Spo25800.1 (mRNA) | SpinachBase

Overview


Name	Spo25800.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	AT1G65230-like protein
Location	chr4 : 11557765 .. 11561979 (+)
Sequence length	1300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACAAAAATTAGTGGTGACGTGGCAGATAGCCAAAGCCTTTCCACCACTAATAAGAATCCAAAACAACACAACTAACCCCACCTTATCCAAAAAATAAAGAGCCAAAAATAATTAATCACAAAATCACATACCCTAAAAAAAATAAAGTTAAACAAACAAAAAACACACTTTGTGCATTTTTTGCAGAATGGAGAGTAGAAATGAGCACCTTAACAACAACAACCACCACCACCATCAATACAACCACAACCAAAGTCTCGACACCCGTACCGCCTTTTCGTGCCGCCCTCGGCCACTACCGATGTCGGAAAAGTTTTCTCTCGACCAATCGTATCCATATCAATCGTCGCGCTATTCCTCTACCACGTGGTAAGTTGGTAGCAACACGTACAGTTTGACATTGCTAGCTAGTTTATTGGGATTTCTTTAAGAGTTATAACAATCAAATTAAGGAATAATTCAATGAAACGTTGTATGTGTTAGATAACCCATTTTTCGGTTGTTAGCTACTAAATGATTGAATCAAATTATTTAAGATAACTCAAATAATTCAAAATGACTCTTCAAATGAACGTGTTTACTACGTAGTATCAATTTCCAGATTTTGATTTTGAAAGCTAATTCATATAATTTAAGTTGAATTATGAACTTCAAAAATAGTTGTACCTATATATATCAACACGTACAGTTTGACACTACTAGCTTGTTTAGATGGTAAAAATTTATTGGGATTTCTTTAAAAGTTAGGTTATGATATCCTCTTCACCTTATTCTTGTTGCTTATTGGATCAGATAAAAGCAGACTAGAAAAACAATAAAACACCCACATAAAACATTCAGAAGAAACTAGAAAAATCAGACCATGTCAGGTGAAAAGAACAGAGACTTAATTTAATTTGGCAGTTATAAATGATCAAAGTAAACATATCAATAATAATATATGTAAATGATCATGTTTGTTTTGTTTTTTTTTAATTTGGCAGTTATAAATGATCAAAGTAAGACAGAGTTAGGTTATGTTCTTTTTACCTTATTCTTGTTGCTTATTAGATCAGATCATAACATGCTAGAAAAAAAAACAATAAAACACCCACATAAAACATTCAGATCATATCAGATTAGAAACTAGAAAAATCACACCACGTCAGGTGAAAAGAACAGAGACTTAATTTAACTTGGAAGTTATAAATTATCAAAGTCAATGATCAAAGTAAACATATGAATAATAATATAATGTAAATGATCATGTTTTTTTTAATTTAATTTGGCAGTTATAAATGATCAAAGTAAGACAGAGGTTGAAAAGGCAGAGGCAGATAAAATAGTGGATGGGATGGAATTTGAGGAGCTATGCAATGAGTTTGAGTGCAAAAGTAGTCCATCTGTTGAATCCACTGCTAGACAACTTGTACGTGATATCTTAGAGCTTAGGGAAGGTAACCGTGCACTTGGTACTTTTGCCGTTTCTGTCAAATACAAGGTACAAATTATTTACTTTTACTTAGTTTCGGAATTGATTTTGGTACACTCATTGTGAAAGCATAGTTTTGTGTAAGACGCGTCTTATTTTTCTAATTAACATGAAGGAAGTATGTAATGTTTGGTTTATTGAAGATCTTACAAGATCTACAAAAAATCAAAATATGATTTGATCTACTTCGTATTATCTTGTTGATCGATTCTCTATGTGTTATAAGAATCAAATTAGAGAATAATTCAACTTAATTGAACTTATAGCTTAGTCCTGTAACTTAATTGAGAAGAACGCATCCTGAACCTATGGGTTCATTTTATGACATGTTTGGTGAGAGCTACTTAAATCGAGATTTGAGATTCCTTTACCTTTTACTCAGTTTCGGAATTGACTTTGGTACACTCGTTGTGAAAGCACAGTTTTCTGCAGCACGCATCTTTTTTCCTAATTAACATGAAGAGGAAGTACGTAATGTTTGGTTTATTGAAGATTTTACAAAATCCACGAAAAAATCAAAATATAATTTGATCTATTACCTTGTTGATCGATTCTTTATGTGTTATAAGATTCAAATTAGAGAATAATTCAACTTAGTTGAACTTATTAGTCATTGAACTTAATTGAGAAGAACGCATCTTGAACCTGTCAATTCAGTTTGTGACATATTTGGTGAGATCTACTTAAATCAAGATTTGAGATTCTTTTGCCATTAGCGGCTCTCTAATTTTCTATGCATAAAAAAACCCTCCACCCAACTTGCGTATATGCACACCCTTATCTGTGCACAAGGGTATCACCAAATAGTTTTTAGGCACAAGCTAAATGAATAAGATCGATGTCAGTTAGCTTAGCTGGTAAAGTTTTAGGTGGAGTGTATACATAATCAAGATCCGACACCCATTTATCAGTTTAAGAATCGTAAATCCGAAACACTAATTAGGCAAGCTAATCATCAAGTGATAATGCACTAATGTTACAATTAAATGTACTCTTGGTGCAAATTGCAGGATCCAATTAGAAGCTTCACAGGACGAGAAAAGTACAAAAGACCACTTTGGATAACTGATGCACTTGATAATCCTAGAGTGGTACGTAAAATAATTTTGTGTTCACGTAAATGACGTTGTATGGATGATTATTAATGATATTGTTTTTTCCCCGTAAAAAAAATTGTTGTTTGATTGATCATATAATATAGACAGTGCAAGAGATGACGATGTTGTCAACAAGTGTGCTTATCATCAAATGGACACTTAAAGGGAAGCCAAAGTCAATATTAGCTACCATAAGTGGAGATTTGATTGTTAAGGTGAATTCTAAGTTCACCTTAAACCAGATTAGTGGCCAAGTAATCGAGCACGAGGAGTCGTGGGATCTATCTGCATCATCACCGGTAGCTCAAGCATACTTCGGGGCGTCACGCCGCCTCTTCGCAGCGAAAGAAACCGGCAAAGATGTGGTGGATTCTGTGAAGAAACTTGGTGGCAAGATTTCTACCCCAAAGGAAAACATTGAGATATATCCTGACCCTTCCGGCGATCCAATGAAGGTAAAAAATCTTGTTCTTTTTGGTTGAATTTCAGTTTTTTTTTCAGTTCAGTTTAGCAAACTTCGGCTCAAAAGAACAAGGTCTTACTGAAATTGAATCCAAACTAATCATCACCGGTGAAAAACCATTTTTTTGTGGGTCAATATTAATTTCAATCGATTAGTATAAGTTGAACAGAACACGACTTTAGAGGTTTTACTTGTTATTTCTTTACTGTTATCAAGAATTAGACATTATCGGTCATAAAGTGACAACCAAAGGTAACGAAATGCACTAATTCTTAAATAGACCTGGTTCACACAAATTTATTGTGGATCATGTCTAAAAAAAAGTTAGTTAACAACCGCATTCTAATTTATTTTGACGTGTTTATTAAAATTATTATGAAAAAAGTATCAAATTGGTATCATTAGTACATGTTGTGCTTGAATAATGTGATTTTAAGTCACGATTCTCTTTTAATATAATTCAACTAATGGTACAACAATGTTACACGATTTTCTCTAGGTTTGTCGAAACTAGATTAGAAACTTGACGTGTTTATTAGAATTATTATGAAAAAAGTATCAAATTGTTATCATTAGTGCATGTTGTCCTTGAATAATGTGATTTTAAGTCACGATTCCCTTTCAATATAATGCAACTAATGGTACAACAATGTTACACGATTTTCTCTAGGTTTGTCGAAACTAAATTAGAAACTTGACGTGTTTATTAGAATTATTATGAAAAAAGTATCAAACTGGTATCATTAGTTCATGTTGTGCTTGAATAATGTGATATATAAGTCACAATTCTCTTTTAATATAACGCAACTAATGGTACAACAATGTTACACGATTTTCTCTAGGTTTTTCGAAACTAGATTAGAAACTTAACGCGTTTATTTGTTCGTGTTACAGTTCTTTCAAAGAGACGACTCCGAACAAAGGGACTTGTACCAGATTGCGTTATTCCTCGCACTTGTTTACTTCGTTGTACAATACTTGAGAACGACTTTGTAAAACATCGAATGCTCAAAACTGATCTTATGTATGTATTTTCTTTTTTCTTTCCTCCTAGTAAAGAAAATGTAGTATATTTAAAATAAATATCACAAATTCTTATTCACGAGTGTCGTACAATAAATATTATACACCGGAATAAAAGTTTCTCAAAATGCTTAAAAGTTAGCTTTATATACGTAAAAT

