Spo25853.1 (mRNA) | SpinachBase

Overview


Name	Spo25853.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Chaperone dnaJ-like protein
Location	chr1 : 13280043 .. 13292499 (-)
Sequence length	1080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGCAGTAAGGAACACACTCGTCCGTCGCCAATGGACAAACCATAAGTTATAGAAGTGGAACCACCACTAATAACATGAACGAGTGGTGATCGGAGAAACTGGGCGCCACAAAAACATGCTCTGTTCAGGTCGAATTTTGGCGGTTTATCACCCTAAAAACCCCTTAATTTCCTACCACAACTACTCTTCATCTTCATCTTCATCTTCATCTTCATCTTCCAGATTAATTCGCAGAAACCTCCAACTCCCTCCGACATGGCGCTGTTTCTCGTCGTCTATGGCTTCCGAATCCGATCCTTCTCCCTTCCCTTCTGCTTTCCCTGATTCCGGCGAAACTTCCGACAGAACCAGCTCCGCGTAATTCTCTGTCTTTCCCTTGTGCTTCTGTTTGGTGTTTGAATGTTTAAAGCTTTGTGATTTTGTTAATTTATTGTTCAATTTGTTGCTGTTTGAGTTCTTTGTTTTGTGACATAGCCATTTAATTTTTAACCTGATTGTACTTTAGAATCTTGAAATGGTTAATCCGAGTTCAGAAAGTATGCTTTGTTGGGAATTAAACGCAACTTAATTTAATTAAATGGACGACAGCTTGTATTGGGGTTTGGAGTCAAAGCTCAGTTTGTCAACCTACTAATTGCGGAGTTGCTAGAAGAATCTTAACATACTTTGATTTCTTTGTTAGTCTCCTAACTAAACATGAGTTTTGGAGGTCAGTGGAACCAACAAAGAATTTAGGCAACTATGTAATTGGTTTTTGGCAGATTCCATATTGGTTGGTTATTATGCTAGTTTCCTAGATTAATGGGATATGTAATTAGGAAATTGAGATAGGTTTTGGTATGTTACATATGTAGGTGAAACTAGAATGTCAGACTTGGGCGGCAAGTTTATATATCCTAGTCTACTAGGGTTTCTAGTTTAGCCAATAAGAGGGAAAATACATTGGTGAGAGGATTAATCAATTGAGGGGTTATTGTATTATTTTGCAGGAACTTAATAATACGATATTATTTCAGGGGAGGAAATCTAAATTTCCTCACAAACACTAGTGTCTTTATTATTGTTTTTGCAAATAACTTTGGTAATGGCAGCCCGTTGAGTCATTGGGTGCATTAACGTGTTAGGTTACTCAGACTCTTCATTTTACTTCAATTATCCATGTTGGTCTGTTGGATAATTGAAACTAGGACATGTTTATGGCACTCAGACACTTTATTTTGGAGACATATGAATTCAATGTTTAACCCTTATAGTATTCTTTATTTAGCTTTAATGTAAAAGGGAACAAACCAGAGGATTTAGACATACTTCTACAGAAATGAAAGCACTCGTTCACTGAACTGTGACACCACTAACACCGCAAATAAGGCGGTGCTGTAGAATGAAGAGAAGAATTGATGTTATCCTGATAGATGGTTCTAGTCTATATGCTTGCTATGTTTTATTGAGTCAGTGAGGACATTTCGTGTAACTGTTAACTACACTTTGTGCACAATCAACCATATGTTGCGAATGCACTGACCTTGGTTATGAGGATTTCTAAACGTCAAGTGGGCCAAGTGGCTTGTGATCAATTGGACACAGGTCACCCCAGTACAACCATTTTTAGTACCAACACAGTATATGTCTGTACCAATAAGACAATGACTCGTATCAGTACTCCTTAACAGTGCATTGGTATACTAATACCACACTAGTCTCAGTACGAATACCAAATTAATGGGTACCAATAAAAGTCACTTGCGTCCATTTTGGATATAAGCCACTTTTGACATAGACATCCTCCCTTGGTTACACCGGTAAGAGTCTAATTAAGAAGCAGACATATAGATTAATTTTACGTCCCCATCTAGAACGAAAACCCTTAGTTTGGTTTGCAATATTGCTATAGATTCCTGTCCTATATGAAGTTTAATCTATATATTTACGAGATTTTTTCTTGTTTTTTGTGATGATATTTAGTTTTGATGTTATGATCTATTGCAGATTTTGTATTATAGAAGGGCCTGAAACAGTTGAGGACTTTGCTAAAATGGAATCGCAAGAAATTCAAGATAATATTCTGAGCCGCCGAAATAAAATCTTCTTGCTTATGGAAGAGGTTAGTACGAAAGAAGTTAATTCTTTGTCAATTACATGAAAAATGTTGATTTTCACCATCCCACTTTGAGAGGACGGTTAACTGTGCTTTCATACCAAAAACCTGACAATTGGTGCGACACTTTTCTATGGAAAAAGTGTGAAAAATAAGATATCGTGTTTTCTCAAGTTATGTTTCAATGTGGAATAATGTAAAGGTGAAAAGTTTGTTCCTCTATGTGAAATATGTGAAGTGTGAAGGTGCTACATTTGTTTTCTTAGTGGTTCGTAAGCTATATAGATTTTTGGATTTCATCCTGAAACGACATGTGTTGTATTCAGTGCAGTCTACTTCGTTTGTCTTATCAGTGTCCATGCCCTCAACTGTCTACTCAACTTTTTTTTGTTAAAATGAATTTTTTTATATTCTTCGTCAATGGAAGTAATTGTCTGACTCAAAATATTTGTCTTAAAGGTTCGAAGGCTACGGATACAACAGCGAATCAAAAGAGCTGAGCTGGGAATCTTAAAGGAGGAACAGGAAAATGAACTACCAAGCTTTCCATCTTTTATCCCATTTTTGCCTCCTCTGGTAAGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNCCCCCCCCCCCCTCCCCCCACATTCTAGCATCTTTCAATGTCATTATTTTACTACATTCTTGTTTCTTCCGTTTATGTTTTTTTGTTGGTTCCTTTTTATGGTTTGTGATTTCCTCTTTGGTCTTCTGATTTAGGGCGTATTCGGAGGTAGCAGGTAGCGTTTTGACTTACTCAAAACGCTACTTGAAAATAAGTGTTTGGCAGGGTAGCTGTTGGGTATTTTTTCTCAAACTTTAAATATATTAGAGTTCAAAGTTAGTGGAGAGTGTTTGATAAAATTATAGTAAAATTTAAAACAATATATGTAGCTTTTATAGTACTTTACAATCTCAATCGCTACTTTTACGAACAATCATACTAGTTACCCGCTAATCAATCGCTACTTTTACGAACAATCATACTAGTTACCCGCTAATCAATCGCTACCGCTAATTTTGCTCAACAGGGCCTTAAGCATCTTTCAATGTCATTATTTTTTTGTTGCATTCACTGTACTGACTGACTATCATTCAACCACTTGCAGAGCTCGACGAACCTCAACCAATATTATGCTACCTGTTTCTCTCTTATTGCTGGAATTATGGTTTTTGGCGGTCTTCTAGCACCTGCAGTAAGTATACTCTAATCCAAATTGGAAGTTTAACTGCGGAAAAAATGTTCTTTTGGCCTGTTCTTGACCTTATTGATTTATCAGCTTCTTGTCGAGTCTGCAATTGTTTATCAGTTTTCTCATATGAAAACATTTGTCTGTAAAGACTGTGGCTCTATGCATTTTGTGCACATGGGGGTGGTTTTCAATTTTCTGGAGTCCCAAATGCATACCTCTTGCTTGTTTACAAAGGCGCGGGCATTAAACTGGTAGGTTAGGACCTCTTGGAAACTCCTTAGGAGTCAGGTTGAAACCCCACACTCCTATTTAGTTTTTCTGAAACACATTTCCAGGTATCTTTCCTCGCCCAACATTGTCAATTTAATATGACATGGAACATTGTCAATTTGACCTTCAGGTAGTGTTTATGATCTCAAGTTATGTCCTGTATGTCTGGGGTTTGCATTTCTGGATAATTGATTTTTGGAAAAAGCAAATGGTAACATGTCATAGACTAAGTTGGCATGCATTGATGCATATTGACTATACCAAAATAAGAGAAGTTCAATGACTGATAACTGAGGCATACCTCTAAATCTATATGCATTGAGTTGGTAACTACTTAAGTTCAATGATGCTTTTTAATACTATCAGAACAAAAGTTTTATCTTCCTTGACTGAGTCATACTTCTAATCTGTATGGATCATGTTGGCAATTAGGCACACATGAATAGGTGTGCTTCAACTGTATCATATACTATATTCTTATTCCTTAACTGAGGCACAACTCTAATTCTACAGTCTTACTGCAGTTGGAGCTCAAATTGGGATTGGGGGGAACATCATATGAAGATTTCATCCAGAGTATGCATTTGCCAATGCAGTTGAGGTATGACTGCTACCTTTCTTGCCTCCTGAAAAATAAGCACCTTCAAAAATATTTTTGCTTGCTGTCTTGGACAAGCAATATGCATATTGATGGAAGTTCCTTCTTTTAAGATCACTCATCATTATCATTATCATTACCCCATTGCCTCAAAGAGGCTCCCGCAAGAAGCGGGGTTAGGGGGGGTCGGGGGTACGCAACCTTACCCCTGCAATTGCAGAGAGGTTGTTTCCAATTGACCCAAAAGCGATAACGGGACGACAACGGGACGGCCATCTTCTACTTCATGGAAAGGAAGCGAAGAGGTTTTAAGAGCCATTTTGATTTAGTCCATTACATCCCACAACCAAAAGAACCTTCTTTTTAGATCACTAACTTGTTTAATTTATGTCCATTTTTTGTTTCTATCAATGTATGGTTAAGTTAACTAAGGCTTTGTTGTTGTTGTTGTTGTATGGTTAAAGTGAACTAGTATATAGGGATGAAGTTCTACTTGGCTGGAAATGTGTCGTGTGCTGGTTACTTTTACATGTTGACCAAGTTCACTAATTTACTACTGAAACTTTATTCAGGGATTTTGTAGACCTCTAAATTTATTTATTTTTGACAATTCGTAATAAAAATATAAACTAGAAAGATACCAAGAGGTCGTCATCCATACACAAAAGCAAGTATAAGGACAAAAAAAATATCATAAACTTGGCAATTTTCTACAGAATTAAGGAATGTCAAAATGTCAGTGAAATCTACAGCAATACAAAAGCCCCGAAAATGGAAAATGAGAACTTGTTTAGGGGAATCTCTACCCTCAAAGCACCATTGATTTCTTTTATTCCAAGCCCACTGCCAAATTCCCAACGAAAGCATCTTTCTTACTTTTGCAAACCAACCTTTCTTCTCCGTCCTTTTCAAGCTACAAGAACATTATTTCACATAACAATGTTGTCCCCCAACTTATCCCAAGCACCGCAAACAGGTTTGACACCGCTGTTGCTGTTCACTTGAATGGTCAGCATGTTATGACCCCAGAGGGCCACCCAGAGCTTTTGTCCCACCAATTCAACAAGGACCACATCTGGAAACGCTTAACATTACTTGATGCCAGCCTTCTCAAATCAAATGTAACCACTACCTTGCATATCCTTTTTCGGTGAGTGTCATTTTAAAAGAAAAAGACAAACAGGGAGGAAACAAAAGGTTGTGGACTCAGTTACCACAAAGATCAAAATCTGACCACCAGTGAATCTCAGTTTTCCCAATTGCATAAATATACCTGCGTTCAGGATTTTTAAGGCAGATAGTAGAACGTAGGATTTTACTTTGCTGTGATTTGGATAGAAGTATTACAGTGTTAGAGTTATATTTGTGATATGCTTCCATGTCAACTCATTTCTCCGCAATACTCTTATTCACATATTTCTCTAACAACACTTAATTCGTTGAAAATTACTCCTACCATTATAACCCAAATTATTGCATATCCTTGACCCTTAAACACAATTTTCATCACTAATCCTCTGGTAACCAAATTTCCATATCAATTCTCAATTCTTCGATTTGAAGTTGCGAACTCTAAGCTTTTTCTGCCATAAACAATACATATATTCCTTAACTCTTACTTAGCCCAGTATACCTATTCCCAATTCATACTCCATGATATGAAGATCATAGCTAACCCAAAACCAACCCTGGCTGACAGCTGACACCATAGTTCAGCTTCATCACCGTTTCGGCTTAGCTTTCAAACATATGATGCACTAGCTTTGAATAGAACATGTCAAACTTAGTAAACACGTATAATCTGTCCATAGTTCCATACTCCTGTTTACGCTTAGGATCATCTAGATACTTACCACTAACAGTATCAGTTTGAGTTTTGTGGTTTCCTATGCTATTGTCACTTTGGATATACACAACTTCTGTTGCTCCAACTCTACACTTTACCTTGTTATACCATGTCAGGCAGTCAGGGTCACATAAGAGTATAAGATACCTGGAATAGATTAAGATACTTGGGTATGAACCTTGAGAAATATTAGATAAACATAAATAGACATATCTATGTTATATACTTCTAAGGATAATGCGTCCTTCTTTAAAAGTCTTGAGTAATATAGTGTACAGAAGCATTTCCCTCCTAGATTTTTATTTATAGCTTGTGCTTTGCACGTATTTTATTGTTATTTTTTCTTCGGGTATTTTTCACCCTTGATTCCTAAAGTTGATAAAATTTCCTGTAGCTATGCAATTGACCTTTTTCCCCCTTAAAAAACAAGGAAAAACTAAATGCAATTGACCTTTCTGAACAGAAAAAGCTTTTGTGTATGTGAATGTATATAGGCTCTACTGCTTGTAACATTTTATTCTCAGTTTATTGTTCCTGTGGTGCAATGGCATTGCCTTTAGCTATGCTATTGAGAGTATTGGCCTATTCTGAACAGTAATGAAATTTTCATATCTGTACATGTTTATAGCCTCTAGTGTTTGTGTCATTTGAATGTCAATTTGTTGTTAATATACTATTATTTTGTGAGCTGCAGTGAGGTGGACCCAATCGTAGCTTCTTTTTCAGGGGGAGCCGTTGGTGTGATCTCAGCATTAATGGTGGTTGAAATAAACAATGTAAAACAACAAGAGCATAAGAGATGCAAATACTGCCTTGGAACTGGTTGGTATTTTCCTTTTACTATTTCACATTGCTTCTTGCAAATGCCTTATGCTGATCTGTGGTAGACATTTTGTGAGATGCTTCTTTATCTTTTCTGTGTATGTGTGCGCATTTCCTCGAGTCCTGTTAATGGCTGATACAATATTAAATGCTGCCAAAATTCCCGTTTTTGATAGAACAGTTCTGGAATGAATTCAATGTATAATACGTACTGTATACAATTCAGTGTATAATACAAAGCCAAATACATTAATAAGAAAAAGTAATCAAAACCCGCAACAAGAAATTTCAAACCACATCTCTCCGTACCTGCAATACACTGTAAAGAGTACAGTTTATAATGTGGAACAGTTACCGTTATCACGACAATAAGGGGCTGTTTGGTTCAAAGAACTGGAATGGTACGAAATGATATCCCGTACCAAGGAGGTATGGATTGAGAATGCCATGTCTCCGGATGGGTTCTTCTGCATCTTACTCTTAACTGCTAGGTATGGAATTTAAACACTAAAATGAACTTCATAGTTAGATTCTTTTCTATGTAATATGGAGGGATATAAATTTAAAGAGACAAAAATCCCAAGCAATCTTCTCTTTCCCTTATGATAAAATATATGATTTCAAAGGATATAATAAGTTGGGAAATGCAAAGAGACAGTTCTCAGATGAAAATCACAGCAGCAGTGGGAAATTCAACAATTTCCAAATACAGCTAGTGAGTGAAATGTGATAATAATGACTGAAAACCAACAATAGAAAGAAAATATATAAACAAGCCGTACCCAGTGCACAAGGCTCCCGCTAGCGCAGGGGAAGGTCTAAATGTACGCAGCCCTACCTTTGTTTTCATAAAGAAGCTTTTTCTAGAGATCGAACCTGTGACCTAGTAGATAGCAAGTAGACACTTGACCATCTCGCCAAGGCACGATCTTCAGAAAGAAACAAAATATATATCAAGAAGCAAAATCATATTGGCAGTGAGAAATTACCATTGGCTTGTGGGATGTATTTAAAGTAGGAAGGCAGATTCTAAAAGCAACTGGGTTTGAGAGAGGTTCTCCACTCCAGATACGTATGCTGTCTCTTTCTAGAATCCACAAGGGGAGAATACAGTTTTCTTTATTAATAAACTTCACCTATGAGCTTCTAAATTATATCTTGTGTTGGTTGTTTGAATCTTATGATTTCTATTAGAGTATTAGACTTTGTTAGACTTGCTCTCCAGACATATGTAGTGGTGTTTCATCGTGATACATAAAATCATGGCAATGTGCCTAAGTGTTTTTTGTTGGTGATCTTATTGGGCACAAAATAGTTGCCTTGAGCTGATGTAATGTGTCTAAGCCTAGATGCTAGAGGGCTGGGGATCACAGAGGTATTTCGTTTGGCCAAGGCTGGTCTGAGGTTTATGGCAGCTGGAAGGACATTATAGTACTTTCCTGTGCGTGTTCGGCTTAGGAAGTAGGAACCATATTTACAAAGGGAACTATGGATAATGCTTGTTGCAATATTACCTAGAAGACACATGGTGTTTATGCCAAACTTCGTGTAGACGATCTTTGGTTGGGACAGATTAAATCAAGTAAGGTAAATAACAGAAAATAAAGGACGGAAATAAAGAGAGAAGAGACACGAGATGGTGACGCGGAAAACCCGGAAGGGATAACAACTATGGGTGGCAATAAGTCCACCAATCCACTATGTTTATTGGCATAAAAAGCCTAGTTGAGTACAAGTACAATGTATATATGCGAGTATGTAATATAGCTAATGATAATGCTTAAGTAAAAGATAGTACATGATATACGAGGAGAGTGCATATGCGGGTTGGGGTAATATCTTTGTAATATGACAGAAGGTTTATTGTGGAGGGAAAGTGTATTAGAAGAAGATCTTTGGTTTAATGTATATTGGCTACGACTTGGTAGTGGAATGTACATGTGGGGGTCGAAGGATAATCTCATTATTGTTAGTTGCAGCCTTGCAGGGGTTACGGGGAAATGATAGAGGTAGTTTTTATAATTAGCTCTTAAGGAATAGTTCAGAGAGGAATAAGTGGAGCTAGAGGTATATTGTTTTACAGTGTGTATTGGGAGTGTCTTTTATTGTAGGTTGACACAATATATAAAAAGGCGCAAGGCGCAACAAGGCGATAGGGGTCGTGTTACTGGTGCCTAGGCGCAAACATAAGGCGCGCGCCTCATCGGAGTGAGGCGCATATTTATAAAAATTAAATAATCAGTACATAAAGATAAATCAGTTTATTTTTCTTTAAAAAAAATAAATCAATTTATTTTATAAAATAAAATTAAATAATCAGTACATATAGATAAATTAGTTTATTTTAGGCTTTGTTTGGTACAACATTAGCAAAGGAAATGAATGGAAGGGAAAAGAAGGAAAGAGAAAGGAAACTTAATTTATTTTCCGTCGTTTGATTGATGGAAGGAAGGGAGAGGAAAAGAAAGGAAAATCATTTGACAACTTTTAATTTTCCCTTTCCTTCCGAATTCCCCCACTTTTGGGAGGAAAGGAAAATGAATATTTATTAATGATGCTTTTCTTCCATTTTCCTTATTTTCCCATCAAATCCAATTTAATTTTTGGAACCAAACACAAGAACCCGTATTTTTGTTTTCCTTTCTCTTCTTTTCCTTGTGATTCCTTTCTACCAAACAAAGTGTTAGTCCGTAAAAATGATGTTTATGAATCAAAAGATAAATTTGATGAGAGAGAAATAAGGTAGAAGATACAAATAAGCTTTGATGAGAGAGAAAAATGGTAGAAAATAATTATAAAATCTGATGAGGGAGGAGAGGAGAGAATCCTTTCAAAAAAAATAAAAAAGAAGAGGAGAGAAAGAGAGCCTACTTGGCATCAAGCTTTCTTCAAGGAGTGATGATGATGATACTAGGGCTGGCTGAAGACAATTATGTTTCCTTCTTTTTTTTTCTTTTCTTTTTGGACTCTTGGCCCATCATTTCATTCGGGCGCCTTTTCATACACTAGGTTGCTAGTCTTTATATAGTACTAGGTCTAACAATGTTGAGGGGATAATGTTGGTAGTTGCTCCTTATACTCTCAACCGTCTCCTTGATCTTTTCAACTGCTTCTTTGATCTTTGCTAACCGACTTGAGCTTGTCCAACAAGCAACCCACTTTCCCATGATTGGTTTGACTAGTAAGTTGTGGAGATAATGACTCCTCAAATATAGGAAAAAACGACTCCAAGAACGGACTGATTCGTGCTGACTCGTTCCCATGTGAAAGTGAGTTGCTTGTTGGACAAGGTTAAGTCGATTAGCAAAGATCAAGGAAGCAGTTGAGAAGATCAAGGAGACGGTCGAGAGTATCAAGGAGCAACTACCAGCATTATCCCCTTAACAAGTTAACAATGTTAGACCTAGTGCTATATAAAGACTGCCAACCTACAATAAAAGACACTTCCAATACACACGGTAAAACAATATACATCTAGCTCTACTATTTATTCCTCTCTGAACTATTCCCTAAGAGCTAATTATAAACTACCTTCTACCATTTCCCGTAACCCCTATAAATAACAACAATGAGTTATCCTTCAACTTCCACATGTACATTCCACTACCAAGTGCTAGCCTTTATTATTTATACGTAGCCAATATACATTAAACCAATGACCTTCTTCTAATACACATTCCTCCACTATAAACCTTCTACCATATTACAAAGATATTACCCCAACCCGCATATGCACTCTCCTCGTATATCCTGTACTATCTTTTACTTAAGCATTATCATCAATACACTGTACTTGTACTCAACTAGTCTTTTTATGCCAACAACGTAGTGGATTGTTGGACAATTGCCACTCGCGGTTTTATCCCTTCCGGGTTTTCCGCGTCACCATCTCTCGTCCCTCTTTATTTTCTGCTATTTACTTTACTCGATTTAATCTAGTCGTCTATGTCTCAACCAAAGGCCGTCAATGCGAAATTTGGCATAAACACATGGTATTTTCACTTTTAGGTACTCCTTATTTGTTTTGAAGGTTCTCTGTGGCACAACTTGGCACTAAGATTAAGCTTCTTACTGGTATTTTCTTATTAAAGAAGGTTGCTGCTGTGAATGTCAAGCTTATCTCAGAAGTACTAGTTCTTTAGGAGTCATTGTGTGACATCATGGGTTTATCTCTTCTGATCTTAACGGGTCTAGGTTACTGGATTCATCTCCCTATCTCTCTGTATGTCTCTCTGTTGAAGGAGATAAGATTTAGGGAAAGGCTTAAGAGATTTGTTCTAATTATGAAAATAAAGCAATGGAAAAATTTGCTTATAAGGGGGAGAAAAGGTAGCAATCATTTCTGATATTAAGGACCAAGTCTGAAAACATGTGTGCTAAGCTTGGTGACAAAAAATATCTATATGCCACCAAGAAGATAAACCTTTTTTTTTTTTTTCTATCTATGCCATTTGTACTTCAGTTATTTCATGGTTTTCTACAAGGGACTTTGCATATACCAGTATAATTTTATTTCACTACCAATCAATAATCTCATCACAAAATACCCTGCCTTGAATATTTAAAGGAAAACAAACTGTGTTGAAGTTTGTTATTTATAGATTATATTCCGTGTGCTATATGTTCATAATTGCTTTTCAATTGATGTCGGAAGTTCTCATTTCCTATTTATTTTAATATTTTTTATTTTTTCTGTGATCACTTAACGTAGGTTACCTAGCGTGTGCTCGCTGTACAAACACTGGATCTCTGGTTCTTATTGAGCCTGTTGCTACGGTTAATGTCAGTGACCAACCTCTTTCACCGCCAAAGACCGAGAGATGTTCAAATTGTTCGGGTTCTGGAAAGGTTAGATAGATATTGTATGCATATAGGCTACATGAATTCTATGCAACTTTTGAGATCCTTTACTTTTTGTGATATGAGTCTAACTTTGAAATGTGTTGTAGGTCATGTGCCCTACTTGTCTGTGTACAGGGATGGCAATGGCAAGTGAGCATGACCCAAGGATTGATCCCTTTGATTAAAGGTATTGTATCATAAATTAAGTTGTCGATCTGTTTGTATCTATATAGCCGTTTTGTGTTGCAAAAAGTTGTACATATGTTATCTTCTTGACGGTGCTTGCTCTAAGCCATGTACAAGTCCTTATTTATCAAAAGTACAAATGTAATAGTGATACCTTGATTGTACGAAGTATAATGTAAGAGTAGCCACATCACATGTAATGTAACACATTGTACGGATTATTGTATTATCAATTGTATAATTTTTATACAAGAGTATTGTAAGTCATGTATCTCTTAAAAAAGTTTTTGTGAATAATAATGTTGTCATTGCAAACACAACTGAATAGTTACATTTAAAAAAAAAAAATTAAAAATCCAAAGGAAGTTATGATTAGCAAGAAATAGTTTTTCATAACCACCATTATTAGTAATAATAATAATAATGGAGGTCGCTATGCAGACTTGTAA

