Spo26421.1 (mRNA) | SpinachBase

Overview


Name	Spo26421.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	NADH dehydrogenase 1 beta subcomplex subunit 8
Location	SpoScf_01155 : 122766 .. 129977 (-)
Sequence length	983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGCAATGAATCTATTTGTAGTCATCTACATTACGTTCTCTTAGCCCATTAACATATGCTCAATCCTTCGGCCTAGGACATGAGAGTTTGACGAACCACCATTTTCAGTGTGTGTGGATCAACAACCGAACTCCCTCGTCAGTCGTCTCGCAAATCAAACCATCGCCGGTGAAAGAGAGAGTGAAATCAAATGGCAGGAAGATTGAGCAAAGTAGCTTCAACGATACTAGGTGGAAACGGCGTCGTTTCCCGTTCTGTGGGTAACTCCCTCCGTCAACGTGCGGGCATGGGCCTTCCCGTCGGCAAGCATCTCGTCCCCAACAAACCGGTTTCTCTCTCCTCATTTTCTCTTTAGTTAAATACTCATAATTTGTTTTTCGCTTTACAATCGGACTTAATTCTGGTTTAATATTTTCTGAAATTGATTGCGGGCATTAGCTTTCGGTGAACGATGAGTTGACATGGGATAACGGTACTCCATTTCCCGAGCCTTGTATCGATCGGATCGCCGACACTGTTGGCAAGGTTAGGGTTCGATATTGATATTGATAGTTAGTAATTAAAATCAAAATCATTAGGGTTGAGTTATTAATTTTGTTGGTTTGGGAATTTCAGTACGAAGCATTAGCTTGGTTGTCCGGTGGACTGAGTTTCTTCGCTTTACTCGGATTGGCCGCCGTCGTGAATGATAAGGCTTCTACATATCCCTTTGTAAGTTCTTTTTTCCTTTTTCTTTTATTAGGGTTTTGTCTGACATGTGATCTCAATTGGGTTAGCTGATGAGACATTTTGATTTGTTCATTTTCCTAATTTGGATAGAATAGTTGCTACGATTGTCTAGTTGCGAACCTTTGAATGTCTGTATTTAGGTAGAAGCATTTTACTGAGTATTTAAATTTGACTGCATTGCATTTGATTGCCATATGCTAGCTATAATTTCTTGCTGTAGTTCTTCCCAATTCCTCCATTTTAACAGCCCTTTCTGTAGATGGTAATAAATAGGGTAATGGTAATGGTAATGATTTTATATGTATGAGCTTTTGCTAGTAGACACATGGTAGGATTAGAAGCTCATACATATAAAATCATTACCATTACATATAAAATTGCCTTCTATTTGGCCCGACAGGTTTATGTAAATATGTTACAAAATACAAATGGATCTTTGTGTCTTGTGAATTTCTGTTAAGAGTACAATTTCTTCGGCGTGTTTTGTGTTTAAATCTCAAAATCCATGGGAATATGGGATTGAGAAATGGAGTCATGTCATCATGTCAAGTTAAGTTTTGCACTACCAGAAATAGAGGCATAGGAATCATTTACCAAGATGAATCCAGATAGTATTCTTTGTATCATCACTGATCACTAACATATGGTAGAGGTTTTGGAACATCGAATGAGCTCAATGACCTCGAGTAAGGTCTTTTTTATTCGTGCAATAGTTAGCTTCACTATAAAACTTGCCGAAAACAAGAAGTTAGGTACTTCCTTTATAATCACTTTTTATCTCCATGAGAGCATCTGAGCATGAGAAGACTGCTCTTTTGCTTTTTGTCTGACAGACGCTGGTGTGACCTTGCCTAATATCTGAACAAAGAGATTGTTAAGTATACTTAAATCATTGTAAATATCCATGCTTTACTTTGTCACTGGTCTTAGCTGTAGATATATGGTTTACTCTCTACCTCTAATTTTAGAAGGCTTGGGTGTTGGCTGAGTGGGTACTATGTTATTTATGGGTTTAAACCTTAGGTTTGAGGAGAGTTGATCCGTTATTTGTCTGAACTAGCTGTATAGCTCGGCGTTCTAGGACTGCATAATTAGGGTGGGAGCGTTGTTACATATTTAAATGTACTATGTTTCCTCCTAAAAAATAAAACATGTTGACAATTTGACATAAAGTCCTATTTATCAATAATGTTACCTAGTTTTGTTAGACTAGCTCAACTGTGTACTGATCAGTCCAGTATACCATGTACTAGTGAGCATGTTCTGTAACTTGATTGGGGGTGGGGTTAAGCCAACTAGGTTAGGGTGGATAAGTAAGGCTTTTAAGTTTGTTGTGAACCTTGTAATATGGCGCTTAAGACGCCATAAACTTGAGTGAGTTCCAGGGGTGAGGTTAAGCCAATTAGGTTAGGGTGGATAGATGAGGCTTTAAAGTATGTCGTGAGCCTTGTCAAATGGCGCTAAAGACCCGAGTGTGTTTCGAGGGTGGGGGGAGTGGGGTTAAGCCAATTAGGTTAGGGTGGATAGATGAGGTTGTTAAGTATGTCATGAAACTTGTAACATGGCGCTTCAGATGTTTAACTTGAGTGCTTTCTGTCTTTAACGTATGTGGATCGAAGTAACTTGAAGGTAACAAAAGTTACATGGCAGCATGAGTAACTAGTAACAAATATTTGTTCTACTATTCTTTCTTTCCTGTTTTTTTCCCCTTGTACTTTTGCTTGTGTGCTAGTTTTCAACAGTTTGATGGTAGTGATCTATTGGTCTTTTTTTCTACCAAGTTCTTTACTTGTCTACCTGTCCCCCCCACCTGTTGGGTTGCTAAAGTGTTGAAGTTGTAATCAAGGACATGTTTAGCCAAGCTTCTCGAAAAGAACATTTTCTCCACTTTTCCAGAAGCTATATCTACATAAATTTTAGTTGTTTGACCTTAGTTTTAAAAAGCGCGCTTTTTTGCGCTTAAAGCTCGGAAGCTCAGAAGCTCACACCAAAACGCTTCTACCAGCCGAAGCCCAGCGACATACAAGAAGCGCGCGCTTCCTAGCGCTTCGGTGCTTCTGCGCTTCCTAGCGCTTTTGCGCTTCCTGTAGTCTAGGCACTTCAGACCCTTCTTTTCTATAACAAATAAAGCCACGTGACTCTAATCTTCTTTTTAAAAGTATCACGTGATTTTTTTTTTTAAAAAGCGAATATTTGGGAAGTTTTTGAAAACCTTAGTGCAATTTTCTCCCGTAGCCGGATTTCTCTAGCCTTCTCGCCGGATTTCTCCCGTCTGATTCTGAATTTTTCTTTCATCGTTTTGATTTCTCTATTTTTTTTCCATCTTTTCTTTCCATATTTTCTCCATATGTTCTGAACTTTTGAAAATTTATTATTTCTTTTCGGGTGTGCTTCGCCTACGAAAAGCGTGCGCTTTCGCTTTGCGCTTAAGCTCCAGGGCCCTTTTGCGCTTCAATGCGCTTCGCGCTTTTTAAAACTAAGTGTTTGACCAATCTAATTCGAGAAGTGTTTTTTTAAGAAACAAAAAACTCTTACAGTGTTTGGCCCATTTTTAATGAACTTTTGGCCTCTTTATTTTTTATTCCTTCCTCTCCCTTCTCCCCTAGCCCACTCTGTCCTTTTCTCAGTAACGATGAGTAAACACTATTGTTTGTAAAAAAATGATGGACTGATGGTACTCACCATCATGAAAAGGAAATCATGTTATCAAATCCAAATCTGATACCCATCAACACAGTGTTAGATTTCAACCATTTTATAACTGCAAATAATTGATATGGATTGATGTTACTCACCATTTTCAAAGAGTGAATATTTGTTGTTAATTACTAGTATGATTTGTGTGAGAGAGATGTTAGGATGTCCATACTTTTTCTATCAAGGGTATTTATTGCCAATATAAACTTTCATTAAATGGGGTAAAACAGTTCCCTAGAAACCGAAAGCGTAAGCTACAACTTAGATCTTCTGTTTCTAGTGGGCTTGGGAGCTTATTTGGGCCATATATCCTTGTCTAACCTTGGCCTGTTTCTGCTTTCTATAGGGGAGTATTTGAGTATTTCCCTTCGTAATCATTCCAACACTAGAAGGATTTGGCATATTAAAGTTTTATCCAAACAAGGGAAGAAGAATCCCTCACCTTCTCTTCCCTTCATTTCCCTGCACGTTTCACTAATAAAAACAAACCGTAAATCTCTATGAGACATGTTTCTGTAGTTCCAGAAAACATCCTCTTTAGTAAACCAAAAGAATATTTTAGATCTGTTGATATGTAGGAGTTGAAAACATCACCTGAATTGTAGTATGTTGTCATTCTTTTTTCAAAAAGTTCAGCTGAGCTGTTATTGGTTTTGTGCTCAACAGACTAATAAATCTAATTTGACTAAATGCAGATAGACCTTTCAAATCAAATGGCCAAGCTAATTCCTACATACACCGTATACTACATGAAAAATCCTTTTGAAGTTAATAATCACATTGATAGTGATAGAGATAGACTTCTAGTTGCATTAGGTTTAATAATACAATTAACACTAATGTTGACCCACTATATATATTTGACCAATGACAACACTCCAATTCACGGAGTTTCACAATATGTAACAGATAGTTCTAATCCACCATCATCAACTTGACACTTAATCCCGAACAGAGGGAGTGATAAAATATCGAACAAGACAACATTATAATTGCATGAAACCAAAATGCAAAAAAAAATAAAAAAAATAACACTTGTGAAATAAATTAAAACAAAAACCCAAATTGTGAATTCTGATTAATTCAAAGGTCACATTGGTAGTTCTAACCACACAATCGAAGTGACTAACAATTCCTCATGGAGCGAGTAATAGCATTTCACATTTCCTTCAACAATACATATTGAAAATGAAGGTTGCACAAATCAAGTAAAACAAACCTCTCGGTCTTCCCATCAGAATCCTTAGCCAGATTAACAAGCCAAAGAATAGCATCAAGTATCTGGTTCTTCGAATAACCAGGGGACTGGAGCATCGAATTATTGATTGGGTGAGGACAACCCACACATTCCAGCACCAGAAGTCCAGAACTGTCTCATCCCGAAATAAGACAGATAATAATAAATTAGGCAGAGAAACTACGGTCGAATGCTCTGTTATATATGGGTTTAAACCTTAGGTTTTAGGAGGGTTGATTTGTTATTCGTCTGAAGTGGCTGTATAGCTCGGGCTCCTAGGACTGCATAATTAGGGTGGGAGCGTTATTACATATTTAAATGTACTATGTTTCTTCCTAAAAAATAAAATATGTTGACAATTTGACATAAAATCCTATTTATCAATAATGTTACCTATAGACTAGTTCAACTGTGTACCGATCAGTCCAGTATACCATGTACTAGTGAGCATGCCCGTAACTTGATTTGTGGGGTTAAGCCAACTAGGTTAGGGTGGATAAGTGAAGCTTTTAAGTTCATTGAGAACCTTGTAACATGGCGCTTAAGACGTTATAAAACTTGAGTGAGTTCCAGGGGTGGGGTTAAGCCAATTAGGTTAGGGTGGATAGATGAGGCTTTAAAGTATGTTGTGAGCCTTGTCAAATGGCGCTAAAGACCCGAGTGTGTTTCGAGGGTGGGGGAGTGGGGTTAAGCCAATTAGGTTACGGTGGATAGATGAGGTTGTTAATTTTGTCGTGAAACTTGTAACATGGCGCTTAAGATGTCATAAAACTTGAGTGCGTTCTGTCAACATATGTGGATTGGGGTAACTTGAAGGTAACAAAAGTTACATGGCAGCATGAGTAACTAGTAACAAATATTTGTTCTACTATTCTTTGTTTCCTGTTTTTTTTCCCTTGTACTTTTGCTTGTGTGCTAGTTTTCAACAATTTGATGGTAGTGATCTATTGGTCTTTTTTTCTACCAAGTTCTTTACTTGTCTACCTGTCTCCCCCACCTGTTGGGTTGCTAAAGTGTTGAAGTTTGCAATTAAGGACCTGTTTAGCCAAGCTTCCCGAAAAGAACAGTTTCCTCACTTTTCCAGAAGCTATATTTACATAAATTTTTAGTTGTTTGACCAAACAAATTTAAGAATTGTTTTTAAGAAACAAAAACACTCTTACAGTGTTTGGCCCATTTTTAATGAATTTTTGGCCCTTTTTATTTCTTATTCCTTCGTCTCCCTTCTCCCCTAGCCCTCTCTGTCCCTATTTCAGTAACGACGAGTAATCACTATTGTTTATAAAAAACAATGATGGATTTATCGTACTCACCATTATGAAAAGAAAAATCATGTTATCAAATCCAAATCTGATACCCATCAACACTGTATGTTAGATTTCAACCATTTTATAACTGCAAATAATTGATATTGATTGATGTTACTCACCATATTCAAAGAGAGTGAATATTTGCTGTTAATTTCTAGTATGATTTGTGTGTGAGAGATGTTAGGATGTCCATACTTTTTCTATCAAGGGTATTATTGCCAATATAACTTTTCGTTAAATGGGGCAAAACAGTTCCCAAGAAACCGAAAGTGGAAGCTACAACTTAGATCTTCTGTTTCTAGTGGGCTTGGGATCTTATTTGGGCCATATATCCTTGTCTGGCCATGGCCTTGTTTCTGAATCTATAGGGGAGTATTTGAGTATTTCCCTTCCGAATCTCTCCCAACACTAGAAGGATTTGGCATATTAAAGTTTTGTCCAAACAAGTGAAGAAGAATCCCTCACCTTCTCTTCCCTCCATTTCCCTTCACGTTGCACTAATACAAACAAACTGTAAATCTCTTTGAGACATGTTTGTTTTAGTTCCACAAAACATCTCTTTAGTAAACCTAAAGATTATTTTAGATCCGTGGATTTGTTGGAGTTGAAACATCACCTGAATTGTAGTAGGTTGTCATTCTTTTTTCAAAAAGTTGAGCTGAAAATCTTGATTTTGAGGATGTTGAAGTTGGATATTTTGTTTGAGGTATTTGTAAGTTCTTAATTTCTTGCTAATCACTCACTATTAATGGTTTTGTGCTCAACAGACTCCAAAGGTTTATCCATATGACAACTTGAGGGTAGAGCTTGGCGAAGAACCGTAGATGGATCTGTATTGGGACAATTGTATCAAATGTTATTCAGCTACATGGCCCTCATTTTACATTTTATATTTTATTTCCGTTTGTAACTCTGGGGTTTTGAAAATAAATATCTGACATTGTTGTTAGTTCTGTTGTTTCTAAAATTGGTAAGGGATATGGTTGGTACCTTTTATGGTAATGGTGATGCTGCTTTTTTGTTGTAAATGGCAACTATAAATCTGTAATAAGTTTGTAGATCTTGGGACTGCTTGCTCTAACAACCAAGTATTGATGTAGTGTTTAATACCTCATTCTCCAGTTACCACTAACAAAGCTTAATTTGCTGGAAATCCCACTGGTTCATAGATGGGATGGACTAAAGATACAAATAAATATGGAATGGTGAAGTCTGTGAGACCTGAAGATCATCCCCGC