mRNA sequence

CCACAAAAATTAGTGGTGACGTGGCAGATAGCCAAAGCCTTTCCACCACTAATAAGAATCCAAAACAACACAACTAACCCCACCTTATCCAAAAAATAAAGAGCCAAAAATAATTAATCACAAAATCACATACCCTAAAAAAAATAAAGTTAAACAAACAAAAAACACACTTTGTGCATTTTTTGCAGAATGGAGAGTAGAAATGAGCACCTTAACAACAACAACCACCACCACCATCAATACAACCACAACCAAAGTCTCGACACCCGTACCGCCTTTTCGTGCCGCCCTCGGCCACTACCGATGTCGGAAAAGTTTTCTCTCGACCAATCGTATCCATATCAATCGTCGCGCTATTCCTCTACCACGTGTTATAAATGATCAAAGTAAGACAGAGGTTGAAAAGGCAGAGGCAGATAAAATAGTGGATGGGATGGAATTTGAGGAGCTATGCAATGAGTTTGAGTGCAAAAGTAGTCCATCTGTTGAATCCACTGCTAGACAACTTGTACGTGATATCTTAGAGCTTAGGGAAGGTAACCGTGCACTTGGTACTTTTGCCGTTTCTGTCAAATACAAGGATCCAATTAGAAGCTTCACAGGACGAGAAAAGTACAAAAGACCACTTTGGATAACTGATGCACTTGATAATCCTAGAGTGACAGTGCAAGAGATGACGATGTTGTCAACAAGTGTGCTTATCATCAAATGGACACTTAAAGGGAAGCCAAAGTCAATATTAGCTACCATAAGTGGAGATTTGATTGTTAAGGTGAATTCTAAGTTCACCTTAAACCAGATTAGTGGCCAAGTAATCGAGCACGAGGAGTCGTGGGATCTATCTGCATCATCACCGGTAGCTCAAGCATACTTCGGGGCGTCACGCCGCCTCTTCGCAGCGAAAGAAACCGGCAAAGATGTGGTGGATTCTGTGAAGAAACTTGGTGGCAAGATTTCTACCCCAAAGGAAAACATTGAGATATATCCTGACCCTTCCGGCGATCCAATGAAGTTCTTTCAAAGAGACGACTCCGAACAAAGGGACTTGTACCAGATTGCGTTATTCCTCGCACTTGTTTACTTCGTTGTACAATACTTGAGAACGACTTTGTAAAACATCGAATGCTCAAAACTGATCTTATGTATGTATTTTCTTTTTTCTTTCCTCCTAGTAAAGAAAATGTAGTATATTTAAAATAAATATCACAAATTCTTATTCACGAGTGTCGTACAATAAATATTATACACCGGAATAAAAGTTTCTCAAAATGCTTAAAAGTTAGCTTTATATACGTAAAAT

Coding sequence (CDS)

ATGAGCACCTTAACAACAACAACCACCACCACCATCAATACAACCACAACCAAAGTCTCGACACCCGTACCGCCTTTTCGTGCCGCCCTCGGCCACTACCGATGTCGGAAAAGTTTTCTCTCGACCAATCGTATCCATATCAATCGTCGCGCTATTCCTCTACCACGTGTTATAAATGATCAAAGTAAGACAGAGGTTGAAAAGGCAGAGGCAGATAAAATAGTGGATGGGATGGAATTTGAGGAGCTATGCAATGAGTTTGAGTGCAAAAGTAGTCCATCTGTTGAATCCACTGCTAGACAACTTGTACGTGATATCTTAGAGCTTAGGGAAGGTAACCGTGCACTTGGTACTTTTGCCGTTTCTGTCAAATACAAGGATCCAATTAGAAGCTTCACAGGACGAGAAAAGTACAAAAGACCACTTTGGATAACTGATGCACTTGATAATCCTAGAGTGACAGTGCAAGAGATGACGATGTTGTCAACAAGTGTGCTTATCATCAAATGGACACTTAAAGGGAAGCCAAAGTCAATATTAGCTACCATAAGTGGAGATTTGATTGTTAAGGTGAATTCTAAGTTCACCTTAAACCAGATTAGTGGCCAAGTAATCGAGCACGAGGAGTCGTGGGATCTATCTGCATCATCACCGGTAGCTCAAGCATACTTCGGGGCGTCACGCCGCCTCTTCGCAGCGAAAGAAACCGGCAAAGATGTGGTGGATTCTGTGAAGAAACTTGGTGGCAAGATTTCTACCCCAAAGGAAAACATTGAGATATATCCTGACCCTTCCGGCGATCCAATGAAGTTCTTTCAAAGAGACGACTCCGAACAAAGGGACTTGTACCAGATTGCGTTATTCCTCGCACTTGTTTACTTCGTTGTACAATACTTGAGAACGACTTTGTAA