mRNA sequence

TGAGCAGTAAGGAACACACTCGTCCGTCGCCAATGGACAAACCATAAGTTATAGAAGTGGAACCACCACTAATAACATGAACGAGTGGTGATCGGAGAAACTGGGCGCCACAAAAACATGCTCTGTTCAGGTCGAATTTTGGCGGTTTATCACCCTAAAAACCCCTTAATTTCCTACCACAACTACTCTTCATCTTCATCTTCATCTTCATCTTCATCTTCCAGATTAATTCGCAGAAACCTCCAACTCCCTCCGACATGGCGCTGTTTCTCGTCGTCTATGGCTTCCGAATCCGATCCTTCTCCCTTCCCTTCTGCTTTCCCTGATTCCGGCGAAACTTCCGACAGAACCAGCTCCGCATTTTGTATTATAGAAGGGCCTGAAACAGTTGAGGACTTTGCTAAAATGGAATCGCAAGAAATTCAAGATAATATTCTGAGCCGCCGAAATAAAATCTTCTTGCTTATGGAAGAGGTTCGAAGGCTACGGATACAACAGCGAATCAAAAGAGCTGAGCTGGGAATCTTAAAGGAGGAACAGGAAAATGAACTACCAAGCTTTCCATCTTTTATCCCATTTTTGCCTCCTCTGAGCTCGACGAACCTCAACCAATATTATGCTACCTGTTTCTCTCTTATTGCTGGAATTATGGTTTTTGGCGGTCTTCTAGCACCTGCATTGGAGCTCAAATTGGGATTGGGGGGAACATCATATGAAGATTTCATCCAGAGTATGCATTTGCCAATGCAGTTGAGTGAGGTGGACCCAATCGTAGCTTCTTTTTCAGGGGGAGCCGTTGGTGTGATCTCAGCATTAATGGTGGTTGAAATAAACAATGTAAAACAACAAGAGCATAAGAGATGCAAATACTGCCTTGGAACTGGTTACCTAGCGTGTGCTCGCTGTACAAACACTGGATCTCTGGTTCTTATTGAGCCTGTTGCTACGGTTAATGTCAGTGACCAACCTCTTTCACCGCCAAAGACCGAGAGATGTTCAAATTGTTCGGGTTCTGGAAAGGGATGGCAATGGCAAGTGAGCATGACCCAAGGATTGATCCCTTTGATTAAAGACTTGTAA

Coding sequence (CDS)

ATGCTCTGTTCAGGTCGAATTTTGGCGGTTTATCACCCTAAAAACCCCTTAATTTCCTACCACAACTACTCTTCATCTTCATCTTCATCTTCATCTTCATCTTCCAGATTAATTCGCAGAAACCTCCAACTCCCTCCGACATGGCGCTGTTTCTCGTCGTCTATGGCTTCCGAATCCGATCCTTCTCCCTTCCCTTCTGCTTTCCCTGATTCCGGCGAAACTTCCGACAGAACCAGCTCCGCATTTTGTATTATAGAAGGGCCTGAAACAGTTGAGGACTTTGCTAAAATGGAATCGCAAGAAATTCAAGATAATATTCTGAGCCGCCGAAATAAAATCTTCTTGCTTATGGAAGAGGTTCGAAGGCTACGGATACAACAGCGAATCAAAAGAGCTGAGCTGGGAATCTTAAAGGAGGAACAGGAAAATGAACTACCAAGCTTTCCATCTTTTATCCCATTTTTGCCTCCTCTGAGCTCGACGAACCTCAACCAATATTATGCTACCTGTTTCTCTCTTATTGCTGGAATTATGGTTTTTGGCGGTCTTCTAGCACCTGCATTGGAGCTCAAATTGGGATTGGGGGGAACATCATATGAAGATTTCATCCAGAGTATGCATTTGCCAATGCAGTTGAGTGAGGTGGACCCAATCGTAGCTTCTTTTTCAGGGGGAGCCGTTGGTGTGATCTCAGCATTAATGGTGGTTGAAATAAACAATGTAAAACAACAAGAGCATAAGAGATGCAAATACTGCCTTGGAACTGGTTACCTAGCGTGTGCTCGCTGTACAAACACTGGATCTCTGGTTCTTATTGAGCCTGTTGCTACGGTTAATGTCAGTGACCAACCTCTTTCACCGCCAAAGACCGAGAGATGTTCAAATTGTTCGGGTTCTGGAAAGGGATGGCAATGGCAAGTGAGCATGACCCAAGGATTGATCCCTTTGATTAAAGACTTGTAA

Protein sequence

MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESDPSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEVRRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVFGGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSGKGWQWQVSMTQGLIPLIKDL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo25853	Spo25853	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo25853.1	Spo25853.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25853.1.utr5p.1	Spo25853.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25853.1.CDS.9	Spo25853.1.CDS.9	CDS
Spo25853.1.CDS.8	Spo25853.1.CDS.8	CDS
Spo25853.1.CDS.7	Spo25853.1.CDS.7	CDS
Spo25853.1.CDS.6	Spo25853.1.CDS.6	CDS
Spo25853.1.CDS.5	Spo25853.1.CDS.5	CDS
Spo25853.1.CDS.4	Spo25853.1.CDS.4	CDS
Spo25853.1.CDS.3	Spo25853.1.CDS.3	CDS
Spo25853.1.CDS.2	Spo25853.1.CDS.2	CDS
Spo25853.1.CDS.1	Spo25853.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo25853.1.exon.9	Spo25853.1.exon.9	exon
Spo25853.1.exon.8	Spo25853.1.exon.8	exon
Spo25853.1.exon.7	Spo25853.1.exon.7	exon
Spo25853.1.exon.6	Spo25853.1.exon.6	exon
Spo25853.1.exon.5	Spo25853.1.exon.5	exon
Spo25853.1.exon.4	Spo25853.1.exon.4	exon
Spo25853.1.exon.3	Spo25853.1.exon.3	exon
Spo25853.1.exon.2	Spo25853.1.exon.2	exon
Spo25853.1.exon.1	Spo25853.1.exon.1	exon

Homology

[Close]

BLAST of Spo25853.1 vs. NCBI nr
Match: gi|902238838|gb|KNA25349.1| (hypothetical protein SOVF_007430 [Spinacia oleracea])

HSP 1 Score: 569.7 bits (1467), Expect = 3.200e-159
Identity = 294/301 (97.67%), Postives = 294/301 (97.67%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           MLCSGRILAVY PKNPLISYHNYSS      SSSSRLIRRNLQLPPTWRCFSSSMASESD
Sbjct: 1   MLCSGRILAVYQPKNPLISYHNYSS------SSSSRLIRRNLQLPPTWRCFSSSMASESD 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
           PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV
Sbjct: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF
Sbjct: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN
Sbjct: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 295

Query: 301 K 302
           K
Sbjct: 301 K 295

[Close]