mRNA sequence

TAGGCAATGAATCTATTTGTAGTCATCTACATTACGTTCTCTTAGCCCATTAACATATGCTCAATCCTTCGGCCTAGGACATGAGAGTTTGACGAACCACCATTTTCAGTGTGTGTGGATCAACAACCGAACTCCCTCGTCAGTCGTCTCGCAAATCAAACCATCGCCGGTGAAAGAGAGAGTGAAATCAAATGGCAGGAAGATTGAGCAAAGTAGCTTCAACGATACTAGGTGGAAACGGCGTCGTTTCCCGTTCTGTGGGTAACTCCCTCCGTCAACGTGCGGGCATGGGCCTTCCCGTCGGCAAGCATCTCGTCCCCAACAAACCGCTTTCGGTGAACGATGAGTTGACATGGGATAACGGTACTCCATTTCCCGAGCCTTGTATCGATCGGATCGCCGACACTGTTGGCAAGTACGAAGCATTAGCTTGGTTGTCCGGTGGACTGAGTTTCTTCGCTTTACTCGGATTGGCCGCCGTCGTGAATGATAAGGCTTCTACATATCCCTTTACTCCAAAGGTTTATCCATATGACAACTTGAGGGTAGAGCTTGGCGAAGAACCGTAGATGGATCTGTATTGGGACAATTGTATCAAATGTTATTCAGCTACATGGCCCTCATTTTACATTTTATATTTTATTTCCGTTTGTAACTCTGGGGTTTTGAAAATAAATATCTGACATTGTTGTTAGTTCTGTTGTTTCTAAAATTGGTAAGGGATATGGTTGGTACCTTTTATGGTAATGGTGATGCTGCTTTTTTGTTGTAAATGGCAACTATAAATCTGTAATAAGTTTGTAGATCTTGGGACTGCTTGCTCTAACAACCAAGTATTGATGTAGTGTTTAATACCTCATTCTCCAGTTACCACTAACAAAGCTTAATTTGCTGGAAATCCCACTGGTTCATAGATGGGATGGACTAAAGATACAAATAAATATGGAATGGTGAAGTCTGTGAGACCTGAAGATCATCCCCGC

Coding sequence (CDS)

ATGGCAGGAAGATTGAGCAAAGTAGCTTCAACGATACTAGGTGGAAACGGCGTCGTTTCCCGTTCTGTGGGTAACTCCCTCCGTCAACGTGCGGGCATGGGCCTTCCCGTCGGCAAGCATCTCGTCCCCAACAAACCGCTTTCGGTGAACGATGAGTTGACATGGGATAACGGTACTCCATTTCCCGAGCCTTGTATCGATCGGATCGCCGACACTGTTGGCAAGTACGAAGCATTAGCTTGGTTGTCCGGTGGACTGAGTTTCTTCGCTTTACTCGGATTGGCCGCCGTCGTGAATGATAAGGCTTCTACATATCCCTTTACTCCAAAGGTTTATCCATATGACAACTTGAGGGTAGAGCTTGGCGAAGAACCGTAG

Protein sequence

MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTPFPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVELGEEP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo26421	Spo26421	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo26421.1	Spo26421.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26421.1.utr5p.1	Spo26421.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26421.1.CDS.4	Spo26421.1.CDS.4	CDS
Spo26421.1.CDS.3	Spo26421.1.CDS.3	CDS
Spo26421.1.CDS.2	Spo26421.1.CDS.2	CDS
Spo26421.1.CDS.1	Spo26421.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26421.1.utr3p.1	Spo26421.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26421.1.exon.4	Spo26421.1.exon.4	exon
Spo26421.1.exon.3	Spo26421.1.exon.3	exon
Spo26421.1.exon.2	Spo26421.1.exon.2	exon
Spo26421.1.exon.1	Spo26421.1.exon.1	exon

Homology

[Close]

BLAST of Spo26421.1 vs. NCBI nr
Match: gi|902227916|gb|KNA20886.1| (hypothetical protein SOVF_048320 [Spinacia oleracea])

HSP 1 Score: 257.3 bits (656), Expect = 1.400e-65
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP
Sbjct: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120

Query: 121 LGEEP 126
           LGEEP
Sbjct: 121 LGEEP 125

[Close]

BLAST of Spo26421.1 vs. NCBI nr
Match: gi|727534013|ref|XP_010441437.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 226.9 bits (577), Expect = 2.000e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQR+GMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRSGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV NDKAST PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAALGLLAVFNDKASTVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. NCBI nr
Match: gi|565435540|ref|XP_006281322.1| (hypothetical protein CARUB_v10027375mg [Capsella rubella])