Protein sequence

MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVINDQSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYFVVQYLRTTL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25800	Spo25800	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25800.1	Spo25800.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25800.1.exon.1	Spo25800.1.exon.1	exon
Spo25800.1.exon.2	Spo25800.1.exon.2	exon
Spo25800.1.exon.3	Spo25800.1.exon.3	exon
Spo25800.1.exon.4	Spo25800.1.exon.4	exon
Spo25800.1.exon.5	Spo25800.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25800.1.utr5p.1	Spo25800.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25800.1.CDS.1	Spo25800.1.CDS.1	CDS
Spo25800.1.CDS.2	Spo25800.1.CDS.2	CDS
Spo25800.1.CDS.3	Spo25800.1.CDS.3	CDS
Spo25800.1.CDS.4	Spo25800.1.CDS.4	CDS
Spo25800.1.CDS.5	Spo25800.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25800.1.utr3p.1	Spo25800.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo25800.1 vs. NCBI nr
Match: gi|902179998|gb|KNA09452.1| (hypothetical protein SOVF_153540 [Spinacia oleracea])

HSP 1 Score: 581.3 bits (1497), Expect = 1.000e-162
Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 1


		  
Query: 1   MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND 60
           MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND
Sbjct: 1   MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND 60

Query: 61  QSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFA 120
           QSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFA
Sbjct: 61  QSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFA 120

Query: 121 VSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSIL 180
           VSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSIL
Sbjct: 121 VSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSIL 180

Query: 181 ATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDV 240
           ATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDV
Sbjct: 181 ATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDV 240

Query: 241 VDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYFVVQYLR 300
           VDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLAL+YFVVQYLR
Sbjct: 241 VDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALIYFVVQYLR 300

Query: 301 TTL 304
           TTL
Sbjct: 301 TTL 303

[Close]

BLAST of Spo25800.1 vs. NCBI nr
Match: gi|731326208|ref|XP_010673903.1| (PREDICTED: uncharacterized protein LOC104890207 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 429.9 bits (1104), Expect = 3.800e-117
Identity = 227/309 (73.46%), Postives = 253/309 (81.88%), Query Frame = 1


		  
Query: 1   MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND 60
           MS  TTTTTT  N+T   +      F A  G +RC+K+FLS   I    R  PL  V ND
Sbjct: 1   MSNFTTTTTT--NSTKATILAANTLFLAIPGRFRCQKNFLSAQHIKTTHRQFPLLHVTND 60

Query: 61  QSKTEVE------KAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNR 120
            +KT V       ++E DK++DGM+F ELCNEFEC SSP VESTARQLVRDIL+LREGNR
Sbjct: 61  ANKTGVSLDRTIGRSEVDKLMDGMDFGELCNEFECISSPLVESTARQLVRDILQLREGNR 120

Query: 121 ALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKG 180
           ALGTFA SVKYKDP+RSFTGREKYKRPLW+TDAL+N +V VQEM MLSTSVL IKWT+KG
Sbjct: 121 ALGTFATSVKYKDPVRSFTGREKYKRPLWVTDALENTKVAVQEMVMLSTSVLNIKWTIKG 180

Query: 181 KPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAK 240
           KPKSILA+I GDL +KVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYF ASRRLFA K
Sbjct: 181 KPKSILASIGGDLFIKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFWASRRLFATK 240

Query: 241 ETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYF 300
           E  KDVVDS+K LG KISTPKENIE+YPDPSGDP KFFQRDD++QRDLYQIALFLA+VYF
Sbjct: 241 EASKDVVDSIKDLGNKISTPKENIEVYPDPSGDPTKFFQRDDADQRDLYQIALFLAIVYF 300

Query: 301 VVQYLRTTL 304
           VVQ+L+TTL
Sbjct: 301 VVQFLKTTL 307

[Close]