BLAST of Spo25853.1 vs. NCBI nr
Match: gi|731363347|ref|XP_010693386.1| (PREDICTED: uncharacterized protein LOC104906344 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 466.5 bits (1199), Expect = 3.800e-128
Identity = 241/301 (80.07%), Postives = 261/301 (86.71%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           MLCSGRILAV H   PLI YHNY+ SSS       R+  R L  PP WRC SSSMA ESD
Sbjct: 1   MLCSGRILAVSHSAKPLIFYHNYAPSSS-------RVSGRKLNDPPKWRCMSSSMAPESD 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
            + FPS+     ++SD++++AFCIIEGPETV+DF KME QEIQDNI SRRNKIFL MEEV
Sbjct: 61  SASFPSS--SDSDSSDKSNTAFCIIEGPETVQDFDKMEMQEIQDNIRSRRNKIFLHMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIK AELGIL+EEQENELPSFPSFIPFLPPLSS NL QYYATCFSLIAGIM+F
Sbjct: 121 RRLRIQQRIKSAELGILQEEQENELPSFPSFIPFLPPLSSANLKQYYATCFSLIAGIMIF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAP LELKLG+GGTSY DFIQSMHLPMQLS+VDPIVASF+GGAVGVISALMVVEINN
Sbjct: 181 GGLLAPTLELKLGVGGTSYADFIQSMHLPMQLSQVDPIVASFAGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARC+NTG LVL+EPV+T+N  DQPLSPPKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCSNTGYLVLVEPVSTINGGDQPLSPPKTERCSNCSGSG 292

Query: 301 K 302
           K
Sbjct: 301 K 292

[Close]

BLAST of Spo25853.1 vs. NCBI nr
Match: gi|225454961|ref|XP_002280630.1| (PREDICTED: uncharacterized protein LOC100266582 [Vitis vinifera])

HSP 1 Score: 421.4 bits (1082), Expect = 1.400e-114
Identity = 227/302 (75.17%), Postives = 255/302 (84.44%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYH-NYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASES 60
           M+C+GRILAV +  +P  S+H NY  S+S       R ++ NL+    WR    SMASE 
Sbjct: 1   MVCTGRILAVSY--SPTTSFHRNYRYSNS-------RFLQGNLKSNLKWR----SMASEP 60

Query: 61  DPSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEE 120
           + S F S+     ++SD+ S+ FCIIEGPETV+DFAKME QEIQDNI SRRNKIFL MEE
Sbjct: 61  EASSFASSV--DSDSSDKNSTGFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHMEE 120

Query: 121 VRRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMV 180
           VRRLRIQQRIK AELGILKEEQENELP+FPSFIPFLPPLSS NL  YYATCFSLIAGI++
Sbjct: 121 VRRLRIQQRIKSAELGILKEEQENELPNFPSFIPFLPPLSSANLKLYYATCFSLIAGIII 180

Query: 181 FGGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEIN 240
           FGGLLAP LELKLGLGGTSYEDFI+S+HLPMQLS+VDPIVASFSGGAVGVISALMVVEIN
Sbjct: 181 FGGLLAPTLELKLGLGGTSYEDFIRSVHLPMQLSQVDPIVASFSGGAVGVISALMVVEIN 240

Query: 241 NVKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGS 300
           NVKQQE+KRCKYCLGTGYLACARC++TG+LVLIEPV+TVN   QPLSPPKTERCSNCSG+
Sbjct: 241 NVKQQENKRCKYCLGTGYLACARCSSTGALVLIEPVSTVNSGSQPLSPPKTERCSNCSGA 287

Query: 301 GK 302
           GK
Sbjct: 301 GK 287

[Close]

BLAST of Spo25853.1 vs. NCBI nr
Match: gi|590671084|ref|XP_007038236.1| (Orange protein isoform 2, partial [Theobroma cacao])

HSP 1 Score: 416.4 bits (1069), Expect = 4.600e-113
Identity = 229/327 (70.03%), Postives = 252/327 (77.06%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           M+C  R+LAV +   P   Y+         S  SS L+    +L   WR    SMA+E +
Sbjct: 1   MVCLSRVLAVSYTVKPSRPYNR--------SCFSSELVHATPKLNTRWR----SMATEPE 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
            S F  +  DS  T+      FCIIEGPETV+DFAKME QEIQDNI SRRNKIFL MEEV
Sbjct: 61  SSSFAPSI-DSESTA-----GFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIK AELGILKEE ENELP+FPSFIPFLPPL+S NL  YYATCFSLIAG ++F
Sbjct: 121 RRLRIQQRIKSAELGILKEETENELPNFPSFIPFLPPLTSDNLKVYYATCFSLIAGTIIF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAP LELKLGLGGTSY DFI+SMHLPMQLS+VDPIVASFSGGAVGVISALMVVEINN
Sbjct: 181 GGLLAPTLELKLGLGGTSYADFIRSMHLPMQLSQVDPIVASFSGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARC+NTGSLVLIEPV+TVN  D+PLS PKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDRPLSAPKTERCSNCSGSG 300

Query: 301 KG---------WQWQVSMTQGLIPLIK 319
           +          WQWQ +MTQ L  LI+
Sbjct: 301 RSCAPHAFALEWQWQANMTQELTHLIR 309

[Close]

BLAST of Spo25853.1 vs. NCBI nr
Match: gi|747075455|ref|XP_011084764.1| (PREDICTED: uncharacterized protein LOC105166943 [Sesamum indicum])

HSP 1 Score: 414.5 bits (1064), Expect = 1.700e-112
Identity = 224/301 (74.42%), Postives = 248/301 (82.39%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           MLCS RIL + H   P  S            S S   +R  L+    WR    SMAS++D
Sbjct: 1   MLCS-RILTISHLPAPCYS------------SESRGYLRGKLKSNLKWR----SMASDAD 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
            S F +A  DS  ++DR S+AFCIIEGPETV+DFAKME QEIQDNI SRRNKIFL MEEV
Sbjct: 61  ASSF-AASVDSDSSADRNSAAFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIK AELGI+ EEQENELP+FPSFIPFLPPL+S+NL +YYA CFSLIAG+M+F
Sbjct: 121 RRLRIQQRIKSAELGIINEEQENELPNFPSFIPFLPPLNSSNLKEYYAMCFSLIAGVMLF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAP LELKLGLGGTSY DFI+S+HLPMQLS+VDPIVASFSGGAVGVISALMVVEINN
Sbjct: 181 GGLLAPTLELKLGLGGTSYADFIRSVHLPMQLSQVDPIVASFSGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARC++TGSLVLIEPV+T+N  DQPLSPPKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCSSTGSLVLIEPVSTLNSGDQPLSPPKTERCSNCSGSG 283

Query: 301 K 302
           K
Sbjct: 301 K 283

[Close]

BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2D2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_007430 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 2.200e-159
Identity = 294/301 (97.67%), Postives = 294/301 (97.67%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           MLCSGRILAVY PKNPLISYHNYSS      SSSSRLIRRNLQLPPTWRCFSSSMASESD
Sbjct: 1   MLCSGRILAVYQPKNPLISYHNYSS------SSSSRLIRRNLQLPPTWRCFSSSMASESD 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
           PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV
Sbjct: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF
Sbjct: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN
Sbjct: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 295

