Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGTGAAACATGAAAAGTCGTCAGATGACAAAATCGATATTAATTTCTAATGACGTCTAATTATTATATTGACTGTCCTAAAACTAAACTCATAATACAAGAGAACTTTCATAGTGTTGTTATTAGCAAAGGAGGATCGATCGAGGATGGGAGTCGGAGAGGAGACTACTACGACGGTGGCTAACCTTCCCATTATCGACTTATCGGCGCCTGATCGAGAATCCACGGCTGCAACACTTCGCCAGGTAGATTCGATCTATATATATCTGTCTCAAATTAGTTTTTACACTTTTATGATATAATCTCGATCTACTGATATATTTTGCTTCTAACTTAAATTAAATTACTTTTACGTATTAAAAATGTAACACCCTTTTGGTATTTGTGATTATAATATAATATAGGCATGCATTGACTTCGGTTTCTTCTACATTGTGAACCATGGAGTGGACAAGGATCTGTTTGGGAGATTGTTTGAGGAGAGTCAAAAGTTCTTTACACTTCCTTTGGATGATAAAATGAAAATAGCTCGCAAAGGAATTCGTGGATATACTCCTTTATATCACGAGAAGTTGGATACCGCTACCTCTACCAAAGGTTTTTCTACCTCTAAAACTATATAGCTCTTTTTACCGCTATTTTTTACTCCTTCCGTCCCGGAATATTTGAACCGATTTAACCGACACAGAGTTTAGTACAAAGTAATTGGCTTATTATTTAATGAGATTGTAGTTGATAGTGTTGTATTTTTTAATATAGATAGGAATATGTGACAACTTTTTAAAGGGGTTAAAGAGTAGGGGGAGGGTGCATGAGACCACAAAATGACATGTGAAAGAGGTAGTTGATATAATATTTATAAAAATTTACCATTTATAGAAGTAATCTGAAAAGGCTTTATAAGGAAAACTGTGCAAGTAGTCCGGGACGGAGGGAATATTTATTTATTGGTATAAAAGTTTTACGTGGTAGATAAACTTGGAATCGAATCGTGTACATGTTACTGTGAAAGTGTGAATAACAATTGTGCTGCAAATTTGAAGGGAGTTTTTTGATGTTAGGTGATTCTAAGGAGTTTTTGGACATTGGGCCGCTTCATGATGAAGTTAGAGATTCGAACCAGTGGCCTTCTGAAGGTAAGAAAACAAAGACATAAAGGAAGGAATAGTCTCCTAAATAAGACGCGCTGACGTGGTAAAGCCACCCCTCTAATTTCCTCATCAAAATATATATGTACAAACAAATTAAGCCAAATGGAATAATATTTAAAATGGTGAGGGACTACTCTAGAATCTAGATTCATCTAAAAGTCAAGTTGATTTTGGCATATAGTATGGACAATCTGTCCATCTCTGCCTCAATTTAGTTGCGACAAAATTTTTGTACGATAATGGTCCACATAAACTTAATTATGTGTAAGATTAGGGTGTTTATCTTTATCTAAGGGGTGCCTATACTTTTTTTGCATAATTTTTTATTGTTCTGCGAGCAATAAAAAAAGAGTGAAAATTAGTTTAAATAACAATATCAATGTGACAACTAATGTTAAAGCAAAAATAAACTATTATAGGATAAAACCTTAAGTATATAATTCTTAGTTTCAAAGTTAAAAAAATGTTAAAGCAAAAATCGGGAACAATATCAACGTGACAACTAATGTTAAAGCAAAAATAGTGAAAATTAGTTAAAAATAACAATATCAACGTGACAACTAATGTTAAAGCATACATCCAATGTACTTTAGGATTTAATATAAGAATTTGATTAGAATTCGGATACTAATTAATTTCTTTAATCATCTACTGATGATTGTGGCATTCCAGAGCTTCTTCCAAACTGGAAAACAACCGTGGAAGCATACCATGATAAAATCATGTAAGTTATGAAGTACTAAATTTTCATTGCCTTATTTGTTCGCTTTCCTTGCATATCAATATTAGTGGTCGCTTTGTCTAATTACCGCTTACTACCTCCGTTGTATAATGTTTTTTACGGTTATTAACTTATTATTTGCACAAATATTAAGGAAAAAAGAGAAGCTATAGTGTTTAAAAATGTGGGTGAATGAAATAAAATATGAATAAAATAAGTGAGGGAGAGTATAAGGTGGGTGGAGAAAAAATGAATAAAATTAGAGAAAGTGAGTGAAAAGTGATAAATGTTGTGGAGGTAATAGGGGTAAGATAGTAAAGTTTCATGTCAAGAAATAGAATAAAACACAATGTAAGAACAATAAGAATAGATTAAAACAGAAAGCGCGCGTAAAGATCATTTTAAAACGGAGGTAGTATTTGTTAAGATAATTTTGGTGTTAGGCAAGGGCAGATTCTGAACAGTTTTACGAGGGGGGTCGGATTGGCCGGTAGAAAAAAAATTAAGCAATATACTATGTAATAATACAACTATATACAAATTTAGGGGGCTGTAACTTAAAATACACTATAAAATTTTCCGGCCGAGGGAGGGGGGAGAAGTCCCACCACAACACCAACTAAGATCTGCCATTGCCCATTGGTGCTAGGGTGTGTTCTATTTAGCTGATTTTCACTTATTTTCTGAACTTGTCAAAATTTATTTTAGTTATAAATTGTACTCCTTAATAACTTGGTCAACTTTTATTTCTCCTAAACTTATTTTATCTGATTAAACTTATTTTTCCCGAGATAAGTAAAAATAGGGTGAACATAAGAAAACCTTGGTCATATCGTGATATTTAGTTTGTTTTAAATACTCTCAATGTAAGTATGTAACACAAAGTGTGGTGCCTTAATTAGGAAAGCTGGAAAAAGATTATATTCACTTCTTGCTGTGGCCTTAAACCTAAGTGAGAACTATTTCGAAGACATTGGAGCTTTGGATCCACCAATGCCTTTCATTCGCCTCTTACGTTACCCAGGTTAGCTAGCTGTAACGAAACATGATACTACGTATATAATTATATATGTATAGGGGACTTGAGCTGTTATATTTTGGATTTGCTTAATTGGCTGTAATTAGTGTTTGATTAAACATGTTTAGGGGACCTCAGTTACTACACTAATGAAGTTCTAGGTGCTTCTGCTCATTGTGATTATGGAATGATGACCCTATTAGCGACTGATGGTGTTGCTGGACTACAGGTACACCTATGCATATATATGTTACAATTAATATGTTAGTTACATTTCCTAATTGTTATTGTAAACTGTAAGGTTACATAATTAATCTACCATGTTTCCTCAGGTTTGCCGGGAAAAAGATCGTCAGCCACGTATTTGGGAGGATGTTCTTCATATTGAGGGGTGAGTCATCCTACATATATTAGATCTGCCTGATCATGAAGCTTTTCAAATTAAGCCTGAACTATGGACACATGTCCATGATGATCTAAATTGCGCTCTTGTACGTGATTATTGACAAGTTTGTTACATTTGCAGGGCCTTAGTTGTCAACATTGGGGACCTTACTGAGAGGTGGACGAATAACGTGTTTAGGTAAATGTTTAATTAATTAACGGGCATTCTACTTATTGTCAGTTATGAAACCCTAATTTTGAATGACAATGATGTACTGTATCAAGAACTACGGATCGAATCAATCGTTTTACATCATTACCGTTTGTAACTCAGTACCCTAATTGCTTTAATATAAACATGCATGTCAAAAGATATCGTGTTTTTCGCCTTAAATAAGTCTGCTGGTTTATGACAGGTCAACATTGCATAGAGTGGTGCCAACAGGACAAGAACGTTACTCAGTACGTAATTTATAGTTTTATTCCTTTTGCTTCTCATATATCCTTCGTTTCTTTTGTTGTTCAACTTACTATATATACTTCGTCGATCTATTTGTTCCCTTTATCTCTAAAGAATTTGTTACTTTGTGTATTGATTTACTAGTTGAATGATGAAGTGATAGAACTATTAAATTGTCCTGCAGGTGGCTTTCTATCTTGACCCATCGCATGATCTTATGGTGGAGTGCTTAGAAACTTGTTGCAGCGAATCAAATCCTCCAAGGTGATCTTTTTTAAGTGCACGTACCCTCTCACATTTTCCCCTCACGTTATAGGTTCTACTTTAAATGTGTATTATCTAATCAAGACCTCTTCTCTGTTCGATTGCAGATTTCCTCCATTCCGTTATATTGACTACCTTTTAGAACGTTTTGAGGGCACATTTGAAGCTTGAATTCAAGTTATATATACGGATTAGTAAATAAGTATGAAGTATCATGTAAACTTGTAAAGCCCTATAATTTAAAAGGCTGAATTATATTATGTTAAGGGCTTTGGTATAAGGTTATGTATAGACTTACCCTTGTCAGCTTTGATGGTAAGGGCAGCTTCATCTCTTGTTAATTCGTCTTATGTTAAATACTTTATTCGTTCCTTAAATATTGCACCATTTTAACTTTTATA ACGTGAAACATGAAAAGTCGTCAGATGACAAAATCGATATTAATTTCTAATGACGTCTAATTATTATATTGACTGTCCTAAAACTAAACTCATAATACAAGAGAACTTTCATAGTGTTGTTATTAGCAAAGGAGGATCGATCGAGGATGGGAGTCGGAGAGGAGACTACTACGACGGTGGCTAACCTTCCCATTATCGACTTATCGGCGCCTGATCGAGAATCCACGGCTGCAACACTTCGCCAGGCATGCATTGACTTCGGTTTCTTCTACATTGTGAACCATGGAGTGGACAAGGATCTGTTTGGGAGATTGTTTGAGGAGAGTCAAAAGTTCTTTACACTTCCTTTGGATGATAAAATGAAAATAGCTCGCAAAGGAATTCGTGGATATACTCCTTTATATCACGAGAAGTTGGATACCGCTACCTCTACCAAAGGTGATTCTAAGGAGTTTTTGGACATTGGGCCGCTTCATGATGAAGTTAGAGATTCGAACCAGTGGCCTTCTGAAGAGCTTCTTCCAAACTGGAAAACAACCGTGGAAGCATACCATGATAAAATCATGAAAGCTGGAAAAAGATTATATTCACTTCTTGCTGTGGCCTTAAACCTAAGTGAGAACTATTTCGAAGACATTGGAGCTTTGGATCCACCAATGCCTTTCATTCGCCTCTTACGTTACCCAGGGGACCTCAGTTACTACACTAATGAAGTTCTAGGTGCTTCTGCTCATTGTGATTATGGAATGATGACCCTATTAGCGACTGATGGTGTTGCTGGACTACAGGTTTGCCGGGAAAAAGATCGTCAGCCACGTATTTGGGAGGATGTTCTTCATATTGAGGGGGCCTTAGTTGTCAACATTGGGGACCTTACTGAGAGGTGGACGAATAACGTGTTTAGGTCAACATTGCATAGAGTGGTGCCAACAGGACAAGAACGTTACTCAGTGGCTTTCTATCTTGACCCATCGCATGATCTTATGGTGGAGTGCTTAGAAACTTGTTGCAGCGAATCAAATCCTCCAAGATTTCCTCCATTCCGTTATATTGACTACCTTTTAGAACGTTTTGAGGGCACATTTGAAGCTTGAATTCAAGTTATATATACGGATTAGTAAATAAGTATGAAGTATCATGTAAACTTGTAAAGCCCTATAATTTAAAAGGCTGAATTATATTATGTTAAGGGCTTTGGTATAAGGTTATGTATAGACTTACCCTTGTCAGCTTTGATGGTAAGGGCAGCTTCATCTCTTGTTAATTCGTCTTATGTTAAATACTTTATTCGTTCCTTAAATATTGCACCATTTTAACTTTTATA ATGGGAGTCGGAGAGGAGACTACTACGACGGTGGCTAACCTTCCCATTATCGACTTATCGGCGCCTGATCGAGAATCCACGGCTGCAACACTTCGCCAGGCATGCATTGACTTCGGTTTCTTCTACATTGTGAACCATGGAGTGGACAAGGATCTGTTTGGGAGATTGTTTGAGGAGAGTCAAAAGTTCTTTACACTTCCTTTGGATGATAAAATGAAAATAGCTCGCAAAGGAATTCGTGGATATACTCCTTTATATCACGAGAAGTTGGATACCGCTACCTCTACCAAAGGTGATTCTAAGGAGTTTTTGGACATTGGGCCGCTTCATGATGAAGTTAGAGATTCGAACCAGTGGCCTTCTGAAGAGCTTCTTCCAAACTGGAAAACAACCGTGGAAGCATACCATGATAAAATCATGAAAGCTGGAAAAAGATTATATTCACTTCTTGCTGTGGCCTTAAACCTAAGTGAGAACTATTTCGAAGACATTGGAGCTTTGGATCCACCAATGCCTTTCATTCGCCTCTTACGTTACCCAGGGGACCTCAGTTACTACACTAATGAAGTTCTAGGTGCTTCTGCTCATTGTGATTATGGAATGATGACCCTATTAGCGACTGATGGTGTTGCTGGACTACAGGTTTGCCGGGAAAAAGATCGTCAGCCACGTATTTGGGAGGATGTTCTTCATATTGAGGGGGCCTTAGTTGTCAACATTGGGGACCTTACTGAGAGGTGGACGAATAACGTGTTTAGGTCAACATTGCATAGAGTGGTGCCAACAGGACAAGAACGTTACTCAGTGGCTTTCTATCTTGACCCATCGCATGATCTTATGGTGGAGTGCTTAGAAACTTGTTGCAGCGAATCAAATCCTCCAAGATTTCCTCCATTCCGTTATATTGACTACCTTTTAGAACGTTTTGAGGGCACATTTGAAGCTTGA MGVGEETTTTVANLPIIDLSAPDRESTAATLRQACIDFGFFYIVNHGVDKDLFGRLFEESQKFFTLPLDDKMKIARKGIRGYTPLYHEKLDTATSTKGDSKEFLDIGPLHDEVRDSNQWPSEELLPNWKTTVEAYHDKIMKAGKRLYSLLAVALNLSENYFEDIGALDPPMPFIRLLRYPGDLSYYTNEVLGASAHCDYGMMTLLATDGVAGLQVCREKDRQPRIWEDVLHIEGALVVNIGDLTERWTNNVFRSTLHRVVPTGQERYSVAFYLDPSHDLMVECLETCCSESNPPRFPPFRYIDYLLERFEGTFEA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo25880.1 vs. NCBI nr
Match: gi|902237595|gb|KNA24851.1| (hypothetical protein SOVF_011890 [Spinacia oleracea]) HSP 1 Score: 486.1 bits (1250), Expect = 4.600e-134 Identity = 227/312 (72.76%), Postives = 263/312 (84.29%), Query Frame = 1
BLAST of Spo25880.1 vs. NCBI nr
Match: gi|731332211|ref|XP_010677081.1| (PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 485.3 bits (1248), Expect = 7.900e-134 Identity = 224/310 (72.26%), Postives = 262/310 (84.52%), Query Frame = 1
BLAST of Spo25880.1 vs. NCBI nr
Match: gi|731332215|ref|XP_010677083.1| (PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 465.7 bits (1197), Expect = 6.400e-128 Identity = 216/313 (69.01%), Postives = 257/313 (82.11%), Query Frame = 1
BLAST of Spo25880.1 vs. NCBI nr
Match: gi|694433837|ref|XP_009344185.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase-like [Pyrus x bretschneideri]) HSP 1 Score: 428.7 bits (1101), Expect = 8.700e-117 Identity = 192/307 (62.54%), Postives = 249/307 (81.11%), Query Frame = 1
BLAST of Spo25880.1 vs. NCBI nr
Match: gi|595847723|ref|XP_007209384.1| (hypothetical protein PRUPE_ppa009079mg [Prunus persica]) HSP 1 Score: 426.8 bits (1096), Expect = 3.300e-116 Identity = 194/305 (63.61%), Postives = 246/305 (80.66%), Query Frame = 1
BLAST of Spo25880.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZB1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_011890 PE=3 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 3.200e-134 Identity = 227/312 (72.76%), Postives = 263/312 (84.29%), Query Frame = 1
BLAST of Spo25880.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CD92_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g104690 PE=3 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 5.500e-134 Identity = 224/310 (72.26%), Postives = 262/310 (84.52%), Query Frame = 1
BLAST of Spo25880.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F728_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g104700 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 4.500e-128 Identity = 216/313 (69.01%), Postives = 257/313 (82.11%), Query Frame = 1
BLAST of Spo25880.1 vs. UniProtKB/TrEMBL
Match: M5WMS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009079mg PE=3 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 2.300e-116 Identity = 194/305 (63.61%), Postives = 246/305 (80.66%), Query Frame = 1
BLAST of Spo25880.1 vs. UniProtKB/TrEMBL
Match: A0A067KUL8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03437 PE=3 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 1.100e-115 Identity = 195/302 (64.57%), Postives = 244/302 (80.79%), Query Frame = 1
BLAST of Spo25880.1 vs. ExPASy Swiss-Prot