BLAST of Spo25800.1 vs. NCBI nr
Match: gi|297735250|emb|CBI17612.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 393.7 bits (1010), Expect = 3.000e-106
Identity = 205/272 (75.37%), Postives = 228/272 (83.82%), Query Frame = 1


		  
Query: 38  SFLSTNRIHINRRAIPLPRVINDQSKT------EVEKAEADKIVDGMEFEELCNEFECKS 97
           SFL  +  H      PL +V ND ++       E E++EADKIVDGM+F ELCNEFEC S
Sbjct: 76  SFLLHHHHHHLHHPFPL-KVTNDPNRRTAEVSIESERSEADKIVDGMDFGELCNEFECIS 135

Query: 98  SPSVESTARQLVRDILELREGNRALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNP 157
           SP VESTARQL RDILELREGNRALGTFAVSVKYKDP+RSFTGREKYKR LW+TDALD+P
Sbjct: 136 SPLVESTARQLARDILELREGNRALGTFAVSVKYKDPVRSFTGREKYKRRLWVTDALDDP 195

Query: 158 RVTVQEMTMLSTSVLIIKWTLKGKPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESW 217
            VTVQEM MLSTSVL IKWT+KGKPKS+LA+I GDLI++VNS+FTLNQISGQVIEHEE W
Sbjct: 196 SVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIGGDLIIRVNSQFTLNQISGQVIEHEEFW 255

Query: 218 DLSASSPVAQAYFGASRRLFAAKETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKF 277
           DLSASS +AQAYF ASRRLFAA E GKD  DSVK  G ++ST KEN+EIYPDPSGDP KF
Sbjct: 256 DLSASSAIAQAYFWASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPSGDPTKF 315

Query: 278 FQRDDSEQRDLYQIALFLALVYFVVQYLRTTL 304
           FQRDDS QRD YQIALFLA++YFVVQ+LRTTL
Sbjct: 316 FQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 346

[Close]

BLAST of Spo25800.1 vs. NCBI nr
Match: gi|225430926|ref|XP_002277168.1| (PREDICTED: uncharacterized protein LOC100263239 [Vitis vinifera])

HSP 1 Score: 393.7 bits (1010), Expect = 3.000e-106
Identity = 205/272 (75.37%), Postives = 228/272 (83.82%), Query Frame = 1


		  
Query: 38  SFLSTNRIHINRRAIPLPRVINDQSKT------EVEKAEADKIVDGMEFEELCNEFECKS 97
           SFL  +  H      PL +V ND ++       E E++EADKIVDGM+F ELCNEFEC S
Sbjct: 31  SFLLHHHHHHLHHPFPL-KVTNDPNRRTAEVSIESERSEADKIVDGMDFGELCNEFECIS 90

Query: 98  SPSVESTARQLVRDILELREGNRALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNP 157
           SP VESTARQL RDILELREGNRALGTFAVSVKYKDP+RSFTGREKYKR LW+TDALD+P
Sbjct: 91  SPLVESTARQLARDILELREGNRALGTFAVSVKYKDPVRSFTGREKYKRRLWVTDALDDP 150

Query: 158 RVTVQEMTMLSTSVLIIKWTLKGKPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESW 217
            VTVQEM MLSTSVL IKWT+KGKPKS+LA+I GDLI++VNS+FTLNQISGQVIEHEE W
Sbjct: 151 SVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIGGDLIIRVNSQFTLNQISGQVIEHEEFW 210

Query: 218 DLSASSPVAQAYFGASRRLFAAKETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKF 277
           DLSASS +AQAYF ASRRLFAA E GKD  DSVK  G ++ST KEN+EIYPDPSGDP KF
Sbjct: 211 DLSASSAIAQAYFWASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPSGDPTKF 270

Query: 278 FQRDDSEQRDLYQIALFLALVYFVVQYLRTTL 304
           FQRDDS QRD YQIALFLA++YFVVQ+LRTTL
Sbjct: 271 FQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 301

[Close]

BLAST of Spo25800.1 vs. NCBI nr
Match: gi|147819671|emb|CAN76393.1| (hypothetical protein VITISV_020863 [Vitis vinifera])

HSP 1 Score: 387.9 bits (995), Expect = 1.600e-104
Identity = 195/239 (81.59%), Postives = 214/239 (89.54%), Query Frame = 1


		  
Query: 65  EVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFAVSVK 124
           E E++EADKIVDGM+F ELCNEFEC SSP VESTARQL RDILELREGNRALGTFAVSVK
Sbjct: 60  ESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARDILELREGNRALGTFAVSVK 119

Query: 125 YKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSILATIS 184
           YKDP+RSFTGREKYKR LW+TDALD+P VTVQEM MLSTSVL IKWT+KGKPKS+LA+I 
Sbjct: 120 YKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIG 179

Query: 185 GDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDVVDSV 244
           GDLI++VNS+FTLNQISGQVIEHEE WDLSASS +AQAYF ASRRLFAA E GKD  DSV
Sbjct: 180 GDLIIRVNSQFTLNQISGQVIEHEEFWDLSASSAIAQAYFWASRRLFAATEAGKDFADSV 239

Query: 245 KKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYFVVQYLRTTL 304
           K  G ++ST  EN+EIYPDPSGDP KFFQRDDS QRD YQIALFLA++YFVVQ+LRTTL
Sbjct: 240 KNWGSRLSTEXENLEIYPDPSGDPTKFFQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 298

[Close]

BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQB6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_153540 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 7.100e-163
Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 1


		  
Query: 1   MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND 60
           MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND
Sbjct: 1   MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND 60

Query: 61  QSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFA 120
           QSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFA
Sbjct: 61  QSKTEVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFA 120

Query: 121 VSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSIL 180
           VSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSIL
Sbjct: 121 VSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSIL 180

Query: 181 ATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDV 240
           ATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDV
Sbjct: 181 ATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDV 240

Query: 241 VDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYFVVQYLR 300
           VDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLAL+YFVVQYLR
Sbjct: 241 VDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALIYFVVQYLR 300

Query: 301 TTL 304
           TTL
Sbjct: 301 TTL 303

[Close]

BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRY3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074990 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.600e-117
Identity = 227/309 (73.46%), Postives = 253/309 (81.88%), Query Frame = 1


		  
Query: 1   MSTLTTTTTTTINTTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVIND 60
           MS  TTTTTT  N+T   +      F A  G +RC+K+FLS   I    R  PL  V ND
Sbjct: 1   MSNFTTTTTT--NSTKATILAANTLFLAIPGRFRCQKNFLSAQHIKTTHRQFPLLHVTND 60

Query: 61  QSKTEVE------KAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNR 120
            +KT V       ++E DK++DGM+F ELCNEFEC SSP VESTARQLVRDIL+LREGNR
Sbjct: 61  ANKTGVSLDRTIGRSEVDKLMDGMDFGELCNEFECISSPLVESTARQLVRDILQLREGNR 120

Query: 121 ALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKG 180
           ALGTFA SVKYKDP+RSFTGREKYKRPLW+TDAL+N +V VQEM MLSTSVL IKWT+KG
Sbjct: 121 ALGTFATSVKYKDPVRSFTGREKYKRPLWVTDALENTKVAVQEMVMLSTSVLNIKWTIKG 180

Query: 181 KPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAK 240
           KPKSILA+I GDL +KVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYF ASRRLFA K
Sbjct: 181 KPKSILASIGGDLFIKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFWASRRLFATK 240

Query: 241 ETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYF 300
           E  KDVVDS+K LG KISTPKENIE+YPDPSGDP KFFQRDD++QRDLYQIALFLA+VYF
Sbjct: 241 EASKDVVDSIKDLGNKISTPKENIEVYPDPSGDPTKFFQRDDADQRDLYQIALFLAIVYF 300

Query: 301 VVQYLRTTL 304
           VVQ+L+TTL
Sbjct: 301 VVQFLKTTL 307

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BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
Match: F6GX17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00720 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.100e-106
Identity = 205/272 (75.37%), Postives = 228/272 (83.82%), Query Frame = 1


		  
Query: 38  SFLSTNRIHINRRAIPLPRVINDQSKT------EVEKAEADKIVDGMEFEELCNEFECKS 97
           SFL  +  H      PL +V ND ++       E E++EADKIVDGM+F ELCNEFEC S
Sbjct: 31  SFLLHHHHHHLHHPFPL-KVTNDPNRRTAEVSIESERSEADKIVDGMDFGELCNEFECIS 90

Query: 98  SPSVESTARQLVRDILELREGNRALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNP 157
           SP VESTARQL RDILELREGNRALGTFAVSVKYKDP+RSFTGREKYKR LW+TDALD+P
Sbjct: 91  SPLVESTARQLARDILELREGNRALGTFAVSVKYKDPVRSFTGREKYKRRLWVTDALDDP 150

