Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAATCACAGGACAAAACAATGGATACTGCGACAACAGTTGGCTATGATGCTTACTTTGAGACAGTTCAAAGTAGAAAAAAGTTGCCCATTTCGTTACAAGAGACATTGACATCTGCATTTGCAAGCATACCTGTTTCGTCCTTTCCAAAAGTACCTGGTGGCAAAGGTGGTTATCTTACTGGACATGGGTTTGTGTCCAAGTTAAGCTTTTTCATTGAGTTCTTTTACGATGATGGAAATCGCATGTATTTTTGTTTTGCAGTGATAGAGATTTCAGCAGAAACATCAGTATCTGATACTGTGAAGGTTCTCTCGGAATGCAACATACTCTCAGCACCGGTAACAGATATGGAGAAAGCCAACAGCAATGATTGGAAGGAGAGGTATATCGGGATAATAGACTATTCGGCGATTGTATTGTGGGTGTTACAAGGTGCTGAGCTTGCTGCTGTAGCTTTATCTGCAACCTCTGCTACAGCTGCTGGAGTTGGAGCAGGTGCAATAGGGACTTTAGGAGCAGTGGCACTTGGTGCCACTGGCCCAGTTGCGGTTGCTGGGTTAGCTGCTGCAGCAGTTGGGGCAGCCGTGGCAGGTGGCTTAGCAGTGGACAAAGGGATGGGAAAGGATGCTCCAACTGCTGCTAGTGAGTTAGGTGATGATTTCTACAAAGTTATTCTGCAAGAAGAACCCTTCAAGTCAACCAAAGTATGTTATTCAGTTTTCAATTTGCCTATGAAATATTTGGCAAGCAAAATATAGTATTTTCCATTGATTCTTGGTAATATAGTATCTTTGCATTTCAGGTCAGGGAAGTTGTGAAATCATTCAGATCGACGCCATTCCTTCCAGTTTCAACAGAGAGCAATATGTTGACGGTTTTATTGCTTCTATCAAAGTATAGGATGAGAAACGTACCAGTAATCGAACCAGGAAAGGCTTTCATGAAGAATTTCATCACTCAATCTGCTGTTGTGAGGGGCCTTGAGGGATGTCGTGGACTAGATTGGTTTGATTGCATTGCTGCACATCCCATTTCTGACTTGGGCCTTCCTTTTATGTCACGCGATCAGGTAATTGCTCCTGCTACTATCATTTAAGTCACCCTATTTGACCTCGCACATGTAATATGTTGAACTGAATTCATCTGTTGGCAGGTTGTGAGCATTGACAGCAGTGAGCTGATTCTGGAGGCATTTAAGCGGATGAAGGACCACCACATTGGTGGCCTTCCGGTTGTGGAGGGACCAAAGAGGAAGATTGTTGGTAATTTGAGCATAAGAGATATCAGATACTTGTTACTCCAGCCAAACCTTTTCTCCAACTATAGGTATATTGTTTACCCATCAACTTCAACTGAGATTAATTCACAGCATATTTCATGTCCTTATCTTTTGTTTTCCTTATCAAGCTTTTGTATCTAAATCATAGCTTGTGATTGATGCATTGAGAAAAATCGCAAACTTCAGGCTCAAAGGCTATGTTACGTGGATTCTTGTTTTACAGTTTAAGTATCCATGCTAGATATTTAACAATACGAGTTATATGTGAGCACTTGGAAACATGTAAAATCATCAGAAAATAGTAAAAGTCGAACACATGGGTGCGTACTATATGAGATATTGGATTATGTTGTGTTAAAAGCTGAGGTAAATTAACAACTTAACAAAGTTTGATTTGGTTAATAAGCTGATCATATATCTTATATAAGATGTGTCACTCAAAATACAACCTTAGAATTACTAGCTAGTCAAATACAGAGATTTTGTATAAAGAAAAACACGATTGAAAACTTGAGTGAAAATACTCATTTCCCAGTATTATCTCATTTGCAAATTGCATATGTAGTTAATTCTCACAAGCTCTTTTGTTATTTCAGGCATCTTACAGTAAATGACTTTATGAAGACAGTTACCTCAATGTGCCAAGAGGCAGGTAGAATTATGCCACCGATAACATGCAAGTCAGACACCACCCTTGGAGATGTTATCCACAGCTTGGCTTCCAAATCTGTTCACAGGATTTATGTTGTAGCTGAGGAAGATGAAGTTATTGGCGTTATTACACTCAGAGATGTTATTTCTTGCTTCATCTATGAACCTCCAAACTACTATGATGAGTACTTAGGTTATTCTGCTGAGGTGTTGCTTGACCGGTGAAAAATGTCTGTTCTTGAGATGAATAAATGCACCCAATCGCGTTTTTCACAGAGCGAGTGAGCTGCAAAAATTGCTCCTTGATTTAGACTTGAGAAACATATTTTCCTTGTTAGAACTTAGAAGTATATCAGAATGTTCTGTCATTCTTGTGACCTTGTAACTTGAAACTGTCTGAAATGGGCATAACAGTGTGCAACAATGTTAACCATCCAAATTTTCTGTAAGCAAAATCAATGTTATACTTGTTTCACCTGAAACTGTTTTCCAGCAGAGAAACTCCCTTCAGTCTTTCAAAAACTTGTGCCGATAATAGCCGTTTTTCTGCCGTTACCTGCATGATGCCGGTAATTGTGTGGCATTCTGACTTCTGGTCAGATAATATGTGGATCTTTTCAAGTCACTTGTACACTATAGCCCGGAAATTTCTCCAGTCCCTTCACACCAATCATATTCCTGATTCTCTCAACATCCTCCCACCTTCCCGTTGCTGCATATATATTAGATAAAACCACGAATGTAGCTCGATTTCCAGGTTCCAACTCAGAAAGTTCCTTCGCCATATCTTCACCAAGCTTGGGATCCAAATGGTGCCCAGCAGCACCAAGCAATGAAGAAAACACAGAACTAGAAATCTCAGGGATTTCACGCAACAATTCTTGAGCTTTCTGAAGGTGACCAGATCGACCCAATAGGTCAACCATGCAAGCAAAATGCTGTGAAGTTGGCATCAGGCCATATTTTACGGTCATCATCTCAAATACTCGTAATCCTTTGTCAAGCTGACCTGCATGACTACACACAGTCAGTAGGTTAGCAAATGTGCTGCTATTAGGCACAACATTATCTTTCTGCATTAGATAGAAAACTTCAAATGCAGAATCTTCCTCGCCATTTCTTCCATATCCTGAAATCATCGCATTCCAGAATGTTGGGTCGCGAGGTTTGATTTTGTACAGGTCAAATATTCTGCGTGCCCAAGATGATTGCCCACACTTCATGTACATGTCGATGAGGGCAGTAGTGAAGAACTCATCGTTACTGATTTCAGTTCTTATGGCCGCTGCATGAATCTGCTTTCCCAACTGCAGGGATGAGATCGTAGAACATGCATCCAAAAGGCTGGTAAGTGACTTCAAACTCGGAGCAATTCCTTTTGATACCATCTCGGTAAAGAACTGCACTGATTTGTCATATTGTCCTTGTTTTGAAAACCCACTGATCATTGTATTCCAAGTTGCAGAATCTGGTACCAATCCTTCAGATTCCAGTTCAGAGAACAATTTTAGGGCAGTATCACAATCGCCAGTCAAGAACATTCCAGAAATAATTGAATTCCATGTAATTAGATTCCTGTTACCCTTCATCTCTCTAAATACAAGATAACAAGAGTGTGA ATGGATAAATCACAGGACAAAACAATGGATACTGCGACAACAGTTGGCTATGATGCTTACTTTGAGACAGTTCAAAGTAGAAAAAAGTTGCCCATTTCGTTACAAGAGACATTGACATCTGCATTTGCAAGCATACCTGTTTCGTCCTTTCCAAAAGTACCTGGTGGCAAAGGTGGTTATCTTACTGGACATGGGTTTGTGTCCAAGTTAAGCTTTTTCATTGAGTTCTTTTACGATGATGGAAATCGCATGTATTTTTGTTTTGCAGTGATAGAGATTTCAGCAGAAACATCAGTATCTGATACTGTGAAGGTTCTCTCGGAATGCAACATACTCTCAGCACCGGTAACAGATATGGAGAAAGCCAACAGCAATGATTGGAAGGAGAGGTATATCGGGATAATAGACTATTCGGCGATTGTATTGTGGGTGTTACAAGGTGCTGAGCTTGCTGCTGTAGCTTTATCTGCAACCTCTGCTACAGCTGCTGGAGTTGGAGCAGGTGCAATAGGGACTTTAGGAGCAGTGGCACTTGGTGCCACTGGCCCAGTTGCGGTTGCTGGGTTAGCTGCTGCAGCAGTTGGGGCAGCCGTGGCAGGTGGCTTAGCAGTGGACAAAGGGATGGGAAAGGATGCTCCAACTGCTGCTAGTGAGTTAGGTGATGATTTCTACAAAGTTATTCTGCAAGAAGAACCCTTCAAGTCAACCAAAGTCAGGGAAGTTGTGAAATCATTCAGATCGACGCCATTCCTTCCAGTTTCAACAGAGAGCAATATGTTGACGGTTTTATTGCTTCTATCAAAGTATAGGATGAGAAACGTACCAGTAATCGAACCAGGAAAGGCTTTCATGAAGAATTTCATCACTCAATCTGCTGTTGTGAGGGGCCTTGAGGGATGTCGTGGACTAGATTGGTTTGATTGCATTGCTGCACATCCCATTTCTGACTTGGGCCTTCCTTTTATGTCACGCGATCAGGTTGTGAGCATTGACAGCAGTGAGCTGATTCTGGAGGCATTTAAGCGGATGAAGGACCACCACATTGGTGGCCTTCCGGTTGTGGAGGGACCAAAGAGGAAGATTGTTGGTAATTTGAGCATAAGAGATATCAGATACTTGTTACTCCAGCCAAACCTTTTCTCCAACTATAGGCATCTTACAGTAAATGACTTTATGAAGACAGTTACCTCAATGTGCCAAGAGGCAGGTAGAATTATGCCACCGATAACATGCAAGTCAGACACCACCCTTGGAGATGTTATCCACAGCTTGGCTTCCAAATCTGTTCACAGGATTTATGTTGTAGCTGAGGAAGATGAAGTTATTGGCGTTATTACACTCAGAGATGTTATTTCTTGCTTCATCTATGAACCTCCAAACTACTATGATGAGTACTTAGGTTATTCTGCTGAGGTGTTGCTTGACCGGGATGAGATCGTAGAACATGCATCCAAAAGGCTGGTAAGTGACTTCAAACTCGGAGCAATTCCTTTTGATACCATCTCGGTAAAGAACTGCACTGATTTGTCATATTGTCCTTGTTTTGAAAACCCACTGATCATTGTATTCCAAGTTGCAGAATCTGGTACCAATCCTTCAGATTCCAGTTCAGAGAACAATTTTAGGGCAGTATCACAATCGCCAGTCAAGAACATTCCAGAAATAATTGAATTCCATATTCCTGTTACCCTTCATCTCTCTAAATACAAGATAACAAGAGTGTGA