Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTCTTCCAAGTTTAGCTACATTATTAGCCAAGACAATTAGCATATGGCTGATCTTGGTATTGAGCCATGTTATTGAGTGTCATGGTTCCCGATTGCCGGAAAGGCGTTCAAGATTGGGCGACCGGGGTAAGCTCGATGGTCAACTACGTTCACGTCTATTGCTTTCGCCGGAAGCCGATTCTCCATTTAGTTCTTTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTACCCCATTTAGTCCAATAATAAGTCCTACAAATCCTTCAATCCCTCCATCTAGTCCTCCAGTTGAATCTTCGTCTACTCCATCAATAAGCATTAGTCCTTTGGCTAGTCCTCCAACGCAATCTTCCACTCCATCAATTGATTCTAATAGTTCATCAAATCCTTCAAGACCTTCAGGTTTGCAAGTTGGATTCTACAGAGGTCAATGTCCTAATAAAAATGTTGATGTCGAGGCTACCATTACGGCCAAAGTCCAACAACATTTCCTCAAGGATGAAACTCTTCTCCCCGCTCTCCTTCGTATGCAATTTCATGATTGTTTTGTCCATGTAACTACTTAACCATTCTATATGTTAGTTAAATTAAAATCATACACATTTTGTTAGCTAACTTGTTGAATGATGTCTATTTCTTAAAGGGGTGTGACGCGTCAATCCTCATTGATGGACCTTCCAGTGAGAAAACCGCGTTACCTAATTTGAGTGTTAGGGGATACCAACTTATTGATGCCTTGAAAGATGCAGCAGAAGCCGAATGTCCGGGCATTGTTTCATGTGCCGACATTATTGCTATCGCTACTAAACAACTTATTAAGCTGGTAAACACACATATGTTTTTCTCTTTTTTTATCCCCCATCTGAATCTTGAATAAATATACGAGTAGTTTTAATTGGTTTTTTATTTTAAAAATAATATATTCTCTGATTTTATGTCTCCTTTCAAATACGTAGGGTGGAGGACAAGAATATCCAGTACAAACAGGGAGAAGAGATGGAGTTGTATCAGTATCTCAAGATGTGATGCTTCCAAGCCCTTTCGCATCAGTACAAGAAACTATTTCAGCCTTCGCTGCTGAAAATTTTAATCCTGAAGAAATGGTTCTTCTCTTTGGTATGCCTATACTTCTCTCCAATATTTTTCTTTTTAAAGTACAATCATTTTCTGTTATTTAAAGTACTTATGATGTGGCGTCAAAAAACTGATTCATGGCCATTTGTACCATTCACTTAAACCACAAAAATTAAAATTTAAATTAAAATTAAAATTAAATTAACATTAAATACACAAATATGCAATATGAAAAATATCAATAGAAAGGACACGAACTATTCATTAATAAGAGAGCACATGTCGACCGACCATGTCATGTACTATCGGTCTATCGCGTATGCATTTTCAAATTAGGATGCATATAAATCTATTCATTACTAGAGGAGCACATCTATTAATACTTGCACTGCTTTTTCTATTGGTTCGTCCCTTAATACTTACACCGCTTCTATAAATAATTTTTTTTTATTAATATTATATTATTCCACGTACTTACCTACTAAGTACTAACCATTCCCTGCAAAAATTTACTTTAAAATTCACACCCCCACTACCCCTTACAACTTTCTCACTAACTATATAAAAAAAATACCTCACCATCAACTACCACCTATTTAATTACTAAGTCAATTCAAGTGTCTTAAACTCCGCACTGGTCAAACTGGTGCGAGTATTAAGGGACGGAGAGAGTATTTTAGTAGGAGAGAGCATCTCTAACGATAAGCTAGTTGCTAAATTAGCTTGTCATGCCATGTAATATTTTAAACTACTTTCCTTTCTAGTTAGTTAGTACCCCAATAGTTAAATACTACTTCCGTTTCAAAAAGATCTCTACACTTACTATTTACATGGAATCCGGTGAAATATTTGACCGTTAATATATTCAAATCTGTATGGCGAAAAAATAATAAAAAGTTGTTATTTATAAAATACATTTTGAAACGAATCTATCAAGATATCTCATGATAACTTTTGATAAATATAATAGTGAGAATTTTTAGTCAAAAAATTGGTTTTTGGACAAACTTTTCAAAGCGTAAAGAACTTTATGAAACGGAGGTAGTACAAGTTTAATAGTTAATGTAGTCATATTCGTCAATCAATATTTTCATTTTAATTTTATTTAATAATATTTCATTGGCCAACATTTTTTCAAACAAGTTAGCTTTCCTAAGCTAATTTGCTTGGTCAACCTAATTTATTATTTCAACCCTAATGGTCAAACTAATAACTTGGAATGTTTGACATTTACTCCCTCTGTATTTATTTAAGAGATACACTTGTTATTTTTAATAACTTATCAACCCCACCATCTAATTAAATAATACATCTAATTTACCCTATTACTACCATCCTATTTAACAAATAATTTCATAAACCCACCTCACCTCCTACCTTCCAAAATGACATGGTCCCCACTTGTTTATTTATTAAAATATCTACCCAACTCCACTTGCTTTATTATTTTATTTCATTTTAACTATTTTTCTTAATACTCATGCCCGACCAAGTGTATTTCTTAAATAAATACGGAGGAAATATAAGCAACTCCGTAACTGCAAGTCTAGAACCATTGTGGCTTCCCTTATATGCCTAACCTAAAGGAAACAAAATTCTGAGTTATGTTTGAAAATAAATTAGACCTCGATCAGTAAGAAAAAATATTTCATGATTGAAACAATTTAGTTAACTCAAGTTTCAATTTGAACGTGTCAAAGTGTCTCCATCTCTCCGACTCAATATGCTATTTTCGAGAAACATACACAGTGATAAAATATTAATAATATGTTATTTTCGAGAAACATGTACAATGATAAAATATTACTTACCTCTGTTTCTTTTTATTTGTCCATTTAAAAATATTTCATTTTGACAATAAGTTTTTATAGATATATAATATAGTAGAAAAAACATAAGCATGTGACTATCTTGTTGGATTACTTGATTGAGTATAGTAAAATCCCCAATTAAGCTAGCTTTTATTAACCCGAACACTAATTGTTGATTACTGTTTGCATGAAACAGGTGGTCACACAGTGGGAAAATCACATTGTACATTCTTCCAAGATCGACTTTACGAAGATGCTAACCAATTCGATCCAAATATGGATGCAGACCTACGTCGACAACTAAGTCTTACTTGCCCTAAAGGCACAACAGCAGACAACTTTGCTTTTCTTGATCAAAATACACAAAGCTCAAACATATTTGACAATTCTTTCTTTGATCAAATCCTCAAGGGACGAGGAATCCTCCCAATCGATCAAGAATTAGCTCGCGATCCTCAAACGAGTGCTTTTGTTCTACAGTTTGCCCGAAATCCTAACTTATTCAATGCTAAATTCGCGAATGCTATGGTTAAATTGCAATCCCTTGGTATCCACACTAGTGATCATGGAGAGATTAGGAAAGTTTGTAGTCAAATTAACTAAGATCGATCTACTTATATGTTTCTTGTTCAAGAATTAGATTACTAACCATTGTATTTGTATAGCCTCAATTTCAAAATTCTTGGGTTTACAAGATCTTCCCTTTGGATTCCATTTCCAAGCTTGCTGTATAGTAGTTTGGACACGTTGCCATTTTGAGTTTCGTTTACATTCTTTTTCCAATTTGATTAATAAATACTTCCT ATGAGTCTTCCAAGTTTAGCTACATTATTAGCCAAGACAATTAGCATATGGCTGATCTTGGTATTGAGCCATGTTATTGAGTGTCATGGTTCCCGATTGCCGGAAAGGCGTTCAAGATTGGGCGACCGGGGTAAGCTCGATGGTCAACTACGTTCACGTCTATTGCTTTCGCCGGAAGCCGATTCTCCATTTAGTTCTTTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTACCCCATTTAGTCCAATAATAAGTCCTACAAATCCTTCAATCCCTCCATCTAGTCCTCCAGTTGAATCTTCGTCTACTCCATCAATAAGCATTAGTCCTTTGGCTAGTCCTCCAACGCAATCTTCCACTCCATCAATTGATTCTAATAGTTCATCAAATCCTTCAAGACCTTCAGGTTTGCAAGTTGGATTCTACAGAGGTCAATGTCCTAATAAAAATGTTGATGTCGAGGCTACCATTACGGCCAAAGTCCAACAACATTTCCTCAAGGATGAAACTCTTCTCCCCGCTCTCCTTCGTATGCAATTTCATGATTGTTTTGTCCATGGGTGTGACGCGTCAATCCTCATTGATGGACCTTCCAGTGAGAAAACCGCGTTACCTAATTTGAGTGTTAGGGGATACCAACTTATTGATGCCTTGAAAGATGCAGCAGAAGCCGAATGTCCGGGCATTGTTTCATGTGCCGACATTATTGCTATCGCTACTAAACAACTTATTAAGCTGGGTGGAGGACAAGAATATCCAGTACAAACAGGGAGAAGAGATGGAGTTGTATCAGTATCTCAAGATGTGATGCTTCCAAGCCCTTTCGCATCAGTACAAGAAACTATTTCAGCCTTCGCTGCTGAAAATTTTAATCCTGAAGAAATGGTTCTTCTCTTTGGTGGTCACACAGTGGGAAAATCACATTGTACATTCTTCCAAGATCGACTTTACGAAGATGCTAACCAATTCGATCCAAATATGGATGCAGACCTACGTCGACAACTAAGTCTTACTTGCCCTAAAGGCACAACAGCAGACAACTTTGCTTTTCTTGATCAAAATACACAAAGCTCAAACATATTTGACAATTCTTTCTTTGATCAAATCCTCAAGGGACGAGGAATCCTCCCAATCGATCAAGAATTAGCTCGCGATCCTCAAACGAGTGCTTTTGTTCTACAGTTTGCCCGAAATCCTAACTTATTCAATGCTAAATTCGCGAATGCTATGGTTAAATTGCAATCCCTTGGTATCCACACTAGTGATCATGGAGAGATTAGGAAAGTTTGTAGTCAAATTAACTAAGATCGATCTACTTATATGTTTCTTGTTCAAGAATTAGATTACTAACCATTGTATTTGTATAGCCTCAATTTCAAAATTCTTGGGTTTACAAGATCTTCCCTTTGGATTCCATTTCCAAGCTTGCTGTATAGTAGTTTGGACACGTTGCCATTTTGAGTTTCGTTTACATTCTTTTTCCAATTTGATTAATAAATACTTCCT ATGAGTCTTCCAAGTTTAGCTACATTATTAGCCAAGACAATTAGCATATGGCTGATCTTGGTATTGAGCCATGTTATTGAGTGTCATGGTTCCCGATTGCCGGAAAGGCGTTCAAGATTGGGCGACCGGGGTAAGCTCGATGGTCAACTACGTTCACGTCTATTGCTTTCGCCGGAAGCCGATTCTCCATTTAGTTCTTTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTTGGCCCGAATCTTCTGATCCTCCATTTAGTCCATTTACCCCATTTAGTCCAATAATAAGTCCTACAAATCCTTCAATCCCTCCATCTAGTCCTCCAGTTGAATCTTCGTCTACTCCATCAATAAGCATTAGTCCTTTGGCTAGTCCTCCAACGCAATCTTCCACTCCATCAATTGATTCTAATAGTTCATCAAATCCTTCAAGACCTTCAGGTTTGCAAGTTGGATTCTACAGAGGTCAATGTCCTAATAAAAATGTTGATGTCGAGGCTACCATTACGGCCAAAGTCCAACAACATTTCCTCAAGGATGAAACTCTTCTCCCCGCTCTCCTTCGTATGCAATTTCATGATTGTTTTGTCCATGGGTGTGACGCGTCAATCCTCATTGATGGACCTTCCAGTGAGAAAACCGCGTTACCTAATTTGAGTGTTAGGGGATACCAACTTATTGATGCCTTGAAAGATGCAGCAGAAGCCGAATGTCCGGGCATTGTTTCATGTGCCGACATTATTGCTATCGCTACTAAACAACTTATTAAGCTGGGTGGAGGACAAGAATATCCAGTACAAACAGGGAGAAGAGATGGAGTTGTATCAGTATCTCAAGATGTGATGCTTCCAAGCCCTTTCGCATCAGTACAAGAAACTATTTCAGCCTTCGCTGCTGAAAATTTTAATCCTGAAGAAATGGTTCTTCTCTTTGGTGGTCACACAGTGGGAAAATCACATTGTACATTCTTCCAAGATCGACTTTACGAAGATGCTAACCAATTCGATCCAAATATGGATGCAGACCTACGTCGACAACTAAGTCTTACTTGCCCTAAAGGCACAACAGCAGACAACTTTGCTTTTCTTGATCAAAATACACAAAGCTCAAACATATTTGACAATTCTTTCTTTGATCAAATCCTCAAGGGACGAGGAATCCTCCCAATCGATCAAGAATTAGCTCGCGATCCTCAAACGAGTGCTTTTGTTCTACAGTTTGCCCGAAATCCTAACTTATTCAATGCTAAATTCGCGAATGCTATGGTTAAATTGCAATCCCTTGGTATCCACACTAGTGATCATGGAGAGATTAGGAAAGTTTGTAGTCAAATTAACTAA MSLPSLATLLAKTISIWLILVLSHVIECHGSRLPERRSRLGDRGKLDGQLRSRLLLSPEADSPFSSFSPFWPESSDPPFSPFWPESSDPPFSPFWPESSDPPFSPFTPFSPIISPTNPSIPPSSPPVESSSTPSISISPLASPPTQSSTPSIDSNSSSNPSRPSGLQVGFYRGQCPNKNVDVEATITAKVQQHFLKDETLLPALLRMQFHDCFVHGCDASILIDGPSSEKTALPNLSVRGYQLIDALKDAAEAECPGIVSCADIIAIATKQLIKLGGGQEYPVQTGRRDGVVSVSQDVMLPSPFASVQETISAFAAENFNPEEMVLLFGGHTVGKSHCTFFQDRLYEDANQFDPNMDADLRRQLSLTCPKGTTADNFAFLDQNTQSSNIFDNSFFDQILKGRGILPIDQELARDPQTSAFVLQFARNPNLFNAKFANAMVKLQSLGIHTSDHGEIRKVCSQIN Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo26341.1 vs. NCBI nr
Match: gi|902203095|gb|KNA14471.1| (hypothetical protein SOVF_107260 [Spinacia oleracea]) HSP 1 Score: 909.1 bits (2348), Expect = 3.200e-261 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1
BLAST of Spo26341.1 vs. NCBI nr
Match: gi|731366272|ref|XP_010694980.1| (PREDICTED: mucin-2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 483.8 bits (1244), Expect = 3.400e-133 Identity = 275/431 (63.81%), Postives = 311/431 (72.16%), Query Frame = 1
BLAST of Spo26341.1 vs. NCBI nr
Match: gi|731340289|ref|XP_010681316.1| (PREDICTED: peroxidase 57-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 446.8 bits (1148), Expect = 4.600e-122 Identity = 222/329 (67.48%), Postives = 264/329 (80.24%), Query Frame = 1
BLAST of Spo26341.1 vs. NCBI nr
Match: gi|731340468|ref|XP_010681409.1| (PREDICTED: peroxidase 57-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 423.3 bits (1087), Expect = 5.400e-115 Identity = 208/317 (65.62%), Postives = 253/317 (79.81%), Query Frame = 1
BLAST of Spo26341.1 vs. NCBI nr
Match: gi|902221848|gb|KNA19030.1| (hypothetical protein SOVF_065090 [Spinacia oleracea]) HSP 1 Score: 412.9 bits (1060), Expect = 7.300e-112 Identity = 210/325 (64.62%), Postives = 246/325 (75.69%), Query Frame = 1
BLAST of Spo26341.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4P4_SPIOL (Peroxidase OS=Spinacia oleracea GN=SOVF_107260 PE=3 SV=1) HSP 1 Score: 909.1 bits (2348), Expect = 2.300e-261 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 1
BLAST of Spo26341.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BD43_BETVU (Peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g096700 PE=3 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 2.300e-133 Identity = 275/431 (63.81%), Postives = 311/431 (72.16%), Query Frame = 1
BLAST of Spo26341.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3T5_BETVU (Peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g141270 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 3.800e-115 Identity = 208/317 (65.62%), Postives = 253/317 (79.81%), Query Frame = 1
BLAST of Spo26341.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHS7_SPIOL (Peroxidase OS=Spinacia oleracea GN=SOVF_065090 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 5.100e-112 Identity = 210/325 (64.62%), Postives = 246/325 (75.69%), Query Frame = 1
BLAST of Spo26341.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C8M0_BETVU (Peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g140450 PE=3 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.100e-109 Identity = 201/289 (69.55%), Postives = 237/289 (82.01%), Query Frame = 1
BLAST of Spo26341.1 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.200e-69 Identity = 143/299 (47.83%), Postives = 189/299 (63.21%), Query Frame = 1
BLAST of Spo26341.1 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 9.300e-67 Identity = 135/306 (44.12%), Postives = 177/306 (57.84%), Query Frame = 1
BLAST of Spo26341.1 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.500e-66 Identity = 139/300 (46.33%), Postives = 176/300 (58.67%), Query Frame = 1
BLAST of Spo26341.1 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 3.300e-64 Identity = 142/306 (46.41%), Postives = 182/306 (59.48%), Query Frame = 1
BLAST of Spo26341.1 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 2.800e-63 Identity = 128/302 (42.38%), Postives = 180/302 (59.60%), Query Frame = 1
BLAST of Spo26341.1 vs. TAIR (Arabidopsis)
Match: AT5G22410.1 (root hair specific 18) HSP 1 Score: 265.4 bits (677), Expect = 6.600e-71 Identity = 143/299 (47.83%), Postives = 189/299 (63.21%), Query Frame = 1
BLAST of Spo26341.1 vs. TAIR (Arabidopsis)
Match: AT5G17820.1 (Peroxidase superfamily protein) HSP 1 Score: 253.8 bits (647), Expect = 2.000e-67 Identity = 139/300 (46.33%), Postives = 176/300 (58.67%), Query Frame = 1
BLAST of Spo26341.1 vs. TAIR (Arabidopsis)
Match: AT3G03670.1 (Peroxidase superfamily protein) HSP 1 Score: 247.3 bits (630), Expect = 1.900e-65 Identity = 142/306 (46.41%), Postives = 182/306 (59.48%), Query Frame = 1
BLAST of Spo26341.1 vs. TAIR (Arabidopsis)
Match: AT5G39580.1 (Peroxidase superfamily protein) HSP 1 Score: 244.2 bits (622), Expect = 1.600e-64 Identity = 128/302 (42.38%), Postives = 180/302 (59.60%), Query Frame = 1
BLAST of Spo26341.1 vs. TAIR (Arabidopsis)
Match: AT5G64120.1 (Peroxidase superfamily protein) HSP 1 Score: 242.3 bits (617), Expect = 6.000e-64 Identity = 126/315 (40.00%), Postives = 185/315 (58.73%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26341.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26341.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26341.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26341.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|