Query: 158 RVTVQEMTMLSTSVLIIKWTLKGKPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESW 217
            VTVQEM MLSTSVL IKWT+KGKPKS+LA+I GDLI++VNS+FTLNQISGQVIEHEE W
Sbjct: 151 SVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIGGDLIIRVNSQFTLNQISGQVIEHEEFW 210

Query: 218 DLSASSPVAQAYFGASRRLFAAKETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKF 277
           DLSASS +AQAYF ASRRLFAA E GKD  DSVK  G ++ST KEN+EIYPDPSGDP KF
Sbjct: 211 DLSASSAIAQAYFWASRRLFAATEAGKDFADSVKNWGSRLSTEKENLEIYPDPSGDPTKF 270

Query: 278 FQRDDSEQRDLYQIALFLALVYFVVQYLRTTL 304
           FQRDDS QRD YQIALFLA++YFVVQ+LRTTL
Sbjct: 271 FQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 301

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BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
Match: A5B3D0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020863 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.100e-104
Identity = 195/239 (81.59%), Postives = 214/239 (89.54%), Query Frame = 1


		  
Query: 65  EVEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFAVSVK 124
           E E++EADKIVDGM+F ELCNEFEC SSP VESTARQL RDILELREGNRALGTFAVSVK
Sbjct: 60  ESERSEADKIVDGMDFGELCNEFECISSPLVESTARQLARDILELREGNRALGTFAVSVK 119

Query: 125 YKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSILATIS 184
           YKDP+RSFTGREKYKR LW+TDALD+P VTVQEM MLSTSVL IKWT+KGKPKS+LA+I 
Sbjct: 120 YKDPVRSFTGREKYKRRLWVTDALDDPSVTVQEMVMLSTSVLSIKWTIKGKPKSLLASIG 179

Query: 185 GDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDVVDSV 244
           GDLI++VNS+FTLNQISGQVIEHEE WDLSASS +AQAYF ASRRLFAA E GKD  DSV
Sbjct: 180 GDLIIRVNSQFTLNQISGQVIEHEEFWDLSASSAIAQAYFWASRRLFAATEAGKDFADSV 239

Query: 245 KKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYFVVQYLRTTL 304
           K  G ++ST  EN+EIYPDPSGDP KFFQRDDS QRD YQIALFLA++YFVVQ+LRTTL
Sbjct: 240 KNWGSRLSTEXENLEIYPDPSGDPTKFFQRDDSFQRDFYQIALFLAVLYFVVQFLRTTL 298

[Close]

BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
Match: B9RM63_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1077930 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 9.100e-102
Identity = 192/256 (75.00%), Postives = 217/256 (84.77%), Query Frame = 1


		  
Query: 54  LPRVINDQSKTE------VEKAEADKIVDGMEFEELCNEFECKSSPSVESTARQLVRDIL 113
           L RV ND ++TE      V ++EADKIVDGM+F ELCNEFEC SSP VE+TARQL RDIL
Sbjct: 57  LLRVTNDSNRTELSSDVAVGRSEADKIVDGMDFGELCNEFECISSPLVEATARQLARDIL 116

Query: 114 ELREGNRALGTFAVSVKYKDPIRSFTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLI 173
           ELREGNRALGTFAVSV+YKDP+RSFTGREKYKRPLW+T ALDNP V VQEM MLSTSVL 
Sbjct: 117 ELREGNRALGTFAVSVRYKDPVRSFTGREKYKRPLWVTGALDNPSVAVQEMVMLSTSVLS 176

Query: 174 IKWTLKGKPKSILATISGDLIVKVNSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGAS 233
           IKWT+KGKPKS LA+  G+LI+KVNS+FTLNQISGQVIEHEE WDLSASSP+AQA+F  S
Sbjct: 177 IKWTIKGKPKSFLASAGGELIIKVNSQFTLNQISGQVIEHEEVWDLSASSPIAQAFFWTS 236

Query: 234 RRLFAAKETGKDVVDSVKKLGGKISTPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIAL 293
           RRLFA  ETGKD+ D VK L  ++   +EN+EI+PDPSGDP KFFQRDD  QRD YQIAL
Sbjct: 237 RRLFATLETGKDLSDFVKNLTTRLPAERENLEIFPDPSGDPTKFFQRDDGFQRDAYQIAL 296

Query: 294 FLALVYFVVQYLRTTL 304
           FLA++YFVVQ+LRTTL
Sbjct: 297 FLAVIYFVVQFLRTTL 312

[Close]