ATGGATAAATCACAGGACAAAACAATGGATACTGCGACAACAGTTGGCTATGATGCTTACTTTGAGACAGTTCAAAGTAGAAAAAAGTTGCCCATTTCGTTACAAGAGACATTGACATCTGCATTTGCAAGCATACCTGTTTCGTCCTTTCCAAAAGTACCTGGTGGCAAAGGTGGTTATCTTACTGGACATGGGTTTGTGTCCAAGTTAAGCTTTTTCATTGAGTTCTTTTACGATGATGGAAATCGCATGTATTTTTGTTTTGCAGTGATAGAGATTTCAGCAGAAACATCAGTATCTGATACTGTGAAGGTTCTCTCGGAATGCAACATACTCTCAGCACCGGTAACAGATATGGAGAAAGCCAACAGCAATGATTGGAAGGAGAGGTATATCGGGATAATAGACTATTCGGCGATTGTATTGTGGGTGTTACAAGGTGCTGAGCTTGCTGCTGTAGCTTTATCTGCAACCTCTGCTACAGCTGCTGGAGTTGGAGCAGGTGCAATAGGGACTTTAGGAGCAGTGGCACTTGGTGCCACTGGCCCAGTTGCGGTTGCTGGGTTAGCTGCTGCAGCAGTTGGGGCAGCCGTGGCAGGTGGCTTAGCAGTGGACAAAGGGATGGGAAAGGATGCTCCAACTGCTGCTAGTGAGTTAGGTGATGATTTCTACAAAGTTATTCTGCAAGAAGAACCCTTCAAGTCAACCAAAGTCAGGGAAGTTGTGAAATCATTCAGATCGACGCCATTCCTTCCAGTTTCAACAGAGAGCAATATGTTGACGGTTTTATTGCTTCTATCAAAGTATAGGATGAGAAACGTACCAGTAATCGAACCAGGAAAGGCTTTCATGAAGAATTTCATCACTCAATCTGCTGTTGTGAGGGGCCTTGAGGGATGTCGTGGACTAGATTGGTTTGATTGCATTGCTGCACATCCCATTTCTGACTTGGGCCTTCCTTTTATGTCACGCGATCAGGTTGTGAGCATTGACAGCAGTGAGCTGATTCTGGAGGCATTTAAGCGGATGAAGGACCACCACATTGGTGGCCTTCCGGTTGTGGAGGGACCAAAGAGGAAGATTGTTGGTAATTTGAGCATAAGAGATATCAGATACTTGTTACTCCAGCCAAACCTTTTCTCCAACTATAGGCATCTTACAGTAAATGACTTTATGAAGACAGTTACCTCAATGTGCCAAGAGGCAGGTAGAATTATGCCACCGATAACATGCAAGTCAGACACCACCCTTGGAGATGTTATCCACAGCTTGGCTTCCAAATCTGTTCACAGGATTTATGTTGTAGCTGAGGAAGATGAAGTTATTGGCGTTATTACACTCAGAGATGTTATTTCTTGCTTCATCTATGAACCTCCAAACTACTATGATGAGTACTTAGGTTATTCTGCTGAGGTGTTGCTTGACCGGGATGAGATCGTAGAACATGCATCCAAAAGGCTGGTAAGTGACTTCAAACTCGGAGCAATTCCTTTTGATACCATCTCGGTAAAGAACTGCACTGATTTGTCATATTGTCCTTGTTTTGAAAACCCACTGATCATTGTATTCCAAGTTGCAGAATCTGGTACCAATCCTTCAGATTCCAGTTCAGAGAACAATTTTAGGGCAGTATCACAATCGCCAGTCAAGAACATTCCAGAAATAATTGAATTCCATATTCCTGTTACCCTTCATCTCTCTAAATACAAGATAACAAGAGTGTGA MDKSQDKTMDTATTVGYDAYFETVQSRKKLPISLQETLTSAFASIPVSSFPKVPGGKGGYLTGHGFVSKLSFFIEFFYDDGNRMYFCFAVIEISAETSVSDTVKVLSECNILSAPVTDMEKANSNDWKERYIGIIDYSAIVLWVLQGAELAAVALSATSATAAGVGAGAIGTLGAVALGATGPVAVAGLAAAAVGAAVAGGLAVDKGMGKDAPTAASELGDDFYKVILQEEPFKSTKVREVVKSFRSTPFLPVSTESNMLTVLLLLSKYRMRNVPVIEPGKAFMKNFITQSAVVRGLEGCRGLDWFDCIAAHPISDLGLPFMSRDQVVSIDSSELILEAFKRMKDHHIGGLPVVEGPKRKIVGNLSIRDIRYLLLQPNLFSNYRHLTVNDFMKTVTSMCQEAGRIMPPITCKSDTTLGDVIHSLASKSVHRIYVVAEEDEVIGVITLRDVISCFIYEPPNYYDEYLGYSAEVLLDRDEIVEHASKRLVSDFKLGAIPFDTISVKNCTDLSYCPCFENPLIIVFQVAESGTNPSDSSSENNFRAVSQSPVKNIPEIIEFHIPVTLHLSKYKITRV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo25771.1 vs. NCBI nr
