Spo25849.1 (mRNA) | SpinachBase

Overview


Name	Spo25849.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Location	chr1 : 13330238 .. 13333943 (+)
Sequence length	1398

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGTTTCAGCTCTCTACCCGATTAACCTGACCTTATTATGAGCCGATCCGATAAGAACCCGACCAAGCCAAATAAACTCGTTTCAACCAGAACACAGTAACCCGACCCGTTAATACGAATCGACACCCCTCCTTCCTCAGTTCCTTGCAAGTTGTAAGAGTTGAAAGATTATCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACTACTGCTTCGTTAATGGTGAGAGAGATGACAATATTCCGGTATCTGCTGCATCCTTTACTCCTTGCTAAACCCCTCATTTCTTCCACTTCTTCCCCTTTCTGCACAGTCTTCTCTCTCCAGAATTCTCCGCACTTTTCATTTCCCATTAATCGAAGACGTCAGCAATATTCTCACGCATTCTCAGTTGAAAGTAGAAGACTAGCATCATCAGATTCGTCATCTTCAACCAATGTTCCCACTGACTCCTTTCCCAAGTTTTCTGGTATACTTTTTTTCTTCCCTTTCGATTAATTTGTGTTTTGTTCAAAATTTATGCAATTTTTTTTTTGTTTTTGATAAATTATAGTGTAATACTATCAGAATTTGAACCGGAGTTTTGGGTAATTGGAAACTGCTCCCATGTGAATTTTTTTTGTATGCTATTGATTTTTCTTGCCTTAATTTTATTGGGTTTTAGTTTTAGTGCGTAATTCAGGAATGGAAGTGGAAGGGAAATGACAGTATTAACTATTAGCATTATCAGTTGTTTGTATCAAATTGGGGATTGAGGAGGGTAACGATTTTGTTACATATGGTAACAAATGGTTGTACTGATTACCCTTAATGGTCACAATACGTTTGTACATCAAATTAAATTTAATAATAGGAACATGATAAACTGATTCTAAAACCAAAGGGCGACTGTTTGAATTTAATGTGACATTGCCAATACGTTTTATCAGGATTTTAGTAGCATTTGCATATCATGCTGAATCTAATACTTGCATATTAGGTAATTCTTGTATGATATTTTCTGGTCTGATTCTAATCCGAACAAGTTATTGGAATAAAGTGAAGAGTATACTTGACTTTGTCCTCATTTCAGACTGAATATTTATTATGTGTTAGAATCTTAGAAGGGTTTGGGGGCCATACATTTAGATGGGAGAGGCTTACCCCTTACAATTCCCTAATTAGCAATAGGTACTACGAAAAATGTAGAGGAGATACCGTAATTGCTAATTCCCTTTATCTTGCATACATTTGGATTGGAGAGGCTTACCACATACATTTGCTAATCCCCTTTATCTTGCAAAAGCTTTTGATTTATGTTAAGTGGGTGTCAATGTTTCTTCGCAGAGTTAGATGATGTTTTGAAGGGCTATATGTTTGGCCAGAAAAAGGCAACCGAAGTTGCTCATTTGTAGGTATTTGACTACTAAATTCCTTTTACCATGATTCTATACATGTGCCCTTATTTATTGTTCTCAAATTGATTCAAATACATGTTTTTTTGGTGTAAATGATTCAGATATATGTAGTGGTGTCTCTATTTCATTACTTTCTTAGAAACATGGTCATTATGGCTGTAAAGCTCTTACAGCTAACATATTTTTCAAGCATTCATTGTAAAATGGAGTGTTGCTTATAAGATCCCTGAATTTACCAAATCACATTGCCATGACTTGAATAAGCCTTTTTCTTTTTTTTTGAGGCATGAACCATTTCAACCATTGTTATCCTACTTGATTCCTGTCATTTTGTGCATCTTTTGTGAAACTTATTGTTCACAAGATCACAACTGCTCCTGAAACTAATATTGTGTATGCTTTTGTAAACCAACTCTATCTTATAGTTCTGTTAGATTACTCTAGGAACTCTTATTGATGTATATTTCCTTTGATTCTCATTGATTACAAAATTTGTTATTATCCCCAAAAGGGGAGAGGGTTATAAACTTTTAATCTAGAATCTGATGATCATCCTCGAATTAAGTCCTTCACGTGTATTATTTTCTCAATGGATAAGTAATTGCTCAATCTTTTTTTTTTTGTGTGTGACTATAGCCATCCACGTTTTCCATGTGCTAATATATCATTTCAATACAGGGTATGGAAACTTGTGGTTCAAAAGGGTGATACAGTTGTTGATGCTACTTGTGGTAATGGCAATGATACCGTGGCATTGGCCAAGTTGGTTGTAGATGATTTCGCTAAAGGGTGCGTATATGGGATGGATGTTCAGGAAGATGCTATACAGAATACTTCGTCCTTACTTAACCTGTCACTCGATCCAAACCAGGTGCAGTTACATTGTTGTGCATGCTTATATTTGTTAGTTTCTTCTTATGAGCATGTTCTCGTTTGGGAATTGTGTGGGCTGAGCAAGCTGTCTTCAGAAAAATGTCATCTTCTCTTACTTTTCTTTCTATTCTCATTTTTTGAACCTCTATCAGCTGGTTGGTAGGAAACTATCTACTTTCTTCTTTTCATTGACTTCACAAAAGGTTGTGCTCTTTACACAGCAACGTTCTAGACTCCGGTTCAACTTTCTCGAACAGAAAACCAGAAAGAAGCTTACCCGTATGCAAATTGTAAATGATGCCATATAATTCTCCAATTTTGTATATTTGCTCATTAGATTTTGTTTTAATTTATGTGTGTGCATCATAGGTTCACATGTTCCCACTTCTACGGGATTTCTTTTTGTTGCATTGTGACATTAACTCAAATCTCTTAATGCAGAGAAAGTGTGTGAAGCTATATTCAATCTGTCACAGTAGAATGGTGGATGTGATTCCTGAGAATAGCTCTGTGAGGTACTTTCTACAGACTGTAGATATTTATGTTATACCAGTAATATCAACCTTCACTTAAATATATGTTCAGATTATATACTAAAAGTCTAATATTATGCACTTTGTTTTGTTCTTTAAATATCCAATTAAGATTGCAGTTTATGCTTAACAGTACTTGAATATGGCTTTGTACAATGTACACTACTCTAGGCTTGTCGCGTTCAATTTGGGATACCTTCCCGGAGGTGACAAGGGAATAATCACAAACTCGGCTACAACCCTGCTGGCACTCAAAGCAGCAAAGGAATTGTTACTTCCTGGTGGAGTTATTAGTGTTGTTGCTTATGTTGGCCACCCTGGTGGAAGGTAATGCTTCTGTTAGTATATTAATCAAAATATTAAATTGTTAAATTTTTAACTTGGTTATAATTTGGAATATGTGTAATCTCACTTGTTTTACATAATGTAATTGTTAAATTTTAGCTTGGCTATAATTTCAGGGAAGAATATGAAACTGTGCAAGCTTTTGCTTCTGAGTTACCGGCAGAAAGATGGGTCTGCAGCCAAATTCAGATGTTAAACAAACCACTTGCACCAGTTCTTGTATTTTTGTTTAAGAGATGAAGCAATAATGATAATGAGATCTTCTAAACTATTTGGAAACCCAATTTTGCAGAAGTGCTCTAAAATTTCAATGCTTGTATCATCTGATTTGAGCCCATTTAACAATCTGCTGCTGCGCTTGTATCCTACTTTGTATATAGATAATAGACTCAATATGCTCTAGCCTTATCTTTATTAAATTTTCTGCTTCGGTCAATGGTTCGCCTGCTGAATGAGGCAGGCTTTGTTTAAGACTTTTAGCCATTGATGATGAATCTTGTAGAATTGCCTCTATATGTGTTGTTCTGCCAAAACTGATAATTCTTACACTTATTTTCAGT