BLAST of Spo25800.1 vs. TAIR (Arabidopsis)
Match: AT1G65230.1 (Uncharacterized conserved protein (DUF2358))

HSP 1 Score: 363.2 bits (931), Expect = 1.500e-100
Identity = 193/292 (66.10%), Postives = 231/292 (79.11%), Query Frame = 1


		  
Query: 14  TTTTKVSTPVPPFRAALGHYRCRKSFLSTNRIHINRRAIPLPRVINDQSKTEV--EKAEA 73
           TT++ +    PP  A L     R S+LS+   H       LP+V+ND ++TEV  +K+E 
Sbjct: 2   TTSSFLLPASPPSAAFLRRRFFRHSWLSSKIHH------RLPQVMNDSTRTEVSIDKSEV 61

Query: 74  DKIVDGMEFEELCNEFECKSSPSVESTARQLVRDILELREGNRALGTFAVSVKYKDPIRS 133
           DK+VD ++F ELCN+FEC SSP VESTARQLVRDILE+REGNRA   +AVSVKYKDP+RS
Sbjct: 62  DKLVDKIDFGELCNDFECTSSPQVESTARQLVRDILEIREGNRAFACYAVSVKYKDPVRS 121

Query: 134 FTGREKYKRPLWITDALDNPRVTVQEMTMLSTSVLIIKWTLKGKPKSILATISGDLIVKV 193
           FTGREKYKRP+WIT  L+NP VTVQEM MLSTSVL IKWT+KGKPKSILA +SGDLIVKV
Sbjct: 122 FTGREKYKRPMWITSGLENPTVTVQEMVMLSTSVLRIKWTVKGKPKSILAAVSGDLIVKV 181

Query: 194 NSKFTLNQISGQVIEHEESWDLSASSPVAQAYFGASRRLFAAKETGKDVVDSVKKLGGKI 253
            S+FTLNQISGQV EHEESWDLS+SSP+AQAYF  SRRLFAA E+ KDV D  K L   +
Sbjct: 182 KSEFTLNQISGQVFEHEESWDLSSSSPIAQAYFWTSRRLFAASESAKDVADVTKDLTANL 241

Query: 254 STPKENIEIYPDPSGDPMKFFQRDDSEQRDLYQIALFLALVYFVVQYLRTTL 304
           +T KE+ +IY DP+ DP KFFQRD+S +RD+YQIALFLA+VYFVVQ+L+ T+
Sbjct: 242 TTRKEDTDIYRDPT-DPNKFFQRDNSFERDVYQIALFLAIVYFVVQFLKNTI 286

The following BLAST results are available for this feature:

BLAST of Spo25800.1 vs. NCBI nr
BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
BLAST of Spo25800.1 vs. ExPASy Swiss-Prot
BLAST of Spo25800.1 vs. TAIR (Arabidopsis)

BLAST of Spo25800.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902179998\|gb\|KNA09452.1\|	1.0e-162	99.6	hypothetical protein SOVF_1535...	[more]
gi\|731326208\|ref\|XP_010673903.1\|	3.8e-117	73.4	PREDICTED: uncharacterized pro...	[more]
gi\|297735250\|emb\|CBI17612.3\|	3.0e-106	75.3	unnamed protein product [Vitis...	[more]
gi\|225430926\|ref\|XP_002277168.1\|	3.0e-106	75.3	PREDICTED: uncharacterized pro...	[more]
gi\|147819671\|emb\|CAN76393.1\|	1.6e-104	81.5	hypothetical protein VITISV_02...	[more]

BLAST of Spo25800.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QQB6_SPIOL	7.1e-163	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8CRY3_BETVU	2.6e-117	73.4	Uncharacterized protein OS=Bet...	[more]
F6GX17_VITVI	2.1e-106	75.3	Putative uncharacterized prote...	[more]
A5B3D0_VITVI	1.1e-104	81.5	Putative uncharacterized prote...	[more]
B9RM63_RICCO	9.1e-102	75.0	Putative uncharacterized prote...	[more]

BLAST of Spo25800.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo25800.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G65230.1	1.5e-100	66.1	Uncharacterized conserved prot...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018790	Protein of unknown function DUF2358	PFAM	PF10184	DUF2358	coord: 119..207 score: 9.
None	No IPR available	PANTHER	PTHR36334	FAMILY NOT NAMED	coord: 6..303 score: 2.2E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009507	chloroplast