Match: gi|902239267|gb|KNA25535.1| (hypothetical protein SOVF_003620 [Spinacia oleracea]) HSP 1 Score: 811.6 bits (2095), Expect = 8.700e-232 Identity = 436/470 (92.77%), Postives = 436/470 (92.77%), Query Frame = 1
BLAST of Spo25771.1 vs. NCBI nr
Match: gi|731344127|ref|XP_010683244.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 707.6 bits (1825), Expect = 1.800e-200 Identity = 373/477 (78.20%), Postives = 415/477 (87.00%), Query Frame = 1
BLAST of Spo25771.1 vs. NCBI nr
Match: gi|703098329|ref|XP_010096350.1| (SNF1-related protein kinase regulatory subunit gamma-1-like protein [Morus notabilis]) HSP 1 Score: 617.8 bits (1592), Expect = 1.800e-173 Identity = 323/460 (70.22%), Postives = 378/460 (82.17%), Query Frame = 1
BLAST of Spo25771.1 vs. NCBI nr
Match: gi|645229875|ref|XP_008221665.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Prunus mume]) HSP 1 Score: 601.7 bits (1550), Expect = 1.400e-168 Identity = 315/475 (66.32%), Postives = 385/475 (81.05%), Query Frame = 1
BLAST of Spo25771.1 vs. NCBI nr
Match: gi|596246932|ref|XP_007224598.1| (hypothetical protein PRUPE_ppa027089mg [Prunus persica]) HSP 1 Score: 601.3 bits (1549), Expect = 1.800e-168 Identity = 316/475 (66.53%), Postives = 384/475 (80.84%), Query Frame = 1
BLAST of Spo25771.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1B3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_003620 PE=4 SV=1) HSP 1 Score: 811.6 bits (2095), Expect = 6.100e-232 Identity = 436/470 (92.77%), Postives = 436/470 (92.77%), Query Frame = 1
BLAST of Spo25771.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0Y6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154500 PE=4 SV=1) HSP 1 Score: 707.6 bits (1825), Expect = 1.200e-200 Identity = 373/477 (78.20%), Postives = 415/477 (87.00%), Query Frame = 1
BLAST of Spo25771.1 vs. UniProtKB/TrEMBL
Match: W9R1E4_9ROSA (SNF1-related protein kinase regulatory subunit gamma-1-like protein OS=Morus notabilis GN=L484_021098 PE=4 SV=1) HSP 1 Score: 617.8 bits (1592), Expect = 1.300e-173 Identity = 323/460 (70.22%), Postives = 378/460 (82.17%), Query Frame = 1
BLAST of Spo25771.1 vs. UniProtKB/TrEMBL
Match: M5XI76_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa027089mg PE=4 SV=1) HSP 1 Score: 601.3 bits (1549), Expect = 1.200e-168 Identity = 316/475 (66.53%), Postives = 384/475 (80.84%), Query Frame = 1
BLAST of Spo25771.1 vs. UniProtKB/TrEMBL
Match: A0A061EAS3_THECC (Cystathionine beta-synthase protein isoform 1 OS=Theobroma cacao GN=TCM_011791 PE=4 SV=1) HSP 1 Score: 600.1 bits (1546), Expect = 2.800e-168 Identity = 313/459 (68.19%), Postives = 373/459 (81.26%), Query Frame = 1
BLAST of Spo25771.1 vs. ExPASy Swiss-Prot