mRNA sequence

ACGTTTCAGCTCTCTACCCGATTAACCTGACCTTATTATGAGCCGATCCGATAAGAACCCGACCAAGCCAAATAAACTCGTTTCAACCAGAACACAGTAACCCGACCCGTTAATACGAATCGACACCCCTCCTTCCTCAGTTCCTTGCAAGTTGTAAGAGTTGAAAGATTATCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACTACTGCTTCGTTAATGGTGAGAGAGATGACAATATTCCGGTATCTGCTGCATCCTTTACTCCTTGCTAAACCCCTCATTTCTTCCACTTCTTCCCCTTTCTGCACAGTCTTCTCTCTCCAGAATTCTCCGCACTTTTCATTTCCCATTAATCGAAGACGTCAGCAATATTCTCACGCATTCTCAGTTGAAAGTAGAAGACTAGCATCATCAGATTCGTCATCTTCAACCAATGTTCCCACTGACTCCTTTCCCAAGTTTTCTGAGTTAGATGATGTTTTGAAGGGCTATATGTTTGGCCAGAAAAAGGCAACCGAAGTTGCTCATTTGGTATGGAAACTTGTGGTTCAAAAGGGTGATACAGTTGTTGATGCTACTTGTGGTAATGGCAATGATACCGTGGCATTGGCCAAGTTGGTTGTAGATGATTTCGCTAAAGGGTGCGTATATGGGATGGATGTTCAGGAAGATGCTATACAGAATACTTCGTCCTTACTTAACCTGTCACTCGATCCAAACCAGAGAAAGTGTGTGAAGCTATATTCAATCTGTCACAGTAGAATGGTGGATGTGATTCCTGAGAATAGCTCTGTGAGGCTTGTCGCGTTCAATTTGGGATACCTTCCCGGAGGTGACAAGGGAATAATCACAAACTCGGCTACAACCCTGCTGGCACTCAAAGCAGCAAAGGAATTGTTACTTCCTGGTGGAGTTATTAGTGTTGTTGCTTATGTTGGCCACCCTGGTGGAAGGGAAGAATATGAAACTGTGCAAGCTTTTGCTTCTGAGTTACCGGCAGAAAGATGGGTCTGCAGCCAAATTCAGATGTTAAACAAACCACTTGCACCAGTTCTTGTATTTTTGTTTAAGAGATGAAGCAATAATGATAATGAGATCTTCTAAACTATTTGGAAACCCAATTTTGCAGAAGTGCTCTAAAATTTCAATGCTTGTATCATCTGATTTGAGCCCATTTAACAATCTGCTGCTGCGCTTGTATCCTACTTTGTATATAGATAATAGACTCAATATGCTCTAGCCTTATCTTTATTAAATTTTCTGCTTCGGTCAATGGTTCGCCTGCTGAATGAGGCAGGCTTTGTTTAAGACTTTTAGCCATTGATGATGAATCTTGTAGAATTGCCTCTATATGTGTTGTTCTGCCAAAACTGATAATTCTTACACTTATTTTCAGT

Coding sequence (CDS)

ATGGTGAGAGAGATGACAATATTCCGGTATCTGCTGCATCCTTTACTCCTTGCTAAACCCCTCATTTCTTCCACTTCTTCCCCTTTCTGCACAGTCTTCTCTCTCCAGAATTCTCCGCACTTTTCATTTCCCATTAATCGAAGACGTCAGCAATATTCTCACGCATTCTCAGTTGAAAGTAGAAGACTAGCATCATCAGATTCGTCATCTTCAACCAATGTTCCCACTGACTCCTTTCCCAAGTTTTCTGAGTTAGATGATGTTTTGAAGGGCTATATGTTTGGCCAGAAAAAGGCAACCGAAGTTGCTCATTTGGTATGGAAACTTGTGGTTCAAAAGGGTGATACAGTTGTTGATGCTACTTGTGGTAATGGCAATGATACCGTGGCATTGGCCAAGTTGGTTGTAGATGATTTCGCTAAAGGGTGCGTATATGGGATGGATGTTCAGGAAGATGCTATACAGAATACTTCGTCCTTACTTAACCTGTCACTCGATCCAAACCAGAGAAAGTGTGTGAAGCTATATTCAATCTGTCACAGTAGAATGGTGGATGTGATTCCTGAGAATAGCTCTGTGAGGCTTGTCGCGTTCAATTTGGGATACCTTCCCGGAGGTGACAAGGGAATAATCACAAACTCGGCTACAACCCTGCTGGCACTCAAAGCAGCAAAGGAATTGTTACTTCCTGGTGGAGTTATTAGTGTTGTTGCTTATGTTGGCCACCCTGGTGGAAGGGAAGAATATGAAACTGTGCAAGCTTTTGCTTCTGAGTTACCGGCAGAAAGATGGGTCTGCAGCCAAATTCAGATGTTAAACAAACCACTTGCACCAGTTCTTGTATTTTTGTTTAAGAGATGA

Protein sequence

MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVESRRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYVGHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25849	Spo25849	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25849.1	Spo25849.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25849.1.exon.1	Spo25849.1.exon.1	exon
Spo25849.1.exon.2	Spo25849.1.exon.2	exon
Spo25849.1.exon.3	Spo25849.1.exon.3	exon
Spo25849.1.exon.4	Spo25849.1.exon.4	exon
Spo25849.1.exon.5	Spo25849.1.exon.5	exon
Spo25849.1.exon.6	Spo25849.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25849.1.utr5p.1	Spo25849.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25849.1.CDS.1	Spo25849.1.CDS.1	CDS
Spo25849.1.CDS.2	Spo25849.1.CDS.2	CDS
Spo25849.1.CDS.3	Spo25849.1.CDS.3	CDS
Spo25849.1.CDS.4	Spo25849.1.CDS.4	CDS
Spo25849.1.CDS.5	Spo25849.1.CDS.5	CDS
Spo25849.1.CDS.6	Spo25849.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25849.1.utr3p.1	Spo25849.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo25849.1 vs. NCBI nr
Match: gi|902238834|gb|KNA25345.1| (hypothetical protein SOVF_007390 [Spinacia oleracea])