Query: 301 K 302
           K
Sbjct: 301 K 295

[Close]

BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BGE8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g047550 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.700e-128
Identity = 241/301 (80.07%), Postives = 261/301 (86.71%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           MLCSGRILAV H   PLI YHNY+ SSS       R+  R L  PP WRC SSSMA ESD
Sbjct: 1   MLCSGRILAVSHSAKPLIFYHNYAPSSS-------RVSGRKLNDPPKWRCMSSSMAPESD 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
            + FPS+     ++SD++++AFCIIEGPETV+DF KME QEIQDNI SRRNKIFL MEEV
Sbjct: 61  SASFPSS--SDSDSSDKSNTAFCIIEGPETVQDFDKMEMQEIQDNIRSRRNKIFLHMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIK AELGIL+EEQENELPSFPSFIPFLPPLSS NL QYYATCFSLIAGIM+F
Sbjct: 121 RRLRIQQRIKSAELGILQEEQENELPSFPSFIPFLPPLSSANLKQYYATCFSLIAGIMIF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAP LELKLG+GGTSY DFIQSMHLPMQLS+VDPIVASF+GGAVGVISALMVVEINN
Sbjct: 181 GGLLAPTLELKLGVGGTSYADFIQSMHLPMQLSQVDPIVASFAGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARC+NTG LVL+EPV+T+N  DQPLSPPKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCSNTGYLVLVEPVSTINGGDQPLSPPKTERCSNCSGSG 292

Query: 301 K 302
           K
Sbjct: 301 K 292

[Close]

BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
Match: A0A061G0N0_THECC (Orange protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_014816 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.200e-113
Identity = 229/327 (70.03%), Postives = 252/327 (77.06%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           M+C  R+LAV +   P   Y+         S  SS L+    +L   WR    SMA+E +
Sbjct: 1   MVCLSRVLAVSYTVKPSRPYNR--------SCFSSELVHATPKLNTRWR----SMATEPE 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
            S F  +  DS  T+      FCIIEGPETV+DFAKME QEIQDNI SRRNKIFL MEEV
Sbjct: 61  SSSFAPSI-DSESTA-----GFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLHMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIK AELGILKEE ENELP+FPSFIPFLPPL+S NL  YYATCFSLIAG ++F
Sbjct: 121 RRLRIQQRIKSAELGILKEETENELPNFPSFIPFLPPLTSDNLKVYYATCFSLIAGTIIF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAP LELKLGLGGTSY DFI+SMHLPMQLS+VDPIVASFSGGAVGVISALMVVEINN
Sbjct: 181 GGLLAPTLELKLGLGGTSYADFIRSMHLPMQLSQVDPIVASFSGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQEHKRCKYCLGTGYLACARC+NTGSLVLIEPV+TVN  D+PLS PKTERCSNCSGSG
Sbjct: 241 VKQQEHKRCKYCLGTGYLACARCSNTGSLVLIEPVSTVNGGDRPLSAPKTERCSNCSGSG 300

Query: 301 KG---------WQWQVSMTQGLIPLIK 319
           +          WQWQ +MTQ L  LI+
Sbjct: 301 RSCAPHAFALEWQWQANMTQELTHLIR 309

[Close]

BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
Match: A0A059DKH2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02931 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.700e-112
Identity = 222/302 (73.51%), Postives = 250/302 (82.78%), Query Frame = 1


		  
Query: 1   MLCSGRILAV-YHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASES 60
           M+CSGR+LAV + P  PL           SS   +SR+ R        WR    SMA++ 
Sbjct: 1   MICSGRLLAVSFPPAKPLCF------CPCSSPFPTSRVRRLKPGFSSRWR----SMATDP 60

Query: 61  DPSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEE 120
           + S F  A P   ++ D+T++ FCIIEGPETV+DFAKME QEIQDNI SRRNKIFL MEE
Sbjct: 61  ESSSF--APPVDSDSPDKTAAGFCIIEGPETVQDFAKMEMQEIQDNIRSRRNKIFLHMEE 120

Query: 121 VRRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMV 180
           VRRLRIQQRIK AELG+LK+EQENELP+FPSFIPFLPPL+S NL QYYATCFSLIAGI++
Sbjct: 121 VRRLRIQQRIKSAELGVLKDEQENELPNFPSFIPFLPPLTSANLKQYYATCFSLIAGIII 180

Query: 181 FGGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEIN 240
           FGGLLAP LELKLG+GGTSYEDFIQSMHLPMQLS+VDPIVASFSGGAVGVISALMVVEIN
Sbjct: 181 FGGLLAPILELKLGIGGTSYEDFIQSMHLPMQLSQVDPIVASFSGGAVGVISALMVVEIN 240

Query: 241 NVKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGS 300
           NVKQQE KRCKYCLGTGYLACARC++TG+LVLIEPV++ N SDQPLSPP+TERCSNCSGS
Sbjct: 241 NVKQQEDKRCKYCLGTGYLACARCSSTGALVLIEPVSSFNGSDQPLSPPRTERCSNCSGS 290

Query: 301 GK 302
           GK
Sbjct: 301 GK 290

[Close]

BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
Match: A0A068VJV1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00013780001 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 3.500e-112
Identity = 218/301 (72.43%), Postives = 245/301 (81.40%), Query Frame = 1


		  
Query: 1   MLCSGRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESD 60
           MLC+GRILA  + + P + Y   S ++++    S R     L+    WRC     AS+SD
Sbjct: 1   MLCTGRILAASNSRTPCLPY---SVTTTTPFMLSGRYSPGKLKPNLKWRC----TASDSD 60

Query: 61  PSPFPSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEV 120
            S F  +       SD  ++ FCIIEGPETV+DFAKME QEIQDNI SRRNKIFL MEEV
Sbjct: 61  ASSFAPSIDSESSASDTNAAGFCIIEGPETVQDFAKMELQEIQDNIRSRRNKIFLQMEEV 120

Query: 121 RRLRIQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVF 180
           RRLRIQQRIK AELGILKEEQE ELP+FPSFIPFLPPL+S+NL  YYA+CFSLIAGIM+F
Sbjct: 121 RRLRIQQRIKSAELGILKEEQETELPNFPSFIPFLPPLNSSNLRLYYASCFSLIAGIMIF 180

Query: 181 GGLLAPALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINN 240
           GGLLAP LELKLGLGGTSY DFI+SMHLPMQLS+VDPIVASFSGGAVGVISALMVVEINN
Sbjct: 181 GGLLAPTLELKLGLGGTSYADFIRSMHLPMQLSQVDPIVASFSGGAVGVISALMVVEINN 240

Query: 241 VKQQEHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSG 300
           VKQQE KRCKYCLGTGYLACARC++TG+LVLIEPV+T+N  DQPLSPPKTERC NCSG+G
Sbjct: 241 VKQQEDKRCKYCLGTGYLACARCSSTGALVLIEPVSTLNAGDQPLSPPKTERCPNCSGAG 294

Query: 301 K 302
           K
Sbjct: 301 K 294

[Close]

BLAST of Spo25853.1 vs. TAIR (Arabidopsis)
Match: AT5G61670.1 (Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons.)