Match: KINGL_ARATH (SNF1-related protein kinase regulatory subunit gamma-1-like OS=Arabidopsis thaliana GN=CBSCBS2 PE=1 SV=1) HSP 1 Score: 563.5 bits (1451), Expect = 2.600e-159 Identity = 302/473 (63.85%), Postives = 372/473 (78.65%), Query Frame = 1
BLAST of Spo25771.1 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma-1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2) HSP 1 Score: 209.9 bits (533), Expect = 7.300e-53 Identity = 105/275 (38.18%), Postives = 171/275 (62.18%), Query Frame = 1
BLAST of Spo25771.1 vs. ExPASy Swiss-Prot
Match: AAKG3_PIG (5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa GN=PRKAG3 PE=1 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 1.400e-11 Identity = 60/234 (25.64%), Postives = 107/234 (45.73%), Query Frame = 1
BLAST of Spo25771.1 vs. ExPASy Swiss-Prot
Match: AAKG3_MOUSE (5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus GN=Prkag3 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.400e-11 Identity = 57/232 (24.57%), Postives = 107/232 (46.12%), Query Frame = 1
BLAST of Spo25771.1 vs. ExPASy Swiss-Prot
Match: AAKG3_HUMAN (5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens GN=PRKAG3 PE=1 SV=3) HSP 1 Score: 72.0 bits (175), Expect = 2.400e-11 Identity = 58/232 (25.00%), Postives = 108/232 (46.55%), Query Frame = 1
BLAST of Spo25771.1 vs. TAIR (Arabidopsis)
Match: AT1G69800.2 (Cystathionine beta-synthase (CBS) protein) HSP 1 Score: 563.5 bits (1451), Expect = 1.500e-160 Identity = 302/473 (63.85%), Postives = 372/473 (78.65%), Query Frame = 1
BLAST of Spo25771.1 vs. TAIR (Arabidopsis)
Match: AT3G48530.1 (SNF1-related protein kinase regulatory subunit gamma 1) HSP 1 Score: 209.9 bits (533), Expect = 4.100e-54 Identity = 105/275 (38.18%), Postives = 171/275 (62.18%), Query Frame = 1
BLAST of Spo25771.1 vs. TAIR (Arabidopsis)
Match: AT1G15330.1 (Cystathionine beta-synthase (CBS) protein) HSP 1 Score: 58.9 bits (141), Expect = 1.200e-8 Identity = 48/199 (24.12%), Postives = 90/199 (45.23%), Query Frame = 1
BLAST of Spo25771.1 vs. TAIR (Arabidopsis)
Match: AT1G80090.1 (Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 55.8 bits (133), Expect = 9.900e-8 Identity = 40/163 (24.54%), Postives = 78/163 (47.85%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25771.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25771.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25771.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25771.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 4
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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