HSP 1 Score: 563.5 bits (1451), Expect = 2.100e-157
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1


		  
Query: 1   MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVES 60
           MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVES
Sbjct: 1   MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVES 60

Query: 61  RRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDA 120
           RRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDA
Sbjct: 61  RRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDA 120

Query: 121 TCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICH 180
           TCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICH
Sbjct: 121 TCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICH 180

Query: 181 SRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYV 240
           SRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYV
Sbjct: 181 SRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYV 240

Query: 241 GHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           GHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR
Sbjct: 241 GHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 286

[Close]

BLAST of Spo25849.1 vs. NCBI nr
Match: gi|731318938|ref|XP_010669993.1| (PREDICTED: uncharacterized protein LOC104887102 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 397.5 bits (1020), Expect = 2.000e-107
Identity = 202/282 (71.63%), Postives = 235/282 (83.33%), Query Frame = 1


		  
Query: 5   MTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVESRRLA 64
           MT  R+L HP+ LAKP ++ST +P C     QN+   S P   R Q+YS   +      +
Sbjct: 1   MTTLRFLSHPISLAKPFLASTLTPSCNFLFRQNTSQCSSPFFWRCQKYSDGST------S 60

Query: 65  SSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDATCGN 124
           SS SSSS NV TD+ P FS +DDVLKGY+FGQKKATEVAHLVW+LVVQKGDTVVDATCGN
Sbjct: 61  SSSSSSSINVFTDTVPNFSGVDDVLKGYLFGQKKATEVAHLVWELVVQKGDTVVDATCGN 120

Query: 125 GNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICHSRMV 184
           GNDT+AL+KLV+DD A+GC+Y +DVQEDAI+NTSSLL+LSLDPNQRK VK++ ICHSRM 
Sbjct: 121 GNDTLALSKLVIDDLAEGCIYALDVQEDAIKNTSSLLDLSLDPNQRKSVKIFQICHSRME 180

Query: 185 DVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYVGHPG 244
           +V+P+N SVRLVAFNLGYLPGGDK IIT+SA+TLLAL+AAK+LLLPGG+ISVVAYVGHPG
Sbjct: 181 EVLPKNRSVRLVAFNLGYLPGGDKRIITSSASTLLALEAAKDLLLPGGLISVVAYVGHPG 240

Query: 245 GREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           GREEYE V+AFAS LP ERWVCS IQMLNKPLAP L+FLFKR
Sbjct: 241 GREEYEIVRAFASGLPVERWVCSHIQMLNKPLAPALIFLFKR 276

[Close]

BLAST of Spo25849.1 vs. NCBI nr
Match: gi|731434652|ref|XP_002263914.3| (PREDICTED: uncharacterized protein LOC100252956 [Vitis vinifera])

HSP 1 Score: 300.1 bits (767), Expect = 4.300e-78
Identity = 147/252 (58.33%), Postives = 194/252 (76.98%), Query Frame = 1


		  
Query: 38  SPHFSFPINRRRQQYSHAFSVESRR---LASSDSSSSTNVPTDSFPKFSELDDVLKGYMF 97
           S  F  P  +R   +S    + + R     S   + + +V   +   FS ++DVL GY+F
Sbjct: 8   SHRFPIPCEKRLTNFSRRSWLAAARGNLSCSFAQNGNMDVSLSNNSTFSGMEDVLMGYIF 67

Query: 98  GQKKATEVAHLVWKLVVQKGDTVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAI 157
           G++KAT VAHLVWK VVQKGDTVVDATCGNG DT+A+ K+V D   +GCVYGMD+Q+DA+
Sbjct: 68  GKEKATRVAHLVWKHVVQKGDTVVDATCGNGYDTLAMLKMVADGSGRGCVYGMDIQKDAL 127

Query: 158 QNTSSLLNLSLDPNQRKCVKLYSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNS 217
           +NTSSLLN S++P +++ VKL++ICHSRM +V+P+++++RLVAFNLGYLPGGDK + T S
Sbjct: 128 ENTSSLLNESVNPIEKELVKLFTICHSRMEEVVPKSTTLRLVAFNLGYLPGGDKEVTTTS 187

Query: 218 ATTLLALKAAKELLLPGGVISVVAYVGHPGGREEYETVQAFASELPAERWVCSQIQMLNK 277
           ATT+LAL+AA  +L  GG+IS++ YVGHPGGR+E ET+QAFASEL  E WVCS+ QMLN+
Sbjct: 188 ATTILALQAATRILASGGLISLIVYVGHPGGRDELETIQAFASELSVEDWVCSEFQMLNR 247

Query: 278 PLAPVLVFLFKR 287
           PLAPVL+FLFKR
Sbjct: 248 PLAPVLIFLFKR 259

[Close]

BLAST of Spo25849.1 vs. NCBI nr
Match: gi|734438041|gb|KHN48884.1| (Putative rRNA methylase ytqB [Glycine soja])

HSP 1 Score: 293.9 bits (751), Expect = 3.000e-76
Identity = 144/231 (62.34%), Postives = 182/231 (78.79%), Query Frame = 1


		  
Query: 56  FSVESRRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGD 115
           FSV S   +SS SSS    P DS   FS L+D L  Y+FG+K+AT++AH+VWK VVQKGD
Sbjct: 60  FSVASDLQSSSFSSS---FPKDS--PFSGLEDALVSYLFGKKRATDIAHMVWKHVVQKGD 119

Query: 116 TVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKL 175
           TV+DATCGNG DT+A+  LV DD   GCVY +D+Q+DA+ NTS LL  SL+PN+++ VKL
Sbjct: 120 TVIDATCGNGFDTLAMLNLVADDSHNGCVYALDIQKDALDNTSLLLEESLNPNEKQLVKL 179

Query: 176 YSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVIS 235
           ++ICHS+M + +P N+SVRLVAFNLGYLPGGDK IIT S TTLLAL+AAK +L+PGG+IS
Sbjct: 180 FNICHSKMENAVPRNASVRLVAFNLGYLPGGDKEIITRSKTTLLALEAAKRILMPGGLIS 239

Query: 236 VVAYVGHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           +V YVGHPGGREE E V++FA  L  E W+C ++QMLN+P AP+ +FLFKR
Sbjct: 240 IVVYVGHPGGREELEVVESFAGRLCVENWICCKLQMLNRPCAPIPIFLFKR 285

[Close]

BLAST of Spo25849.1 vs. NCBI nr
Match: gi|727607307|ref|XP_010476756.1| (PREDICTED: uncharacterized protein LOC104755966 [Camelina sativa])

HSP 1 Score: 293.1 bits (749), Expect = 5.200e-76
Identity = 154/273 (56.41%), Postives = 203/273 (74.36%), Query Frame = 1


		  
Query: 16  LLAKPLISSTSSPFC-TVFSLQNSPHFSFPINRRRQQYSHAFSVESRRLASSDSSSSTNV 75
           +L+  L  S S PF  T+ SL       F I  RR  ++    +   R+A+  SS S + 
Sbjct: 3   MLSSTLARSYSIPFRKTLMSLD------FRIAMRRNPFTR---IRCSRVAAFSSSPSHS- 62

Query: 76  PTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDATCGNGNDTVALAKL 135
              +FP    L+DV  GY+FG+KKATEVAH+VW+ V+QKGD V+DATCGNGNDT+A+ K+
Sbjct: 63  --PNFP-IPGLEDVFIGYLFGRKKATEVAHVVWEKVIQKGDMVIDATCGNGNDTLAMLKM 122

Query: 136 VVDD-FAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICHSRMVDVIPENSSV 195
           V+DD  + GCVY MD+Q+DAIQ+TSSLL+ +L   ++ CVKL++ICHS+M +++ ENS V
Sbjct: 123 VMDDSISGGCVYAMDIQKDAIQSTSSLLDQTLGSKEKDCVKLFNICHSKMEEIVSENSRV 182

Query: 196 RLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYVGHPGGREEYETVQ 255
           R+VAFNLGYLPGG+K IIT S TTLLALKA++ +L+PGG+IS+V Y+GHPGGREE E V+
Sbjct: 183 RMVAFNLGYLPGGNKSIITVSGTTLLALKASERILMPGGLISLVVYIGHPGGREELEVVE 242

Query: 256 AFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           AF S LP   WVC ++QMLN+PLAPVLVF+FKR
Sbjct: 243 AFGSSLPVSDWVCCKLQMLNRPLAPVLVFMFKR 262

[Close]

BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0R3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007390 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 1.400e-157
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1


		  
Query: 1   MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVES 60
           MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVES
Sbjct: 1   MVREMTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVES 60

Query: 61  RRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDA 120
           RRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDA
Sbjct: 61  RRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDA 120

Query: 121 TCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICH 180
           TCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICH
Sbjct: 121 TCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICH 180

Query: 181 SRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYV 240
           SRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYV
Sbjct: 181 SRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYV 240

Query: 241 GHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           GHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR
Sbjct: 241 GHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 286

[Close]

BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CZL7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g038190 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.400e-107
Identity = 202/282 (71.63%), Postives = 235/282 (83.33%), Query Frame = 1


		  
Query: 5   MTIFRYLLHPLLLAKPLISSTSSPFCTVFSLQNSPHFSFPINRRRQQYSHAFSVESRRLA 64
           MT  R+L HP+ LAKP ++ST +P C     QN+   S P   R Q+YS   +      +
Sbjct: 1   MTTLRFLSHPISLAKPFLASTLTPSCNFLFRQNTSQCSSPFFWRCQKYSDGST------S 60

Query: 65  SSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGDTVVDATCGN 124
           SS SSSS NV TD+ P FS +DDVLKGY+FGQKKATEVAHLVW+LVVQKGDTVVDATCGN
Sbjct: 61  SSSSSSSINVFTDTVPNFSGVDDVLKGYLFGQKKATEVAHLVWELVVQKGDTVVDATCGN 120

Query: 125 GNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKLYSICHSRMV 184
           GNDT+AL+KLV+DD A+GC+Y +DVQEDAI+NTSSLL+LSLDPNQRK VK++ ICHSRM 
Sbjct: 121 GNDTLALSKLVIDDLAEGCIYALDVQEDAIKNTSSLLDLSLDPNQRKSVKIFQICHSRME 180

Query: 185 DVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVISVVAYVGHPG 244
           +V+P+N SVRLVAFNLGYLPGGDK IIT+SA+TLLAL+AAK+LLLPGG+ISVVAYVGHPG
Sbjct: 181 EVLPKNRSVRLVAFNLGYLPGGDKRIITSSASTLLALEAAKDLLLPGGLISVVAYVGHPG 240

Query: 245 GREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           GREEYE V+AFAS LP ERWVCS IQMLNKPLAP L+FLFKR
Sbjct: 241 GREEYEIVRAFASGLPVERWVCSHIQMLNKPLAPALIFLFKR 276

[Close]

BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
Match: D7T0W8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g00290 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.000e-78
Identity = 147/252 (58.33%), Postives = 194/252 (76.98%), Query Frame = 1


		  
Query: 38  SPHFSFPINRRRQQYSHAFSVESRR---LASSDSSSSTNVPTDSFPKFSELDDVLKGYMF 97
           S  F  P  +R   +S    + + R     S   + + +V   +   FS ++DVL GY+F
Sbjct: 8   SHRFPIPCEKRLTNFSRRSWLAAARGNLSCSFAQNGNMDVSLSNNSTFSGMEDVLMGYIF 67

Query: 98  GQKKATEVAHLVWKLVVQKGDTVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAI 157
           G++KAT VAHLVWK VVQKGDTVVDATCGNG DT+A+ K+V D   +GCVYGMD+Q+DA+
Sbjct: 68  GKEKATRVAHLVWKHVVQKGDTVVDATCGNGYDTLAMLKMVADGSGRGCVYGMDIQKDAL 127

Query: 158 QNTSSLLNLSLDPNQRKCVKLYSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNS 217
           +NTSSLLN S++P +++ VKL++ICHSRM +V+P+++++RLVAFNLGYLPGGDK + T S
Sbjct: 128 ENTSSLLNESVNPIEKELVKLFTICHSRMEEVVPKSTTLRLVAFNLGYLPGGDKEVTTTS 187

Query: 218 ATTLLALKAAKELLLPGGVISVVAYVGHPGGREEYETVQAFASELPAERWVCSQIQMLNK 277
           ATT+LAL+AA  +L  GG+IS++ YVGHPGGR+E ET+QAFASEL  E WVCS+ QMLN+
Sbjct: 188 ATTILALQAATRILASGGLISLIVYVGHPGGRDELETIQAFASELSVEDWVCSEFQMLNR 247

Query: 278 PLAPVLVFLFKR 287
           PLAPVL+FLFKR
Sbjct: 248 PLAPVLIFLFKR 259

[Close]

BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
Match: A0A0B2SWH0_GLYSO (Putative rRNA methylase ytqB OS=Glycine soja GN=glysoja_019393 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.100e-76
Identity = 144/231 (62.34%), Postives = 182/231 (78.79%), Query Frame = 1


		  
Query: 56  FSVESRRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGD 115
           FSV S   +SS SSS    P DS   FS L+D L  Y+FG+K+AT++AH+VWK VVQKGD
Sbjct: 60  FSVASDLQSSSFSSS---FPKDS--PFSGLEDALVSYLFGKKRATDIAHMVWKHVVQKGD 119

Query: 116 TVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKL 175
           TV+DATCGNG DT+A+  LV DD   GCVY +D+Q+DA+ NTS LL  SL+PN+++ VKL
Sbjct: 120 TVIDATCGNGFDTLAMLNLVADDSHNGCVYALDIQKDALDNTSLLLEESLNPNEKQLVKL 179

Query: 176 YSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVIS 235
           ++ICHS+M + +P N+SVRLVAFNLGYLPGGDK IIT S TTLLAL+AAK +L+PGG+IS
Sbjct: 180 FNICHSKMENAVPRNASVRLVAFNLGYLPGGDKEIITRSKTTLLALEAAKRILMPGGLIS 239

Query: 236 VVAYVGHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           +V YVGHPGGREE E V++FA  L  E W+C ++QMLN+P AP+ +FLFKR
Sbjct: 240 IVVYVGHPGGREELEVVESFAGRLCVENWICCKLQMLNRPCAPIPIFLFKR 285

[Close]

BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
Match: I1MJB8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G260800 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.100e-76
Identity = 143/231 (61.90%), Postives = 181/231 (78.35%), Query Frame = 1


		  
Query: 56  FSVESRRLASSDSSSSTNVPTDSFPKFSELDDVLKGYMFGQKKATEVAHLVWKLVVQKGD 115
           FSV S   +SS SSS    P DS   FS L+D L  Y+FG+K+AT++AH+VWK VVQKGD
Sbjct: 60  FSVASDLQSSSFSSS---FPKDS--PFSGLEDALVSYLFGKKRATDIAHMVWKHVVQKGD 119

Query: 116 TVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQNTSSLLNLSLDPNQRKCVKL 175
           TV+DATCGNG DT+A+  LV DD   GCVY +D+Q+DA+ NTS LL  SL+PN+++ VKL
Sbjct: 120 TVIDATCGNGFDTLAMLNLVADDSHNGCVYALDIQKDALDNTSLLLEESLNPNEKQLVKL 179

Query: 176 YSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIITNSATTLLALKAAKELLLPGGVIS 235
           ++ICHS+M + +P N+S RLVAFNLGYLPGGDK IIT S TTLLAL+AAK +L+PGG+IS
Sbjct: 180 FNICHSKMENAVPRNASFRLVAFNLGYLPGGDKEIITRSKTTLLALEAAKRILMPGGLIS 239

Query: 236 VVAYVGHPGGREEYETVQAFASELPAERWVCSQIQMLNKPLAPVLVFLFKR 287
           +V YVGHPGGREE E V++FA  L  E W+C ++QMLN+P AP+ +FLFKR
Sbjct: 240 IVVYVGHPGGREELEVVESFAGRLCVENWICCKLQMLNRPCAPIPIFLFKR 285

[Close]

BLAST of Spo25849.1 vs. ExPASy Swiss-Prot
Match: YTQB_BACSU (Putative rRNA methylase YtqB OS=Bacillus subtilis (strain 168) GN=ytqB PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.300e-21
Identity = 63/165 (38.18%), Postives = 93/165 (56.36%), Query Frame = 1


		  
Query: 97  KKATEVAHLVWKLVVQKGDTVVDATCGNGNDTVALAKLVVDDFAKGCVYGMDVQEDAIQN 156
           KK    +  + K+   +GD VVDAT GNG+DT  LA+LV ++   G VY  D+QE A+ N
Sbjct: 4   KKILPYSKELLKMAAGEGDIVVDATMGNGHDTQFLAELVGEN---GHVYAFDIQESAVAN 63

Query: 157 TSSLLNLSLDPNQRKCVKLYSICHSRMVDVIPENSSVRLVA--FNLGYLPGGDKGIITNS 216
           T   L    D  Q +   L+   H ++ + +P  +  ++ A  FNLGYLPGGDK I TN 
Sbjct: 64  TKERLG---DMYQARTT-LFHKSHDKIAESLPPETHGKVAAAVFNLGYLPGGDKSITTNG 123