HSP 1 Score: 379.0 bits (972), Expect = 2.800e-105
Identity = 204/297 (68.69%), Postives = 236/297 (79.46%), Query Frame = 1


		  
Query: 5   GRILAVYHPKNPLISYHNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESDPSPF 64
           GRIL+V +P +P      +S    SSS   +R +R        WR       +  DP   
Sbjct: 5   GRILSVSYPPDPYT--WRFSQYKLSSSLGRNRRLR--------WRF------TALDPE-- 64

Query: 65  PSAFPDSGETSDRTSSAFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEVRRLR 124
            S+  DS  ++D+ +S FCIIEGPETV+DFAKM+ QEIQDNI SRRNKIFL MEEVRRLR
Sbjct: 65  -SSSLDSESSADKFASGFCIIEGPETVQDFAKMQLQEIQDNIRSRRNKIFLHMEEVRRLR 124

Query: 125 IQQRIKRAELGILKEEQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVFGGLL 184
           IQQRIK  ELGI+ EEQE+ELP+FPSFIPFLPPL++ NL  YYATCFSLIAGI++FGGLL
Sbjct: 125 IQQRIKNTELGIINEEQEHELPNFPSFIPFLPPLTAANLKVYYATCFSLIAGIILFGGLL 184

Query: 185 APALELKLGLGGTSYEDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQ 244
           AP LELKLG+GGTSY DFIQS+HLPMQLS+VDPIVASFSGGAVGVISALMVVE+NNVKQQ
Sbjct: 185 APTLELKLGIGGTSYADFIQSLHLPMQLSQVDPIVASFSGGAVGVISALMVVEVNNVKQQ 244

Query: 245 EHKRCKYCLGTGYLACARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSGK 302
           EHKRCKYCLGTGYLACARC++TG+LVL EPV+ +   +  LSPPKTERCSNCSG+GK
Sbjct: 245 EHKRCKYCLGTGYLACARCSSTGALVLTEPVSAIAGGNHSLSPPKTERCSNCSGAGK 282

[Close]

BLAST of Spo25853.1 vs. TAIR (Arabidopsis)
Match: AT5G06130.2 (chaperone protein dnaJ-related)

HSP 1 Score: 281.6 bits (719), Expect = 6.200e-76
Identity = 158/282 (56.03%), Postives = 199/282 (70.57%), Query Frame = 1


		  
Query: 21  HNYSSSSSSSSSSSSRLIRRNLQLPPTWRCFSSSMASESDPSPFPSAFPDSGETSDRTSS 80
           H+   SS S+S S  R     L+  P+     SS +  S      +  P SG+T     +
Sbjct: 12  HHLLLSSPSTSKSLLRFPSSYLKPSPSLLFHGSSRSLLSCSDGSNNRPPPSGDT---VPN 71

Query: 81  AFCIIEGPETVEDFAKMESQEIQDNILSRRNKIFLLMEEVRRLRIQQRIKRAE-LGILKE 140
            FCIIEG ETV+DF +M+ QEIQDNI SRRNKIFLLMEEVRRLR+QQRIK  + +    E
Sbjct: 72  NFCIIEGSETVQDFVQMQLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKSVKAINEDSE 131

Query: 141 EQENELPSFPSFIPFLPPLSSTNLNQYYATCFSLIAGIMVFGGLLAPALELKLGLGGTSY 200
            +  E+P   S IPFLP ++   L Q Y+T  +LI+GI+ FGGL+AP LELK+GLGGTSY
Sbjct: 132 LEATEMPEITSSIPFLPNVTPKTLKQLYSTSVALISGIIFFGGLIAPNLELKVGLGGTSY 191

Query: 201 EDFIQSMHLPMQLSEVDPIVASFSGGAVGVISALMVVEINNVKQQEHKRCKYCLGTGYLA 260
           EDFI+S+HLP+QLS+VDPIVASFSGGAVGVIS LM++E+NNVKQQE KRCKYCLGTGYL 
Sbjct: 192 EDFIRSLHLPLQLSQVDPIVASFSGGAVGVISTLMLIEVNNVKQQEKKRCKYCLGTGYLP 251

Query: 261 CARCTNTGSLVLIEPVATVNVSDQPLSPPKTERCSNCSGSGK 302
           CARC+ +G  + I+P+     ++Q +    T+RC NCSG+GK
Sbjct: 252 CARCSASGVCLSIDPITRPRATNQLMQVATTKRCLNCSGAGK 290

The following BLAST results are available for this feature:

BLAST of Spo25853.1 vs. NCBI nr
BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
BLAST of Spo25853.1 vs. ExPASy Swiss-Prot
BLAST of Spo25853.1 vs. TAIR (Arabidopsis)

BLAST of Spo25853.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238838\|gb\|KNA25349.1\|	3.2e-159	97.6	hypothetical protein SOVF_0074...	[more]
gi\|731363347\|ref\|XP_010693386.1\|	3.8e-128	80.0	PREDICTED: uncharacterized pro...	[more]
gi\|225454961\|ref\|XP_002280630.1\|	1.4e-114	75.1	PREDICTED: uncharacterized pro...	[more]
gi\|590671084\|ref\|XP_007038236.1\|	4.6e-113	70.0	Orange protein isoform 2, part...	[more]
gi\|747075455\|ref\|XP_011084764.1\|	1.7e-112	74.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo25853.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S2D2_SPIOL	2.2e-159	97.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8BGE8_BETVU	2.7e-128	80.0	Uncharacterized protein OS=Bet...	[more]
A0A061G0N0_THECC	3.2e-113	70.0	Orange protein isoform 2 (Frag...	[more]
A0A059DKH2_EUCGR	2.7e-112	73.5	Uncharacterized protein OS=Euc...	[more]
A0A068VJV1_COFCA	3.5e-112	72.4	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo25853.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo25853.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G61670.1	2.8e-105	68.6	Encodes a close homolog of the...	[more]
AT5G06130.2	6.2e-76	56.0	chaperone protein dnaJ-related	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15852	FAMILY NOT NAMED	coord: 52..301 score: 3.3E
None	No IPR available	PANTHER	PTHR15852:SF24	SUBFAMILY NOT NAMED	coord: 52..301 score: 3.3E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding