATTGAATGGAAGATATTACTGCCAATAAATATACTACGTACTTAATATCTCATCAAAAATAAATTAGCCAAAATTAGTGGATAGAATTTGCAAATTGTATAAGTAGGGGACGCTGACCTGATACTCCCTTCTTCAGTTCTTTCACAGGTTATCTTCTGCCTAAGCACTCTCGACTCGACTCGACTCGACTCGAGAATATCGTACTCCGTAATACTCTTCAGAAGTTCTACTTCCCTTTAAATGGAGGAAGTTGCTTACCTAGTCTTCCCTAGGTAAGTAGAACTTTCCATGGAAATTCTAATTTCCTATGATCAACCAAACAAGAATGCTCAATCCCTAAGAAGTTAAAACATATGAAAATTGCAAATAAAAAAAAAACTATTCCGTAAATTAATATAAATAAAATAAATTATTTTATTAACATGTTGACATTCCAACTTAAAAATCACGGCTCCGTCACTATACAAGTATAGTATAGTACTCCGTATTACAGCACTCCATTTCTCAACGAGTATTACAACATGCTTTGTTCATCATGTACTATATACTCCGTAATTCCAATATTCTCTCTCCTGCTTTCCTTTTCCCCGCTTTCTGTCTAACACCGAATCTAATCGATCAATGAAATTCCATTTCTAACACCGCGTACTCTCTCACCTCCTCATTCTTCTTCTTCATCTGCTCTCTTTCTCTCTCCTAAATTCCTTCTTTCTCCGCCATATTCCCCCAATTCTGAGGTCCTTTTCGTGAATTCTCCCCCTTTTCTCGCCGCAGTTTCTTCCCCAGGTAAATCCAATTTCGCTGCTTTTTTCTGAATCCCCCTTTTTTTGTTTAAGTTTTCTCGAATTCGTATTTTTATGGGGTTTTCTGCAAGTAATTGTTGAAATTGGGTGACAATTAGTCGTGGTCTTTGTGAAAACTTTCTTTGATTAGGTTCTTGTTGTTCAACCCTAACTTGATTCGCTTTTCTGCTGTTGCTGCAAATTTCCCTACCTTTTTCTTTAATAATTGACATGTGTTGGTTATGAAGCCTATTATAGATCTTAATTACTGTTTCATTTATTTATTTTTGTGAAATTTGGGCTAATTCTTTCAATTGGGTTGCTATTATGTTTATCAAATGAGAAATTAATTGGTGTGGGATAGTTAGCAAATCTTTTGGCAAGAAAGTTGTTTAAGTATGATTGTTTTAAATTTGATTAGTCTTTTGTGACGTAGATGCAGAAAACTTCACTAAAGATTGTGATTTCCAATTTCTATGTAAGCGAATTTTAGCTTGTATTGAGGTATGATTGTAATTTTTCATTTCAATGATTATAAAGTGTGAACAAGAATTTGAGTGGTTGTAGAAAGTGAGCGACTTTTCATTGCGAAAGAAGTTACTTCAGTATGAATTCTTGTAATCATGATTAGACTAACCCGGAACGTGGGAAAAACTTTCCTGATAAATGTGATATTACCCTTTCGTTTTATGCTGAGGGTTTTCTTGTTTGCATAATACTTGGTGTGGTTTTTCAGTGGATAGTCATTTTAGGAATATATGTAATGCTTTCTGTCGTGGTTGGCTATATCCTAGTAAACAGTTCTTGTTAAATTGAAGAGTCTCTTTACATATTTAGAGTCATTTTTGCTTTCGCTGTTCTAAAGTTACTCCCTTGGTCAATGTTTTAGGCGGTGAGGATGTCAACTCCTGCAAGGAAGAGATTGATGAGGGATTTCAAGCGCCTGCAGCAAGACCCACCAGCTGGGATTAGTGGTGCCCCCCAAGATAATAACATTATGCTATGGAATGCTGTTATATTCGGGTAGGCTAAAATCATTTACATATCTTTTTCTGGTGGAATTTGTTAATCTGCAAGCTCAAAGCATACGCATTGGTCTAATTACTTTTTCTTTTTTGATTTGAATGCAGTCCTGATGACACCCCTTGGGATGGAGGTAATCAGAAGTTCTGAAGCAATTTGAGTTCATGTGGATTATTCATGTCATAGTTTGGTTATGATTCTTAGTTTGCTTGTTGGCTTTACTTATATCTTCTGCTGTGTACAACCACACATGCTGAATATGTTGTTCCAAACTTTATGCCACTTGTCAACATTCCGTTGTGTAGAAGATCTCTTCTTTCCGATTTTATCTTTTACCATTCATAATACATTTAACCATAACCTTTGCATCACCACCACAAACATCTTTTGAACGTGATATTTCTTAACAACCCAATTAAACCAACCCATGCAGCAAACTCTGTTGCACACCCTGTTAATAGCACTCCTAGAACATGGAAATGACCTTCTTAACTTTATTTTTCTTCTCACTTTTAGTCACGATAATGATTAAGCTTTGATATTGTTCCTTAACTGCTCCAGTCTCTAACTGAGTGGATGACTTATTCATGGGATATATGGTCTTTGTACTCATTAAAAAACATTCTACTTTGTATTTGTTAATGATATGATGTTCTTGTATATCTGGCTGGTCCCTGGTGGTCGTTTTGTTGTTTTAATAGTTATTCACCGTTTCCTACTCTGTGTATAGTAGCATTGCAAATGTGTTCTATTGAGGAAAGGATCTAAGGCGTATCTAGTTATTAATGGACAATGCTTTTTCATTGTCAGAGATGTATAGAGTATTTTAGAGAAAAAGGCTTTTGGAGATGTGCTTTACGAAGCTTTTGGTTTGTTTTTAACAAAAAGTTTCCAAAATTATTCTGTATGTTGGTGTTATTTTACAGACTTGCATAACTTTATGTACTCATTCTATCTCGACTTATTTTCTGTAATTATTTTCAGGCACGTTCAAATTGACACTGCAGTTTTCTGAGGACTACCCAAATAAGCCTCCTACAGTCCGCTTTGTGTCCCGGATGTTTCACCCAAATAGTAAGTCACTAATTCTATATTTGTTGTCCTGTTTGATAACACTATTCATGTTTTAGTTGTATTCACTGCTCAGTGTGCTATTGCTGCTCTGCTTAGTTATAGTAAGGTGCCAGTTCTGGTGCCTGATGTTTTATCTGGAGGCTAGAGCCTTTTTTCTGTATAATTGTATCACACACGTTGTTTTTGTTTTAAACGCTGTTAATCCATCACATCTATGTTATACTTCCTCCATTTTTTGTTTAGTTGTGATGTTTCTAATTTTTTGCGCTATTCACATAATGTAATTTGACTGTCATTAGGGATTTATATTTAAGTAAAAAAATATTGTCATTTGAAATCTTGTTAAATTCATCTCAATATAACTTTTTTATACTCCCTCCGTCCCGGAATACTCGACCCGGTTTGACCGGCATAGAGTTTAAGGGACTTGAATTGACTTATTTAATTTAATAGGTAGTAGTTGATAGTGGGGTATTATTTTAATGTAGTTAGTGGGAGGTGGGTTAAGAGGTGGGGTTGGGGGAGAGTAGGAGTTGAATTTTTAATTATTTTTTGTATGGAGTAGGGGGTAGGTGGGTTAATAGGGGTGGAGTGAGAAATAATATAATATTGTTAGAATATTTCCATTTTTAGAAACAGGTCAAGTATTAAGGGACGGCCCGATAAGGAAAACAGGTCAGGTATTCCGGGACGGAGGGAGTAATTTTTACTTATTGGTATTTGGTAATTGAAGATATCAAGTTGAAGTTATACACTGGCAAGTGCGAAAGTGGAAGTGTTGCAACTAATAAAAAATAGATGAAGTACAATTTTTTAACTTTTAGGTGCCTGTGCAAAAGAATGTTAAATGAATCAGGCTTTTAAGTGATACAGTCTACATCAGCTGAAGGTACAATATCATGGAATATTTAGGTAGAGGCAGGATTTTGTTAATTGATTTGAAGCAGGATTTTGACCCTTATATGATTATATCATAATACATGGAAGTAACCTAATACCTATAAAAAAAATGCTGTGTGTTGCTTCATTGTACTTCGACTAGCTTGTTTTATGATGATTGTTTCAAGATGATCTTGCATGGAGTATGTGATGATTGAAAACTTCATACTTATTTCTTAGTTGCAAAGCAGCAATTATACTTTATTCTTATTTTAGTTTGTTGGCTTCAGCTTACTAAAAGATTTATGTATTTTAAGGTTTTTGCTGCAATTTTCCTATTCTTCTTATTCAAATAAACAACTTGCTGAAGCTGATTTCTTGATCCGAAAGGAGTAAATCCATCTGTAACTTGGTTCTTTAGCTGCTTTTGACTTTCTTTTGCATGTACTTGGTTGTCTGTACCTGTGGTTTATATAAGTGAACAAACCTGCCAATTTCCTGTTCTAACCTTATCTGTATGTGTGTTTTTTTTGGGTGGGAATTTATTAGTTTATGCAGATGGAAGTATCTGTCTTGACATCCTACAAAACCAATGGAGTCCCATTTATGATGTTGCTGCTATCCTAACGTCAATTCAGGTAACAAGTTAGCCTTGAGGAATTTCTTGGGATTTTAGGCACATATTTATAATTAGTATCTTTTGTTTATAGTAGTAATTAGTATTTTCTTTTCCATGCTTGTGATTCACTGAACAGTTCATTTTGATCCATTTTGAGAAAGAGTGAAAAAGTGTGTTGAAATGGTTTTATTCAAATAAATATTTCTGATTTGTACATGTGGACTTGGGTTCTTCATTCTTCAATCATGTAGTGCAATTTGCAATCGCAGGTGGTCTACCTCTCTTTGAGTCAGACCACCTATAGCAATATAAGTCTGTTTTTGTTTACAGTGTAGTGTCGTTTTTGTTTTATAAGTCCTCTCTTTGAGTCTTAATACCTGTGGCAATACAGTTCCTCTCACATATTGGAAGTATGGAATGATATGTTAGTGTGCATTGGTTGCATTTGAGAGAATAGTTGGTAATGGTGGCTCGAGTATAAGAACTTCTCTATGTTCATGTAAGTATGTAACGAGCTATAGGAGAGTTTTAGCTTTTGAATCCTCGTTCTATCTAGTGCTTTAAGAACCTCCAAGTATAGAGAGGTATTTTTTTTATACAGGATACTCTGAACTCTGAAGATGAGAAGGGTGTTTGTTTTTCAGAAGTGCACTTCCTCGAGTAACCTGAATATGGGAAATGGGATGAGATTGACCTTAAAACTTAAGAATTCGCTGGAAATAGAGGTGTACTGCGGTGCCTTGTTGTATATATTGCTTTCAATTTTCCACGAAACTTTTGAGGAAGTGGGTTATGAAGATCCGCAAGGCTGACGATTAATTTTTAATAGGTATATCTAGTAATCAGATTGACCTAAGAGGGTTGATTTGTCTAAGGTTGGAGTCTGTTGGTCTTTATTGGGGTGGTCACTCTGGAGTTTTCTTCTTTTCTCTTTTGTGAGTATATAACTTGTTAGGCCAAGACTCCACTATAGGCCCTCCATGGTCAGTTGGTTTATATTTGGTTTTGTAATTGCGGTTCCTTCTAAGCATGCGTAATTGCAATTGCTTCTTGTATGCTACGGAGTACACTTGAAATAGTTTCTATGGTTTGTTAGAGGGGCATAAAGTTATTTATTGGAGTTACTGTGGGATTTTTATTGTTCATTGACATCTAAAGCTTCAGGAACCTTTCTAGAAATCTTCTGCTGATTTGTTATGACGGTGGTGCTTTGTGCTCTTATTTCAAGTTACTTATTTTATTCTTACACATCTTTTTTTACGAGGATGATTTATTTACTCGTATAAGGTTTGAGAATGGATCAAGCTAATGAATTCTTCTAGTGCCCTTGAATAAAAAGGAAAATTGTCATGGGGAAAGAATTCTAAGTGAACAATCGCAAATAGGATTCAATTAATTTTTTGTTAGAATTGTGCTTAATCGGTACTAGGAGGTTTAGGGTCTGCTGTTGATGGGTGTCGGTCTTAGGTGCAAAGACTTTGTGCTGAACGAGGTAGGATGTTTTGGGTTCAGATGAAAGTATATATGCTATGGTGCTTGCCTGCTTTCTAGTCGCCATGCTCTGTGAACACGTGAAATTCTAAGTAGCCATCTATTCTTTCATTCCAGTTCAGACAAAAGGTTTGGCACAAATTGTTGAATAATGAATAATAAATTAGGAAATGACGAGTATTTGCAATCTATTCATTCTCAAGTAATCACATACTATATCAAAACCTTTTATAGGCTCATTAATCACACAACATTACTGAAAGTTAGCACCGTAAGCAAAAAATGGAATTGCCCATAAACCCAATGACGAAATGCATACACTGACCGTGTCCCCAAAACTAAGGATTGGCAATTTGAGCATTACTTTCTAACAAGAAGTTGCAATGTTAAATGTGTTAATTTTAAATTTTAGTTGCTGCAGAAGACTCACTGAGGTCGGTTTGTGTAAAAGCTTTCCATGAATGCTTGTTTTTTGAAGGTTTGTAGGATAAGAATGGTTGGAATCTATTTTATACGACCGTATCAAGAAGAAACATTTTGTAAAAACCAAGGGAAGTGTTGGCAGTCAACTTGGATCATTTTAACCTTTAATGCTTTGCAGTAATCGTGTTGGGGTTTTTTTCAAACAGGACATGCGCTAGATTAAATAAATTGTTGGATACTTTTTTAGAGGAGGTGAAAATGCTACCCCTTTTTGCCTCAAAATAGAATGTTGAGGTCAACCTTGCAAGTTTTGGCCATTTCAATGTGTCGTCGTTAAATTCGACGATCAAAAGTTAGTAAGCTTTGATCATAAAATAAGTACAGCTTCATATTTGTTACAGAGCTTGTTCGAGTCAATGTTCAAGAGAATGTAGCACCAAGAGACCAAGGGTTTTTTGTGTTAGGGGGTTTTGAGATTTTATGATAAACTAGTTTGAGAACATAAAGATAGCCTTTTTTATGGTTTATCCGCCATCCTACACAGATAGAGAGGCAAAACTGGTTTCGGAGGATCTTTTTCGCACCTATTGTGCTTTGTTGACTTGTTGTTGTTATTGTTTTCTATTACTCGCTATGAATTTTAGGTGTGGTTTGAGCTTCATATGTGATTCTTGCATTTCTAGCTAAAATAAAGCTCAACTAATGCCTTTGTTTTGCTTAATTTGATGCTATACTAAGTATGTTATATTTGTCATTCAGCTTCTTAAGCAATATGGGTTTCATCCCTTCCTCCCTCACCTGACTTGGTGTGTTGTTTACAGTCTTTGCTATGTGATCCGAACCCAAACTCTCCTGCAAATTCAGAAGCTGCACGGATGTTCAGTGAGAACAAGCGTGAATATAATAGGAGAGTGCGTGAGATAGTCGAGCAGAGTTGGACTGCTGATTAATCCCTGCTGATGAAGTGTATGCATTGTATCTGAGAATGAAGAATTGGGTCCTTAAGTTGCATGTATGGCTCATTTGAGCAAGACTGTGTTAGATTGTTGCCTTACTGCTTGAATCTTGACTTAGCAATAAAATTCTTATTGTTCTTTAGGTGTGAGAATTGAGATCTTATCCCAAATCCAGATGCTATTTGTTAATTTATAGATTATAAATTCATAATCAACATAGACAATTCCCAATTCTGAAAGTTAAAACCCATTGTTTATGTCCTGTGATTGGTAATTGTTATAGCTGACCGGCGAATGTTATGGTTAAAGTCTTGGGGGTGTAATCTAAAACCTGGGACTAAATTTCGCTTATACCACTGTCTGATGTATAGTTTTTTTGTGTGTGTGTGTGTTAGCACACGGTTCACCCTTAGGGCACGCTTGGATTGGGTGTAATGAATTATGGGGGTAATAAAAGTCAAATCACCATAATAAAAGGACAATGAAGGTGAATTGAGGTGGTTGCAAGGAGGGTGGTGTGGTAGTATTGTGATGAGAAGTCGTGATAGTGGTGGTGTTGTGAGGAGAAGGGAGGAAGAGGGGAAGTAATTACCCCCCATATGAGGGTAATAATCACCCTAGTGGGATGGTGGGTAACTATTCTTCCTATGATGAGGGTATTTGTTCCCCCTTCCCTTTTATTTTCTTCTTGCCAACAATAGCTTGTTCCCTTTGCCACCACTTCATCCCCTCATCATCACCTTTAATTACCTTAGTTAGACTTTTATTAACCCTTTAATACATTACCCTCAATCCAAGCATGCCCTTAAGGGTAATCTGGATTCAGGCGAGTTCTGGGTGGATAGGTTCCAGTCCCCTCCC

mRNA sequence

ATGAACGCCAGATTTCTTCCCCAGGCGGTGAGGATGTCAACTCCTGCAAGGAAGAGATTGATGAGGGATTTCAAGCGCCTGCAGCAAGACCCACCAGCTGGGATTAGTGGTGCCCCCCAAGATAATAACATTATGCTATGGAATGCTGTTATATTCGGTCCTGATGACACCCCTTGGGATGGAGGCACGTTCAAATTGACACTGCAGTTTTCTGAGGACTACCCAAATAAGCCTCCTACAGTCCGCTTTGTGTCCCGGATGTTTCACCCAAATATTTATGCAGATGGAAGTATCTGTCTTGACATCCTACAAAACCAATGGAGTCCCATTTATGATGTTGCTGCTATCCTAACGTCAATTCAGTCTTTGCTATGTGATCCGAACCCAAACTCTCCTGCAAATTCAGAAGCTGCACGGATGTTCAGTGAGAACAAGCGTGAATATAATAGGAGAGTGCGTGAGATAGTCGAGCAGAGTTGGACTGCTGATTAATCCCTGCTGATGAAGTGTATGCATTGTATCTGAGAATGAAGAATTGGGTCCTTAAGTTGCATGTATGGCTCATTTGAGCAAGACTGTGTTAGATTGTTGCCTTACTGCTTGAATCTTGACTTAGCAATAAAATTCTTATTGTTCTTTAGGTGTGAGAATTGAGATCTTATCCCAAATCCAGATGCTATTTGTTAATTTATAGATTATAAATTCATAATCAACATAGACAATTCCCAATTCTGAAAGTTAAAACCCATTGTTTATGTCCTGTGATTGGTAATTGTTATAGCTGACCGGCGAATGTTATGGTTAAAGTCTTGGGGGTGTAATCTAAAACCTGGGACTAAATTTCGCTTATACCACTGTCTGATGTATAGTTTTTTTGTGTGTGTGTGTGTTAGCACACGGTTCACCCTTAGGGCACGCTTGGATTGGGTGTAATGAATTATGGGGGTAATAAAAGTCAAATCACCATAATAAAAGGACAATGAAGGTGAATTGAGGTGGTTGCAAGGAGGGTGGTGTGGTAGTATTGTGATGAGAAGTCGTGATAGTGGTGGTGTTGTGAGGAGAAGGGAGGAAGAGGGGAAGTAATTACCCCCCATATGAGGGTAATAATCACCCTAGTGGGATGGTGGGTAACTATTCTTCCTATGATGAGGGTATTTGTTCCCCCTTCCCTTTTATTTTCTTCTTGCCAACAATAGCTTGTTCCCTTTGCCACCACTTCATCCCCTCATCATCACCTTTAATTACCTTAGTTAGACTTTTATTAACCCTTTAATACATTACCCTCAATCCAAGCATGCCCTTAAGGGTAATCTGGATTCAGGCGAGTTCTGGGTGGATAGGTTCCAGTCCCCTCCC

Coding sequence (CDS)

ATGAACGCCAGATTTCTTCCCCAGGCGGTGAGGATGTCAACTCCTGCAAGGAAGAGATTGATGAGGGATTTCAAGCGCCTGCAGCAAGACCCACCAGCTGGGATTAGTGGTGCCCCCCAAGATAATAACATTATGCTATGGAATGCTGTTATATTCGGTCCTGATGACACCCCTTGGGATGGAGGCACGTTCAAATTGACACTGCAGTTTTCTGAGGACTACCCAAATAAGCCTCCTACAGTCCGCTTTGTGTCCCGGATGTTTCACCCAAATATTTATGCAGATGGAAGTATCTGTCTTGACATCCTACAAAACCAATGGAGTCCCATTTATGATGTTGCTGCTATCCTAACGTCAATTCAGTCTTTGCTATGTGATCCGAACCCAAACTCTCCTGCAAATTCAGAAGCTGCACGGATGTTCAGTGAGAACAAGCGTGAATATAATAGGAGAGTGCGTGAGATAGTCGAGCAGAGTTGGACTGCTGATTAA

Protein sequence

MNARFLPQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25770	Spo25770	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25770.1	Spo25770.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25770.1.CDS.7	Spo25770.1.CDS.7	CDS
Spo25770.1.CDS.6	Spo25770.1.CDS.6	CDS
Spo25770.1.CDS.5	Spo25770.1.CDS.5	CDS
Spo25770.1.CDS.4	Spo25770.1.CDS.4	CDS
Spo25770.1.CDS.3	Spo25770.1.CDS.3	CDS
Spo25770.1.CDS.2	Spo25770.1.CDS.2	CDS
Spo25770.1.CDS.1	Spo25770.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25770.1.utr3p.1	Spo25770.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25770.1.exon.7	Spo25770.1.exon.7	exon
Spo25770.1.exon.6	Spo25770.1.exon.6	exon
Spo25770.1.exon.5	Spo25770.1.exon.5	exon
Spo25770.1.exon.4	Spo25770.1.exon.4	exon
Spo25770.1.exon.3	Spo25770.1.exon.3	exon
Spo25770.1.exon.2	Spo25770.1.exon.2	exon
Spo25770.1.exon.1	Spo25770.1.exon.1	exon

Homology

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BLAST of Spo25770.1 vs. NCBI nr
Match: gi|296086416|emb|CBI32005.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 325.5 bits (833), Expect = 5.400e-86
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 1


		  
Query: 8   QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 67
           QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 36  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 95

Query: 68  LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 127
           LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 96  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 155

Query: 128 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 156 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

[Close]

BLAST of Spo25770.1 vs. NCBI nr
Match: gi|700196716|gb|KGN51893.1| (hypothetical protein Csa_5G604380 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 4.600e-85
Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 1


		  
Query: 3   ARFLPQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG 62
           AR  P  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG
Sbjct: 69  ARLRP--VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG 128

Query: 63  TFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 122
           TFKLTLQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS
Sbjct: 129 TFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 188

Query: 123 LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 189 LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 227

[Close]

BLAST of Spo25770.1 vs. NCBI nr
Match: gi|922335550|ref|XP_013445765.1| (ubiquitin-conjugating enzyme [Medicago truncatula])

HSP 1 Score: 320.9 bits (821), Expect = 1.300e-84
Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 1


		  
Query: 6   LPQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 65
           L    RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK
Sbjct: 11  LLMVARMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 70

Query: 66  LTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 125
           LTLQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC
Sbjct: 71  LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 130

Query: 126 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 131 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 168

[Close]

BLAST of Spo25770.1 vs. NCBI nr
Match: gi|645229882|ref|XP_008221668.1| (PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Prunus mume])