Query: 217 ATTLLALKAAKELLLPGGVISVVAYVGHPGGREEYETVQAFASEL 260
           ++T+ A++    ++   G+I +V Y GHP G+ E   V  F  +L
Sbjct: 124 SSTIKAIEQLLSIMKDEGLIVLVVYHGHPEGKAEKNDVLEFCRDL 161

[Close]

BLAST of Spo25849.1 vs. TAIR (Arabidopsis)
Match: AT1G16445.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 279.3 bits (713), Expect = 2.700e-75
Identity = 139/254 (54.72%), Postives = 193/254 (75.98%), Query Frame = 1


		  
Query: 41  FSFPINRRRQQYSHAFSVESR---RLASSDSSSSTNVPTDS--FPKFSELDDVLKGYMFG 100
           +S PI +    +    +++     R+  S  ++ ++ P+ S  FP    L+DV  GY+FG
Sbjct: 21  YSLPIRKTLMTFDFRIAMQRNPCLRIRRSCVAAFSSTPSHSRNFP-IRGLEDVFVGYLFG 80

Query: 101 QKKATEVAHLVWKLVVQKGDTVVDATCGNGNDTVALAKLVVDDFAKGC---VYGMDVQED 160
           +KKATEVAH+VW+ V+QKGDTV+DATCGNGNDT+A+ K+V+ D + GC   VY MD+Q+D
Sbjct: 81  RKKATEVAHVVWEQVIQKGDTVIDATCGNGNDTLAMLKMVMHD-SVGCGGYVYAMDIQKD 140

Query: 161 AIQNTSSLLNLSLDPNQRKCVKLYSICHSRMVDVIPENSSVRLVAFNLGYLPGGDKGIIT 220
           AI++TSSLL+ ++   +++CVKL+++CHS+M +++PEN+ VR+VAFNLGYLPGG+K IIT
Sbjct: 141 AIESTSSLLDQAVGSKEKECVKLFNLCHSKMGEIVPENARVRMVAFNLGYLPGGNKSIIT 200

Query: 221 NSATTLLALKAAKELLLPGGVISVVAYVGHPGGREEYETVQAFASELPAERWVCSQIQML 280
            S TTL ALKAA+ +L PGG+IS+V Y+GHPGGREE E V+AF S LP   W+C + QML
Sbjct: 201 LSDTTLSALKAAERILKPGGLISLVVYIGHPGGREELEVVEAFGSGLPVSDWICCKFQML 260

Query: 281 NKPLAPVLVFLFKR 287
           N+PLAPVLVF+FKR
Sbjct: 261 NRPLAPVLVFMFKR 272

The following BLAST results are available for this feature:

BLAST of Spo25849.1 vs. NCBI nr
BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
BLAST of Spo25849.1 vs. ExPASy Swiss-Prot
BLAST of Spo25849.1 vs. TAIR (Arabidopsis)

BLAST of Spo25849.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238834\|gb\|KNA25345.1\|	2.1e-157	100.	hypothetical protein SOVF_0073...	[more]
gi\|731318938\|ref\|XP_010669993.1\|	2.0e-107	71.6	PREDICTED: uncharacterized pro...	[more]
gi\|731434652\|ref\|XP_002263914.3\|	4.3e-78	58.3	PREDICTED: uncharacterized pro...	[more]
gi\|734438041\|gb\|KHN48884.1\|	3.0e-76	62.3	Putative rRNA methylase ytqB [...	[more]
gi\|727607307\|ref\|XP_010476756.1\|	5.2e-76	56.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo25849.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0R3_SPIOL	1.4e-157	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CZL7_BETVU	1.4e-107	71.6	Uncharacterized protein OS=Bet...	[more]
D7T0W8_VITVI	3.0e-78	58.3	Putative uncharacterized prote...	[more]
A0A0B2SWH0_GLYSO	2.1e-76	62.3	Putative rRNA methylase ytqB O...	[more]
I1MJB8_SOYBN	8.1e-76	61.9	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo25849.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
YTQB_BACSU	1.3e-21	38.1	Putative rRNA methylase YtqB O...	[more]

BLAST of Spo25849.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G16445.1	2.7e-75	54.7	S-adenosyl-L-methionine-depend...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010719	Putative rRNA methylase	PFAM	PF06962	rRNA_methylase	coord: 144..284 score: 1.7
None	No IPR available	PANTHER	PTHR35276	FAMILY NOT NAMED	coord: 59..286 score: 7.0
None	No IPR available	PANTHER	PTHR35276:SF1	SUBFAMILY NOT NAMED	coord: 59..286 score: 7.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0008168	methyltransferase activity