Match: Y3291_DICDI (Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.700e-33 Identity = 108/309 (34.95%), Postives = 155/309 (50.16%), Query Frame = 1
BLAST of Spo25880.1 vs. ExPASy Swiss-Prot
Match: DIOX2_ARATH (Probable 2-oxoglutarate-dependent dioxygenase At3g49630 OS=Arabidopsis thaliana GN=At3g50210 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.200e-30 Identity = 98/310 (31.61%), Postives = 149/310 (48.06%), Query Frame = 1
BLAST of Spo25880.1 vs. ExPASy Swiss-Prot
Match: ACCO1_DICDI (1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.100e-30 Identity = 88/308 (28.57%), Postives = 148/308 (48.05%), Query Frame = 1
BLAST of Spo25880.1 vs. ExPASy Swiss-Prot
Match: ACCO1_DICMU (1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.100e-30 Identity = 88/308 (28.57%), Postives = 148/308 (48.05%), Query Frame = 1
BLAST of Spo25880.1 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.000e-29 Identity = 78/293 (26.62%), Postives = 138/293 (47.10%), Query Frame = 1
BLAST of Spo25880.1 vs. TAIR (Arabidopsis)
Match: AT4G16770.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 375.9 bits (964), Expect = 2.400e-104 Identity = 171/305 (56.07%), Postives = 226/305 (74.10%), Query Frame = 1
BLAST of Spo25880.1 vs. TAIR (Arabidopsis)
Match: AT4G16765.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 301.2 bits (770), Expect = 7.400e-82 Identity = 138/244 (56.56%), Postives = 179/244 (73.36%), Query Frame = 1
BLAST of Spo25880.1 vs. TAIR (Arabidopsis)
Match: AT1G35190.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 301.2 bits (770), Expect = 7.400e-82 Identity = 144/315 (45.71%), Postives = 204/315 (64.76%), Query Frame = 1
BLAST of Spo25880.1 vs. TAIR (Arabidopsis)
Match: AT3G46490.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 280.8 bits (717), Expect = 1.000e-75 Identity = 135/315 (42.86%), Postives = 199/315 (63.17%), Query Frame = 1
BLAST of Spo25880.1 vs. TAIR (Arabidopsis)
Match: AT3G46480.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 250.4 bits (638), Expect = 1.500e-66 Identity = 128/307 (41.69%), Postives = 185/307 (60.26%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25880.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25880.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25880.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25880.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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