HSP 1 Score: 320.9 bits (821), Expect = 1.300e-84
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 1


		  
Query: 10  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 69
           +RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ
Sbjct: 1   MRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 60

Query: 70  FSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 129
           F+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP
Sbjct: 61  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 120

Query: 130 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           NSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 154

[Close]

BLAST of Spo25770.1 vs. NCBI nr
Match: gi|568215047|ref|NP_001275156.1| (ubiquitin carrier-like protein [Solanum tuberosum])

HSP 1 Score: 319.7 bits (818), Expect = 3.000e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
Match: D7TND2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01770 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 3.800e-86
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 1


		  
Query: 8   QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 67
           QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT
Sbjct: 36  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLT 95

Query: 68  LQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 127
           LQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP
Sbjct: 96  LQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDP 155

Query: 128 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 156 NPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

[Close]

BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
Match: M0ZLF5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001314 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 4.900e-86
Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 1


		  
Query: 3   ARFLPQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG 62
           A F  QAVRMSTPARKRLMRDFKRLQQDPPAGISGAP DNNIMLWNAVIFGPDDTPWDGG
Sbjct: 40  AAFNTQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPYDNNIMLWNAVIFGPDDTPWDGG 99

Query: 63  TFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 122
           TFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS
Sbjct: 100 TFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 159

Query: 123 LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           LLCDPNPNSPANSEAARMFSENKREYNR+VREIVEQSWTAD
Sbjct: 160 LLCDPNPNSPANSEAARMFSENKREYNRKVREIVEQSWTAD 200

[Close]

BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KQJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604380 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.200e-85
Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 1


		  
Query: 3   ARFLPQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG 62
           AR  P  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG
Sbjct: 69  ARLRP--VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGG 128

Query: 63  TFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 122
           TFKLTLQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS
Sbjct: 129 TFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 188

Query: 123 LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 189 LLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 227

[Close]

BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
Match: A0A072TRF9_MEDTR (Ubiquitin-conjugating enzyme OS=Medicago truncatula GN=MTR_8g468530 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.200e-85
Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 1


		  
Query: 6   LPQAVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 65
           L    RMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK
Sbjct: 11  LLMVARMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFK 70

Query: 66  LTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 125
           LTLQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC
Sbjct: 71  LTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 130

Query: 126 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 131 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 168

[Close]

BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
Match: A0A059CYX0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00440 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.100e-84
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARMFSENKREYNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 2.700e-85
Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARMFSENKREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 2.700e-85
Identity = 149/152 (98.03%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.300e-84
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.000e-84
Identity = 146/152 (96.05%), Postives = 150/152 (98.68%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARM+SENKREYNR+VRE+VEQSWTAD
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.300e-75
Identity = 131/149 (87.92%), Postives = 143/149 (95.97%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL F+
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSW 161
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Spo25770.1 vs. TAIR (Arabidopsis)
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2)

HSP 1 Score: 315.8 bits (808), Expect = 1.500e-86
Identity = 149/152 (98.03%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARMFSE+KREYNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. TAIR (Arabidopsis)
Match: AT1G14400.1 (ubiquitin carrier protein 1)

HSP 1 Score: 313.5 bits (802), Expect = 7.500e-86
Identity = 147/152 (96.71%), Postives = 152/152 (100.00%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQFS
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSWTAD 164
           PANSEAARM+SE+KREYNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

[Close]

BLAST of Spo25770.1 vs. TAIR (Arabidopsis)
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3)

HSP 1 Score: 282.3 bits (721), Expect = 1.800e-76
Identity = 131/149 (87.92%), Postives = 143/149 (95.97%), Query Frame = 1


		  
Query: 12  MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFS 71
           M+TPA+KRLM DFKRLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL F+
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 72  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 131
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 132 PANSEAARMFSENKREYNRRVREIVEQSW 161
           PAN+EAAR+FSENKREYNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

[Close]

BLAST of Spo25770.1 vs. TAIR (Arabidopsis)
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9)

HSP 1 Score: 145.2 bits (365), Expect = 3.500e-35
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 1