HSP 1 Score: 226.5 bits (576), Expect = 2.600e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFATLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. NCBI nr
Match: gi|727648870|ref|XP_010494996.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 225.3 bits (573), Expect = 5.800e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQR+GMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRSGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AVVNDKAST PFT +VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAALGLLAVVNDKASTVPFTRRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. NCBI nr
Match: gi|297790901|ref|XP_002863335.1| (hypothetical protein ARALYDRAFT_494216 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 223.4 bits (568), Expect = 2.200e-55
Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMY2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_048320 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.600e-66
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP
Sbjct: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120

Query: 121 LGEEP 126
           LGEEP
Sbjct: 121 LGEEP 125

[Close]

BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: R0GPD3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027375mg PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.800e-56
Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFATLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: D7MP34_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494216 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.500e-55
Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FFA LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFAGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: A0A087GNA9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G102500 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.600e-55
Identity = 107/125 (85.60%), Postives = 113/125 (90.40%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VPNKPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPNKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WL GGL FFA LGL AV NDKAST P+TP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFAALGLLAVFNDKASTVPWTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Match: M5X4A1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013399mg PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.000e-54
Identity = 107/125 (85.60%), Postives = 111/125 (88.80%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVVSRSV +SLR RAGMGLPVGKH+VPN+PL VNDEL WDNGTP
Sbjct: 1   MAGRLSSVASKIMGGNGVVSRSVASSLRLRAGMGLPVGKHIVPNRPLHVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWL GGLSFFA LGL AV NDKAS  PF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. ExPASy Swiss-Prot
Match: NDUB8_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 4.000e-57
Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FF  LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

[Close]

BLAST of Spo26421.1 vs. TAIR (Arabidopsis)
Match: AT5G47570.1 (unknown protein)

HSP 1 Score: 221.9 bits (564), Expect = 2.300e-58
Identity = 107/125 (85.60%), Postives = 114/125 (91.20%), Query Frame = 1


		  
Query: 1   MAGRLSKVASTILGGNGVVSRSVGNSLRQRAGMGLPVGKHLVPNKPLSVNDELTWDNGTP 60
           MAGRLS VAS I+GGNGVV+RSVG+SLRQRAGMGLPVGKH+VP+KPLSVNDEL WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALAWLSGGLSFFALLGLAAVVNDKASTYPFTPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALAWLSGGL FF  LGL AV+NDKAS  PFTP+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGEEP 126
           LG EP
Sbjct: 121 LGGEP 125

The following BLAST results are available for this feature:

BLAST of Spo26421.1 vs. NCBI nr
BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
BLAST of Spo26421.1 vs. ExPASy Swiss-Prot
BLAST of Spo26421.1 vs. TAIR (Arabidopsis)

BLAST of Spo26421.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902227916\|gb\|KNA20886.1\|	1.4e-65	100.	hypothetical protein SOVF_0483...	[more]
gi\|727534013\|ref\|XP_010441437.1\|	2.0e-56	87.2	PREDICTED: NADH dehydrogenase ...	[more]
gi\|565435540\|ref\|XP_006281322.1\|	2.6e-56	87.2	hypothetical protein CARUB_v10...	[more]
gi\|727648870\|ref\|XP_010494996.1\|	5.8e-56	87.2	PREDICTED: NADH dehydrogenase ...	[more]
gi\|297790901\|ref\|XP_002863335.1\|	2.2e-55	86.4	hypothetical protein ARALYDRAF...	[more]

BLAST of Spo26421.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RMY2_SPIOL	9.6e-66	100.	Uncharacterized protein OS=Spi...	[more]
R0GPD3_9BRAS	1.8e-56	87.2	Uncharacterized protein OS=Cap...	[more]
D7MP34_ARALL	1.5e-55	86.4	Putative uncharacterized prote...	[more]
A0A087GNA9_ARAAL	2.6e-55	85.6	Uncharacterized protein OS=Ara...	[more]
M5X4A1_PRUPE	1.0e-54	85.6	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo26421.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
NDUB8_ARATH	4.0e-57	85.6	NADH dehydrogenase [ubiquinone...	[more]

BLAST of Spo26421.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G47570.1	2.3e-58	85.6	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36401	FAMILY NOT NAMED	coord: 2..125 score: 9.8
None	No IPR available	PANTHER	PTHR36401:SF1	NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIAL	coord: 2..125 score: 9.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009853	photorespiration
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I