Overview
| Name | Spo26117.1 |
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| Type | mRNA |
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| Organism | Spinacia oleracea (Spinach) |
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| Description | Unknown protein |
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| Location | SpoScf_02724 : 5711 .. 6291 (-) |
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| Sequence length | 387 |
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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. GATGCACATGCCCCAATTGAATTGGATTGTGAGAAGAGTCGAATCATTTGAACCAAAAAGAAGTAAACCCACGTTTTTCAACTCCATCCACAAAATAAATACGGAGTAAATAAATAAAAATAAGCAAGAGAAAAAGAAAAACTTCTGCACACTCCCACTGCGAAACTCAACCATCGCTCCCCTATGCACCATTGCCTTCAACTGTGTTGGCCACCACCAAACCTTCCTCTCCGTCGATCTCTCTGCTCCCTTCAATCAATTTTCTGCTCTCCTGTGATTCTCCTCCTCATCGCTTCTCATTCTCTCCTCTCCTGTGCAGCTTGTTGGTTTATAAATTCAATTATTCTTGGCTTGGAGTTTCACTGATTTCCTCTTCTTCTTTTTTATTGATTAATTGCAATTATTTGATTTTATTTTTGCAGTTGTTTTTGTTGAAAACTACGGAGTATGCAGCTTGTTGTACTTATATTATGGATCTATGTGAGTTTAAATTTGCAAATTTTGTGGGTTTATGATTTAGGGATTTAACTGGTTGATTCGATTTTTATTGTTTCTACTTGATTTTCTAATTCAGGTATTAA mRNA sequence GATGCACATGCCCCAATTGAATTGGATTGTGAGAAGAGTCGAATCATTTGAACCAAAAAGAAGTAAACCCACGTTTTTCAACTCCATCCACAAAATAAATACGGAGTAAATAAATAAAAATAAGCAAGAGAAAAAGAAAAACTTCTGCACACTCCCACTGCGAAACTCAACCATCGCTCCCCTATGCACCATTGCCTTCAACTGTGTTGGCCACCACCAAACCTTCCTCTCCGTCGATCTCTCTGCTCCCTTCAATCAATTTTCTGCTCTCCTGTGATTCTCCTCCTCATCGCTTCTCATTCTCTCCTCTCCTGTGCAGCTTTTGTTTTTGTTGAAAACTACGGAGTATGCAGCTTGTTGTACTTATATTATGGATCTATGTATTAA Coding sequence (CDS) ATGCACCATTGCCTTCAACTGTGTTGGCCACCACCAAACCTTCCTCTCCGTCGATCTCTCTGCTCCCTTCAATCAATTTTCTGCTCTCCTGTGATTCTCCTCCTCATCGCTTCTCATTCTCTCCTCTCCTGTGCAGCTTTTGTTTTTGTTGAAAACTACGGAGTATGCAGCTTGTTGTACTTATATTATGGATCTATGTATTAA Protein sequence MHHCLQLCWPPPNLPLRRSLCSLQSIFCSPVILLLIASHSLLSCAAFVFVENYGVCSLLYLYYGSMY
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Type |
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| Spo26117 | Spo26117 | gene |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
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| Spo26117.1 | Spo26117.1-protein | polypeptide |
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| Spo26117.1.utr5p.1 | Spo26117.1.utr5p.1 | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| Spo26117.1.CDS.3 | Spo26117.1.CDS.3 | CDS |
| Spo26117.1.CDS.2 | Spo26117.1.CDS.2 | CDS |
| Spo26117.1.CDS.1 | Spo26117.1.CDS.1 | CDS |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
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| Spo26117.1.exon.3 | Spo26117.1.exon.3 | exon |
| Spo26117.1.exon.2 | Spo26117.1.exon.2 | exon |
| Spo26117.1.exon.1 | Spo26117.1.exon.1 | exon |
Homology
The following BLAST results are available for this feature:
BLAST of Spo26117.1 vs. NCBI nr
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
| Match Name | E-value | Identity | Description | |
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BLAST of Spo26117.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
| Match Name | E-value | Identity | Description | |
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BLAST of Spo26117.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
| Match Name | E-value | Identity | Description | |
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BLAST of Spo26117.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 ( blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
| Match Name | E-value | Identity | Description | |
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