		  
Query: 16  ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFSEDYP 75
           A KR++++ K LQ+DPP   S  P   ++  W A I GP D+P+ GG F +T+ F  DYP
Sbjct: 32  ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91

Query: 76  NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 135
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 92  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151

Query: 136 EAARMFSENKREYNRRVREIVEQSWT 162
           E A M+  +K +Y     E   ++WT
Sbjct: 152 EIAHMYKTDKNKY-----ESTARTWT 172

[Close]

BLAST of Spo25770.1 vs. TAIR (Arabidopsis)
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10)

HSP 1 Score: 144.1 bits (362), Expect = 7.800e-35
Identity = 67/146 (45.89%), Postives = 93/146 (63.70%), Query Frame = 1


		  
Query: 16  ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFSEDYP 75
           A KR++++ K LQ+DPP   S  P   ++  W A I GP ++P+ GG F +T+ F  DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61

Query: 76  NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 135
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 136 EAARMFSENKREYNRRVREIVEQSWT 162
           E A M+  +K +Y     E   +SWT
Sbjct: 122 EIAHMYKTDKNKY-----ESTARSWT 142

The following BLAST results are available for this feature:

BLAST of Spo25770.1 vs. NCBI nr
BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
BLAST of Spo25770.1 vs. TAIR (Arabidopsis)

BLAST of Spo25770.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|296086416\|emb\|CBI32005.3\|	5.4e-86	99.3	unnamed protein product [Vitis...	[more]
gi\|700196716\|gb\|KGN51893.1\|	4.6e-85	96.8	hypothetical protein Csa_5G604...	[more]
gi\|922335550\|ref\|XP_013445765.1\|	1.3e-84	96.8	ubiquitin-conjugating enzyme [...	[more]
gi\|645229882\|ref\|XP_008221668.1\|	1.3e-84	98.7	PREDICTED: ubiquitin-conjugati...	[more]
gi\|568215047\|ref\|NP_001275156.1\|	3.0e-84	100.	ubiquitin carrier-like protein...	[more]

BLAST of Spo25770.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
D7TND2_VITVI	3.8e-86	99.3	Putative uncharacterized prote...	[more]
M0ZLF5_SOLTU	4.9e-86	96.8	Uncharacterized protein OS=Sol...	[more]
A0A0A0KQJ6_CUCSA	3.2e-85	96.8	Uncharacterized protein OS=Cuc...	[more]
A0A072TRF9_MEDTR	9.2e-85	96.8	Ubiquitin-conjugating enzyme O...	[more]
A0A059CYX0_EUCGR	2.1e-84	100.	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo25770.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
UBC2_MEDSA	2.7e-85	98.0	Ubiquitin-conjugating enzyme E...	[more]
UBC2_ARATH	2.7e-85	98.0	Ubiquitin-conjugating enzyme E...	[more]
UBC1_ARATH	1.3e-84	96.7	Ubiquitin-conjugating enzyme E...	[more]
UBC2_WHEAT	5.0e-84	96.0	Ubiquitin-conjugating enzyme E...	[more]
UBC3_ARATH	3.3e-75	87.9	Ubiquitin-conjugating enzyme E...	[more]

BLAST of Spo25770.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G02760.1	1.5e-86	98.0	ubiquiting-conjugating enzyme ...	[more]
AT1G14400.1	7.5e-86	96.7	ubiquitin carrier protein 1	[more]
AT5G62540.1	1.8e-76	87.9	ubiquitin-conjugating enzyme 3	[more]
AT4G27960.2	3.5e-35	45.8	ubiquitin conjugating enzyme 9	[more]
AT5G53300.1	7.8e-35	45.8	ubiquitin-conjugating enzyme 1...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 19..155 score: 9.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 18..150 score: 47
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 10..158 score: 1.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 7..161 score: 2.36
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 88..103 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..163 score: 1.9E
None	No IPR available	PANTHER	PTHR24067:SF120	UBIQUITIN-CONJUGATING ENZYME E2 1-RELATED	coord: 1..163 score: 1.9E
None	No IPR available	SMART	SM00212	ubc_7	coord: 18..161 score: 1.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016874	ligase activity