Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACACCTGCACTGCGGATGATAGGCAAGTCATCTTTTATCCCCTCAAACATTTAATCTAACCAAACAACTCTTAATTCATTCTTTAATCTATTTTTCCTTCTCTTTTAACAGATATTGCAGTTAATTTCACAGGTCAGGCATTTTATCAAACACTTGGTGTTCATTCTCTGCTTCACTAGTTTTAATGCCCTTTCTATTATCTTTTTTCATCTAATTTGATGAAGTTTCTGAATTTTTATAGATGGCATGTTTAAGGGAATTTATCATGGCAAGAATTGCCATATCCCAGATATTCAAGTAGTTTTAAACAGAGCTTGGAATGCTGGAATTGATCGAATAATCGTAATTCATCTCTTTTTGTGATACCTATATTTTGTTTTGAGTTGAAGTCTATGTTGTTGCTCCTAATTTTTCCTGGGTTTGTTGTATTTTGATGAATTGTGATGTATTTACCATTAAATTAATGATTTTTGTGGCAGTAATTCAAGTTTTATTGGGTTTAGGTTACAGGAGGATCTCTCGAGGAGTCGAAAAAAGCTCTAGCAATTGCAGAAACTGATGGTTTGGGCTATGATTTCTTTTAAATTGAATTAAGTTAGTATGAATATAGTAAGTTATGTAATGTTGGTAATTTGAGGTGTTAATCTTTGCAGGAAGGCTATTTTGTACGGTTGGTGTGCATCCAACTAGATGCAATGTATGTATATCAGTGTTTGTTTTACAGTAGTTTTTTTTTCCACATAAAATGACCCTAAATAAGTTAGCTGTTCGAACTTACTAAATGATGATTTGTTGAAAAGAGTTGTGATGCTTGCTTAAGGTAATTTGGACTGATTTATTTGGGTGAATGTTCTGTCGCTTCAAGGAATTTGAAGAAAGCGGCGATCCAGAAAAGCATTTTCAGGAACTTCTATTCCTAGCTAAGGAGGGAGTCGAGAAGGGAAAGGTAGGGATCATTTATAAAAATCTGAAATTTTATTTGGGTTACTGGTGAGTATCTGATTGTGGAACTTGATCATCTGTTTATCTTATTGGGAGTTGCTAGTTTCTTTTGGTGCTTTATATTTTCTGTTATTCATTTTGCACTGGACTTGCCGCACCATTCAAGAATACTAAGACCACCTTAAGTATTTTGCTTCAATCTTGAATTGATTTATTTTGCTAATATGAACTAATGCTATGTTCATGTAATTGAATTATATGTTGGTTTCATCAATTGAACTCTACCTTAAGAATATTGTGTCGGTCATTAAACAAAATCCCCATTTTCTATGAGCAATCAAATGAGCATTCTGTCCTTGTACTGCTGCTATGTTCATCAATGTCTTCTCAACAGTGAGATGATTACATGTATCCAAAGAACATTATATACAGTAGACGAAGCTTTCTGTTTTTCTTGATGCTACTGTGCTAGTAGTTGCTGTCACATGAACTTTTACTAATATGAGACATGTAGCTCAATTGACAAAGTTTCGTCATGTGCGCTGAGATATAATACTATAATAATCTATGCATGTCATCAGCAGAATTAATTAGCTAGATGAGATCATATAAATAGCAACATATCCTTCTTTTTAGTCCATTTTTCTCCATTGTAGCAGTCATTTCCAGTTCGACTTTGTTACAGAAGTGATATGATATAGAAAATCACTAACGCTGACCCTTTTACTGGTCATTTTTTTTTTTTTTTTGGTATGATACTATTTCCTATGTAACTAATCAACAAACAATTAGGTCATGGCCCTCATGGCTGCTTTTATGGCATACTCTGTATTGCATGAAAAGCTCCATATGTGATTAATGAATTGGAGTCAATCTTACTTTCATCCTAACCACCTTTTGTGATTTTATCTTGTCCATTTCCTGTTTTAACATTATACATGGTTATTCACTTCTTCCCTTTGATACATTGGGATGCTGGTTTTTTGGATTGACGTTTTATTCTTACAGTATTCAAATGTTTTTGTGCTTGATATTTATGATTTACTATTTAAGGTAGGTTGTGGCGATAGGTGAATGTGGACTGGACTATGACAGACTTCAGTTTTGTCAAGTTGATATCCAAAAGAAGTATGTATTTCTATTTAATCCTTACTGCCATTGGTTTTCTTTCTCTACTTATCATTGGTTTAGTCACGTGAAAATGTCTGTGGTCCTAGGTATTTTGAGAAACAATTCGAATTGGCATATGCTATGAAGCTGCCAATGTTCCTGCATATGCGTGAAGCTGCAGCAGATTTCTGTGATATTCTTGATCGCAATAAAAGCAGGTACATCGATATCCTCGTGCCTTTCATGTAATATTTTGTCCGATCTTACTTTATATTATTGCCTGTATCTCAAATTCCAGATATAGCATTTAAGTGGCTGCTGCGGCCCTAGTAAAACACATTATTGTCTATGATCCTGCAAAATTGTATGTGAAAAGTAATAGAAAGAAACACCTGAACATCGATTGTTTGTTAGTAAGCAATAATATTTGGTGGTAGAAAGAATCTATATTTAATTTTGTATGGAGAGTCTCATGCTATTGTCCATGGGAGTGCTTCTCCACCTCAAATTATTTTATTTTTTTAATTGATTTTCATTGCCATCCATGACCACTTTAGAGGTGCTGTTGAGTGGTAATGGAAAAATGAGAAGAGTAACACATGTTTGGGTTGGACTTCCATTACCAACTTACCATTAACATTGGCATGCGACCCTCTGTACAAAAATGCGTATTAATTCGTTACCATTACTTTTATTTAGTAACGCCTTCCAAACAGGCAGTGAAAGCCATACTGATCAAAATAAGATGACCATTAGAAGACAGTGTGCTAAAGAAGTTTGATTTTAAATGTGTCATTTTGGATTGCTGCATTGCTCTCCTCCATTAAACTCTTAACTCGGATGTCAGTAATAATCAGTATCTCAAATGCCGCTCTCAGCTGTATATCACTGATATCTTAGTTTCTATTTTCTTCAGTTCAAACTTTCCATGTCTATAGTACGGTTTCAAATTAGTCGAGTTTGTAAGAGAACTCCTGTTCACTTACTAGCCTTTGAGTTGAGCTGAAATTTTCAAGGTTAAGGCTAGGCGAAAATCTTATTGTAATTAGGATGGACCAATATCAGTTTGTGAACCTGAACATACCAACAATACAGCAATACTCAACTCATTTGTACCCCTACTGAGTACTGACAAACTTTCTTTGGCTGTGATCATCAACCTGGTGGTAATTATGTCGTATGTCGCAAATTTAGAATCAACTTACAATATGTCTTTCCACTTACAACAATTCATATCCTAAACCTGGATAATAGCAATCTTACTGGTTTTTTATTATAAGATTATTGAAATTGGATCACGAGTAATAACTTTCGTAAGGTAGTGAGAACTCTGAGAAGAGTACTTAGACCAAGGATGTGATACTGGAAGGAGTTTTGTTGTATTCTGTATGGCAATTTTTGGAAATATAACATGACTGTATTTAAGATGATTGCAGATGTCTATGTTCTCTTTAGATGCAGCAATTTGATATCACTGCCACATTCTTGGTTTTCAGATTTTTATCTGGAGTTGCTCATTCTTTTACTGGAAGTGCAGAAGATCGTGATAAACTACTTTCTTTCAGTAATATGTACATTGGTAAATACACTTATTTCCCAAGCAAGCTTCTATTATATTTCTATTTCTGTATTAGGCAGTAGTAGGTCAAAGTTGTGGATTTAACCAACAGTATATTGATACGATGAGAAAAATGATCGATGGCTGAATACTTTTCCGTCGTTGACTAATTAAAAGAGCCAAAAAAAGAATTCCAGGGGTCGTTTTTTGGACCTTTTCTGTCGGTGCATGTCAAATTGTCAATTAAATTTCCTGAAAGAATAAATAATGGGCTCTTGAACAATTAAGGAAAAGGGGTGGCCTGTTGCGGAAAGAAACCGGTAAAATCTGCTACTCCTATATCCCGCTGATGCTCAACTACTGAAAAAGTGAAAACTAATAGGTTTTAGTTTGGAACAACACAAATTTGTACTTAACATTGCCAATGTATTGAAGGGTATTACATCGTTGCTCTTCTATACTGCCCAGTTTCTATTTCAATGTTCCAAAGTTCTAAATCTTATTTCTTCATGCAATTGTTTGTGTTTGAAATCCGGAAGCCCTTTCCTTCTACTAGATAAATGCTTGGATGTGGTTGAAGTTGCTGAGTATATAAAACTGTGGTAATTATTTACTCTTTTAGCTATGGAAAATATGATCCTTTTGCTCAGTAAGTCATATGAGTTTTAATAATTCCTTTCCATGTATGATTATTAGCTTCAAGCAGAATCCTGACCTGTGGTTCTTTTCTCTTATTACTGTTACAAACAGGACTCAATGGCTGCTCTCTGAAGACGGCTGAGAATCTGGAGGTGGTGAAGGGAATACCTGTTGAGAGGATGATGATTGAAACAGATTCACCGTACTGTGAGATTAAGAACACTCATGCAGGGATTAAAATGGTTAAGTCAACTTGGCCATCTAAAAAGAAAGAGAAATATGATCCAGAGTGCCTTGTCAAAGGGAGAAATGAACCCTGCTTAGTTCGGTTAGTTTAATTTATTCTCAAGTTACAACTTCGTGTGGCATTTCTTCTTTTGAATTTCTGCGACTGCTTTAGACTGGTTTTGTGCTGAACTCCTGATGCATCATTGTCATATAATTTTGTTTTCTTGGCATTGTTTCTGAATCAGAAATGTTCAAAATACAAAAATTAATGTGGACAAATATTCGAAACGGTAACACGTTGATTTTGTCCTGAGTTTTTATGTGATAAAAGATGTAGCATCTTCTTCGAATGATGTTGCTAACACGATCTAGCTCCCAAATAGGAAACGGTGTGGGGTGCGGGTTGTCTCGTTGGATAATCATATAAATTCTGGCTTGTGGTGTACGCATGATTATGGTTTAGAATTTCTCGTCATATGAAATTTTGTTTGAAGAAGCATAGAGCACAAGTTCACTGCCGATTTAGTGTCCAGTGTACTGCTTCTATGCATCATGAACCACCATATCATTCAAGTTTGGAATGAGTGTTTGTTTTAGGCACCCTTTGGCTAGTGAGTTATGTAAATACTCAGAGGCTGTTTAATCATACTAGTTTCTTTAACTCGCTTATCATAGTCTCGATTTATATTCCTACTTTTTTTTTAAATCATGTATTTTTGTTGCTTGTGATCGATATTCTTTCTTGTGGTTTGTGATATATTTCTTTCTGGTTATTGTTATGTTCAGTTATGAGTCTGATGAGACACCTTTGAACTGTAGGCAAGTCCTCGAGGTGGTTGCTGGCTGCAAGGGTATTGCTGACATAAATCAGCTGAGTCAGGATGTGTACCACAATACTTGCAGGTAAATTCATGGGCATTCATTCATTCATTCATTCATGCTTTTATTACTTTCTTTATGGGAATTATTTAAATTTATTTTATTTGGTGTTCTAGAGTTAATCGGATAGTTTCCACAGGCATTAGCACGCTTATAGCTGCACAAGTATGTATACAACAAAAGAGTATTTATTACAGAGTACTCTGTATGGGGTCAAAATCCTCGATCCCACAATTTATGCACCACTTATGTGTCACTTCTGCCTATTGGTTGATTTTGTAAGTTAATCAACCACTTTTATTTTCATATCCAAAATAATATTAATATTAACCAATGGAATGAAGTAGCACACAAATGGTATATGGATTGAGGGACAGAAGATTCGGACTCCTATGTGCTAATGAGCTACATTTCTGGTAACACATACATGCCCTAGAATGTAATTCTAAATCCATTCTGTTATACGGTGCAGGGTCTTTTTTCCTCATGATTTGGACTCTGCTGCTGATGCTCTACTCACTGGTAAAGAGAACCAGTAA ATGGCTACACCTGCACTGCGGATGATAGATATTGCAGTTAATTTCACAGATGGCATGTTTAAGGGAATTTATCATGGCAAGAATTGCCATATCCCAGATATTCAAGTAGTTTTAAACAGAGCTTGGAATGCTGGAATTGATCGAATAATCGTTACAGGAGGATCTCTCGAGGAGTCGAAAAAAGCTCTAGCAATTGCAGAAACTGATGGAAGGCTATTTTGTACGGTTGGTGTGCATCCAACTAGATGCAATGAATTTGAAGAAAGCGGCGATCCAGAAAAGCATTTTCAGGAACTTCTATTCCTAGCTAAGGAGGGAGTCGAGAAGGGAAAGGTTGTGGCGATAGGTGAATGTGGACTGGACTATGACAGACTTCAGTTTTGTCAAGTTGATATCCAAAAGAAGTATTTTGAGAAACAATTCGAATTGGCATATGCTATGAAGCTGCCAATGTTCCTGCATATGCGTGAAGCTGCAGCAGATTTCTGTGATATTCTTGATCGCAATAAAAGCAGATTTTTATCTGGAGTTGCTCATTCTTTTACTGGAAGTGCAGAAGATCGTGATAAACTACTTTCTTTCAGTAATATGTACATTGGACTCAATGGCTGCTCTCTGAAGACGGCTGAGAATCTGGAGGTGGTGAAGGGAATACCTGTTGAGAGGATGATGATTGAAACAGATTCACCGTACTGTGAGATTAAGAACACTCATGCAGGGATTAAAATGGTTAAGTCAACTTGGCCATCTAAAAAGAAAGAGAAATATGATCCAGAGTGCCTTGTCAAAGGGAGAAATGAACCCTGCTTAGTTCGGCAAGTCCTCGAGGTGGTTGCTGGCTGCAAGGGTATTGCTGACATAAATCAGCTGAGTCAGGATGTGTACCACAATACTTGCAGGGTCTTTTTTCCTCATGATTTGGACTCTGCTGCTGATGCTCTACTCACTGGTAAAGAGAACCAGTAA ATGGCTACACCTGCACTGCGGATGATAGATATTGCAGTTAATTTCACAGATGGCATGTTTAAGGGAATTTATCATGGCAAGAATTGCCATATCCCAGATATTCAAGTAGTTTTAAACAGAGCTTGGAATGCTGGAATTGATCGAATAATCGTTACAGGAGGATCTCTCGAGGAGTCGAAAAAAGCTCTAGCAATTGCAGAAACTGATGGAAGGCTATTTTGTACGGTTGGTGTGCATCCAACTAGATGCAATGAATTTGAAGAAAGCGGCGATCCAGAAAAGCATTTTCAGGAACTTCTATTCCTAGCTAAGGAGGGAGTCGAGAAGGGAAAGGTTGTGGCGATAGGTGAATGTGGACTGGACTATGACAGACTTCAGTTTTGTCAAGTTGATATCCAAAAGAAGTATTTTGAGAAACAATTCGAATTGGCATATGCTATGAAGCTGCCAATGTTCCTGCATATGCGTGAAGCTGCAGCAGATTTCTGTGATATTCTTGATCGCAATAAAAGCAGATTTTTATCTGGAGTTGCTCATTCTTTTACTGGAAGTGCAGAAGATCGTGATAAACTACTTTCTTTCAGTAATATGTACATTGGACTCAATGGCTGCTCTCTGAAGACGGCTGAGAATCTGGAGGTGGTGAAGGGAATACCTGTTGAGAGGATGATGATTGAAACAGATTCACCGTACTGTGAGATTAAGAACACTCATGCAGGGATTAAAATGGTTAAGTCAACTTGGCCATCTAAAAAGAAAGAGAAATATGATCCAGAGTGCCTTGTCAAAGGGAGAAATGAACCCTGCTTAGTTCGGCAAGTCCTCGAGGTGGTTGCTGGCTGCAAGGGTATTGCTGACATAAATCAGCTGAGTCAGGATGTGTACCACAATACTTGCAGGGTCTTTTTTCCTCATGATTTGGACTCTGCTGCTGATGCTCTACTCACTGGTAAAGAGAACCAGTAA MATPALRMIDIAVNFTDGMFKGIYHGKNCHIPDIQVVLNRAWNAGIDRIIVTGGSLEESKKALAIAETDGRLFCTVGVHPTRCNEFEESGDPEKHFQELLFLAKEGVEKGKVVAIGECGLDYDRLQFCQVDIQKKYFEKQFELAYAMKLPMFLHMREAAADFCDILDRNKSRFLSGVAHSFTGSAEDRDKLLSFSNMYIGLNGCSLKTAENLEVVKGIPVERMMIETDSPYCEIKNTHAGIKMVKSTWPSKKKEKYDPECLVKGRNEPCLVRQVLEVVAGCKGIADINQLSQDVYHNTCRVFFPHDLDSAADALLTGKENQ Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo26815.1 vs. NCBI nr
Match: gi|902238087|gb|KNA25038.1| (hypothetical protein SOVF_010040 isoform A [Spinacia oleracea]) HSP 1 Score: 666.4 bits (1718), Expect = 2.500e-188 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo26815.1 vs. NCBI nr
Match: gi|731333099|ref|XP_010677551.1| (PREDICTED: putative deoxyribonuclease TATDN1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 607.8 bits (1566), Expect = 1.100e-170 Identity = 289/316 (91.46%), Postives = 302/316 (95.57%), Query Frame = 1
BLAST of Spo26815.1 vs. NCBI nr
Match: gi|922474893|ref|XP_013636219.1| (PREDICTED: putative deoxyribonuclease TATDN1 [Brassica oleracea var. oleracea]) HSP 1 Score: 572.8 bits (1475), Expect = 3.800e-160 Identity = 268/316 (84.81%), Postives = 292/316 (92.41%), Query Frame = 1
BLAST of Spo26815.1 vs. NCBI nr
Match: gi|685297298|ref|XP_009139463.1| (PREDICTED: putative deoxyribonuclease TATDN1 isoform X2 [Brassica rapa]) HSP 1 Score: 572.4 bits (1474), Expect = 5.000e-160 Identity = 267/316 (84.49%), Postives = 292/316 (92.41%), Query Frame = 1
BLAST of Spo26815.1 vs. NCBI nr
Match: gi|79442300|ref|NP_190807.3| (TatD related DNase [Arabidopsis thaliana]) HSP 1 Score: 571.6 bits (1472), Expect = 8.500e-160 Identity = 267/313 (85.30%), Postives = 291/313 (92.97%), Query Frame = 1
BLAST of Spo26815.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RZZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_010040 PE=4 SV=1) HSP 1 Score: 666.4 bits (1718), Expect = 1.800e-188 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 1
BLAST of Spo26815.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F6H3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g108630 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 7.500e-171 Identity = 289/316 (91.46%), Postives = 302/316 (95.57%), Query Frame = 1
BLAST of Spo26815.1 vs. UniProtKB/TrEMBL
Match: Q84TD7_ARATH (At3g52390 OS=Arabidopsis thaliana GN=At3g52390 PE=2 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 5.900e-160 Identity = 267/313 (85.30%), Postives = 291/313 (92.97%), Query Frame = 1
BLAST of Spo26815.1 vs. UniProtKB/TrEMBL
Match: A0A0D3BYI8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 568.5 bits (1464), Expect = 5.000e-159 Identity = 266/313 (84.98%), Postives = 289/313 (92.33%), Query Frame = 1
BLAST of Spo26815.1 vs. UniProtKB/TrEMBL
Match: F4J6X3_ARATH (TatD related DNase OS=Arabidopsis thaliana GN=At3g52390 PE=4 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 2.500e-158 Identity = 267/316 (84.49%), Postives = 291/316 (92.09%), Query Frame = 1
BLAST of Spo26815.1 vs. ExPASy Swiss-Prot
Match: TATD1_XENLA (Putative deoxyribonuclease TATDN1 OS=Xenopus laevis GN=tatdn1 PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 1.100e-85 Identity = 150/298 (50.34%), Postives = 216/298 (72.48%), Query Frame = 1
BLAST of Spo26815.1 vs. ExPASy Swiss-Prot
Match: TATD1_BOVIN (Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 5.300e-85 Identity = 156/298 (52.35%), Postives = 213/298 (71.48%), Query Frame = 1
BLAST of Spo26815.1 vs. ExPASy Swiss-Prot
Match: TATD1_HUMAN (Putative deoxyribonuclease TATDN1 OS=Homo sapiens GN=TATDN1 PE=1 SV=2) HSP 1 Score: 314.3 bits (804), Expect = 1.500e-84 Identity = 154/298 (51.68%), Postives = 213/298 (71.48%), Query Frame = 1
BLAST of Spo26815.1 vs. ExPASy Swiss-Prot
Match: TATD1_MOUSE (Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=1 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 4.200e-82 Identity = 152/297 (51.18%), Postives = 210/297 (70.71%), Query Frame = 1
BLAST of Spo26815.1 vs. ExPASy Swiss-Prot
Match: TATD1_DANRE (Putative deoxyribonuclease TATDN1 OS=Danio rerio GN=tatdn1 PE=2 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 1.300e-80 Identity = 149/297 (50.17%), Postives = 205/297 (69.02%), Query Frame = 1
BLAST of Spo26815.1 vs. TAIR (Arabidopsis)
Match: AT3G52390.2 (TatD related DNase) HSP 1 Score: 566.2 bits (1458), Expect = 1.300e-161 Identity = 267/316 (84.49%), Postives = 291/316 (92.09%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26815.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26815.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26815.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26815.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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